RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42 (Homo sapiens)

Ensembl gene IDs: ENSG00000070831

Ensembl transcript IDs: ENST00000315554.13, ENST00000400259.5, ENST00000498236.1, ENST00000648594.1, ENST00000652582.1, ENST00000656825.1, ENST00000662562.1, ENST00000667384.1

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGTGGCCTGGGCAGTGGCCCAGATACCCATCAGGGGTTCCAACTaGCCACCTGCACCGCGGCACAGGCACACAGAATACAGTGAGTGG +
Preference number: 1 (lower is better)
Translates to: CVAWAVAQIPIRGSN*PPAPRHRHTEYSEW
Trigger: CCACTCACTGTATTCTGTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAACCCCTGATGGGTATCTGGGCCACTGCCCAGGCCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp AAGGGAGCCAGGTTGCAGAGCTGGCTCCAAGCCTCCCTCAGACCTTaGGTATTCACTAAGGTGCAACTTTCTCACCAAACAAACCCTGCT +
Preference number: 1 (lower is better)
Translates to: KGARLQSWLQASLRP*VFTKVQLSHQTNPA
Trigger: AGCAGGGTTTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCTCTGCAACCTGGCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp TTCCAACTGACCACCTGCACCGCGGCACAGGCACACAGAATACAGTaGGTGGATGAAGCACCCTGTAGGCTATTGAGACCAAAGTCCTTA +
Preference number: 1 (lower is better)
Translates to: FQLTTCTAAQAHRIQ*VDEAPCRLLRPKSL
Trigger: TAAGGACTTTGGTCTCAATAGCCTACAGGGTGCTTCATCCACTCACTGTATTCTGTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 90 bp AGAGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTaGAACTTTCTCACCAAACAAACCCTGCTCTTCCCAACTCACAGG +
Preference number: 1 (lower is better)
Translates to: RAGSKPPSDLGYSLR*NFLTKQTLLFPTHR
Trigger: CCTGTGAGTTGGGAAGAGCAGGGTTTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AGGCACACAGAATACAGTGAGTGGATGAAGCACCCTGTAGGCTATTaGGACCAAAGTCCTTACCTCTGCCTGCTTACATCTCTGCACTGC +
Preference number: 1 (lower is better)
Translates to: RHTEYSEWMKHPVGY*DQSPYLCLLTSLHC
Trigger: GCAGTGCAGAGATGTAAGCAGGCAGAGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTGCTTCATCCACTCACTGTATTCTGTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 90 bp CTGAGACAAGTGATCCACAGTTCACACCGAGAAAAAGCACTGCTCTaGGGGACGCATCAGAGCAAACAGAACAGTTATGATCCTGTGCTC +
Preference number: 1 (lower is better)
Translates to: LRQVIHSSHREKALL*GTHQSKQNSYDPVL
Trigger: GAGCACAGGATCATAACTGTTCTGTTTGCTCTGATGCGTCCCGCAGAGCAGTGCTTTTTCTCGGTGTGAACTGTGGATCACTTGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp CCTTACTCTACTCCTGGCAATGAGTATGAGGAGGAAGCCCCTCACTaGTACAGCAGTTTAAGACCCAGAAGTCAACAGGGTTTTCTGGTC +
Preference number: 1 (lower is better)
Translates to: PYSTPGNEYEEEAPH*YSSLRPRSQQGFLV
Trigger: GACCAGAAAACCCTGTTGACTTCTGGGTCTTAAACTGCTGTATCAGTGAGGGGCTTCCTCCTCATACTCATTGCCAGGAGTAGAGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp ACAAACTCAGCACCCTCCAGTAAAGTCATTCTTACAAGAAGCCAGTaGAGAATTCACAGGTGCCTGCCCACCCTTCACAAGCTGCCAAGA +
Preference number: 1 (lower is better)
Translates to: TNSAPSSKVILTRSQ*RIHRCLPTLHKLPR
Trigger: TCTTGGCAGCTTGTGAAGGGTGGGCAGGCACCTGTGAATTCTTCACTGGCTTCTTGTAAGAATGACTTTACTGGAGGGTGCTGAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp TTACACCTCAGCCAGAAACTCCAACATGACAGTGTGACTCAGCATTaGTGGTACTTAGGACCCAGGTCTACAGACTCACCTAAAATCACC +
Preference number: 1 (lower is better)
Translates to: LHLSQKLQHDSVTQH*WYLGPRSTDSPKIT
Trigger: GGTGATTTTAGGTGAGTCTGTAGACCTGGGTCCTAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGGCTGAGGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR GCA 90 bp TTACAAGTCGTTCATAAAGTATCTTTGGAAGGGCCTTTTCTAATTTaGACAAAGGCTCTGTGTGGCCTGGGCAGTGGCCCAGATACCCAT +
Preference number: 1 (lower is better)
Translates to: LQVVHKVSLEGPFLI*TKALCGLGSGPDTH
Trigger: ATGGGTATCTGGGCCACTGCCCAGGCCACACAGAGCCTTTGTGCAAATTAGAAAAGGCCCTTCCAAAGATACTTTATGAACGACTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp GAAACTCATTTTATTGAGATGAGGAAACCAAGGCCCAAAAAGGTATaGCAACTTGCCCAAGGAAACTCTGGTGCCTCAACTAGAACCTGG +
Preference number: 1 (lower is better)
Translates to: ETHFIEMRKPRPKKV*QLAQGNSGASTRTW
Trigger: CCAGGTTCTAGTTGAGGCACCAGAGTTTCCTTGGGCAAGTTGCCATACCTTTTTGGGCCTTGGTTTCCTCATCTCAATAAAATGAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp TTAAGATACAGAAATACACTTACACCTCAGCCAGAAACTCCAACATaGCAGTGTGACTCAGCATTGGTGGTACTTAGGACCCAGGTCTAC +
Preference number: 1 (lower is better)
Translates to: LRYRNTLTPQPETPT*QCDSALVVLRTQVY
Trigger: GTAGACCTGGGTCCTAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGGCTGAGGTGTAAGTGTATTTCTGTATCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 90 bp CCAACAATGCCAAGTTGTTTCGCCTCAGTTTTACCATTTGACAAATaGCATCATCCATCCCTGCCTCTTTTACAGAGTTGTACTGAGGTC +
Preference number: 1 (lower is better)
Translates to: PTMPSCFASVLPFDK*HHPSLPLLQSCTEV
Trigger: GACCTCAGTACAACTCTGTAAAAGAGGCAGGGATGGATGATGTCATTTGTCAAATGGTAAAACTGAGGCGAAACAACTTGGCATTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 90 bp TGCTCTGCGGGACGCATCAGAGCAAACAGAACAGTTATGATCCTGTaGTCTATTGTAATAGGGTTGAGAAAATGCTATACTTACCTTAGC +
Preference number: 1 (lower is better)
Translates to: CSAGRIRANRTVMIL*SIVIGLRKCYTYLS
Trigger: GCTAAGGTAAGTATAGCATTTTCTCAACCCTATTACAATAGAGCACAGGATCATAACTGTTCTGTTTGCTCTGATGCGTCCCGCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 90 bp TACCCAACAAACCTACCCTTACAGATGAAGCCTTTTATGCTGCTTTaGTTGCCCTGTGCACTATATGATGCTTCAACTACGATTTTCAGC +
Preference number: 1 (lower is better)
Translates to: YPTNLPLQMKPFMLL*LPCALYDASTTIFS
Trigger: GCTGAAAATCGTAGTTGAAGCATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAGGTTTGTTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp TTGTCAAAAACCTCATTCCAAGATGTAGGGCATACTTCACCAAATTaGGACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTGCCTC +
Preference number: 1 (lower is better)
Translates to: LSKTSFQDVGHTSPN*DHHSLESCLLEFCL
Trigger: GAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGCCCTACATCTTGGAATGAGGTTTTTGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR GCA 90 bp CAACTCTGGCTGCATATACCAAGCAATTATGATGTCTCAGAGTCCTaGTCCATAAAAAGAAGATACCTGTACTATCAACCTCAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: QLWLHIPSNYDVSES*SIKRRYLYYQPQSC
Trigger: ACAGCTCTGAGGTTGATAGTACAGGTATCTTCTTTTTATGGAGCAGGACTCTGAGACATCATAATTGCTTGGTATATGCAGCCAGAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp GCTAAGAACCTCACATATAGCAATTCATGTCACTCTCACAACTCTTaGGCAAAGTACAGCTATTTCCACTTCACAGAGAATGCAACACTC +
Preference number: 1 (lower is better)
Translates to: AKNLTYSNSCHSHNS*AKYSYFHFTENATL
Trigger: GAGTGTTGCATTCTCTGTGAAGTGGAAATAGCTGTACTTTGCCCAAGAGTTGTGAGAGTGACATGAATTGCTATATGTGAGGTTCTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AGTTTACCCATTCTGTTCCAAGCTAGTTCTAATGCACAAATTACCTaGTGGCAGCAAAACAAGAAGTGCAGGGAGATTCTAGGAGAAACT +
Preference number: 1 (lower is better)
Translates to: SLPILFQASSNAQIT*WQQNKKCREILGET
Trigger: AGTTTCTCCTAGAATCTCCCTGCACTTCTTGTTTTGCTGCCATCAGGTAATTTGTGCATTAGAACTAGCTTGGAACAGAATGGGTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AGAGGATTAGAAAGACTAGCAGGTACAACAGCAGTCCGGATTAAATaGGCTGAATTCACAGAAGCAATGTGCCTTAAGAAAAACGCTAGA +
Preference number: 1 (lower is better)
Translates to: RGLERLAGTTAVRIK*AEFTEAMCLKKNAR
Trigger: TCTAGCGTTTTTCTTAAGGCACATTGCTTCTGTGAATTCAGCTCATTTAATCCGGACTGCTGTTGTACCTGCTAGTCTTTCTAATCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR GCA 90 bp ACTCAAATCCAAAGCCTATGCATGTACTTCGCACAACACCAACAATaGCAAGTTGTTTCGCCTCAGTTTTACCATTTGACAAATGACATC +
Preference number: 1 (lower is better)
Translates to: TQIQSLCMYFAQHQQ*QVVSPQFYHLTNDI
Trigger: GATGTCATTTGTCAAATGGTAAAACTGAGGCGAAACAACTTGGCATTGTTGGTGTTGTGCGAAGTACATGCATAGGCTTTGGATTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp GAGCTTCCTGAACACTGCTTCACTAAGAATTATTATGGACCTACTTaGTATTTAAGGGAAGGGTCAAACTTAGAGGAGAAAGCACAAACC +
Preference number: 1 (lower is better)
Translates to: ELPEHCFTKNYYGPT*YLREGSNLEEKAQT
Trigger: GGTTTGTGCTTTCTCCTCTAAGTTTGACCCTTCCCTTAAATACCAAGTAGGTCCATAATAATTCTTAGTGAAGCAGTGTTCAGGAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp GTCCAGTGCTTTAAGATGTCTGCATGGGTATCAGAGCATAAAGCATaGAGTGAAAACGAAGAATATTCTCAGATCTTACGGGGATTAAGA +
Preference number: 1 (lower is better)
Translates to: VQCFKMSAWVSEHKA*SENEEYSQILRGLR
Trigger: TCTTAATCCCCGTAAGATCTGAGAATATTCTTCGTTTTCACTCCATGCTTTATGCTCTGATACCCATGCAGACATCTTAAAGCACTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 90 bp TATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTAGTAGTTTaGGATAACCAACTAGGTGTGGTGATTCCCAAACTTGGCTACATT +
Preference number: 1 (lower is better)
Translates to: YSDSQHRTCILIVVV*DNQLGVVIPKLGYI
Trigger: AATGTAGCCAAGTTTGGGAATCACCACACCTAGTTGGTTATCTCAAACTACTACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AGACAGATAGGATTTCCAACTCTGGCTGCATATACCAAGCAATTATaGTGTCTCAGAGTCCTGCTCCATAAAAAGAAGATACCTGTACTA +
Preference number: 1 (lower is better)
Translates to: RQIGFPTLAAYTKQL*CLRVLLHKKKIPVL
Trigger: TAGTACAGGTATCTTCTTTTTATGGAGCAGGACTCTGAGACATCATAATTGCTTGGTATATGCAGCCAGAGTTGGAAATCCTATCTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp GCTTATCTGAACCTTTCCTGTAAGGTTTTTGTTTTAACACAACCCTaGCCACTACGAATCATTCAGTACAATACGAGAGCTTACCAACAC +
Preference number: 1 (lower is better)
Translates to: AYLNLSCKVFVLTQP*PLRIIQYNTRAYQH
Trigger: GTGTTGGTAAGCTCTCGTATTGTACTGAATGATTCGTAGTGGTCAGGGTTGTGTTAAAACAAAAACCTTACAGGAAAGGTTCAGATAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR GCA 90 bp GTTTCGCCTCAGTTTTACCATTTGACAAATGACATCATCCATCCCTaGCTCTTTTACAGAGTTGTACTGAGGTCAAGTGAAATCACTAAT +
Preference number: 1 (lower is better)
Translates to: VSPQFYHLTNDIIHP*LFYRVVLRSSEITN
Trigger: ATTAGTGATTTCACTTGACCTCAGTACAACTCTGTAAAAGAGGCAGGGATGGATGATGTCATTTGTCAAATGGTAAAACTGAGGCGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AAGAACATACAATATGAAGCTGTTCATATTCTTGCTGGGCATCTTTaGGCACTGCTGATCACTGTTAGAAATAACTCCTGTATCCTAATG +
Preference number: 1 (lower is better)
Translates to: KNIQYEAVHILAGHL*ALLITVRNNSCILM
Trigger: CATTAGGATACAGGAGTTATTTCTAACAGTGATCAGCAGTGCTCAAAGATGCCCAGCAAGAATATGAACAGCTTCATATTGTATGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 90 bp AGTCCCATTCCAAATACCCTAACATTGCTCCCTATCTTCAAAATCTaGGTTTCCCATCAAACTACAAAAGGAGTTCCAATTAAATCACTC +
Preference number: 1 (lower is better)
Translates to: SPIPNTLTLLPIFKI*VSHQTTKGVPIKSL
Trigger: GAGTGATTTAATTGGAACTCCTTTTGTAGTTTGATGGGAAACTCAGATTTTGAAGATAGGGAGCAATGTTAGGGTATTTGGAATGGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 90 bp AACTTTTACATTACTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATaGCATAGTTATTCAAGAGAAAGCAGCTATCAAAACTGTAAGGGA +
Preference number: 1 (lower is better)
Translates to: NFYITLLGAMQSGKR*HSYSRESSYQNCKG
Trigger: TCCCTTACAGTTTTGATAGCTGCTTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAGTAATGTAAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 90 bp TATGCATGCACAGATAAAACTTTTACATTACTCTCTTGGGAGCAATaGAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: YACTDKTFTLLSWEQ*KVERDDIVIQEKAA
Trigger: AGCTGCTTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAGTAATGTAAAAGTTTTATCTGTGCATGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp AACTTTTTCAAAGTTTCAAAAAGGTTCTATCACCAAGGTGTGCACTaGTCCCTAAACATAGCTCAACAAAGTTCTATCTGGGAATCTTTT +
Preference number: 1 (lower is better)
Translates to: NFFKVSKRFYHQGVH*SLNIAQQSSIWESF
Trigger: AAAAGATTCCCAGATAGAACTTTGTTGAGCTATGTTTAGGGACCAGTGCACACCTTGGTGATAGAACCTTTTTGAAACTTTGAAAAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 90 bp AGAGATGGACCTAACTCCTTAACACCAATAATTCCAATACAATTGTaGAATCCTCAAGTTATGGAGAAAAAGGAGCATTTCTTTAAGAGC +
Preference number: 1 (lower is better)
Translates to: RDGPNSLTPIIPIQL*NPQVMEKKEHFFKS
Trigger: GCTCTTAAAGAAATGCTCCTTTTTCTCCATAACTTGAGGATTTCACAATTGTATTGGAATTATTGGTGTTAAGGAGTTAGGTCCATCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 90 bp TGTCATGAATATGCATGCACAGATAAAACTTTTACATTACTCTCTTaGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAG +
Preference number: 1 (lower is better)
Translates to: CHEYACTDKTFTLLS*EQCKVERDDIVIQE
Trigger: CTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAGTAATGTAAAAGTTTTATCTGTGCATGCATATTCATGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp GAAGCAGGGCCCCCAGCCACTCTGCAAACATGCCTGGGCCCTCCTTaGTTCACATTCCCTCCACTCAGAAATCCATACCCAGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: EAGPPATLQTCLGPP*FTFPPLRNPYPAGH
Trigger: GTGCCCAGCTGGGTATGGATTTCTGAGTGGAGGGAATGTGAACAAAGGAGGGCCCAGGCATGTTTGCAGAGTGGCTGGGGGCCCTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGATCAGGGGTTCCAACTaGCCACCTGCACCGCGGCAC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLIRGSN*PPAPRH
Trigger: GTGCCGCGGTGCAGGTGGTCAGTTGGAACCCCTGAT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGGCGGGAGGATCGCTTaGGCTGGGGAGGTCAAGGAT +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLGGRIA*AGEVKD
Trigger: ATCCTTGACCTCCCCAGCTCAAGCGATCCTCCCGCC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCGGAGATGCCACCACTaGACTCCAGCCCGGGCAACA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLRRCHH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAGTGGTGGCATCTCCG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCACAAAGGCTCTGTGTaGCCTGGGCAGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLHKGSV*PGQWPR
Trigger: TCTGGGCCACTGCCCAGGCCACACAGAGCCTTTGTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGGCAGGAGAATCATGTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRGRRIM*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCACATGATTCTCCTGCC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGTGTGGCCTGGGCAGTaGCCCAGATACCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSVWPGQ*PRYPSG
Trigger: CCCTGATGGGTATCTGGGCCACTGCCCAGGCCACAC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGGCAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVGRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGCCACTCTGCAAACATaGCTGGGCCCTCCTTTGTTC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLATLQT*LGPPLF
Trigger: GAACAAAGGAGGGCCCAGGCATGTTTGCAGAGTGGC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTCCCTTGCCCCTCTTTaGCCCACCATAAGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLSLAPL*PTISKS
Trigger: GGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCATTTCCTTCCACCATaGGCAGTGAGCTTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRHFLPP*AVSFLN
Trigger: GTTCAGGAAGCTCACTGCTCATGGTGGAAGGAAATG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTACCTTTCTTCCTACTaGACCCGTCCCTATGCCGTG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLYLSSY*TRPYAV
Trigger: CACGGCATAGGGACGGGTGCAGTAGGAAGAAAGGTA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGACCATCAGCCCTTCCTaGAAGATGATGGAGTTGCTA +
Preference number: 2 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRTISPS*KMMELL
Trigger: TAGCAACTCCATCATCTTTCAGGAAGGGCTGATGGT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAACGGGCGGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVNGRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGTT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAACCCTGCCCCCATCCATaGCATCCCACAGGACTGGTA +
Preference number: 2 (lower is better)
Translates to: STTAQTAKATATQSFTAQPCPHP*HPTGLV
Trigger: TACCAGTCCTGTGGGATGTCATGGATGGGGGCAGGG...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTCCCTTGCCCCTCTTTaGCCCACCATAAGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSLAPL*PTISKS
Trigger: GGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGACAGAATACAGTGAGTaGATGAAGCACCCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRTEYSE*MKHPVG
Trigger: GCCTACAGGGTGCTTCATCCACTCACTGTATTCTGT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGATGAGGCCAGAAAAGTaGAAGCTACCTGCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLMRPEK*KLPAKG
Trigger: CCCTTTGGCAGGTAGCTTCCACTTTTCTGGCCTCAT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAGTTCGAGACCAGCCTaGGTAAAATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLSSRPA*VKWQNP
Trigger: GGGGTTTTGCCATTTTACCCAGGCTGGTCTCGAACT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAAATCCATACCCAGCTaGGCACAGTGGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLKSIPS*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCTGGGTATGGATTT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGCCTCCCTCAGACCTTaGGTATTCACTAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLASLRP*VFTKVQ
Trigger: TTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTTCCAGGGTATCACATaGTCCAGGTATCTCTCCCTA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLFQGIT*SRYLSL
Trigger: TAGGGAGAGATACCTGGATCATGTGATACCCTGGAA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGTTGCTACTTCCTGGTaGAATGTTGTCCCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSVATSW*NVVPCP
Trigger: GGGGCAAGGGACAACATTTCACCAGGAAGTAGCAAC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGCTACTTGGGAGGCTaGGGCATGAGAATTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSYLGG*GMRIAE
Trigger: CTCTGCAATTCTCATGCCTCAGCCTCCCAAGTAGCT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGACGAGAAAGTGTAAATaGGCTTTCCCTTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLTRKCK*AFPCPS
Trigger: AGAGGGGCAAGGGAAAGCGCATTTACACTTTCTCGT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCAAAGTCCTTACCTCTaGCTGCTTACATCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLQSPYL*LLTSLH
Trigger: GTGCAGAGATGTAAGCAGGCAGAGGTAAGGACTTTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTACCGAGAAAAAGCACTaGTCTGCGGGACGCATCAGA +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSTEKKH*SAGRIR
Trigger: TCTGATGCGTCCCGCAGAGCAGTGCTTTTTCTCGGT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAAGCTGCACTCCAGTTaGAGAACCACTGATGCAGAA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLKLHSS*RTTDAE
Trigger: TTCTGCATCAGTGGTTCTCCAACTGGAGTGCAGCTT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAGTTGCTCTAAGGTGGTaGGTAAAAAGACGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: SSPPQTDKYSTTAQTAKAVALRW*VKRRRG
Trigger: GCCTCTGCGTCTTTTTACTCACCACCTTAGAGCAAC...TGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACAGTTGGAGAACCACTaGTGCAGAAAACTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQQLENH*CRKLGG
Trigger: TCCCCCAAGTTTTCTGCATCAGTGGTTCTCCAACTG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTGGGAGGCTGAGGCATaGGAATTGCAGAGATTGCAG +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVWEAEA*ELQRLQ
Trigger: CTGCAATCTCTGCAATTCTCATGCCTCAGCCTCCCA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAACACTTCCTTTTGGGTTaGGTTTCCGGAGGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: STTAQTAKATATQSFTAQHFLLG*VSGGSR
Trigger: CCTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTG...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCTCTCTTGGGAGCAATaGAAAGTGGAAAGAGATGAC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLSWEQ*KVERDD
Trigger: GTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGAACTGTCCAAGTTGTaGACTGCACAAGGGTACCAC +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSELSKL*TAQGYH
Trigger: GTGGTACCCTTGTGCAGTGCACAACTTGGACAGTTC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGCTATATGCCATCTCTaGGCAATGGAATACGAGAAA +
Preference number: 2 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRAICHL*AMEYEK
Trigger: TTTCTCGTATTCCATTGCCCAGAGATGGCATATAGC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTACTTCAGAGATGCATaGTGGACCCAAAATCCATCG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLYFRDA*WTQNPS
