Pregenerated sensors for CDC37L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106993Ensembl transcript IDs: ENST00000381854.4, ENST00000381858.5, ENST00000479095.1
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAACAAGATACAAATGAGGCCAAGGTCACAGGTCTGGCCACCCTaGGTCCCTTCGCACTATTTGGTTTCTCAAGTTGAGACACGTATT | + |
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Preference number: 1 (lower is better) Translates to: ENKIQMRPRSQVWPP*VPSHYLVSQVETRI Trigger: AATACGTGTCTCAACTTGAGAAACCAAATAGTGCGAAGGGACTCAGGGTGGCCAGACCTGTGACCTTGGCCTCATTTGTATCTTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR CCA 90 bp | TATCCTGGCATAACTGAAATGACTTACAGAGGAAGTAGTAAAGCTTaGAAGTATTCTATGGTAACTGAGCTGAAAAAGGGGAAATGCCAA | + |
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Preference number: 1 (lower is better) Translates to: YPGITEMTYRGSSKA*KYSMVTELKKGKCQ Trigger: TTGGCATTTCCCCTTTTTCAGCTCAGTTACCATAGAATACTTCCAAGCTTTACTACTTCCTCTGTAAGTCATTTCAGTTATGCCAGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR TCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGAGTCAAGGATTTAACTaGTGGTGCCGAAAGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSQGFN*WCRKSS Trigger: ACTTGACTTTCGGCACCATCAGTTAAATCCTTGACT...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR GCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTCCAGTTTGACTTCCTaGAACATATGGTACCACTCT | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSSLTS*NIWYHS Trigger: AGAGTGGTACCATATGTTGCAGGAAGTCAAACTGGA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAACTTCCTGCAACATATaGTACCACTCTTCTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IGHVHIHIKRDCSRCLPETSCNI*YHSSLQ Trigger: CTGAAGAGAAGAGTGGTACCATATGTTGCAGGAAGT...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTCAGAAATAGGTAATTaGCAGCTCAAGGCAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSEIGN*QLKAVS Trigger: GCTAACTGCCTTGAGCTGCCAATTACCTATTTCTGA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTCCCTTCGCACTATTTaGTTTCTCAAGTTGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSLRTI*FLKLRH Trigger: GTGTCTCAACTTGAGAAACCAAATAGTGCGAAGGGA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR TCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTTAAAACTTACTCCCTaGGAGATCCCAGACTATGTT | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKLKLTP*EIPDYV Trigger: AACATAGTCTGGGATCTCTCAGGGAGTAAGTTTTAA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR TCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGGTATTCTATGGTAACTaGGCTGAAAAAGGGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKVFYGN*AEKGEM Trigger: CATTTCCCCTTTTTCAGCTCAGTTACCATAGAATAC...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACGAACAAAAATAAAGTaGAGCACCCATAAAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IGHVHIHIKRDCSRCLPERTKIK*STHKSV Trigger: GACACTTTTATGGGTGCTGCACTTTATTTTTGTTCG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR GCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTCAAAACAATTTGAATaGTTACAGGCAAATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSKQFE*LQANPG Trigger: CCCAGGATTTGCCTGTAAGCATTCAAATTGTTTTGA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR TCA 72 bp | AAGTGTCTGATCACCTCAGCGAAAACAAGATACAAATaGGGCCAAGGTCACAGGTCTGGCCACCCTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: KCLITSAKTRYK*GQGHRSGHPES Trigger: GGACTCAGGGTGGCCAGACCTGTGACCTTGGCCTCATTTGTATCTTGTTTTCGCTGAGGTGATCAGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR TCA 72 bp | ATACAAATGAGGCCAAGGTCACAGGTCTGGCCACCCTaGGTCCCTTCGCACTATTTGGTTTCTCAAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: IQMRPRSQVWPP*VPSHYLVSQVE Trigger: CTCAACTTGAGAAACCAAATAGTGCGAAGGGACTCAGGGTGGCCAGACCTGTGACCTTGGCCTCATTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR-3UTR CAA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACACAAAAAGTCCAGTTaGACTTCCTGCAACATATGG | + |
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Preference number: 3 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