Trigger: CGATGGATTTTGGGTCCACCATGCATCTCTGAAGTA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAAATCCATACCCAGCTaGGCACAGTGGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSKSIPS*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCTGGGTATGGATTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAATTCCCCACCCCAGACTaGCAAATACTCCACTACAGC +
Preference number: 2 (lower is better)
Translates to: STTAQTAKATATQSFTAQFPTPD*QILHYS
Trigger: GCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAA...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGTTTCAATCCTTCTTaGGCAGGGCCCTTGTTTTGC +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSFNPS*AGPLFC
Trigger: GCAAAACAAGGGCCCTGCTCAAGAAGGATTGAAACT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGGCAGGAGAATGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNGRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTATACCAAGCAATTATaGTGTCTCAGAGTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLYTKQL*CLRVLL
Trigger: GAGCAGGACTCTGAGACATCATAATTGCTTGGTATA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGTTAAAGCTTACATCTaGCTCTTCCTAACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLVKAYI*LFLTPS
Trigger: AGAAGGGGTTAGGAAGAGGCAGATGTAAGCTTTAAC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTTTCCAACTGACCACCTaGACCGCGGCACAGGCACAC +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFFQLTT*TAAQAH
Trigger: GTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAA...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTCTGCAAACATGCCTaGGCCCTCCTTTGTTCACAT +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLCKHA*ALLCSH
Trigger: ATGTGAACAAAGGAGGGCCCAGGCATGTTTGCAGAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp ACCAAATTGAGACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTaGCCTCCCAGCACTTCTTGCAAACCCTGTGTCACCCCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: TKLRPPLVRILSTGV*PPSTSCKPCVTPSD
Trigger: GTCAGAAGGGGTGACACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCTGATAGTAGTAGTTTaGGATAACCAACTAGGTGTG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLIVVV*DNQLGV
Trigger: CACACCTAGTTGGTTATCTCAAACTACTACTATCAG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAAGAGAACTATCAAAATaGGGCCACAGTGTACCAACC +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQRELSK*GHSVPT
Trigger: GGTTGGTACACTGTGGCCTCATTTTGATAGTTCTCT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAAATCATGCCAAACATaGCTCCATGCAGAGAACTAT +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLKSCQT*LHAENY
Trigger: ATAGTTCTCTGCATGGAGTCATGTTTGGCATGATTT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAACACGGATAATTCGTTaGCACAACTGTATGACCTGC +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQTRIIR*HNCMTC
Trigger: GCAGGTCATACAGTTGTGTCAACGAATTATCCGTGT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTCATCCTTGTTCTTCTaGTACACGGATAATTCGTTG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLSSLFF*YTDNSL
Trigger: CAACGAATTATCCGTGTATCAGAAGAACAAGGATGA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGATACAACATTGTGTATaGACTGTCCAAGTTGTGCAC +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLIQHCV*TVQVVH
Trigger: GTGCACAACTTGGACAGTTCATACACAATGTTGTAT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAATGCACAAATTACCTaGTGGCAGCAAAACAAGAAG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLNAQIT*WQQNKK
Trigger: CTTCTTGTTTTGCTGCCATCAGGTAATTTGTGCATT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCTCAGCCAGAAACTCCAACATGACAGTGTGACTCAGCATTGGTGGTACTTACTTGCTGGGCATCTTTaGGCACTGCTGATCACTGTT +
Preference number: 2 (lower is better)
Translates to: HLSQKLQHDSVTQHWWYLLAGHL*ALLITV
Trigger: AACAGTGATCAGCAGTGCTCAAAGATGCCCAGCAAG...TAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGGCTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCTGGGAGGTGGAGGTTaGAGTGAGCGGAGATGCCAC +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNLGGGG*SERRCH
Trigger: GTGGCATCTCCGCTCACTGCAACCTCCACCTCCCAG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAGGAGAGGCCAGGAATaGAGGTTTCACGCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFRRGQE*RFHAQL
Trigger: GAGCTGGGCGTGAAACCTGCATTCCTGGCCTCTCCT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGGGTATTCACTAAGGTaGAACTTTCTCACCAAACAA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLGYSLR*NFLTKQ
Trigger: TTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCACAAAGGCTCTGTGTaGCCTGGGCAGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNHKGSV*PGQWPR
Trigger: TCTGGGCCACTGCCCAGGCCACACAGAGCCTTTGTG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTTCAGAGATGCATGGTaGACCCAAAATCCATCGAGC +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVFRDAW*TQNPSS
Trigger: GCTCGATGGATTTTGGGTCCACCATGCATCTCTGAA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCCTGTGTCACCCCTTCTaGCTTTCCACTGATTTTTCA +
Preference number: 2 (lower is better)
Translates to: PPLVRILSTGVLPPSTSCLCHPF*LSTDFS
Trigger: TGAAAAATCAGTGGAAAGTCAGAAGGGGTGACACAG...GCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTCCCCATTTCTTTTATaGTTCTCAGCAGTTAGGGCA +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSPFLL*FSAVRA
Trigger: TGCCCTAACTGCTGAGAATCATAAAAGAAATGGGGA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACTGGGAGGTGGAGGTTaGAGTGAGCGGAGATGCCAC +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLGGGG*SERRCH
Trigger: GTGGCATCTCCGCTCACTGCAACCTCCACCTCCCAG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCAAGGCAGTACTATTTaGTCACAAAATAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLQGSTI*SQNRSV
Trigger: CACAGATCTATTTTGTGAGCAAATAGTACTGCCTTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGATTCTCAGGTCCCATTaGATACTTACAGATTCAGAA +
Preference number: 2 (lower is better)
Translates to: VSLTVCREDEGRAPVISLILRSH*ILTDSE
Trigger: TTCTGAATCTGTAAGTATGCAATGGGACCTGAGAAT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTATGCTGCTTTGCTTaGCCTGTGCACTATATGATG +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLCCFA*PVHYMM
Trigger: CATCATATAGTGCACAGGGCAAGCAAAGCAGCATAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAAATACACTCCCCTTGTaGCATAAAGTCCAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQNTLPL*HKVQLE
Trigger: TTCAAGCTGGACTTTATGCCACAAGGGGAGTGTATT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGACTAATTCCCTATCCTaGTTGAATTGCCCAAGAAAC +
Preference number: 2 (lower is better)
Translates to: PHPRLTNTPLQHRQPKQQTNSLS*LNCPRN
Trigger: GTTTCTTGGGCAATTCAACCAGGATAGGGAATTAGT...CTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CAA 90 bp TGTAGGGCATACTTCACCAAATTGAGACCACCACTCGTTAGAATCTaGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCAAACCCTGT +
Preference number: 2 (lower is better)
Translates to: CRAYFTKLRPPLVRI*STGVLPPSTSCKPC
Trigger: ACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGCCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR-3UTR TCA 90 bp ACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAACAAACCAAAAAGCTCTaGGCATCAGGCAACTCAAGC +
Preference number: 2 (lower is better)
Translates to: TAQTAKATATQSFTAQRKQTKKL*ASGNSS
Trigger: GCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTG...TTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAAGGTGGAGGCACTTTaGAAAAAGACTCATAGTAGT +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSKVEAL*KKTHSS
Trigger: ACTACTATGAGTCTTTTTTCAAAGTGCCTCCACCTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAGCAGTCCGGATTAAATaGGCTGAATTCACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: STTAQTAKATATQSFTAQAVRIK*AEFTEA
Trigger: TGCTTCTGTGAATTCAGCTCATTTAATCCGGACTGC...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCACTCAAGCAGCCACTaGTCTCTGGAACTAGGCTCC +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNHSSSH*SLELGS
Trigger: GGAGCCTAGTTCCAGAGAGCAGTGGCTGCTTGAGTG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCAGCCCGGGCAACAGTaGAAGACCCCGTCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNQPGQQ*KTPSEN
Trigger: ATTTTCAGACGGGGTCTTGCACTGTTGCCCGGGCTG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCCTTTCCTCACCATGTaGAAGATGCAGGGATTTAAA +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVPFLTM*KMQGFK
Trigger: TTTAAATCCCTGCATCTTGCACATGGTGAGGAAAGG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAGGTGATTCCCAAACTTaGCTACATTTTAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQGDSQT*LHFRNA
Trigger: GGCATTTCTAAAATGTAGCCAAGTTTGGGAATCACC...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTCATCCTTGTTCTTCTaGTACACGGATAATTCGTTG +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVSSLFF*YTDNSL
Trigger: CAACGAATTATCCGTGTATCAGAAGAACAAGGATGA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAGAGACAAGTTCAGCTaGCCCATGAATGAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVRDKFS*PMNEKN
Trigger: ATTTTTCTCATTCATGGGTCAGCTGAACTTGTCTCT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGCACACAGAATACAGTaGGTGGATGAAGCACCCTGT +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFAHRIQ*VDEAPC
Trigger: ACAGGGTGCTTCATCCACTCACTGTATTCTGTGTGC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCCAGCCCCTGAATAACTaGAGGACACAAATAGCAGAC +
Preference number: 2 (lower is better)
Translates to: KYSTTAQTAKATATQSFTQPLNN*RTQIAD
Trigger: GTCTGCTATTTGTGTCCTTCAGTTATTCAGGGGCTG...GGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCAGGTAGCAACCAAATaGCTTGCTTTGGAAAATAAA +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSQVATK*LALENK
Trigger: TTTATTTTCCAAAGCAAGGCATTTGGTTGCTACCTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ATATACAGCACTTCCTTTTGGGTTGAGTTTCCGGAGGCTCGAGGGCAGCTAGGACTATCCTGGTTGAATTaGCCAAGAAACAGTATAGTA +
Preference number: 2 (lower is better)
Translates to: IYSTSFWVEFPEARGQLGLSWLN*PRNSIV
Trigger: TACTATACTGTTTCTTGGGCAATTCAACCAGGATAG...TCCTAGCTGCCCTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTGCTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTAATAAGCTACCGTTaGCATGGTTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLISYR*HGSNAT
Trigger: TGTTGCATTTGAACCATGCCAACGGTAGCTTATTAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp GAAGACAGCTGCTATCTACCCCATTCACAGATGAGTACCTTCTACTaGCCAGGCACTATGCTAAGAACCTCACATATAGCAATTCATGTC +
Preference number: 2 (lower is better)
Translates to: EDSCYLPHSQMSTFY*PGTMLRTSHIAIHV
Trigger: GACATGAATTGCTATATGTGAGGTTCTTAGCATAGTGCCTGGCAAGTAGAAGGTACTCATCTGTGAATGGGGTAGATAGCAGCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTACCATCAGCCCTTCCTaGAAGATGATGGAGTTGCTA +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFTISPS*KMMELL
Trigger: TAGCAACTCCATCATCTTTCAGGAAGGGCTGATGGT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TATCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGATCTTTGAGCACTGCTaGTCACTGTTAGAAATAACT +
Preference number: 2 (lower is better)
Translates to: YLPHPRLTNTPLQHRQPKIFEHC*SLLEIT
Trigger: AGTTATTTCTAACAGTGATCAGCAGTGCTCAAAGAT...CTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR TCA 90 bp ACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAGTTTTAACACAACCCTaGCCACTACGAATCATTCAG +
Preference number: 2 (lower is better)
Translates to: TAQTAKATATQSFTAQRKVLTQP*PLRIIQ
Trigger: CTGAATGATTCGTAGTGGTCAGGGTTGTGTTAAAAC...TTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR TCA 90 bp CTTGCCCTATTAGGCATGTCTGCTCAGTGTTCAAACTTCAAAGCACCAGTACCAATTCCCTATCCTGGTTaGATTGCCCAAGAAACAGTA +
Preference number: 2 (lower is better)
Translates to: LALLGMSAQCSNFKAPVPIPYPG*IAQETV
Trigger: TACTGTTTCTTGGGCAATTCAACCAGGATAGGGAAT...TGGTACTGGTGCTTTGAAGTTTGAACACTGAGCAGACATGCCTAATAGGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAGAGCTTCCTGAACACTaGTTCACTAAGAATTATTAT +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQELPEH*FTKNYY
Trigger: ATAATAATTCTTAGTGAAGCAGTGTTCAGGAAGCTC...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCACAACTGTATGACCTaGTTTATTTCACTTACTCAT +
Preference number: 2 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSHNCMT*FISLTH
Trigger: ATGAGTAAGTGAAATAAAGCAGGTCATACAGTTGTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACACAACTGTATGACCTaGTTTATTTCACTTACTCAT +
Preference number: 2 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQHNCMT*FISLTH
Trigger: ATGAGTAAGTGAAATAAAGCAGGTCATACAGTTGTG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTACGAGAAAGTGTAAATaGGCTTTCCCTTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFTRKCK*AFPCPS
Trigger: AGAGGGGCAAGGGAAAGCGCATTTACACTTTCTCGT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCAAGGCAGTACTATTTaGTCACAAAATAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVQGSTI*SQNRSV
Trigger: CACAGATCTATTTTGTGAGCAAATAGTACTGCCTTG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAAGCTACCGTTGGCATaGTTCAAATGCAACATTATT +
Preference number: 2 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVKLPLA*FKCNII
Trigger: AATAATGTTGCATTTGAACCATGCCAACGGTAGCTT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp ACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAATGTTCATATTCTTGCTaGGCATCTTTGAGCACTGCT +
Preference number: 2 (lower is better)
Translates to: TAQTAKATATQSFTAQRKCSYSC*ASLSTA
Trigger: AGCAGTGCTCAAAGATGCCCAGCAAGAATATGAACA...TTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTACACGGATAATTCGTTaGCACAACTGTATGACCTGC +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFTRIIR*HNCMTC
Trigger: GCAGGTCATACAGTTGTGTCAACGAATTATCCGTGT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGGCAGGAGAATCATGTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIGRRIM*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCACATGATTCTCCTGCC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp AAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGATTTCAGAGTAAACTaGTTTCCCAGAACGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KYSTTAQTAKATATQSFTDFRVN*FPRTER
Trigger: CCTTTCCGTTCTGGGAAACCAGTTTACTCTGAAATC...GGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CAA 90 bp GTTGTCAAAAACCTCATTCCAAGATGTAGGGCATACTTCACCAAATaGAGACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: VVKNLIPRCRAYFTK*RPPLVRILSTGVLP
Trigger: AGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGCCCTACATCTTGGAATGAGGTTTTTGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR CAA 90 bp CCAACAAACCTACCCTTACAGATGAAGCCTTTTATGCTGCTTTGCTaGCCCTGTGCACTATATGATGCTTCAACTACGATTTTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: PTNLPLQMKPFMLLC*PCALYDASTTIFSF
Trigger: AAAGCTGAAAATCGTAGTTGAAGCATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAGGTTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp GCACAACACCAACAATGCCAAGTTGTTTCGCCTCAGTTTTACCATTaGACAAATGACATCATCCATCCCTGCCTCTTTTACAGAGTTGTA +
Preference number: 2 (lower is better)
Translates to: AQHQQCQVVSPQFYH*TNDIIHPCLFYRVV
Trigger: TACAACTCTGTAAAAGAGGCAGGGATGGATGATGTCATTTGTCAAATGGTAAAACTGAGGCGAAACAACTTGGCATTGTTGGTGTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCATTTCCTTCCACCATaGGCAGTGAGCTTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRHFLPP*AVSFLN
Trigger: GTTCAGGAAGCTCACTGCTCATGGTGGAAGGAAATG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCAGTTGGAGAACCACTaGTGCAGAAAACTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRQLENH*CRKLGG
Trigger: TCCCCCAAGTTTTCTGCATCAGTGGTTCTCCAACTG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGTTGCTACTTCCTGGTaGAATGTTGTCCCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIVATSW*NVVPCP
Trigger: GGGGCAAGGGACAACATTTCACCAGGAAGTAGCAAC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCAGCTGTTCATATTCTTaGTGGGCATCTTTGAGCACT +
Preference number: 2 (lower is better)
Translates to: SNSNTKFHRTKENQKRILSCSYS*WASLST
Trigger: AGTGCTCAAAGATGCCCAGCAAGAATATGAACAGCT...GAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CAA 90 bp GAAATGTTGTCCCTTGCCCCACAGTTATATAACAAATTTCTAAATTaGTACCCAGCAAGGACTAAGTTTCAATCCTTCTTGAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: EMLSLAPQLYNKFLN*YPARTKFQSFLSRA
Trigger: GGCCCTGCTCAAGAAGGATTGAAACTTAGTCCTTGCTGGGTACAAATTTAGAAATTTGTTATATAACTGTGGGGCAAGGGACAACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTCCACTCCTCAATATCTaGAAAGTAAGAGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSPLLNI*KVRDGG
Trigger: CCCTCCGTCTCTTACTTTTCAGATATTGAGGAGTGG...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTGATAGTAGTAGTTTaGGATAACCAACTAGGTGTG +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLIVVV*DNQLGV
Trigger: CACACCTAGTTGGTTATCTCAAACTACTACTATCAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTCCTGGCTAACATGGTaGAACCCTATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNSWLTW*NPISTK
Trigger: TTTAGTAGAGATAGGGTTTCACCATGTTAGCCAGGA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACACCTGAGCCCAATCTaGAGGCTAGAGACAAGTTCA +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIHLSPI*RLETSS
Trigger: TGAACTTGTCTCTAGCCTTCAGATTGGGCTCAGGTG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTATACAACATTGTGTATaGACTGTCCAAGTTGTGCAC +
Preference number: 2 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFIQHCV*TVQVVH
Trigger: GTGCACAACTTGGACAGTTCATACACAATGTTGTAT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCCTTTCCTCACCATGTaGAAGATGCAGGGATTTAAA +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNPFLTM*KMQGFK
Trigger: TTTAAATCCCTGCATCTTGCACATGGTGAGGAAAGG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp GCAATGTGCCTTAAGAAAAACGCTAGAATGCTAGATCTTAAGCCCATTATAACCCAAAAACGGCCGGAATaGATGAGGAAGGAATACTTC +
Preference number: 2 (lower is better)
Translates to: AMCLKKNARMLDLKPIITQKRPE*MRKEYF
Trigger: GAAGTATTCCTTCCTCATGCATTCCGGCCGTTTTTG...GGTTATAATGGGCTTAAGATCTAGCATTCTAGCGTTTTTCTTAAGGCACATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp GTACAACAGCAGTCCGGATTAAATGAGCTGAATTCACAGAAGCAATGTGCCTTACCTATTAGGCATGTCTaGTCAGTGTTCAAACTTCAA +
Preference number: 2 (lower is better)
Translates to: VQQQSGLNELNSQKQCALPIRHV*SVFKLQ
Trigger: TTGAAGTTTGAACACTGAGCAGACATGCCTAATAGG...TAAGGCACATTGCTTCTGTGAATTCAGCTCATTTAATCCGGACTGCTGTTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAAGCTGCACTCCAGTTaGAGAACCACTGATGCAGAA +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRKLHSS*RTTDAE
Trigger: TTCTGCATCAGTGGTTCTCCAACTGGAGTGCAGCTT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp ATTTCCACTTCACAGAGAATGCAACACTCAGAGCATTTAAGTTACTaGCCTGAAGACATAGATCAAGTTAGTGGCAGAGCCAAACTCAAA +
Preference number: 2 (lower is better)
Translates to: ISTSQRMQHSEHLSY*PEDIDQVSGRAKLK
Trigger: TTTGAGTTTGGCTCTGCCACTAACTTGATCTATGTCTTCAGGCAAGTAACTTAAATGCTCTGAGTGTTGCATTCTCTGTGAAGTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp GTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTTTGATCAGTTaGATCCCAAGTAAATATGTCCTAAAAGTCCCAGAACACAGCTCC +
Preference number: 2 (lower is better)
Translates to: VYHPRLFHMFFSLIS*IPSKYVLKVPEHSS
Trigger: GGAGCTGTGTTCTGGGACTTTTAGGACATATTTACTTGGGATCAAACTGATCAAACTAAAGAACATGTGAAACAACCTTGGGTGGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR TCA 90 bp CTAGGTCACCCCTTTTCCATAAGGTTTGTCATGCAATTACAATTAACAATTGATCAAACCAAAAAGCTCTaGGCATCAGGCAACTCAAGC +
Preference number: 2 (lower is better)
Translates to: LGHPFSIRFVMQLQLTIDQTKKL*ASGNSS
Trigger: GCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTG...ATCAATTGTTAATTGTAATTGCATGACAAACCTTATGGAAAAGGGGTGACCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACCACTCCTCAATATCTaGAAAGTAAGAGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIPLLNI*KVRDGG
Trigger: CCCTCCGTCTCTTACTTTTCAGATATTGAGGAGTGG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAGAGAACTATCAAAATaGGGCCACAGTGTACCAACC +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRRELSK*GHSVPT
Trigger: GGTTGGTACACTGTGGCCTCATTTTGATAGTTCTCT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATTCCAGGGTATCACATaGTCCAGGTATCTCTCCCTA +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIFQGIT*SRYLSL
Trigger: TAGGGAGAGATACCTGGATCATGTGATACCCTGGAA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACTACCCAAGTTCTTCTaGCATGCAGAAATCAATCTG +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLPKFF*HAEINL
Trigger: CAGATTGATTTCTGCATGTCAGAAGAACTTGGGTAG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTGCAGTACTCAACTTTaGAAGGCGGACTTAAGAATA +
Preference number: 2 (lower is better)
Translates to: LALKICHFYFRDAWWTQNCSTQL*KADLRI
Trigger: TATTCTTAAGTCCGCCTTTCAAAGTTGAGTACTGCA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GTACAACAGCAGTCCGGATTAAATGAGCTGAATTCACAGAAGCAATGTGCCTTACCTATCTTCAAAATCTaGGTTTCCCATCAAACTACA +
Preference number: 2 (lower is better)
Translates to: VQQQSGLNELNSQKQCALPIFKI*VSHQTT
Trigger: TGTAGTTTGATGGGAAACTCAGATTTTGAAGATAGG...TAAGGCACATTGCTTCTGTGAATTCAGCTCATTTAATCCGGACTGCTGTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp ACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGACCAAGTTCCCTTTTaGAATAGTAATCCAAACCAA +
Preference number: 2 (lower is better)
Translates to: TAKATATQSFTAQRKTRKDQVPF*NSNPNQ
Trigger: TTGGTTTGGATTACTATTGCAAAAGGGAACTTGGTC...TTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAATAATCATTCAGAGATaGCCTAACCATCAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKIIIQR*PNHQPF
Trigger: GAAGGGCTGATGGTTAGGGCATCTCTGAATGATTAT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATTGGGATCGGCTATATaGCATCTCTGGGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQILGSAI*HLWAME
Trigger: TTCCATTGCCCAGAGATGGCATATAGCCGATCCCAA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAAATACACTCCCCTTGTaGCATAAAGTCCAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKNTLPL*HKVQLE
Trigger: TTCAAGCTGGACTTTATGCCACAAGGGGAGTGTATT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATTCAGAGATGCATGGTaGACCCAAAATCCATCGAGC +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIFRDAW*TQNPSS
Trigger: GCTCGATGGATTTTGGGTCCACCATGCATCTCTGAA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp AATACTTCCAAAAATATAGGAATAGGGACACTATATAAAGCACGCTaGAGAACTGTGGCAGAAATAGCCATGGCTGCCTTCTTTGACATT +
Preference number: 2 (lower is better)
Translates to: NTSKNIGIGTLYKAR*RTVAEIAMAAFFDI
Trigger: AATGTCAAAGAAGGCAGCCATGGCTATTTCTGCCACAGTTCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATTTTTGGAAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAAGAGACAAGTTCAGCTaGCCCATGAATGAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKRDKFS*PMNEKN
Trigger: ATTTTTCTCATTCATGGGTCAGCTGAACTTGTCTCT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp GCAATGTGCCTTAAGAAAAACGCTAGAATGCTAGATCTTAAGCCCATTATAACCAGGAGAGTAGATAACTaGCCAAAAACTTCACCTCAA +
Preference number: 2 (lower is better)
Translates to: AMCLKKNARMLDLKPIITRRVDN*PKTSPQ
Trigger: TTGAGGTGAAGTTTTTGGTCAGTTATCTACTCTCCT...GGTTATAATGGGCTTAAGATCTAGCATTCTAGCGTTTTTCTTAAGGCACATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGTTAAAGCTTACATCTaGCTCTTCCTAACCCCTTCT +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRVKAYI*LFLTPS
Trigger: AGAAGGGGTTAGGAAGAGGCAGATGTAAGCTTTAAC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATACTTCAGAGATGCATaGTGGACCCAAAATCCATCG +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIYFRDA*WTQNPS
Trigger: CGATGGATTTTGGGTCCACCATGCATCTCTGAAGTA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGAGAAAGCACAAACCTaGACATATAGAGGGCTAAAT +
Preference number: 2 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSEKAQT*TYRGLN
Trigger: ATTTAGCCCTCTATATGTTCAGGTTTGTGCTTTCTC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAAATCATGCCAAACATaGCTCCATGCAGAGAACTAT +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRKSCQT*LHAENY
Trigger: ATAGTTCTCTGCATGGAGTCATGTTTGGCATGATTT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACTACCCAAGTTCTTCTaGCATGCAGAAATCAATCTG +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQILPKFF*HAEINL
Trigger: CAGATTGATTTCTGCATGTCAGAAGAACTTGGGTAG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACCTGGAAAGAAAACATaGTTGGGCCATGTAATTAAA +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKPGKKT*LGHVIK
Trigger: TTTAATTACATGGCCCAATCATGTTTTCTTTCCAGG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACACTTAAGAAGAGTCTaGATTAAGAGTCTTTCCATG +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKHLRRV*IKSLSM
Trigger: CATGGAAAGACTCTTAATGCAGACTCTTCTTAAGTG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATATTATGGACCTACTTaGTATTTAAGGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKYYGPT*YLREGS
Trigger: TGACCCTTCCCTTAAATACCAAGTAGGTCCATAATA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCTAAATCATACTCCCTaGAGAATATCACTCACCTTC +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRLNHTP*RISLTF
Trigger: GAAGGTGAGTGATATTCTCCAGGGAGTATGATTTAG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATTAATAAGCTACCGTTaGCATGGTTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLISYR*HGSNAT
Trigger: TGTTGCATTTGAACCATGCCAACGGTAGCTTATTAA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGCCATCTCTGGGCAATaGAATACGAGAAAGTGTAAA +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIAISGQ*NTRKCK
Trigger: TTTACACTTTCTCGTATTCCATTGCCCAGAGATGGC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp AGAGCAAACAGAACAGTTATGATCCTGTGCTCTATTGTAATAGGGTaGAGAAAATGCTATACTTACCTTAGCCTTGAAAATCTGTCACTT +
Preference number: 2 (lower is better)
Translates to: RANRTVMILCSIVIG*RKCYTYLSLENLSL
Trigger: AAGTGACAGATTTTCAAGGCTAAGGTAAGTATAGCATTTTCTCAACCCTATTACAATAGAGCACAGGATCATAACTGTTCTGTTTGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGAGAAAGCACAAACCTaGACATATAGAGGGCTAAAT +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIEKAQT*TYRGLN
Trigger: ATTTAGCCCTCTATATGTTCAGGTTTGTGCTTTCTC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAAAGGTGGAGGCACTTTaGAAAAAGACTCATAGTAGT +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIKVEAL*KKTHSS
Trigger: ACTACTATGAGTCTTTTTTCAAAGTGCCTCCACCTT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp AATATAGGAATAGGGACACTATATAAAGCACGCTTGAGAACTGTGGCAGAAATAGACCAAGTTCCCTTTTaGAATAGTAATCCAAACCAA +
Preference number: 2 (lower is better)
Translates to: NIGIGTLYKARLRTVAEIDQVPF*NSNPNQ
Trigger: TTGGTTTGGATTACTATTGCAAAAGGGAACTTGGTC...TATTTCTGCCACAGTTCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGTATTATGGACCTACTTaGTATTTAAGGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: IKSSLKNIALTIKSISGRYYGPT*YLREGS
Trigger: TGACCCTTCCCTTAAATACCAAGTAGGTCCATAATA...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 90 bp TCTCATGCAGATCAGTATAATGTCCTAAAGGTAAATAAACCTTTCTaGCTACCTAAAGAAAATGTATCCCATATTCAGATTCGCAGCACA +
Preference number: 2 (lower is better)
Translates to: SHADQYNVLKVNKPF*LPKENVSHIQIRST
Trigger: TGTGCTGCGAATCTGAATATGGGATACATTTTCTTTAGGTAGCAAGAAAGGTTTATTTACCTTTAGGACATTATACTGATCTGCATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACCTGGAAAGAAAACATaGTTGGGCCATGTAATTAAA +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIPGKKT*LGHVIK
Trigger: TTTAATTACATGGCCCAATCATGTTTTCTTTCCAGG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACACTTAAGAAGAGTCTaGATTAAGAGTCTTTCCATG +
Preference number: 2 (lower is better)
Translates to: TRTAFETSMITKYAILQIHLRRV*IKSLSM
Trigger: CATGGAAAGACTCTTAATGCAGACTCTTCTTAAGTG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp TGGGCAGTGGCCCAGATACCCATCAGGGGTTCCAACTaGCCACCTGCACCGCGGCACAGGCACACAGAATAC +
Preference number: 3 (lower is better)
Translates to: WAVAQIPIRGSN*PPAPRHRHTEY
Trigger: GTATTCTGTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAACCCCTGATGGGTATCTGGGCCACTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp GTGAAGCAGGGCCCCCAGCCACTCTGCAAACATGCCTaGGCCCTCCTTTGTTCACATTCCCTCCACTCAGAA +
Preference number: 3 (lower is better)
Translates to: VKQGPQPLCKHA*ALLCSHSLHSE
Trigger: TTCTGAGTGGAGGGAATGTGAACAAAGGAGGGCCCAGGCATGTTTGCAGAGTGGCTGGGGGCCCTGCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCAGGAGGTCAGGAGTTaGAGATCTGTCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRQEVRS*RSVWPT
Trigger: TGTTGGCCAGACAGATCTCAAACTCCTGACCTCCTG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAGGCGGGAGGATCGCTaGAGCTGGGGAGGTCAAGGA +
Preference number: 3 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVRREDR*SWGGQG
Trigger: TCCTTGACCTCCCCAGCTCAAGCGATCCTCCCGCCT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp CAGCACTGTAAGCACCACAAAAGGAGAGGCCAGGAATaGAGGTTTCACGCCCAGCTCTGCTACCATACAGCT +
Preference number: 3 (lower is better)
Translates to: QHCKHHKRRGQE*RFHAQLCYHTA
Trigger: AGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGCATTCCTGGCCTCTCCTTTTGTGGTGCTTACAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCTTCCTGGTGAAATGTaGTCCCTTGCCCCACAGTTA +
Preference number: 3 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLPGEM*SLAPQL
Trigger: TAACTGTGGGGCAAGGGACAACATTTCACCAGGAAG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCAGGAGGTCAGGAGTTaGAGATCTGTCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVQEVRS*RSVWPT
Trigger: TGTTGGCCAGACAGATCTCAAACTCCTGACCTCCTG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAAAAAGGATTACAAATaGTTCCCCACCCAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRKKDYK*FPTQFS
Trigger: GGAGAACTGGGTGGGGAACAATTTGTAATCCTTTTT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCTGCCAAAGGGCACGTaGTTAGGAGTAATAATGCAA +
Preference number: 3 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLPKGT*LGVIMQ
Trigger: TTGCATTATTACTCCTAACAACGTGCCCTTTGGCAG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp GACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTaGCTCCCAGCACTTCTTGCAAACCCTGTGTCACCC +
Preference number: 3 (lower is better)
Translates to: DHHSLESCLLEF*LPALLANPVSP
Trigger: GGGTGACACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR CCA 72 bp AGGTTGCAGAGCTGGCTCCAAGCCTCCCTCAGACCTTaGGTATTCACTAAGGTGCAACTTTCTCACCAAACA +
Preference number: 3 (lower is better)
Translates to: RLQSWLQASLRP*VFTKVQLSHQT
Trigger: TGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCTCTGCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTTATTATGGACCTACTaGGTATTTAAGGGAAGGGTC +
Preference number: 3 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRLLWTY*VFKGRV
Trigger: GACCCTTCCCTTAAATACCAAGTAGGTCCATAATAA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGTGAAATGTTGTCCCTaGCCCCACAGTTATATAACA +
Preference number: 3 (lower is better)
Translates to: VSLTVCREDEGRAPVISLVKCCP*PHSYIT
Trigger: TGTTATATAACTGTGGGGCAAGGGACAACATTTCAC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTATGAACTGTCCAAGTaGTGCACTGCACAAGGGTAC +
Preference number: 3 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSYELSK*CTAQGY
Trigger: GTACCCTTGTGCAGTGCACAACTTGGACAGTTCATA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp ACTCCTGGCAATGAGTATGAGGAGGAAGCCCCTCACTaGTACAGCAGTTTAAGACCCAGAAGTCAACAGGGT +
Preference number: 3 (lower is better)
Translates to: TPGNEYEEEAPH*YSSLRPRSQQG
Trigger: ACCCTGTTGACTTCTGGGTCTTAAACTGCTGTATCAGTGAGGGGCTTCCTCCTCATACTCATTGCCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp TCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTaGAACTTTCTCACCAAACAAACCCTGCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SKPPSDLGYSLR*NFLTKQTLLFP
Trigger: TGGGAAGAGCAGGGTTTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp TTCTTACAAGAAGCCAGTGAAGAATTCACAGGTGCCTaGCCACCCTTCACAAGCTGCCAAGAGATGGACCTA +
Preference number: 3 (lower is better)
Translates to: FLQEASEEFTGA*PPFTSCQEMDL
Trigger: TAGGTCCATCTCTTGGCAGCTTGTGAAGGGTGGGCAGGCACCTGTGAATTCTTCACTGGCTTCTTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp AGCCAGAAACTCCAACATGACAGTGTGACTCAGCATTaGTGGTACTTAGGACCCAGGTCTACAGACTCACCT +
Preference number: 3 (lower is better)
Translates to: SQKLQHDSVTQH*WYLGPRSTDSP
Trigger: AGGTGAGTCTGTAGACCTGGGTCCTAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTTATTATGGACCTACTaGGTATTTAAGGGAAGGGTC +
Preference number: 3 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLLWTY*VFKGRV
Trigger: GACCCTTCCCTTAAATACCAAGTAGGTCCATAATAA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGTTTAATAAGCTACCGTaGGCATGGTTCAAATGCAAC +
Preference number: 3 (lower is better)
Translates to: VSLTVCREDEGRAPVISLFNKLP*AWFKCN
Trigger: GTTGCATTTGAACCATGCCAACGGTAGCTTATTAAA...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp GTTCATAAAGTATCTTTGGAAGGGCCTTTTCTAATTTaGACAAAGGCTCTGTGTGGCCTGGGCAGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: VHKVSLEGPFLI*TKALCGLGSGP
Trigger: TGGGCCACTGCCCAGGCCACACAGAGCCTTTGTGCAAATTAGAAAAGGCCCTTCCAAAGATACTTTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp GTGATCCACAGTTCACACCGAGAAAAAGCACTGCTCTaGGGGACGCATCAGAGCAAACAGAACAGTTATGAT +
Preference number: 3 (lower is better)
Translates to: VIHSSHREKALL*GTHQSKQNSYD
Trigger: ATCATAACTGTTCTGTTTGCTCTGATGCGTCCCGCAGAGCAGTGCTTTTTCTCGGTGTGAACTGTGGATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp CTTGCCCAAGGAAACTCTGGTGCCTCAACTAGAACCTaGATCTTCAACTTCCAACTGAGAGCTCTTTCCAAC +
Preference number: 3 (lower is better)
Translates to: LAQGNSGASTRT*IFNFQLRALSN
Trigger: GTTGGAAAGAGCTCTCAGTTGGAAGTTGAAGATCCAGGTTCTAGTTGAGGCACCAGAGTTTCCTTGGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAACTTAAAAATCACATaGTTCAAGCTGCACTCCAGT +
Preference number: 3 (lower is better)
Translates to: VSLTVCREDEGRAPVISLNLKIT*FKLHSS
Trigger: ACTGGAGTGCAGCTTGAACAATGTGATTTTTAAGTT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATACACGGATAATTCGTaGACACAACTGTATGACCTG +
Preference number: 3 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQYTDNS*TQLYDL
Trigger: CAGGTCATACAGTTGTGTCAACGAATTATCCGTGTA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTTATGCTGCTTTGCTaGCCCTGTGCACTATATGAT +
Preference number: 3 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSFMLLC*PCALYD
Trigger: ATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTCCCTTGCCCCTCTTaGGCCCACCATAAGCAAGTC +
Preference number: 3 (lower is better)
Translates to: LALKICHFYFRDAWWTQNFPCPS*AHHKQV
Trigger: GACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp AGTAGCAGATACATCAATATCTTCCCCACCCCAGACTaGCAAATACTCCACTACAGCACAGACAGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: SSRYINIFPTPD*QILHYSTDSQS
Trigger: GCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGATATTGATGTATCTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
3UTR TCA 72 bp GAATACAGTGAGTGGATGAAGCACCCTGTAGGCTATTaGGACCAAAGTCCTTACCTCTGCCTGCTTACATCT +
Preference number: 3 (lower is better)
Translates to: EYSEWMKHPVGY*DQSPYLCLLTS
Trigger: AGATGTAAGCAGGCAGAGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTGCTTCATCCACTCACTGTATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp CAAAAAGCTCCTACCCAACAAACCTACCCTTACAGATaGAGCCTTTTATGCTGCTTTGCTTGCCCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: QKAPTQQTYPYR*SLLCCFACPVH
Trigger: GTGCACAGGGCAAGCAAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAGGTTTGTTGGGTAGGAGCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp ACCTCCACCCTTCAATCTTGCCCTATTAGGCATGTCTaGTCAGTGTTCAAACTTCAAAGCACCAGTACCAGT +
Preference number: 3 (lower is better)
Translates to: TSTLQSCPIRHV*SVFKLQSTSTS
Trigger: ACTGGTACTGGTGCTTTGAAGTTTGAACACTGAGCAGACATGCCTAATAGGGCAAGATTGAAGGGTGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CCA 72 bp CAGAAACTCCAACATGACAGTGTGACTCAGCATTGGTaGTACTTAGGACCCAGGTCTACAGACTCACCTAAA +
Preference number: 3 (lower is better)
Translates to: QKLQHDSVTQHW*YLGPRSTDSPK
Trigger: TTTAGGTGAGTCTGTAGACCTGGGTCCTAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAACTTAAAAATCACATaGTTCAAGCTGCACTCCAGT +
Preference number: 3 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSNLKIT*FKLHSS
Trigger: ACTGGAGTGCAGCTTGAACAATGTGATTTTTAAGTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp ATTTGTACCCAGCAAGGACTAAGTTTCAATCCTTCTTaGGCAGGGCCCTTGTTTTGCGAGTTTCTTAGCACC +
Preference number: 3 (lower is better)
Translates to: ICTQQGLSFNPS*AGPLFCEFLST
Trigger: GGTGCTAAGAAACTCGCAAAACAAGGGCCCTGCTCAAGAAGGATTGAAACTTAGTCCTTGCTGGGTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp AGAAATACACTTACACCTCAGCCAGAAACTCCAACATaGCAGTGTGACTCAGCATTGGTGGTACTTAGGACC +
Preference number: 3 (lower is better)
Translates to: RNTLTPQPETPT*QCDSALVVLRT
Trigger: GGTCCTAAGTACCACCAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGGCTGAGGTGTAAGTGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCTTCCTGGTGAAATGTaGTCCCTTGCCCCACAGTTA +
Preference number: 3 (lower is better)
Translates to: LALKICHFYFRDAWWTQNLPGEM*SLAPQL
Trigger: TAACTGTGGGGCAAGGGACAACATTTCACCAGGAAG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGCACCCTGTAGGCTATaGAGACCAAAGTCCTTACCT +
Preference number: 3 (lower is better)
Translates to: LALKICHFYFRDAWWTQNAPCRL*RPKSLP
Trigger: AGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTGC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp TCCAAGAGGACATTCTTAAAGCCAGACCAAGTTCCCTTTTGCAATAGTAATCCATCTTGCTGGGCATCTTaGAGCACTGCTGATCACTGT +
Preference number: 3 (lower is better)
Translates to: SKRTFLKPDQVPFCNSNPSCWAS*STADHC
Trigger: ACAGTGATCAGCAGTGCTCAAAGATGCCCAGCAAGA...TGGATTACTATTGCAAAAGGGAACTTGGTCTGGCTTTAAGAATGTCCTCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 72 bp ACCTCATTCCAAGATGTAGGGCATACTTCACCAAATTaGGACCACCACTCGTTAGAATCTTGTCTACTGGAG +
Preference number: 3 (lower is better)
Translates to: TSFQDVGHTSPN*DHHSLESCLLE
Trigger: CTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGCCCTACATCTTGGAATGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR TCA 72 bp GTGCCTCAACTAGAACCTGGATCTTCAACTTCCAACTaGGAGCTCTTTCCAACAGTGTTATTACTACCATGG +
Preference number: 3 (lower is better)
Translates to: VPQLEPGSSTSN*ELFPTVLLLPW
Trigger: CCATGGTAGTAATAACACTGTTGGAAAGAGCTCTCAGTTGGAAGTTGAAGATCCAGGTTCTAGTTGAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp TCTCAATACAACATTGTGTATGAACTGTCCAAGTTGTaGACTGCACAAGGGTACCACATCCAAGGCAGTACT +
Preference number: 3 (lower is better)
Translates to: SQYNIVYELSKL*TAQGYHIQGST
Trigger: AGTACTGCCTTGGATGTGGTACCCTTGTGCAGTGCACAACTTGGACAGTTCATACACAATGTTGTATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGTGAAATGTTGTCCCTaGCCCCACAGTTATATAACA +
Preference number: 3 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFVKCCP*PHSYIT
Trigger: TGTTATATAACTGTGGGGCAAGGGACAACATTTCAC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCCTCCTATCCTGGTTGAATaGCCCAAGAAACAGTATAGT +
Preference number: 3 (lower is better)
Translates to: NSNTKFHRTKENQKRILPPILVE*PKKQYS
Trigger: ACTATACTGTTTCTTGGGCAATTCAACCAGGATAGG...AGGGAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 72 bp TCGCAGCACAGAACCTGTATTCTGATAGTAGTAGTTTaGGATAACCAACTAGGTGTGGTGATTCCCAAACTT +
Preference number: 3 (lower is better)
Translates to: SQHRTCILIVVV*DNQLGVVIPKL
Trigger: AAGTTTGGGAATCACCACACCTAGTTGGTTATCTCAAACTACTACTATCAGAATACAGGTTCTGTGCTGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp AACACCATAATGCAAGTTAGGAGCAAAAACAGGACTTaGTTTATCACGCTATATGTACCAGGGTTCACGGAG +
Preference number: 3 (lower is better)
Translates to: NTIMQVRSKNRT*FITLYVPGFTE
Trigger: CTCCGTGAACCCTGGTACATATAGCGTGATAAATCAAGTCCTGTTTTTGCTCCTAACTTGCATTATGGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp GCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATaGTGGACCCAAAATCCATCGAGCATTTATTTGCTT +
Preference number: 3 (lower is better)
Translates to: ALKICHFYFRDA*WTQNPSSIYLL
Trigger: AAGCAAATAAATGCTCGATGGATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp ACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCCTTCATTCACATCGTCTCTaGCAAGTTTATGCTTATCTG +
Preference number: 3 (lower is better)
Translates to: TATQSFTAQRKTRKESSLHSHRL*QVYAYL
Trigger: CAGATAAGCATAAACTTGCAAGAGACGATGTGAATG...AAGGGAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTTAATAAGCTACCGTaGGCATGGTTCAAATGCAAC +
Preference number: 3 (lower is better)
Translates to: LALKICHFYFRDAWWTQNFNKLP*AWFKCN
Trigger: GTTGCATTTGAACCATGCCAACGGTAGCTTATTAAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR-3UTR CAA 90 bp AAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCATGGCTGCCTTCTTaGACATTAAAGTCTCAATTA +
Preference number: 3 (lower is better)
Translates to: KQQQHKVSPHKGKPEKNPPWLPS*TLKSQL
Trigger: TAATTGAGACTTTAATGTCAAAGAAGGCAGCCATGG...AGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 72 bp ATGCCAAACATGACTCCATGCAGAGAACTATCAAAATaGGGCCACAGTGTACCAACCTTAACTGATTTTAAG +
Preference number: 3 (lower is better)
Translates to: MPNMTPCRELSK*GHSVPTLTDFK
Trigger: CTTAAAATCAGTTAAGGTTGGTACACTGTGGCCTCATTTTGATAGTTCTCTGCATGGAGTCATGTTTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp ATTCTGTTCCAAGCTAGTTCTAATGCACAAATTACCTaGTGGCAGCAAAACAAGAAGTGCAGGGAGATTCTA +
Preference number: 3 (lower is better)
Translates to: ILFQASSNAQIT*WQQNKKCREIL
Trigger: TAGAATCTCCCTGCACTTCTTGTTTTGCTGCCATCAGGTAATTTGTGCATTAGAACTAGCTTGGAACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp GGATTTCCAACTCTGGCTGCATATACCAAGCAATTATaGTGTCTCAGAGTCCTGCTCCATAAAAAGAAGATA +
Preference number: 3 (lower is better)
Translates to: GFPTLAAYTKQL*CLRVLLHKKKI
Trigger: TATCTTCTTTTTATGGAGCAGGACTCTGAGACATCATAATTGCTTGGTATATGCAGCCAGAGTTGGAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp CTTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATaGATGGTGGACCCAAAATCCATCGAGCATTTATTT +
Preference number: 3 (lower is better)
Translates to: LSLENLSLLLQR*MVDPKSIEHLF
Trigger: AAATAAATGCTCGATGGATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp GGACGCATCAGAGCAAACAGAACAGTTATGATCCTGTaGTCTATTGTAATAGGGTTGAGAAAATGCTATACT +
Preference number: 3 (lower is better)
Translates to: GRIRANRTVMIL*SIVIGLRKCYT
Trigger: AGTATAGCATTTTCTCAACCCTATTACAATAGAGCACAGGATCATAACTGTTCTGTTTGCTCTGATGCGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp TTCCAAAATCAGACAGATAGGATTTCCAACTCTGGCTaGATATACCAAGCAATTATGATGTCTCAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: FQNQTDRISNSG*IYQAIMMSQSP
Trigger: AGGACTCTGAGACATCATAATTGCTTGGTATATGCAGCCAGAGTTGGAAATCCTATCTGTCTGATTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR GCA 72 bp CAGTTTTACCATTTGACAAATGACATCATCCATCCCTaGCTCTTTTACAGAGTTGTACTGAGGTCAAGTGAA +
Preference number: 3 (lower is better)
Translates to: QFYHLTNDIIHP*LFYRVVLRSSE
Trigger: TTCACTTGACCTCAGTACAACTCTGTAAAAGAGGCAGGGATGGATGATGTCATTTGTCAAATGGTAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp AAAGTTTCAAAAAGGTTCTATCACCAAGGTGTGCACTaGTCCCTAAACATAGCTCAACAAAGTTCTATCTGG +
Preference number: 3 (lower is better)
Translates to: KVSKRFYHQGVH*SLNIAQQSSIW
Trigger: CCAGATAGAACTTTGTTGAGCTATGTTTAGGGACCAGTGCACACCTTGGTGATAGAACCTTTTTGAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp ATTAGCTTCAATCAATCCCCATCATCCTTGTTCTTCTaGTACACGGATAATTCGTTGACACAACTGTATGAC +
Preference number: 3 (lower is better)
Translates to: ISFNQSPSSLFF*YTDNSLTQLYD
Trigger: GTCATACAGTTGTGTCAACGAATTATCCGTGTATCAGAAGAACAAGGATGATGGGGATTGATTGAAGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp GTTCCAATTAAATCACTCAAAAACGGCCGGAATGCATaGGGAAGGAATACTTCCAAAAATATAGGAATAGGG +
Preference number: 3 (lower is better)
Translates to: VPIKSLKNGRNA*GRNTSKNIGIG
Trigger: CCCTATTCCTATATTTTTGGAAGTATTCCTTCCTCATGCATTCCGGCCGTTTTTGAGTGATTTAATTGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 72 bp CTTGCTTACCATGGACGAAGATCAACAAATGCTCTATaGAACAAAACTAATCTTTGCTTGACCACCATCTGT +
Preference number: 3 (lower is better)
Translates to: LAYHGRRSTNAL*NKTNLCLTTIC
Trigger: ACAGATGGTGGTCAAGCAAAGATTAGTTTTGTTTCATAGAGCATTTGTTGATCTTCGTCCATGGTAAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR GCA 72 bp CTGCATATACCAAGCAATTATGATGTCTCAGAGTCCTaGTCCATAAAAAGAAGATACCTGTACTATCAACCT +
Preference number: 3 (lower is better)
Translates to: LHIPSNYDVSES*SIKRRYLYYQP
Trigger: AGGTTGATAGTACAGGTATCTTCTTTTTATGGAGCAGGACTCTGAGACATCATAATTGCTTGGTATATGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp TTTAAGATGTCTGCATGGGTATCAGAGCATAAAGCATaGAGTGAAAACGAAGAATATTCTCAGATCTTACGG +
Preference number: 3 (lower is better)
Translates to: FKMSAWVSEHKA*SENEEYSQILR
Trigger: CCGTAAGATCTGAGAATATTCTTCGTTTTCACTCCATGCTTTATGCTCTGATACCCATGCAGACATCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR-3UTR CAA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGGCATAAAGTCCAGCTaGAAGAACATCGCTTTAACT +
Preference number: 3 (lower is better)
Translates to: TRTAFETSMITKYAILQIGIKSS*KNIALT
Trigger: AGTTAAAGCGATGTTCTTCAAGCTGGACTTTATGCC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp CATCATCCTTGTTCTTCTGATACACGGATAATTCGTTaGCACAACTGTATGACCTGCTTTATTTCACTTACT +
Preference number: 3 (lower is better)
Translates to: HHPCSSDTRIIR*HNCMTCFISLT
Trigger: AGTAAGTGAAATAAAGCAGGTCATACAGTTGTGTCAACGAATTATCCGTGTATCAGAAGAACAAGGATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp ATTACTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATaGCATAGTTATTCAAGAGAAAGCAGCTATCAAAAC +
Preference number: 3 (lower is better)
Translates to: ITLLGAMQSGKR*HSYSRESSYQN
Trigger: GTTTTGATAGCTGCTTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR TCA 72 bp CCAAATACCCTAACATTGCTCCCTATCTTCAAAATCTaGGTTTCCCATCAAACTACAAAAGGAGTTCCAATT +
Preference number: 3 (lower is better)
Translates to: PNTLTLLPIFKI*VSHQTTKGVPI
Trigger: AATTGGAACTCCTTTTGTAGTTTGATGGGAAACTCAGATTTTGAAGATAGGGAGCAATGTTAGGGTATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR TCA 72 bp CCTAACTCCTTAACACCAATAATTCCAATACAATTGTaGAATCCTCAAGTTATGGAGAAAAAGGAGCATTTC +
Preference number: 3 (lower is better)
Translates to: PNSLTPIIPIQL*NPQVMEKKEHF
Trigger: GAAATGCTCCTTTTTCTCCATAACTTGAGGATTTCACAATTGTATTGGAATTATTGGTGTTAAGGAGTTAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CCA 72 bp TTAAGAAATCATCTCATGTCATGGTTTTCAAACCAATaGCACATTAATCTGATGGGCTTTAAAGAAGTGATG +
Preference number: 3 (lower is better)
Translates to: LRNHLMSWFSNQ*HINLMGFKEVM
Trigger: CATCACTTCTTTAAAGCCCATCAGATTAATGTGCCATTGGTTTGAAAACCATGACATGAGATGATTTCTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGTCCCTATGCCGTGGTaGAGCAGGGCCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLVPMPW*SRAPSH
Trigger: GTGGCTGGGGGCCCTGCTTCACCACGGCATAGGGAC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGGCCCCCAGCCACTCTaGAAACATGCCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRGPQPL*KHAWAL
Trigger: GAGGGCCCAGGCATGTTTGCAGAGTGGCTGGGGGCC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGTGTGGCCTGGGCAGTaGCCCAGATACCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRVWPGQ*PRYPSG
Trigger: CCCTGATGGGTATCTGGGCCACTGCCCAGGCCACAC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTTCCAACTGACCACCTaGACCGCGGCACAGGCACAC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRFQLTT*TAAQAH
Trigger: GTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCACAAAGGCTCTGTGTaGCCTGGGCAGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRHKGSV*PGQWPR
Trigger: TCTGGGCCACTGCCCAGGCCACACAGAGCCTTTGTG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACTGCACCCGTCCCTATaGCGTGGTGAAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLHPSL*RGEAGP
Trigger: GGGCCCTGCTTCACCACGGCATAGGGACGGGTGCAG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCACTCAAGCAGCCACTaGTCTCTGGAACTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRHSSSH*SLELGS
Trigger: GGAGCCTAGTTCCAGAGAGCAGTGGCTGCTTGAGTG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTGCACCCGTCCCTATaGCGTGGTGAAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLHPSL*RGEAGP
Trigger: GGGCCCTGCTTCACCACGGCATAGGGACGGGTGCAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTGGGAGGCTGAGGCATaGGAATTGCAGAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRWEAEA*ELQRLQ
Trigger: CTGCAATCTCTGCAATTCTCATGCCTCAGCCTCCCA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAGCTACTTGGGAGGCTaGGGCATGAGAATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRSYLGG*GMRIAE
Trigger: CTCTGCAATTCTCATGCCTCAGCCTCCCAAGTAGCT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTACCTTTCTTCCTACTaGACCCGTCCCTATGCCGTG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRYLSSY*TRPYAV
Trigger: CACGGCATAGGGACGGGTGCAGTAGGAAGAAAGGTA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCACAAAGGCTCTGTGTaGCCTGGGCAGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSHKGSV*PGQWPR
Trigger: TCTGGGCCACTGCCCAGGCCACACAGAGCCTTTGTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGTTGGGAGGCCGAGGTaGGAGGATCAGCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSVGRPR*EDQLRS
Trigger: ACTCCTGAGCTGATCCTCCCACCTCGGCCTCCCAAC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGCACACAGAATACAGTaGGTGGATGAAGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRAHRIQ*VDEAPC
Trigger: ACAGGGTGCTTCATCCACTCACTGTATTCTGTGTGC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAAACGGGCGGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQNGRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGTT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTACTGGAGTTTTGCCTCCCAGCACTTCTTGCAAACCCTGTGTCACCCCTTCTGCCTCCCAGCACTTCTTaGAAACCCTGTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: LLEFCLPALLANPVSPLLPPSTS*KPCVTP
Trigger: AGGGGTGACACAGGGTTTGCAAGAAGTGCTGGGAGG...CAGAAGGGGTGACACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTGGGAGGTGGAGGTTaGAGTGAGCGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLGGGG*SERRCH
Trigger: GTGGCATCTCCGCTCACTGCAACCTCCACCTCCCAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCAGTTGGAGAACCACTaGTGCAGAAAACTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLQLENH*CRKLGG
Trigger: TCCCCCAAGTTTTCTGCATCAGTGGTTCTCCAACTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCACCCTGTAGGCTATTaGGACCAAAGTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLHPVGY*DQSPYL
Trigger: GAGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCAGCCCGGGCAACAGTaGAAGACCCCGTCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSQPGQQ*KTPSEN
Trigger: ATTTTCAGACGGGGTCTTGCACTGTTGCCCGGGCTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCAAAGTCCTTACCTCTaGCTGCTTACATCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRQSPYL*LLTSLH
Trigger: GTGCAGAGATGTAAGCAGGCAGAGGTAAGGACTTTG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGCCACTCTGCAAACATaGCTGGGCCCTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSATLQT*LGPPLF
Trigger: GAACAAAGGAGGGCCCAGGCATGTTTGCAGAGTGGC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAAGCTGCACTCCAGTTaGAGAACCACTGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRKLHSS*RTTDAE
Trigger: TTCTGCATCAGTGGTTCTCCAACTGGAGTGCAGCTT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTTCAGAGATGCATGGTaGACCCAAAATCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRFRDAW*TQNPSS
Trigger: GCTCGATGGATTTTGGGTCCACCATGCATCTCTGAA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp ACGAGAAAGTGTAAATGCGCTTTCCCTTGCCCCTCTTaGGCCCACCATAAGCAAGTCCACACTCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TRKCKCAFPCPS*AHHKQVHTQAA
Trigger: GGCTGCTTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTTACACTTTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGGCAGGAGAATCATGTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVGRRIM*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCACATGATTCTCCTGCC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGTCCCTATGCCGTGGTaGAGCAGGGCCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNVPMPW*SRAPSH
Trigger: GTGGCTGGGGGCCCTGCTTCACCACGGCATAGGGAC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCTTGCTGGGCATCTTTaGGCACTGCTGATCACTGTT +
Preference number: 4 (lower is better)
Translates to: PHPRLTNTPLQHRQPKQQLAGHL*ALLITV
Trigger: AACAGTGATCAGCAGTGCTCAAAGATGCCCAGCAAG...CTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGGTATCCCTGACCGTTTaGAGAGAAGATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLVSLTV*REDEGR
Trigger: TCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTCCCTTGCCCCTCTTTaGCCCACCATAAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVSLAPL*PTISKS
Trigger: GGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGACCAAATGACACAATaGGCAAAGGCACCCTACAAT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRDQMTQ*AKAPYN
Trigger: ATTGTAGGGTGCCTTTGCCCATTGTGTCATTTGGTC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAGCCCCATGGTGGGTCTaGAACTCCATACACATTTCC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQAPWWV*NSIHIS
Trigger: GGAAATGTGTATGGAGTTCCAGACCCACCATGGGGC...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGTTGCTACTTCCTGGTaGAATGTTGTCCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVVATSW*NVVPCP
Trigger: GGGGCAAGGGACAACATTTCACCAGGAAGTAGCAAC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGCCCTGTGCACTATATaGTGCTTCAACTACGATTTT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRALCTI*CFNYDF
Trigger: AAAATCGTAGTTGAAGCATCATATAGTGCACAGGGC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTTTCTGGTCCTGATTTaGTGTGAGCCAACAATGATG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRFLVLI*CEPTMM
Trigger: CATCATTGTTGGCTCACATCAAATCAGGACCAGAAA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCAGCAAAACAAGAAGTaGAGGGAGATTCTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRQQNKK*REILGE
Trigger: TTCTCCTAGAATCTCCCTGCACTTCTTGTTTTGCTG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATCACCAAACAAACCCTaGTCTTCCCAACTCACAGGC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQSPNKP*SSQLTG
Trigger: GCCTGTGAGTTGGGAAGAGCAGGGTTTGTTTGGTGA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCCACCCTTCACAAGCTaGCAAGAGATGGACCTAACT +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSPPFTS*QEMDLT
Trigger: AGTTAGGTCCATCTCTTGGCAGCTTGTGAAGGGTGG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGTGTGGCCTGGGCAGTaGCCCAGATACCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFVWPGQ*PRYPSG
Trigger: CCCTGATGGGTATCTGGGCCACTGCCCAGGCCACAC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTATGAGGCCAGAAAAGTaGAAGCTACCTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSMRPEK*KLPAKG
Trigger: CCCTTTGGCAGGTAGCTTCCACTTTTCTGGCCTCAT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGTTCGAGACCAGCCTaGGTAAAATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSSRPA*VKWQNP
Trigger: GGGGTTTTGCCATTTTACCCAGGCTGGTCTCGAACT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAAAATCCATACCCAGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQKSIPS*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCTGGGTATGGATTT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACTCTGCAAACATGCCTaGGCCCTCCTTTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLCKHA*ALLCSH
Trigger: ATGTGAACAAAGGAGGGCCCAGGCATGTTTGCAGAG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGCCTCCCTCAGACCTTaGGTATTCACTAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSASLRP*VFTKVQ
Trigger: TTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTCATCTCCCTGTGCTTaGGTCAAGCTAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRSSPCA*VKLMKE
Trigger: TTCTTTCATTAGCTTGACCCAAGCACAGGGAGATGA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGAGAAAGCACAAACCTaGACATATAGAGGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQREKAQT*TYRGLN
Trigger: ATTTAGCCCTCTATATGTTCAGGTTTGTGCTTTCTC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCAGTTGGAGAACCACTaGTGCAGAAAACTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVQLENH*CRKLGG
Trigger: TCCCCCAAGTTTTCTGCATCAGTGGTTCTCCAACTG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTCCAGGGTATCACATaGTCCAGGTATCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSFQGIT*SRYLSL
Trigger: TAGGGAGAGATACCTGGATCATGTGATACCCTGGAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTCATCCTTGTTCTTCTaGTACACGGATAATTCGTTG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRSSLFF*YTDNSL
Trigger: CAACGAATTATCCGTGTATCAGAAGAACAAGGATGA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCTACCCAAGTTCTTCTaGCATGCAGAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLPKFF*HAEINL
Trigger: CAGATTGATTTCTGCATGTCAGAAGAACTTGGGTAG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAGAGACAAGTTCAGCTaGCCCATGAATGAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRRDKFS*PMNEKN
Trigger: ATTTTTCTCATTCATGGGTCAGCTGAACTTGTCTCT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATATCAGGGGTTCCAACTaGCCACCTGCACCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNIRGSN*PPAPRH
Trigger: GTGCCGCGGTGCAGGTGGTCAGTTGGAACCCCTGAT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGTCACCTATGAGACTATaGCACTGCATTAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRSPMRL*HCIKIR
Trigger: CCTGATTTTAATGCAGTGTCATAGTCTCATAGGTGA...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATATTTATGGGGGCCTTaGGGCTACCTTTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQYLWGP*GYLSSY
Trigger: GTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCTTACAAGAAGCCAGTaGAGAATTCACAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLTRSQ*RIHRCL
Trigger: CAGGCACCTGTGAATTCTTCACTGGCTTCTTGTAAG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGCTCATTTTATTGAGATaGGGAAACCAAGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRLILLR*GNQGPK
Trigger: TTTTGGGCCTTGGTTTCCTCATCTCAATAAAATGAG...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCCTTCCCTGCCCCCATCCATaGCATCCCACAGGACTGGTA +
Preference number: 4 (lower is better)
Translates to: TATQSFTAQRKTRKESSLPCPHP*HPTGLV
Trigger: TACCAGTCCTGTGGGATGTCATGGATGGGGGCAGGG...AAGGGAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTGGGAGGTGGAGGTTaGAGTGAGCGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLGGGG*SERRCH
Trigger: GTGGCATCTCCGCTCACTGCAACCTCCACCTCCCAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGAACTGTCCAAGTTGTaGACTGCACAAGGGTACCAC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVELSKL*TAQGYH
Trigger: GTGGTACCCTTGTGCAGTGCACAACTTGGACAGTTC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGAAAAAGCACTGCTCTaGGGGACGCATCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVEKALL*GTHQSK
Trigger: TTTGCTCTGATGCGTCCCGCAGAGCAGTGCTTTTTC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAGGCCCCCAGCCACTCTaGAAACATGCCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKGPQPL*KHAWAL
Trigger: GAGGGCCCAGGCATGTTTGCAGAGTGGCTGGGGGCC...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTCACCAAACAAACCCTaGTCTTCCCAACTCACAGGC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVSPNKP*SSQLTG
Trigger: GCCTGTGAGTTGGGAAGAGCAGGGTTTGTTTGGTGA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACCAGTCATCTCCCTGTaGTTGGGTCAAGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQPVISL*LGQANE
Trigger: TTCATTAGCTTGACCCAAGCACAGGGAGATGACTGG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGTATCCCTGACCGTTTaGAGAGAAGATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSVSLTV*REDEGR
Trigger: TCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGCACAACACCAACAATaGCAAGTTGTTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSAQHQQ*QVVSPQ
Trigger: CTGAGGCGAAACAACTTGGCATTGTTGGTGTTGTGC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGGTGATTCCCAAACTTaGCTACATTTTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRGDSQT*LHFRNA
Trigger: GGCATTTCTAAAATGTAGCCAAGTTTGGGAATCACC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAATACACTCCCCTTGTaGCATAAAGTCCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLNTLPL*HKVQLE
Trigger: TTCAAGCTGGACTTTATGCCACAAGGGGAGTGTATT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTCAGAGATGCATGGTaGACCCAAAATCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSFRDAW*TQNPSS
Trigger: GCTCGATGGATTTTGGGTCCACCATGCATCTCTGAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCATGAGGCCAGAAAAGTaGAAGCTACCTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVMRPEK*KLPAKG
Trigger: CCCTTTGGCAGGTAGCTTCCACTTTTCTGGCCTCAT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGCCAGGTTGCAGAGCTaGCTCCAAGCCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFARLQS*LQASLR
Trigger: TCTGAGGGAGGCTTGGAGCCAGCTCTGCAACCTGGC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp AGACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTaGCCTCCCAGCACTTCTTGCAAACCCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: RPPLVRILSTGV*PPSTSCKPCVT
Trigger: GGTGACACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR TCA 90 bp AAATATGTCCTAAAAGTCCCAGAACACAGCTCCAATTGTAAGTGCCAACCCCAGCACTTCCTTTTGGGTTaGGTTTCCGGAGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: KYVLKVPEHSSNCKCQPQHFLLG*VSGGSR
Trigger: CCTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTG...CTGGGGTTGGCACTTACAATTGGAGCTGTGTTCTGGGACTTTTAGGACATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGAGAACTATCAAAATaGGGCCACAGTGTACCAACC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSRELSK*GHSVPT
Trigger: GGTTGGTACACTGTGGCCTCATTTTGATAGTTCTCT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAACGGGCGGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFNGRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGTT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAACTCAAAAACTGCATaGGTATCCCTGACCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSNSKTA*VSLTVC
Trigger: GCAAACGGTCAGGGATACTCATGCAGTTTTTGAGTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGGGTTTTCTGGTCCTaGTTTGATGTGAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSRVFWS*FDVSQQ
Trigger: TTGTTGGCTCACATCAAATCAGGACCAGAAAACCCT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTTGGGATCGGCTATATaGCATCTCTGGGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLGSAI*HLWAME
Trigger: TTCCATTGCCCAGAGATGGCATATAGCCGATCCCAA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACGGAGATGCCACCACTaGACTCCAGCCCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKRRCHH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAGTGGTGGCATCTCCG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACTCTCTTGGGAGCAATaGAAAGTGGAAAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLSWEQ*KVERDD
Trigger: GTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCCTCTCTACACAAAATaGAAAAATGAGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSPLYTK*KNEPGV
Trigger: CACGCCTGGCTCATTTTTGCATTTTGTGTAGAGAGG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAAGTGATGAAGACAGCTaGTATCTACCCCATTCACAG +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQSDEDS*YLPHSQ
Trigger: CTGTGAATGGGGTAGATAGCAGCTGTCTTCATCACT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCACAGAATACAGTGAGTaGATGAAGCACCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVTEYSE*MKHPVG
Trigger: GCCTACAGGGTGCTTCATCCACTCACTGTATTCTGT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAATCATCTCATGTCATaGTTTTCAAACCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRNHLMS*FSNQWH
Trigger: GTGCCATTGGTTTGAAAACCATGACATGAGATGATT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGCCTCAACTAGAACCTaGATCTTCAACTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSASTRT*IFNFQL
Trigger: CAGTTGGAAGTTGAAGATCCAGGTTCTAGTTGAGGC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAGTGACTCAGCATTGGTaGTACTTAGGACCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: STTAQTAKATATQSFTAQVTQHW*YLGPRS
Trigger: AGACCTGGGTCCTAAGTACCACCAATGCTGAGTCAC...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp AACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCCTCACTTCCTTTTGGGTTaGGTTTCCGGAGGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: NSNTKFHRTKENQKRILPHFLLG*VSGGSR
Trigger: CCTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTG...AGGGAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGATCAGGGGTTCCAACTaGCCACCTGCACCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRIRGSN*PPAPRH
Trigger: GTGCCGCGGTGCAGGTGGTCAGTTGGAACCCCTGAT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTGGGGAAATCACCTATaGGACTATGACACTGCATTA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSWGNHL*DYDTAL
Trigger: TAATGCAGTGTCATAGTCTCATAGGTGATTTCCCCA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATATACCAAGCAATTATaGTGTCTCAGAGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQYTKQL*CLRVLL
Trigger: GAGCAGGACTCTGAGACATCATAATTGCTTGGTATA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTGCCCTGTGCACTATATaGTGCTTCAACTACGATTTT +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSALCTI*CFNYDF
Trigger: AAAATCGTAGTTGAAGCATCATATAGTGCACAGGGC...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAACCTACCCTTACAGATaGAGCCTTTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQTYPYR*SLLCCF
Trigger: AAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAGGT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATATACAGCACTTCCTTTTGGGTTGAGTTTCCGGAGGCTCGAGGGCAGCTAGGATGTGAATTCAGCCCCTaGATAACTGAAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: IYSTSFWVEFPEARGQLGCEFSP*ITEGHK
Trigger: TTTGTGTCCTTCAGTTATTCAGGGGCTGAATTCACA...TCCTAGCTGCCCTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTGCTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCACTTAAGAAGAGTCTaGATTAAGAGTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLHLRRV*IKSLSM
Trigger: CATGGAAAGACTCTTAATGCAGACTCTTCTTAAGTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAGTTAAAGCTTACATCTaGCTCTTCCTAACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQVKAYI*LFLTPS
Trigger: AGAAGGGGTTAGGAAGAGGCAGATGTAAGCTTTAAC...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAATAATCATTCAGAGATaGCCTAACCATCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQIIIQR*PNHQPF
Trigger: GAAGGGCTGATGGTTAGGGCATCTCTGAATGATTAT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACCGGGAGGCGGAGCTTaGAATGAGCCGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKPGGGA*NEPRLH
Trigger: GTGCAATCTCGGCTCATTGCAAGCTCCGCCTCCCGG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCAGGTAGCAACCAAATaGCTTGCTTTGGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: VSLTVCREDEGRAPVISLQVATK*LALENK
Trigger: TTTATTTTCCAAAGCAAGGCATTTGGTTGCTACCTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATAGGAGAGGCCAGGAATaGAGGTTTCACGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNRRGQE*RFHAQL
Trigger: GAGCTGGGCGTGAAACCTGCATTCCTGGCCTCTCCT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTTCTACTTCAGAGATaGATGGTGGACCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLLLQR*MVDPKS
Trigger: GGATTTTGGGTCCACCATGCATCTCTGAAGTAGAAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATGTGATAACACCATGTaGTTAACACAGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQCDNTM*LTQCKG
Trigger: GCCTTTGCACTGTGTTAAGCACATGGTGTTATCACA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTGTGATAACACCATGTaGTTAACACAGTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSCDNTM*LTQCKG
Trigger: GCCTTTGCACTGTGTTAAGCACATGGTGTTATCACA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATTATGCTGCTTTGCTTaGCCTGTGCACTATATGATG +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLCCFA*PVHYMM
Trigger: CATCATATAGTGCACAGGGCAAGCAAAGCAGCATAA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATATGTCCTAAAAGTCCCAGAACACAGCTCCAATTGTAAGTGCCAACCCCAGAGCTCCAATTGTAAGTaGCAACCCCAGACCACCCCA +
Preference number: 4 (lower is better)
Translates to: KYVLKVPEHSSNCKCQPQSSNCK*QPQTTP
Trigger: TGGGGTGGTCTGGGGTTGGCACTTACAATTGGAGCT...CTGGGGTTGGCACTTACAATTGGAGCTGTGTTCTGGGACTTTTAGGACATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCACTCTCACAACTCTTaGGCAAAGTACAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSHSHNS*AKYSYF
Trigger: GAAATAGCTGTACTTTGCCCAAGAGTTGTGAGAGTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATACTGGGGCCCCATGGTaGGTCTGGAACTCCATACAC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNTGAPW*VWNSIH
Trigger: GTGTATGGAGTTCCAGACCCACCATGGGGCCCCAGT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGAAATCCTCAAGTTATaGAGAAAAAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: AGFTPSSATIQLCGDRQREILKL*RKRSIS
Trigger: AGAAATGCTCCTTTTTCTCCATAACTTGAGGATTTC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCTTTCTTGCTTACCATaGACGAAGATCAACAAATGC +
Preference number: 4 (lower is better)
Translates to: PHPRLTNTPLQHRQPKQQLSCLP*TKINKC
Trigger: GCATTTGTTGATCTTCGTCCATGGTAAGCAAGAAAG...CTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp CAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACAAACCAAAAAGCTCTaGGCATCAGGCAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: QHRQPKQQQHKVSPHKGKQTKKL*ASGNSS
Trigger: GCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTG...TTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR TCA 90 bp AGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCTTCCCCACCCCAGACTaGCAAATACTCCACTACAGC +
Preference number: 4 (lower is better)
Translates to: SNSNTKFHRTKENQKRILFPTPD*QILHYS
Trigger: GCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAA...GAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCCTAACTCCCACAAATaGCTCCAGGAAAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFPNSHK*LQERET
Trigger: GGTCTCCCTTTCCTGGAGTCATTTGTGGGAGTTAGG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648594.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAAATCATGCCAAACATaGCTCCATGCAGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSKSCQT*LHAENY
Trigger: ATAGTTCTCTGCATGGAGTCATGTTTGGCATGATTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTCATCCTTGTTCTTCTaGTACACGGATAATTCGTTG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSSSLFF*YTDNSL
Trigger: CAACGAATTATCCGTGTATCAGAAGAACAAGGATGA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTATACCAAGCAATTATaGTGTCTCAGAGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVYTKQL*CLRVLL
Trigger: GAGCAGGACTCTGAGACATCATAATTGCTTGGTATA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTTACCATTTGACAAATaGCATCATCCATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLPFDK*HHPSLP
Trigger: AGGCAGGGATGGATGATGTCATTTGTCAAATGGTAA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAGAAACTCATTTTATTaGGATGAGGAAACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSRNSFY*DEETKA
Trigger: GGCCTTGGTTTCCTCATCTCAATAAAATGAGTTTCT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCACTTCTTGCAAACCCTGTGTCACCCCTTCTGACTTTCCACTGATTTTTCAGTGTCTACTGGAGTTTTaGCTCCCAGCACTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: STSCKPCVTPSDFPLIFQCLLEF*LPALLA
Trigger: TGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACA...CTGAAAAATCAGTGGAAAGTCAGAAGGGGTGACACAGGGTTTGCAAGAAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCAGCAAAACAAGAAGTaGAGGGAGATTCTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVQQNKK*REILGE
Trigger: TTCTCCTAGAATCTCCCTGCACTTCTTGTTTTGCTG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTACCGAGAAAAAGCACTaGTCTGCGGGACGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFTEKKH*SAGRIR
Trigger: TCTGATGCGTCCCGCAGAGCAGTGCTTTTTCTCGGT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTCCCTTGCCCCTCTTTaGCCCACCATAAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNSLAPL*PTISKS
Trigger: GGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGCCCCATGGTGGGTCTaGAACTCCATACACATTTCC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFAPWWV*NSIHIS
Trigger: GGAAATGTGTATGGAGTTCCAGACCCACCATGGGGC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAACTGGGGCCCCATGGTaGGTCTGGAACTCCATACAC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKTGAPW*VWNSIH
Trigger: GTGTATGGAGTTCCAGACCCACCATGGGGCCCCAGT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAAGACATCCCACAGGACTaGTACCCACATGTCACATTA +
Preference number: 4 (lower is better)
Translates to: QHRQPKQQQHKVSPHKGKDIPQD*YPHVTL
Trigger: TAATGTGACATGTGGGTACCAGTCCTGTGGGATGTC...TTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp CCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGTTTAAGATGTCTGCATaGGTATCAGAGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: PHPRLTNTPLQHRQPKQQFKMSA*VSEHKA
Trigger: TGCTTTATGCTCTGATACCCATGCAGACATCTTAAA...CTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp TTAGAATCTTGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCAAACCCTGTGCTGTGTCACCCCTTCTaGCTTTCCACTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LESCLLEFCLPALLANPVLCHPF*LSTDFS
Trigger: TGAAAAATCAGTGGAAAGTCAGAAGGGGTGACACAG...CACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGAGAAAGCACAAACCTaGACATATAGAGGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVEKAQT*TYRGLN
Trigger: ATTTAGCCCTCTATATGTTCAGGTTTGTGCTTTCTC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCATTTCCTTCCACCATaGGCAGTGAGCTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFHFLPP*AVSFLN
Trigger: GTTCAGGAAGCTCACTGCTCATGGTGGAAGGAAATG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTGATAGTAGTAGTTTaGGATAACCAACTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLIVVV*DNQLGV
Trigger: CACACCTAGTTGGTTATCTCAAACTACTACTATCAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAAATCATGCCAAACATaGCTCCATGCAGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVKSCQT*LHAENY
Trigger: ATAGTTCTCTGCATGGAGTCATGTTTGGCATGATTT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCCTGGAAAGAAAACATaGTTGGGCCATGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSPGKKT*LGHVIK
Trigger: TTTAATTACATGGCCCAATCATGTTTTCTTTCCAGG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTGGGAGGCTGAGGCATaGGAATTGCAGAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNWEAEA*ELQRLQ
Trigger: CTGCAATCTCTGCAATTCTCATGCCTCAGCCTCCCA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAATGCACAAATTACCTaGTGGCAGCAAAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVNAQIT*WQQNKK
Trigger: CTTCTTGTTTTGCTGCCATCAGGTAATTTGTGCATT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTCACCTATGAGACTATaGCACTGCATTAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVSPMRL*HCIKIR
Trigger: CCTGATTTTAATGCAGTGTCATAGTCTCATAGGTGA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCTCATTTTATTGAGATaGGGAAACCAAGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLILLR*GNQGPK
Trigger: TTTTGGGCCTTGGTTTCCTCATCTCAATAAAATGAG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCAGAAACTCATTTTATTaGGATGAGGAAACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVRNSFY*DEETKA
Trigger: GGCCTTGGTTTCCTCATCTCAATAAAATGAGTTTCT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAGACCAAGTTCCCTTTTaGAATAGTAATCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: SSPPQTDKYSTTAQTAKADQVPF*NSNPNQ
Trigger: TTGGTTTGGATTACTATTGCAAAAGGGAACTTGGTC...TGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACACTCAAGCAGCCACTaGTCTCTGGAACTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKHSSSH*SLELGS
Trigger: GGAGCCTAGTTCCAGAGAGCAGTGGCTGCTTGAGTG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATTCCAACTGACCACCTaGACCGCGGCACAGGCACAC +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIFQLTT*TAAQAH
Trigger: GTGTGCCTGTGCCGCGGTGCAGGTGGTCAGTTGGAA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACAGGTAGCAACCAAATaGCTTGCTTTGGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQQVATK*LALENK
Trigger: TTTATTTTCCAAAGCAAGGCATTTGGTTGCTACCTG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCAAGGCAGTACTATTTaGTCACAAAATAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSQGSTI*SQNRSV
Trigger: CACAGATCTATTTTGTGAGCAAATAGTACTGCCTTG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAGGAGAGGCCAGGAATaGAGGTTTCACGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRRRGQE*RFHAQL
Trigger: GAGCTGGGCGTGAAACCTGCATTCCTGGCCTCTCCT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTATTCTCAGGTCCCATTaGATACTTACAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSILRSH*ILTDSE
Trigger: TTCTGAATCTGTAAGTATGCAATGGGACCTGAGAAT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAGCCACTCTGCAAACATaGCTGGGCCCTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKATLQT*LGPPLF
Trigger: GAACAAAGGAGGGCCCAGGCATGTTTGCAGAGTGGC...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTATTTCCAACTCTGGCTaGATATACCAAGCAATTATG +
Preference number: 4 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSISNSG*IYQAIM
Trigger: CATAATTGCTTGGTATATGCAGCCAGAGTTGGAAAT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCCACCCTTCACAAGCTaGCAAGAGATGGACCTAACT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFPPFTS*QEMDLT
Trigger: AGTTAGGTCCATCTCTTGGCAGCTTGTGAAGGGTGG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCACTATCCTGGTTGAATTaGCCAAGAAACAGTATAGTA +
Preference number: 4 (lower is better)
Translates to: SSPPQTDKYSTTAQTAKALSWLN*PRNSIV
Trigger: TACTATACTGTTTCTTGGGCAATTCAACCAGGATAG...TGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGTTGGGAGGCCGAGGTaGGAGGATCAGCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIVGRPR*EDQLRS
Trigger: ACTCCTGAGCTGATCCTCCCACCTCGGCCTCCCAAC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTCTGCAAACATGCCTaGGCCCTCCTTTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLCKHA*ALLCSH
Trigger: ATGTGAACAAAGGAGGGCCCAGGCATGTTTGCAGAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGCCAGGTTGCAGAGCTaGCTCCAAGCCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIARLQS*LQASLR
Trigger: TCTGAGGGAGGCTTGGAGCCAGCTCTGCAACCTGGC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTAGCACTGGGGCCCCATaGTGGGTCTGGAACTCCATA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSSTGAP*WVWNSI
Trigger: TATGGAGTTCCAGACCCACCATGGGGCCCCAGTGCT...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp TACTTCACCAAATTGAGACCACCACTCGTTAGAATCTaGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YFTKLRPPLVRI*STGVLPPSTSC
Trigger: GCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR TCA 90 bp CTAAATCTGAAGCCACAAGTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTTTCCCCACCCCAGACTaGCAAATACTCCACTACAGC +
Preference number: 4 (lower is better)
Translates to: LNLKPQVYHPRLFHMFFSFPTPD*QILHYS
Trigger: GCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAA...ACTAAAGAACATGTGAAACAACCTTGGGTGGTAAACTTGTGGCTTCAGATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp TTAGAATCTTGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCAAACCCTGTGCATACTTCACCAAATTaGGACCACCACTCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LESCLLEFCLPALLANPVHTSPN*DHHSLE
Trigger: TTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATG...CACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAGTTTCAATCCTTCTTaGGCAGGGCCCTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFSFNPS*AGPLFC
Trigger: GCAAAACAAGGGCCCTGCTCAAGAAGGATTGAAACT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCACCTGAGCCCAATCTaGAGGCTAGAGACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNHLSPI*RLETSS
Trigger: TGAACTTGTCTCTAGCCTTCAGATTGGGCTCAGGTG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATCACCCTGTAGGCTATTaGGACCAAAGTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNHPVGY*DQSPYL
Trigger: GAGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTG...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTTGCCCTATTAGGCATGTCTGCTCAGTGTTCAAACTTCAAAGCACCAGTACCAGTTTTAACACAACCCTaGCCACTACGAATCATTCAG +
Preference number: 4 (lower is better)
Translates to: LALLGMSAQCSNFKAPVPVLTQP*PLRIIQ
Trigger: CTGAATGATTCGTAGTGGTCAGGGTTGTGTTAAAAC...TGGTACTGGTGCTTTGAAGTTTGAACACTGAGCAGACATGCCTAATAGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp CTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTGCAGTCCGGATTAAATaGGCTGAATTCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTNTPLQHRQPKQQQHKVAVRIK*AEFTEA
Trigger: TGCTTCTGTGAATTCAGCTCATTTAATCCGGACTGC...AACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp TATCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGGACCAAGTTCCCTTTTaGAATAGTAATCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: YLPHPRLTNTPLQHRQPKDQVPF*NSNPNQ
Trigger: TTGGTTTGGATTACTATTGCAAAAGGGAACTTGGTC...CTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR GCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCCATCGAGCATTTATTTaGTTTTGGGGAAATCACCTA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVHRAFI*FWGNHL
Trigger: TAGGTGATTTCCCCAAAAGCAAATAAATGCTCGATG...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGAAAAAGCACTGCTCTaGGGGACGCATCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNEKALL*GTHQSK
Trigger: TTTGCTCTGATGCGTCCCGCAGAGCAGTGCTTTTTC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATACCTTTCTTCCTACTaGACCCGTCCCTATGCCGTG +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKYLSSY*TRPYAV
Trigger: CACGGCATAGGGACGGGTGCAGTAGGAAGAAAGGTA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGAATTCACAGGTGCCTaGCCACCCTTCACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGREFTGA*PPFTSC
Trigger: GCAGCTTGTGAAGGGTGGGCAGGCACCTGTGAATTC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAAAGGTATGGCAACTTaGCCAAGGAAACTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFKGMAT*PRKLWC
Trigger: GCACCAGAGTTTCCTTGGGCAAGTTGCCATACCTTT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CCAAACCAAAAAGCTCTGAGCATCAGGCAACTCAAGCAGCAGAACGTTAAAACACAAAAACGGCCGGAATaGATGAGGAAGGAATACTTC +
Preference number: 4 (lower is better)
Translates to: PNQKALSIRQLKQQNVKTQKRPE*MRKEYF
Trigger: GAAGTATTCCTTCCTCATGCATTCCGGCCGTTTTTG...TGTTTTAACGTTCTGCTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTTAATAAGCTACCGTTaGCATGGTTCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVLISYR*HGSNAT
Trigger: TGTTGCATTTGAACCATGCCAACGGTAGCTTATTAA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCTTTACATTACTCTCTTaGGAGCAATGCAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVFTLLS*EQCKVE
Trigger: TTCCACTTTGCATTGCTCCCAAGAGAGTAATGTAAA...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGCCTCCCTCAGACCTTaGGTATTCACTAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNASLRP*VFTKVQ
Trigger: TTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAAGATTTCAGAGTAAACTaGTTTCCCAGAACGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QHRQPKQQQHKVSPHKGKDFRVN*FPRTER
Trigger: CCTTTCCGTTCTGGGAAACCAGTTTACTCTGAAATC...TTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CAA 72 bp TCATCTCAATACAACATTGTGTATGAACTGTCCAAGTaGTGCACTGCACAAGGGTACCACATCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSQYNIVYELSK*CTAQGYHIQGS
Trigger: ACTGCCTTGGATGTGGTACCCTTGTGCAGTGCACAACTTGGACAGTTCATACACAATGTTGTATTGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp TGCTATCTACCCCATTCACAGATGAGTACCTTCTACTaGCCAGGCACTATGCTAAGAACCTCACATATAGCA +
Preference number: 4 (lower is better)
Translates to: CYLPHSQMSTFY*PGTMLRTSHIA
Trigger: TGCTATATGTGAGGTTCTTAGCATAGTGCCTGGCAAGTAGAAGGTACTCATCTGTGAATGGGGTAGATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTAAATCTGAAGCCACAAGTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTGTTGCTCTAAGGTGGTaGGTAAAAAGACGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNLKPQVYHPRLFHMFFSVALRW*VKRRRG
Trigger: GCCTCTGCGTCTTTTTACTCACCACCTTAGAGCAAC...ACTAAAGAACATGTGAAACAACCTTGGGTGGTAAACTTGTGGCTTCAGATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACATTTCCTTCCACCATaGGCAGTGAGCTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKHFLPP*AVSFLN
Trigger: GTTCAGGAAGCTCACTGCTCATGGTGGAAGGAAATG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGTTGCTACTTCCTGGTaGAATGTTGTCCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSVATSW*NVVPCP
Trigger: GGGGCAAGGGACAACATTTCACCAGGAAGTAGCAAC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACTGCATGAGTATCCCTaGCCGTTTGCAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLHEYP*PFAEKM
Trigger: CATCTTCTCTGCAAACGGTCAGGGATACTCATGCAG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGAGGAAGCCCCTCACTaGTACAGCAGTTTAAGACCC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGREEAPH*YSSLRP
Trigger: GGGTCTTAAACTGCTGTATCAGTGAGGGGCTTCCTC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGAGGAAGCCCCTCACTaGTACAGCAGTTTAAGACCC +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSEEAPH*YSSLRP
Trigger: GGGTCTTAAACTGCTGTATCAGTGAGGGGCTTCCTC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAATCTTTGAGCACTGCTaGTCACTGTTAGAAATAACT +
Preference number: 4 (lower is better)
Translates to: STTAQTAKATATQSFTAQIFEHC*SLLEIT
Trigger: AGTTATTTCTAACAGTGATCAGCAGTGCTCAAAGAT...TTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp ACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCCCTTGCCTCGAAGTTATTTTaGGGGATATCCCAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: TATQSFTAQRKTRKESSLASKLF*GISQLS
Trigger: GCTTAACTGGGATATCCCTCAAAATAACTTCGAGGC...AAGGGAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATACGAGAAAGTGTAAATaGGCTTTCCCTTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNTRKCK*AFPCPS
Trigger: AGAGGGGCAAGGGAAAGCGCATTTACACTTTCTCGT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTGGGATCGGCTATATaGCATCTCTGGGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNLGSAI*HLWAME
Trigger: TTCCATTGCCCAGAGATGGCATATAGCCGATCCCAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTCTCTTGGGAGCAATaGAAAGTGGAAAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLSWEQ*KVERDD
Trigger: GTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTACCGAGAAAAAGCACTaGTCTGCGGGACGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSTEKKH*SAGRIR
Trigger: TCTGATGCGTCCCGCAGAGCAGTGCTTTTTCTCGGT...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGCACAACACCAACAATaGCAAGTTGTTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNAQHQQ*QVVSPQ
Trigger: CTGAGGCGAAACAACTTGGCATTGTTGGTGTTGTGC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAGTGATGAAGACAGCTaGTATCTACCCCATTCACAG +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFSDEDS*YLPHSQ
Trigger: CTGTGAATGGGGTAGATAGCAGCTGTCTTCATCACT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGAATTCACAGGTGCCTaGCCACCCTTCACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIEFTGA*PPFTSC
Trigger: GCAGCTTGTGAAGGGTGGGCAGGCACCTGTGAATTC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAATATGTCCTAAAAGTCCCAGAACACAGCTCCAATTGTAAGTGCCAACCCCAGACACATGGGGTTTCATaGCATTCTTACCTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: KYVLKVPEHSSNCKCQPQTHGVS*HSYLCK
Trigger: CTTACACAGGTAAGAATGGCATGAAACCCCATGTGT...CTGGGGTTGGCACTTACAATTGGAGCTGTGTTCTGGGACTTTTAGGACATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp CCAAACCAAAAAGCTCTGAGCATCAGGCAACTCAAGCAGCAGAACGTTAAAACACACTGCAATTCTTTCTaGACATCTAGGAACCAACTC +
Preference number: 4 (lower is better)
Translates to: PNQKALSIRQLKQQNVKTHCNSF*TSRNQL
Trigger: GAGTTGGTTCCTAGATGTGCAGAAAGAATTGCAGTG...TGTTTTAACGTTCTGCTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATACAGAATACAGTGAGTaGATGAAGCACCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNTEYSE*MKHPVG
Trigger: GCCTACAGGGTGCTTCATCCACTCACTGTATTCTGT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAATATGTCCTAAAAGTCCCAGAACACAGCTCCAATTGTAAGTGCCAACCCCAGTGTTCATATTCTTGCTaGGCATCTTTGAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: KYVLKVPEHSSNCKCQPQCSYSC*ASLSTA
Trigger: AGCAGTGCTCAAAGATGCCCAGCAAGAATATGAACA...CTGGGGTTGGCACTTACAATTGGAGCTGTGTTCTGGGACTTTTAGGACATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp ACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACTAATTCCCTATCCTaGTTGAATTGCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: TAQTAKATATQSFTAQRKTNSLS*LNCPRN
Trigger: GTTTCTTGGGCAATTCAACCAGGATAGGGAATTAGT...TTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp CTAAATCTGAAGCCACAAGTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTAGTGTGACTCAGCATTaGTGGTACTTAGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: LNLKPQVYHPRLFHMFFSSVTQH*WYLGPR
Trigger: CCTGGGTCCTAAGTACCACCAATGCTGAGTCACACT...ACTAAAGAACATGTGAAACAACCTTGGGTGGTAAACTTGTGGCTTCAGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
3UTR CAA 72 bp AACCTCATTCCAAGATGTAGGGCATACTTCACCAAATaGAGACCACCACTCGTTAGAATCTTGTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: NLIPRCRAYFTK*RPPLVRILSTG
Trigger: TCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGCCCTACATCTTGGAATGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498236.1
3UTR CAA 72 bp CTACCCTTACAGATGAAGCCTTTTATGCTGCTTTGCTaGCCCTGTGCACTATATGATGCTTCAACTACGATT +
Preference number: 4 (lower is better)
Translates to: LPLQMKPFMLLC*PCALYDASTTI
Trigger: AATCGTAGTTGAAGCATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp CAAATCCCAGTTCCCTCACTTACTAGCTCTGAATTCTaGGACAAGCTAGCTCTGAATTCTTGGACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QIPVPSLTSSEF*DKLALNSWTSF
Trigger: AAAGCTTGTCCAAGAATTCAGAGCTAGCTTGTCCAAGAATTCAGAGCTAGTAAGTGAGGGAACTGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp TCACAGAGAATGCAACACTCAGAGCATTTAAGTTACTaGCCTGAAGACATAGATCAAGTTAGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SQRMQHSEHLSY*PEDIDQVSGRA
Trigger: GGCTCTGCCACTAACTTGATCTATGTCTTCAGGCAAGTAACTTAAATGCTCTGAGTGTTGCATTCTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACCACTCCTCAATATCTaGAAAGTAAGAGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKPLLNI*KVRDGG
Trigger: CCCTCCGTCTCTTACTTTTCAGATATTGAGGAGTGG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATACACGGATAATTCGTTaGCACAACTGTATGACCTGC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNTRIIR*HNCMTC
Trigger: GCAGGTCATACAGTTGTGTCAACGAATTATCCGTGT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAAGTTTCAATCCTTCTTaGGCAGGGCCCTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKSFNPS*AGPLFC
Trigger: GCAAAACAAGGGCCCTGCTCAAGAAGGATTGAAACT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGCACACAGAATACAGTaGGTGGATGAAGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRAHRIQ*VDEAPC
Trigger: ACAGGGTGCTTCATCCACTCACTGTATTCTGTGTGC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAAGCTACTTGGGAGGCTaGGGCATGAGAATTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQISYLGG*GMRIAE
Trigger: CTCTGCAATTCTCATGCCTCAGCCTCCCAAGTAGCT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTCTGCATGAGTATCCCTaGCCGTTTGCAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSLHEYP*PFAEKM
Trigger: CATCTTCTCTGCAAACGGTCAGGGATACTCATGCAG...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATAACTCAAAAACTGCATaGGTATCCCTGACCGTTTGC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNNSKTA*VSLTVC
Trigger: GCAAACGGTCAGGGATACTCATGCAGTTTTTGAGTT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGGTCCTGATTTGATGTaGGCCAACAATGATGACAGT +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNGPDLM*ANNDDS
Trigger: ACTGTCATCATTGTTGGCTCACATCAAATCAGGACC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACTTACAAGAAGCCAGTaGAGAATTCACAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLTRSQ*RIHRCL
Trigger: CAGGCACCTGTGAATTCTTCACTGGCTTCTTGTAAG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTAAATCTGAAGCCACAAGTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTAACGGCCGGAATGCATaGGGAAGGAATACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LNLKPQVYHPRLFHMFFSNGRNA*GRNTSK
Trigger: TTTGGAAGTATTCCTTCCTCATGCATTCCGGCCGTT...ACTAAAGAACATGTGAAACAACCTTGGGTGGTAAACTTGTGGCTTCAGATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp AAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCAGGAGAGTAGATAACTaGCCAAAAACTTCACCTCAA +
Preference number: 4 (lower is better)
Translates to: KYSTTAQTAKATATQSFTRRVDN*PKTSPQ
Trigger: TTGAGGTGAAGTTTTTGGTCAGTTATCTACTCTCCT...GGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGTTAAAGCTTACATCTaGCTCTTCCTAACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFVKAYI*LFLTPS
Trigger: AGAAGGGGTTAGGAAGAGGCAGATGTAAGCTTTAAC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGAACTGTCCAAGTTGTaGACTGCACAAGGGTACCAC +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSELSKL*TAQGYH
Trigger: GTGGTACCCTTGTGCAGTGCACAACTTGGACAGTTC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAAAAGGTATGGCAACTTaGCCAAGGAAACTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKKGMAT*PRKLWC
Trigger: GCACCAGAGTTTCCTTGGGCAAGTTGCCATACCTTT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ACATCAGTTACAAGTCCCATTCCAAATACCCTAACATTGCTCCCTATCTTCAAATACAGCACTTCCTTTTaGGTTGAGTTTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TSVTSPIPNTLTLLPIFKYSTSF*VEFPEA
Trigger: AGCCTCCGGAAACTCAACCCAAAAGGAAGTGCTGTA...TTTGAAGATAGGGAGCAATGTTAGGGTATTTGGAATGGGACTTGTAACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAAATCCATACCCAGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRKSIPS*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCTGGGTATGGATTT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGCCTCAACTAGAACCTaGATCTTCAACTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNASTRT*IFNFQL
Trigger: CAGTTGGAAGTTGAAGATCCAGGTTCTAGTTGAGGC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp CAACAATGCCAAGTTGTTTCGCCTCAGTTTTACCATTaGACAAATGACATCATCCATCCCTGCCTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: QQCQVVSPQFYH*TNDIIHPCLFY
Trigger: GTAAAAGAGGCAGGGATGGATGATGTCATTTGTCAAATGGTAAAACTGAGGCGAAACAACTTGGCATTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTAGGTCACCCCTTTTCCATAAGGTTTGTCATGCAATTACAATTAACAATTGATGTTGCTCTAAGGTGGTaGGTAAAAAGACGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGHPFSIRFVMQLQLTIDVALRW*VKRRRG
Trigger: GCCTCTGCGTCTTTTTACTCACCACCTTAGAGCAAC...ATCAATTGTTAATTGTAATTGCATGACAAACCTTATGGAAAAGGGGTGACCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCCACTCCTCAATATCTaGAAAGTAAGAGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRPLLNI*KVRDGG
Trigger: CCCTCCGTCTCTTACTTTTCAGATATTGAGGAGTGG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGTTCCAGGGTATCACATaGTCCAGGTATCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRFQGIT*SRYLSL
Trigger: TAGGGAGAGATACCTGGATCATGTGATACCCTGGAA...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGACCATCAGCCCTTCCTaGAAGATGATGGAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRTISPS*KMMELL
Trigger: TAGCAACTCCATCATCTTTCAGGAAGGGCTGATGGT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAAGGTGGAGGCACTTTaGAAAAAGACTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFKVEAL*KKTHSS
Trigger: ACTACTATGAGTCTTTTTTCAAAGTGCCTCCACCTT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAGAGACAAGTTCAGCTaGCCCATGAATGAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFRDKFS*PMNEKN
Trigger: ATTTTTCTCATTCATGGGTCAGCTGAACTTGTCTCT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTTATTTATGGGGGCCTTaGGGCTACCTTTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSYLWGP*GYLSSY
Trigger: GTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATA...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATACCTACCCTTACAGATaGAGCCTTTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNTYPYR*SLLCCF
Trigger: AAAGCAGCATAAAAGGCTTCATCTGTAAGGGTAGGT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTTCTGGTCCTGATTTaGTGTGAGCCAACAATGATG +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNFLVLI*CEPTMM
Trigger: CATCATTGTTGGCTCACATCAAATCAGGACCAGAAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TCACATCGTCTCTTGCAAGTTTATGCTTATCTGAACCTTTCCTGTAAGGTTTTTTCCAACATGACAGTGTaGCTCAGCATTGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SHRLLQVYAYLNLSCKVFSNMTV*LSIGGT
Trigger: AGTACCACCAATGCTGAGTCACACTGTCATGTTGGA...AAAAACCTTACAGGAAAGGTTCAGATAAGCATAAACTTGCAAGAGACGATGTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp ATGTCTGCATGGGTATCAGAGCATAAAGCATGGAGTGAAAACGAAGAATATTCTAATGGGGTCCTAGAATaGGTTTTAGCAAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: MSAWVSEHKAWSENEEYSNGVLE*VLASSP
Trigger: TGGACTGCTTGCTAAAACTCATTCTAGGACCCCATT...AGAATATTCTTCGTTTTCACTCCATGCTTTATGCTCTGATACCCATGCAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp AATATAGGAATAGGGACACTATATAAAGCACGCTTGAGAACTGTGGCAGAAATACAGCCCCTGAATAACTaGAGGACACAAATAGCAGAC +
Preference number: 4 (lower is better)
Translates to: NIGIGTLYKARLRTVAEIQPLNN*RTQIAD
Trigger: GTCTGCTATTTGTGTCCTTCAGTTATTCAGGGGCTG...TATTTCTGCCACAGTTCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp CCAAACCAAAAAGCTCTGAGCATCAGGCAACTCAAGCAGCAGAACGTTAAAACATCAAGCAAGGTTAACTaGGCAGGAAAGCAATTTTTA +
Preference number: 4 (lower is better)
Translates to: PNQKALSIRQLKQQNVKTSSKVN*AGKQFL
Trigger: TAAAAATTGCTTTCCTGCTCAGTTAACCTTGCTTGA...TGTTTTAACGTTCTGCTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGGGTATTCACTAAGGTaGAACTTTCTCACCAAACAA +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFGYSLR*NFLTKQ
Trigger: TTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTCCAGTCATCTCCCTGTaGTTGGGTCAAGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSPVISL*LGQANE
Trigger: TTCATTAGCTTGACCCAAGCACAGGGAGATGACTGG...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CCAAACCAAAAAGCTCTGAGCATCAGGCAACTCAAGCAGCAGAACGTTAAAACATCTCTTGCAAGTTTATaGTTATCTGAACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PNQKALSIRQLKQQNVKTSLASL*LSEPFL
Trigger: CAGGAAAGGTTCAGATAAGCATAAACTTGCAAGAGA...TGTTTTAACGTTCTGCTGCTTGAGTTGCCTGATGCTCAGAGCTTTTTGGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAACCTATTAGGCATGTCTaGTCAGTGTTCAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: TAKATATQSFTAQRKTRKPIRHV*SVFKLQ
Trigger: TTGAAGTTTGAACACTGAGCAGACATGCCTAATAGG...TTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp CAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAATCAAAACAGTTGCTATaGATGAGAAGGTGTAAAATC +
Preference number: 4 (lower is better)
Translates to: QHRQPKQQQHKVSPHKGKSKQLL*MRRCKI
Trigger: GATTTTACACCTTCTCATGCATAGCAACTGTTTTGA...TTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGGTGATTCCCAAACTTaGCTACATTTTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFGDSQT*LHFRNA
Trigger: GGCATTTCTAAAATGTAGCCAAGTTTGGGAATCACC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTAAATCATACTCCCTaGAGAATATCACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLNHTP*RISLTF
Trigger: GAAGGTGAGTGATATTCTCCAGGGAGTATGATTTAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGCCATCTCTGGGCAATaGAATACGAGAAAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNAISGQ*NTRKCK
Trigger: TTTACACTTTCTCGTATTCCATTGCCCAGAGATGGC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAAGTTCGAGACCAGCCTaGGTAAAATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQISSRPA*VKWQNP
Trigger: GGGGTTTTGCCATTTTACCCAGGCTGGTCTCGAACT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTGACCATAAATACACATaGGGTTTCATGCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: LTNTPLQHRQPKQQQHKVDHKYT*GFMPFL
Trigger: TAAGAATGGCATGAAACCCCATGTGTATTTATGGTC...AACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGACACGGATAATTCGTTaGCACAACTGTATGACCTGC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRTRIIR*HNCMTC
Trigger: GCAGGTCATACAGTTGTGTCAACGAATTATCCGTGT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATAATGCACAAATTACCTaGTGGCAGCAAAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNNAQIT*WQQNKK
Trigger: CTTCTTGTTTTGCTGCCATCAGGTAATTTGTGCATT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATCCCCATTTCTTTTATaGTTCTCAGCAGTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKSPFLL*FSAVRA
Trigger: TGCCCTAACTGCTGAGAATCATAAAAGAAATGGGGA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATTACCATTTGACAAATaGCATCATCCATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLPFDK*HHPSLP
Trigger: AGGCAGGGATGGATGATGTCATTTGTCAAATGGTAA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTAGGGTTTTCTGGTCCTaGTTTGATGTGAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSRVFWS*FDVSQQ
Trigger: TTGTTGGCTCACATCAAATCAGGACCAGAAAACCCT...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AGGAATACTTCCAAAAATATAGGAATAGGGACACTATATAAAGCACGCTTGAGACCAGAAACTCCAACATaGCAGTGTGACTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: RNTSKNIGIGTLYKARLRPETPT*QCDSAL
Trigger: CAATGCTGAGTCACACTGTCATGTTGGAGTTTCTGG...TCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATTTTTGGAAGTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCACTTAAGAAGAGTCTaGATTAAGAGTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFHLRRV*IKSLSM
Trigger: CATGGAAAGACTCTTAATGCAGACTCTTCTTAAGTG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAACGAGAAAGTGTAAATaGGCTTTCCCTTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQITRKCK*AFPCPS
Trigger: AGAGGGGCAAGGGAAAGCGCATTTACACTTTCTCGT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACCTTTCCTCACCATGTaGAAGATGCAGGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKPFLTM*KMQGFK
Trigger: TTTAAATCCCTGCATCTTGCACATGGTGAGGAAAGG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCATCGAGCATTTATTTaGTTTTGGGGAAATCACCTA +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFHRAFI*FWGNHL
Trigger: TAGGTGATTTCCCCAAAAGCAAATAAATGCTCGATG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCTTCTACTTCAGAGATaGATGGTGGACCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRLLLQR*MVDPKS
Trigger: GGATTTTGGGTCCACCATGCATCTCTGAAGTAGAAG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATTATGCTGCTTTGCTTaGCCTGTGCACTATATGATG +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKLCCFA*PVHYMM
Trigger: CATCATATAGTGCACAGGGCAAGCAAAGCAGCATAA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTAAATCTGAAGCCACAAGTTTACCACCCAAGGTTGTTTCACATGTTCTTTAGTAGCTGTTCATATTCTTaGTGGGCATCTTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: LNLKPQVYHPRLFHMFFSSCSYS*WASLST
Trigger: AGTGCTCAAAGATGCCCAGCAAGAATATGAACAGCT...ACTAAAGAACATGTGAAACAACCTTGGGTGGTAAACTTGTGGCTTCAGATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp CTAGGTCACCCCTTTTCCATAAGGTTTGTCATGCAATTACAATTAACAATTGATTCCACCCTTCAATCTTaGCCTATTAGGCATGTCTGC +
Preference number: 4 (lower is better)
Translates to: LGHPFSIRFVMQLQLTIDSTLQS*PIRHVC
Trigger: GCAGACATGCCTAATAGGGCAAGATTGAAGGGTGGA...ATCAATTGTTAATTGTAATTGCATGACAAACCTTATGGAAAAGGGGTGACCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp TCCAAGAGGACATTCTTAAAGCCAGACCAAGTTCCCTTTTGCAATAGTAATCCAAAGGAATTCCTTTCTTaGTTACCATGGACGAAGATC +
Preference number: 4 (lower is better)
Translates to: SKRTFLKPDQVPFCNSNPKEFLS*LPWTKI
Trigger: GATCTTCGTCCATGGTAAGCAAGAAAGGAATTCCTT...TGGATTACTATTGCAAAAGGGAACTTGGTCTGGCTTTAAGAATGTCCTCTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp CTAGGTCACCCCTTTTCCATAAGGTTTGTCATGCAATTACAATTAACAATTGATTACAGCACTTCCTTTTaGGTTGAGTTTCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LGHPFSIRFVMQLQLTIDYSTSF*VEFPEA
Trigger: AGCCTCCGGAAACTCAACCCAAAAGGAAGTGCTGTA...ATCAATTGTTAATTGTAATTGCATGACAAACCTTATGGAAAAGGGGTGACCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR CCA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAAGCTACCGTTGGCATaGTTCAAATGCAACATTATT +
Preference number: 4 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFKLPLA*FKCNII
Trigger: AATAATGTTGCATTTGAACCATGCCAACGGTAGCTT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAGCCATCTCTGGGCAATaGAATACGAGAAAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKAISGQ*NTRKCK
Trigger: TTTACACTTTCTCGTATTCCATTGCCCAGAGATGGC...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGTACTTCAGAGATGCATaGTGGACCCAAAATCCATCG +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRYFRDA*WTQNPS
Trigger: CGATGGATTTTGGGTCCACCATGCATCTCTGAAGTA...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTGGTTTTCAAACCAATaGCACATTAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNWFSNQ*HINLMG
Trigger: GCCCATCAGATTAATGTGCCATTGGTTTGAAAACCA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGACCAAATGACACAATaGGCAAAGGCACCCTACAAT +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSDQMTQ*AKAPYN
Trigger: ATTGTAGGGTGCCTTTGCCCATTGTGTCATTTGGTC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATCATCTCCCTGTGCTTaGGTCAAGCTAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKSSPCA*VKLMKE
Trigger: TTCTTTCATTAGCTTGACCCAAGCACAGGGAGATGA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp GACGCAGAGGCTTTCAAACAGGATGGTTTTATTCCTTaGTTTTTAAACGATCTTTCTACAGTAGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: DAEAFKQDGFIP*FLNDLSTVVGQ
Trigger: CTGTCCCACTACTGTAGAAAGATCGTTTAAAAACAAAGGAATAAAACCATCCTGTTTGAAAGCCTCTGCGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCTACCCAAGTTCTTCTaGCATGCAGAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRLPKFF*HAEINL
Trigger: CAGATTGATTTCTGCATGTCAGAAGAACTTGGGTAG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACCTCTCTACACAAAATaGAAAAATGAGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIPLYTK*KNEPGV
Trigger: CACGCCTGGCTCATTTTTGCATTTTGTGTAGAGAGG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCCTTTTATGCTGCTTTaGTTGCCCTGTGCACTATAT +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRPFMLL*LPCALY
Trigger: ATATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTAATAAGCTACCGTTaGCATGGTTCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNLISYR*HGSNAT
Trigger: TGTTGCATTTGAACCATGCCAACGGTAGCTTATTAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGCTATATGCCATCTCTaGGCAATGGAATACGAGAAA +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRAICHL*AMEYEK
Trigger: TTTCTCGTATTCCATTGCCCAGAGATGGCATATAGC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTTACATTACTCTCTTaGGAGCAATGCAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNFTLLS*EQCKVE
Trigger: TTCCACTTTGCATTGCTCCCAAGAGAGTAATGTAAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATGGTTTTCAAACCAATaGCACATTAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKWFSNQ*HINLMG
Trigger: GCCCATCAGATTAATGTGCCATTGGTTTGAAAACCA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATAATCATCTCATGTCATaGTTTTCAAACCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNNHLMS*FSNQWH
Trigger: GTGCCATTGGTTTGAAAACCATGACATGAGATGATT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCACTCTCACAACTCTTaGGCAAAGTACAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRHSHNS*AKYSYF
Trigger: GAAATAGCTGTACTTTGCCCAAGAGTTGTGAGAGTG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAAGGTGGAGGCACTTTaGAAAAAGACTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRKVEAL*KKTHSS
Trigger: ACTACTATGAGTCTTTTTTCAAAGTGCCTCCACCTT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTTGCAGTACTCAACTTTaGAAGGCGGACTTAAGAATA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSCSTQL*KADLRI
Trigger: TATTCTTAAGTCCGCCTTTCAAAGTTGAGTACTGCA...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATGGGGAAATCACCTATaGGACTATGACACTGCATTA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIWGNHL*DYDTAL
Trigger: TAATGCAGTGTCATAGTCTCATAGGTGATTTCCCCA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ATGTCTGCATGGGTATCAGAGCATAAAGCATGGAGTGAAAACGAAGAATATTCTCCTATCTTCAAAATCTaGGTTTCCCATCAAACTACA +
Preference number: 4 (lower is better)
Translates to: MSAWVSEHKAWSENEEYSPIFKI*VSHQTT
Trigger: TGTAGTTTGATGGGAAACTCAGATTTTGAAGATAGG...AGAATATTCTTCGTTTTCACTCCATGCTTTATGCTCTGATACCCATGCAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp TCACATCGTCTCTTGCAAGTTTATGCTTATCTGAACCTTTCCTGTAAGGTTTTTAATTTCAGGCTTATGTaGATTCAGCCCCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: SHRLLQVYAYLNLSCKVFNFRLM*IQPLNN
Trigger: GTTATTCAGGGGCTGAATTCACATAAGCCTGAAATT...AAAAACCTTACAGGAAAGGTTCAGATAAGCATAAACTTGCAAGAGACGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATACCTTTCCTCACCATGTaGAAGATGCAGGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIPFLTM*KMQGFK
Trigger: TTTAAATCCCTGCATCTTGCACATGGTGAGGAAAGG...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAATTCTCAGGTCCCATTaGATACTTACAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKILRSH*ILTDSE
Trigger: TTCTGAATCTGTAAGTATGCAATGGGACCTGAGAAT...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGATGTCTCAGAGTCCTaGTCCATAAAAAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSDVSES*SIKRRY
Trigger: GTATCTTCTTTTTATGGAGCAGGACTCTGAGACATC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGGGTATTCACTAAGGTaGAACTTTCTCACCAAACAA +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSGYSLR*NFLTKQ
Trigger: TTGTTTGGTGAGAAAGTTGCACCTTAGTGAATACCC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp GCAATGTGCCTTAAGAAAAACGCTAGAATGCTAGATCTTAAGCCCATTATAACCTTCACAGAAGCAATGTaGCTTAAGAAAAACGCTAGA +
Preference number: 4 (lower is better)
Translates to: AMCLKKNARMLDLKPIITFTEAM*LKKNAR
Trigger: TCTAGCGTTTTTCTTAAGGCACATTGCTTCTGTGAA...GGTTATAATGGGCTTAAGATCTAGCATTCTAGCGTTTTTCTTAAGGCACATTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAAATACACTCCCCTTGTaGCATAAAGTCCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQINTLPL*HKVQLE
Trigger: TTCAAGCTGGACTTTATGCCACAAGGGGAGTGTATT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATGAAATCCTCAAGTTATaGAGAAAAAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LALKICHFYFRDAWWTQNEILKL*RKRSIS
Trigger: AGAAATGCTCCTTTTTCTCCATAACTTGAGGATTTC...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp AAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTTCAGAGCATAAAGCATaGAGTGAAAACGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: KQQQHKVSPHKGKPEKNPSEHKA*SENEEY
Trigger: ATATTCTTCGTTTTCACTCCATGCTTTATGCTCTGA...AGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR TCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCCTGGAAAGAAAACATaGTTGGGCCATGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRPGKKT*LGHVIK
Trigger: TTTAATTACATGGCCCAATCATGTTTTCTTTCCAGG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATGCAGTACTCAACTTTaGAAGGCGGACTTAAGAATA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQICSTQL*KADLRI
Trigger: TATTCTTAAGTCCGCCTTTCAAAGTTGAGTACTGCA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAACACAACTGTATGACCTaGTTTATTTCACTTACTCAT +
Preference number: 4 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKHNCMT*FISLTH
Trigger: ATGAGTAAGTGAAATAAAGCAGGTCATACAGTTGTG...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGCAAGGCAGTACTATTTaGTCACAAAATAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: IKSSLKNIALTIKSISGRQGSTI*SQNRSV
Trigger: CACAGATCTATTTTGTGAGCAAATAGTACTGCCTTG...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGATGTCTCAGAGTCCTaGTCCATAAAAAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIDVSES*SIKRRY
Trigger: GTATCTTCTTTTTATGGAGCAGGACTCTGAGACATC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR TCA 90 bp TCTACTAGGTCACCCCTTTTCCATAAGGTTTGTCATGCAATTACAATTAACAATAACAGTTGCTATGCATaGGAAGGTGTAAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: STRSPLFHKVCHAITINNNSCYA*EGVKSS
Trigger: AGAAGATTTTACACCTTCTCATGCATAGCAACTGTT...ATTGTTAATTGTAATTGCATGACAAACCTTATGGAAAAGGGGTGACCTAGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR GCA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGAGCTTCCTGAACACTaGTTCACTAAGAATTATTAT +
Preference number: 4 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSELPEH*FTKNYY
Trigger: ATAATAATTCTTAGTGAAGCAGTGTTCAGGAAGCTC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAATTTCCAACTCTGGCTaGATATACCAAGCAATTATG +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIISNSG*IYQAIM
Trigger: CATAATTGCTTGGTATATGCAGCCAGAGTTGGAAAT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATATATTATGGACCTACTTaGTATTTAAGGGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIYYGPT*YLREGS
Trigger: TGACCCTTCCCTTAAATACCAAGTAGGTCCATAATA...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAAAGCTACCGTTGGCATaGTTCAAATGCAACATTATT +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIKLPLA*FKCNII
Trigger: AATAATGTTGCATTTGAACCATGCCAACGGTAGCTT...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
3UTR CAA 72 bp AGAACAGTTATGATCCTGTGCTCTATTGTAATAGGGTaGAGAAAATGCTATACTTACCTTAGCCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RTVMILCSIVIG*RKCYTYLSLEN
Trigger: ATTTTCAAGGCTAAGGTAAGTATAGCATTTTCTCAACCCTATTACAATAGAGCACAGGATCATAACTGTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR GCA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGAGCTTCCTGAACACTaGTTCACTAAGAATTATTAT +
Preference number: 4 (lower is better)
Translates to: TRTAFETSMITKYAILQIELPEH*FTKNYY
Trigger: ATAATAATTCTTAGTGAAGCAGTGTTCAGGAAGCTC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAGGCGGGAGGATCGCTaGAGCTGGGGAGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLRREDR*SWGGQG
Trigger: TCCTTGACCTCCCCAGCTCAAGCGATCCTCCCGCCT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGAAGAAGGGAGCCAGGTaGCAGAGCTGGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRKKGAR*QSWLQA
Trigger: GGCTTGGAGCCAGCTCTGCAACCTGGCTCCCTTCTT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGAAGAAGGGAGCCAGGTaGCAGAGCTGGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLKKGAR*QSWLQA
Trigger: GGCTTGGAGCCAGCTCTGCAACCTGGCTCCCTTCTT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGGCACTTCCTTTTGGGTaGAGTTTCCGGAGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: PHPRLTNTPLQHRQPKQQALPFG*SFRRLE
Trigger: CTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTGC...CTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCAGGAGGTCAGGAGTTaGAGATCTGTCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLQEVRS*RSVWPT
Trigger: TGTTGGCCAGACAGATCTCAAACTCCTGACCTCCTG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGCACCCTGTAGGCTATaGAGACCAAAGTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRAPCRL*RPKSLP
Trigger: AGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTGC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGCTTCCTGGTGAAATGTaGTCCCTTGCCCCACAGTTA +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLLPGEM*SLAPQL
Trigger: TAACTGTGGGGCAAGGGACAACATTTCACCAGGAAG...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATTCCCTTGCCCCTCTTaGGCCCACCATAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQFPCPS*AHHKQV
Trigger: GACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGTCATCTCCCTGTGCTaGGGTCAAGCTAATGAAAGA +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRVISLC*GQANER
Trigger: TCTTTCATTAGCTTGACCCAAGCACAGGGAGATGAC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGATGAATAGCACTGACTaGGGATCGGCTATATGCCAT +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRMNSTD*GSAICH
Trigger: ATGGCATATAGCCGATCCCAAGTCAGTGCTATTCAT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGATGAGTACCTTCTACTaGCCAGGCACTATGCTAAGA +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRMSTFY*PGTMLR
Trigger: TCTTAGCATAGTGCCTGGCAAGTAGAAGGTACTCAT...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS GCA 90 bp CTGATGATGACTTCCAAGAAAGCCTGTCAGCGGCACAGCAGCTCATaGCTATATCCCAGCACTTTCAGAGGCCAACAGGAGCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: LMMTSKKACQRHSSS*LYPSTFRGQQEQIA
Trigger: AGCTATTTGCTCCTGTTGGCCTCTGAAAGTGCTGGGATATAGGCATGAGCTGCTGTGCCGCTGACAGGCTTTCTTGGAAGTCATCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS-3UTR CAA 90 bp GCAGGTTTCACGCCCAGCTCTGCTACCATACAGCTGTGTGGTGACAGGCAAAGGGGCATAAAGTCCAGCTaGAAGAACATCGCTTTAACT +
Preference number: 5 (lower is better)
Translates to: AGFTPSSATIQLCGDRQRGIKSS*KNIALT
Trigger: AGTTAAAGCGATGTTCTTCAAGCTGGACTTTATGCC...CCTTTGCCTGTCACCACACAGCTGTATGGTAGCAGAGCTGGGCGTGAAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAGCACCCTGTAGGCTATaGAGACCAAAGTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQAPCRL*RPKSLP
Trigger: AGGTAAGGACTTTGGTCTCAATAGCCTACAGGGTGC...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGACCAACAATGCCAAGTaGTTTCGCCTCAGTTTTACC +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLTNNAK*FRLSFT
Trigger: GGTAAAACTGAGGCGAAACAACTTGGCATTGTTGGT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp GTATCCCTGACCGTTTGCAGAGAAGATGAAGGCAGAGCCCCAGTCATCTCCCTGATGAGTACCTTCTACTaGCCAGGCACTATGCTAAGA +
Preference number: 5 (lower is better)
Translates to: VSLTVCREDEGRAPVISLMSTFY*PGTMLR
Trigger: TCTTAGCATAGTGCCTGGCAAGTAGAAGGTACTCAT...CAGGGAGATGACTGGGGCTCTGCCTTCATCTTCTCTGCAAACGGTCAGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS TCA 90 bp TGCCTATATCCCAGCACTTTCAGAGGCCAACAGGAGCAAATAGCTTaGGTTCAGGCATTCCAGATCAGCCTGGACAACATGAGGAAACCC +
Preference number: 5 (lower is better)
Translates to: CLYPSTFRGQQEQIA*VQAFQISLDNMRKP
Trigger: GGGTTTCCTCATGTTGTCCAGGCTGATCTGGAATGCCTGAACTCAAGCTATTTGCTCCTGTTGGCCTCTGAAAGTGCTGGGATATAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS-3UTR CAA 90 bp CCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCTTGTCTACTGGAGTTTaGCCTCCCAGCACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: PPLVRILSTGVLPPSTSCLSTGV*PPSTSC
Trigger: GCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAA...GCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR CAA 90 bp TACTTCACCAAATTGAGACCACCACTCGTTAGAATCTTGTCTACTGGAGTTTTGGCCTCCCAGCACTTCTaGCAAACCCTGTGTCACCCC +
Preference number: 5 (lower is better)
Translates to: YFTKLRPPLVRILSTGVLASQHF*QTLCHP
Trigger: GGGGTGACACAGGGTTTGCAAGAAGTGCTGGGAGGC...CAAAACTCCAGTAGACAAGATTCTAACGAGTGGTGGTCTCAATTTGGTGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTCTGCCAAAGGGCACGTaGTTAGGAGTAATAATGCAA +
Preference number: 5 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLPKGT*LGVIMQ
Trigger: TTGCATTATTACTCCTAACAACGTGCCCTTTGGCAG...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTTATTTATGGGGGCCTaGAGGCTACCTTTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSLFMGA*RLPFFL
Trigger: TAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAAACCAACAATGCCAAGTaGTTTCGCCTCAGTTTTACC +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQTNNAK*FRLSFT
Trigger: GGTAAAACTGAGGCGAAACAACTTGGCATTGTTGGT...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAAACCAGAAAAGAATCCTCGCACTTCCTTTTGGGTaGAGTTTCCGGAGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: SNSNTKFHRTKENQKRILALPFG*SFRRLE
Trigger: CTCGAGCCTCCGGAAACTCAACCCAAAAGGAAGTGC...GAGGATTCTTTTCTGGTTTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315554.13
ENST00000667384.1
CDS-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTTACACGGATAATTCGTaGACACAACTGTATGACCTG +
Preference number: 5 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSYTDNS*TQLYDL
Trigger: CAGGTCATACAGTTGTGTCAACGAATTATCCGTGTA...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AGCTGGCTCCAAGCCTCCCTCAGACCTTGGGTATTCACTAAGGTGCAACTTTCTAAAAAGGATTACAAATaGTTCCCCACCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SWLQASLRPWVFTKVQLSKKDYK*FPTQFS
Trigger: GGAGAACTGGGTGGGGAACAATTTGTAATCCTTTTT...AGAAAGTTGCACCTTAGTGAATACCCAAGGTCTGAGGGAGGCTTGGAGCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACCATCGAGCATTTATTaGCTTTTGGGGAAATCACCT +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQPSSIY*LLGKSP
Trigger: AGGTGATTTCCCCAAAAGCAAATAAATGCTCGATGG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTAGGCGGGAGGATCGCTaGAGCTGGGGAGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSRREDR*SWGGQG
Trigger: TCCTTGACCTCCCCAGCTCAAGCGATCCTCCCGCCT...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp TACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAATCTTGCTGGGCATCTTaGAGCACTGCTGATCACTGT +
Preference number: 5 (lower is better)
Translates to: YSTDSQSNSNTKFHRTKESCWAS*STADHC
Trigger: ACAGTGATCAGCAGTGCTCAAAGATGCCCAGCAAGA...TTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp TCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGCACCTATCCTGGTTGAATaGCCCAAGAAACAGTATAGT +
Preference number: 5 (lower is better)
Translates to: SSPPQTDKYSTTAQTAKAPILVE*PKKQYS
Trigger: ACTATACTGTTTCTTGGGCAATTCAACCAGGATAGG...TGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp TATCTTCCCCACCCCAGACTGACAAATACTCCACTACAGCACAGACAGCCAAAGACACATGACTTTCCCTaGTCTCCCCCAATATACACA +
Preference number: 5 (lower is better)
Translates to: YLPHPRLTNTPLQHRQPKTHDFP*SPPIYT
Trigger: TGTGTATATTGGGGGAGACAAGGGAAAGTCATGTGT...CTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAGTCTGGGGTGGGGAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp CTGACAAATACTCCACTACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTCAGTGTGACTCAGCATaGGTGGTACTTAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: LTNTPLQHRQPKQQQHKVQCDSA*VVLRTQ
Trigger: CTGGGTCCTAAGTACCACCAATGCTGAGTCACACTG...AACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGTAGTGGAGTATTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAATTATTATGGACCTACTaGGTATTTAAGGGAAGGGTC +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLLWTY*VFKGRV
Trigger: GACCCTTCCCTTAAATACCAAGTAGGTCCATAATAA...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGATTCTCAGGTCCCATaGCATACTTACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVDSQVP*HTYRFR
Trigger: TCTGAATCTGTAAGTATGCAATGGGACCTGAGAATC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp TTAGAATCTTGTCTACTGGAGTTTTGCCTCCCAGCACTTCTTGCAAACCCTGTGGCATACTTCACCAAATaGAGACCACCACTCGTTAGA +
Preference number: 5 (lower is better)
Translates to: LESCLLEFCLPALLANPVAYFTK*RPPLVR
Trigger: TCTAACGAGTGGTGGTCTCAATTTGGTGAAGTATGC...CACAGGGTTTGCAAGAAGTGCTGGGAGGCAAAACTCCAGTAGACAAGATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498236.1
CDS-3UTR CAA 90 bp AAATGCGCTTTCCCTTGCCCCTCTTTGGCCCACCATAAGCAAGTCCACACTCAACTTTTAGAAATTAGATaGATTCTCAGGTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: KCAFPCPSLAHHKQVHTQLLEIR*ILRSHC
Trigger: GCAATGGGACCTGAGAATCAATCTAATTTCTAAAAG...TTGAGTGTGGACTTGCTTATGGTGGGCCAAAGAGGGGCAAGGGAAAGCGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTTATGAACTGTCCAAGTaGTGCACTGCACAAGGGTAC +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFYELSK*CTAQGY
Trigger: GTACCCTTGTGCAGTGCACAACTTGGACAGTTCATA...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCATACTTACCTTAGCCTaGAAAATCTGTCACTTCTAC +
Preference number: 5 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVILTLA*KICHFY
Trigger: GTAGAAGTGACAGATTTTCAAGGCTAAGGTAAGTAT...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CACCAATTTATTTATGGGGGCCTTGAGGCTACCTTTCTTCCTACTGCACCCGTCGAGCATTTAAGTTACTaGCCTGAAGACATAGATCAA +
Preference number: 5 (lower is better)
Translates to: HQFIYGGLEATFLPTAPVEHLSY*PEDIDQ
Trigger: TTGATCTATGTCTTCAGGCAAGTAACTTAAATGCTC...GACGGGTGCAGTAGGAAGAAAGGTAGCCTCAAGGCCCCCATAAATAAATTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CTTGCCCTATTAGGCATGTCTGCTCAGTGTTCAAACTTCAAAGCACCAGTACCAAATTCCCTATCCTGGTaGAATTGCCCAAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: LALLGMSAQCSNFKAPVPNSLSW*NCPRNS
Trigger: ACTGTTTCTTGGGCAATTCAACCAGGATAGGGAATT...TGGTACTGGTGCTTTGAAGTTTGAACACTGAGCAGACATGCCTAATAGGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp ACAGCACAGACAGCCAAAGCAACAGCAACACAAAGTTTCACCGCACAAAGGAAACATTCACATCGTCTCTaGCAAGTTTATGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: TAQTAKATATQSFTAQRKHSHRL*QVYAYL
Trigger: CAGATAAGCATAAACTTGCAAGAGACGATGTGAATG...TTTCCTTTGTGCGGTGAAACTTTGTGTTGCTGTTGCTTTGGCTGTCTGTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGGCATAAAGTCCAGCTaGAAGAACATCGCTTTAACT +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFGIKSS*KNIALT
Trigger: AGTTAAAGCGATGTTCTTCAAGCTGGACTTTATGCC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAATATGAACTGTCCAAGTaGTGCACTGCACAAGGGTAC +
Preference number: 5 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKYELSK*CTAQGY
Trigger: GTACCCTTGTGCAGTGCACAACTTGGACAGTTCATA...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTAAAAAGGATTACAAATaGTTCCCCACCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFKKDYK*FPTQFS
Trigger: GGAGAACTGGGTGGGGAACAATTTGTAATCCTTTTT...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCCATCGAGCATTTATTaGCTTTTGGGGAAATCACCT +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFPSSIY*LLGKSP
Trigger: AGGTGATTTCCCCAAAAGCAAATAAATGCTCGATGG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGATTCTCAGGTCCCATaGCATACTTACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFDSQVP*HTYRFR
Trigger: TCTGAATCTGTAAGTATGCAATGGGACCTGAGAATC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp CTCTCTTGGGAGCAATGCAAAGTGGAAAGAGATGACATAGTTATTCAAGAGAAAGCCTTTTATGCTGCTTaGCTTGCCCTGTGCACTATA +
Preference number: 5 (lower is better)
Translates to: LSWEQCKVERDDIVIQEKAFYAA*LALCTI
Trigger: TATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGGC...TTTCTCTTGAATAACTATGTCATCTCTTTCCACTTTGCATTGCTCCCAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTTTTAATAAGCTACCGTaGGCATGGTTCAAATGCAAC +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFFNKLP*AWFKCN
Trigger: GTTGCATTTGAACCATGCCAACGGTAGCTTATTAAA...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATTTTATGCTGCTTTGCTaGCCCTGTGCACTATATGAT +
Preference number: 5 (lower is better)
Translates to: LALKICHFYFRDAWWTQNFMLLC*PCALYD
Trigger: ATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAA...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGCCTTTTATGCTGCTTaGCTTGCCCTGTGCACTATA +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSAFYAA*LALCTI
Trigger: TATAGTGCACAGGGCAAGCAAAGCAGCATAAAAGGC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTGTCATCTCCCTGTGCTaGGGTCAAGCTAATGAAAGA +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSVISLC*GQANER
Trigger: TCTTTCATTAGCTTGACCCAAGCACAGGGAGATGAC...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ACATCAGTTACAAGTCCCATTCCAAATACCCTAACATTGCTCCCTATCTTCAAAGGCCTCGAAGTTATTTaGAGGGATATCCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: TSVTSPIPNTLTLLPIFKGLEVI*RDIPVK
Trigger: CTTAACTGGGATATCCCTCAAAATAACTTCGAGGCC...TTTGAAGATAGGGAGCAATGTTAGGGTATTTGGAATGGGACTTGTAACTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp TCCAAGAGGACATTCTTAAAGCCAGACCAAGTTCCCTTTTGCAATAGTAATCCAGAAGGAATTCCTTTCTaGCTTACCATGGACGAAGAT +
Preference number: 5 (lower is better)
Translates to: SKRTFLKPDQVPFCNSNPEGIPF*LTMDED
Trigger: ATCTTCGTCCATGGTAAGCAAGAAAGGAATTCCTTC...TGGATTACTATTGCAAAAGGGAACTTGGTCTGGCTTTAAGAATGTCCTCTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGATGAATAGCACTGACTaGGGATCGGCTATATGCCAT +
Preference number: 5 (lower is better)
Translates to: IKSSLKNIALTIKSISGRMNSTD*GSAICH
Trigger: ATGGCATATAGCCGATCCCAAGTCAGTGCTATTCAT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTCTGCCAAAGGGCACGTaGTTAGGAGTAATAATGCAA +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSLPKGT*LGVIMQ
Trigger: TTGCATTATTACTCCTAACAACGTGCCCTTTGGCAG...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTCTTTTAGAAATTAGATaGATTCTCAGGTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFLLEIR*ILRSHC
Trigger: GCAATGGGACCTGAGAATCAATCTAATTTCTAAAAG...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATCCTGACCCCACTAATCAGCAATGTGCTTTTAAACCTTCCACTGTACTCCTTTGAGCAAAAACAGGACTaGATTTATCACGCTATATGT +
Preference number: 5 (lower is better)
Translates to: ILTPLISNVLLNLPLYSFEQKQD*IYHAIC
Trigger: ACATATAGCGTGATAAATCAAGTCCTGTTTTTGCTC...AAAGGAGTACAGTGGAAGGTTTAAAAGCACATTGCTGATTAGTGGGGTCAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp TTAGCCTTGAAAATCTGTCACTTCTACTTCAGAGATGCATGGTGGACCCAAAATAACTTAAAAATCACATaGTTCAAGCTGCACTCCAGT +
Preference number: 5 (lower is better)
Translates to: LALKICHFYFRDAWWTQNNLKIT*FKLHSS
Trigger: ACTGGAGTGCAGCTTGAACAATGTGATTTTTAAGTT...ATTTTGGGTCCACCATGCATCTCTGAAGTAGAAGTGACAGATTTTCAAGGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTTACACGGATAATTCGTaGACACAACTGTATGACCTG +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSYTDNS*TQLYDL
Trigger: CAGGTCATACAGTTGTGTCAACGAATTATCCGTGTA...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGGTGAAATGTTGTCCCTaGCCCCACAGTTATATAACA +
Preference number: 5 (lower is better)
Translates to: IKSSLKNIALTIKSISGRVKCCP*PHSYIT
Trigger: TGTTATATAACTGTGGGGCAAGGGACAACATTTCAC...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTTTTATGCTGCTTTGCTaGCCCTGTGCACTATATGAT +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSFMLLC*PCALYD
Trigger: ATCATATAGTGCACAGGGCAAGCAAAGCAGCATAAA...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ACATCAGTTACAAGTCCCATTCCAAATACCCTAACATTGCTCCCTATCTTCAAACCAAATACCCTAACATaGCTCCCTATCTTCAAAATC +
Preference number: 5 (lower is better)
Translates to: TSVTSPIPNTLTLLPIFKPNTLT*LPIFKI
Trigger: GATTTTGAAGATAGGGAGCAATGTTAGGGTATTTGG...TTTGAAGATAGGGAGCAATGTTAGGGTATTTGGAATGGGACTTGTAACTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGTGAAATGTTGTCCCTaGCCCCACAGTTATATAACA +
Preference number: 5 (lower is better)
Translates to: TRTAFETSMITKYAILQIVKCCP*PHSYIT
Trigger: TGTTATATAACTGTGGGGCAAGGGACAACATTTCAC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTTTTAATAAGCTACCGTaGGCATGGTTCAAATGCAAC +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSFNKLP*AWFKCN
Trigger: GTTGCATTTGAACCATGCCAACGGTAGCTTATTAAA...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ATAAAGTCCAGCTTGAAGAACATCGCTTTAACTATAAAATCTATTTCTGGCCGGAACTTAAAAATCACATaGTTCAAGCTGCACTCCAGT +
Preference number: 5 (lower is better)
Translates to: IKSSLKNIALTIKSISGRNLKIT*FKLHSS
Trigger: ACTGGAGTGCAGCTTGAACAATGTGATTTTTAAGTT...CCGGCCAGAAATAGATTTTATAGTTAAAGCGATGTTCTTCAAGCTGGACTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AAGAAAATGTATCCCATATTCAGATTCGCAGCACAGAACCTGTATTCTGATAGTATACTTACCTTAGCCTaGAAAATCTGTCACTTCTAC +
Preference number: 5 (lower is better)
Translates to: KKMYPIFRFAAQNLYSDSILTLA*KICHFY
Trigger: GTAGAAGTGACAGATTTTCAAGGCTAAGGTAAGTAT...ACTATCAGAATACAGGTTCTGTGCTGCGAATCTGAATATGGGATACATTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AGGAATACTTCCAAAAATATAGGAATAGGGACACTATATAAAGCACGCTTGAGACCATGGCTGCCTTCTTaGACATTAAAGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: RNTSKNIGIGTLYKARLRPWLPS*TLKSQL
Trigger: TAATTGAGACTTTAATGTCAAAGAAGGCAGCCATGG...TCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATTTTTGGAAGTATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS-3UTR CAA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGAGCATTTAAGTTACTaGCCTGAAGACATAGATCAA +
Preference number: 5 (lower is better)
Translates to: TRTAFETSMITKYAILQIEHLSY*PEDIDQ
Trigger: TTGATCTATGTCTTCAGGCAAGTAACTTAAATGCTC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp ACCCGAACTGCATTTGAGACCTCAATGATAACTAAGTATGCAATTTTACAGATAGAGCAAAAACAGGACTaGATTTATCACGCTATATGT +
Preference number: 5 (lower is better)
Translates to: TRTAFETSMITKYAILQIEQKQD*IYHAIC
Trigger: ACATATAGCGTGATAAATCAAGTCCTGTTTTTGCTC...TATCTGTAAAATTGCATACTTAGTTATCATTGAGGTCTCAAATGCAGTTCGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648594.1
ENST00000656825.1
CDS-3UTR CAA 90 bp AGGAATACTTCCAAAAATATAGGAATAGGGACACTATATAAAGCACGCTTGAGACACATGTTCTTTAGTTaGATCAGTTTGATCCCAAGT +
Preference number: 5 (lower is better)
Translates to: RNTSKNIGIGTLYKARLRHMFFS*ISLIPS
Trigger: ACTTGGGATCAAACTGATCAAACTAAAGAACATGTG...TCTCAAGCGTGCTTTATATAGTGTCCCTATTCCTATATTTTTGGAAGTATTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS TCA 72 bp CGGGGTCTCCTCGGCTGCCGGACAGGGGCACGCACCTaGCGTCAGCGCGCAGGAGACGCACAGTTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: RGLLGCRTGART*RQRAGDAQLGA
Trigger: GGCACCCAACTGTGCGTCTCCTGCGCGCTGACGTCAGGTGCGTGCCCCTGTCCGGCAGCCGAGGAGACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400259.5
CDS GCA 72 bp ACTTCCAAGAAAGCCTGTCAGCGGCACAGCAGCTCATaGCTATATCCCAGCACTTTCAGAGGCCAACAGGAG +
Preference number: 6 (lower is better)
Translates to: TSKKACQRHSSS*LYPSTFRGQQE
Trigger: CTCCTGTTGGCCTCTGAAAGTGCTGGGATATAGGCATGAGCTGCTGTGCCGCTGACAGGCTTTCTTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS TCA 72 bp CCCAGCACTTTCAGAGGCCAACAGGAGCAAATAGCTTaGGTTCAGGCATTCCAGATCAGCCTGGACAACATG +
Preference number: 6 (lower is better)
Translates to: PSTFRGQQEQIA*VQAFQISLDNM
Trigger: CATGTTGTCCAGGCTGATCTGGAATGCCTGAACTCAAGCTATTTGCTCCTGTTGGCCTCTGAAAGTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CCA 72 bp CAAGCTTTCAAAACATCATCTGTGAATACGACGTGTTaGGAAGCAGGCAGGATAAGCCACTGGGTGACCGAC +
Preference number: 6 (lower is better)
Translates to: QAFKTSSVNTTC*EAGRISHWVTD
Trigger: GTCGGTCACCCAGTGGCTTATCCTGCCTGCTTCCCAACACGTCGTATTCACAGATGATGTTTTGAAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CAA 72 bp TCCCAGCACTTTCAGAGGCCAACAGGAGCAAATAGCTaGAGTTCAGGCATTCCAGATCAGCCTGGACAACAT +
Preference number: 6 (lower is better)
Translates to: SQHFQRPTGANS*SSGIPDQPGQH
Trigger: ATGTTGTCCAGGCTGATCTGGAATGCCTGAACTCAAGCTATTTGCTCCTGTTGGCCTCTGAAAGTGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CAA 90 bp ATGCCTATATCCCAGCACTTTCAGAGGCCAACAGGAGCAAATAGCTaGAGTTCAGGCATTCCAGATCAGCCTGGACAACATGAGGAAACC +
Preference number: 6 (lower is better)
Translates to: MPISQHFQRPTGANS*SSGIPDQPGQHEET
Trigger: GGTTTCCTCATGTTGTCCAGGCTGATCTGGAATGCCTGAACTCAAGCTATTTGCTCCTGTTGGCCTCTGAAAGTGCTGGGATATAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CAA 72 bp ACAAGCTTTCAAAACATCATCTGTGAATACGACGTGTaGGGAAGCAGGCAGGATAAGCCACTGGGTGACCGA +
Preference number: 6 (lower is better)
Translates to: TSFQNIICEYDV*GSRQDKPLGDR
Trigger: TCGGTCACCCAGTGGCTTATCCTGCCTGCTTCCCAACACGTCGTATTCACAGATGATGTTTTGAAAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CAA 90 bp ACACAAGTAACAAGCTTTCAAAACATCATCTGTGAATACGACGTGTaGGGAAGCAGGCAGGATAAGCCACTGGGTGACCGACTAAGGCTG +
Preference number: 6 (lower is better)
Translates to: TQVTSFQNIICEYDV*GSRQDKPLGDRLRL
Trigger: CAGCCTTAGTCGGTCACCCAGTGGCTTATCCTGCCTGCTTCCCAACACGTCGTATTCACAGATGATGTTTTGAAAGCTTGTTACTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS CCA 72 bp GACCTCTATTTAAAGTTAATGCCACGCAAGGGGCCGTaGACGGTGTTGTCTTACACTTTATTCCCTGACACA +
Preference number: 6 (lower is better)
Translates to: DLYLKLMPRKGP*TVLSYTLFPDT
Trigger: TGTGTCAGGGAATAAAGTGTAAGACAACACCGTCCACGGCCCCTTGCGTGGCATTAACTTTAAATAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS TCA 72 bp TCCCAGCACTTCTTGCAAACCCTGTGTCACCCCTTCTaGCTTTCCACTGATTTTTCAGAGTCGGTACATATT +
Preference number: 6 (lower is better)
Translates to: SQHFLQTLCHPF*LSTDFSESVHI
Trigger: AATATGTACCGACTCTGAAAAATCAGTGGAAAGTCAGAAGGGGTGACACAGGGTTTGCAAGAAGTGCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652582.1
CDS TCA 72 bp CTCTTTTCAACACAACTTCACCACAAAAAGTGCACTTaGATCAACCTAGGGAGATTCCCAGCATGCAGTAAG +
Preference number: 6 (lower is better)
Translates to: LFSTQLHHKKCT*INLGRFPACSK
Trigger: CTTACTGCATGCTGGGAATCTCCCTAGGTTGATTCAAGTGCACTTTTTGTGGTGAAGTTGTGTTGAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS TCA 72 bp ACTAAGGCTGCAAAATGCTGTTTGAATTTAAGTCCCTaGCTTGTAGGAGTTAAGTCTCACTCCTTATACCGC +
Preference number: 6 (lower is better)
Translates to: TKAAKCCLNLSP*LVGVKSHSLYR
Trigger: GCGGTATAAGGAGTGAGACTTAACTCCTACAAGTCAGGGACTTAAATTCAAACAGCATTTTGCAGCCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1
CDS GCA 72 bp ATAAATGACTCGACCATAAATACACATGGGGTTTCATaGCATTCTTACCTGTGTAAGTGCAGAACACTCCAC +
Preference number: 6 (lower is better)
Translates to: INDSTINTHGVS*HSYLCKCRTLH
Trigger: GTGGAGTGTTCTGCACTTACACAGGTAAGAATGGCATGAAACCCCATGTGTATTTATGGTCGAGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667384.1
CDS CAA 72 bp GTCATAAAGGAGAATAAACAGTCTGGGAAAGTCATTTaGGACCGAAAAGTGTTCCCACAAATAAACCCACCT +
Preference number: 6 (lower is better)
Translates to: VIKENKQSGKVI*DRKVFPQINPP
Trigger: AGGTGGGTTTATTTGTGGGAACACTTTTCGGTCCAAAATGACTTTCCCAGACTGTTTATTCTCCTTTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662562.1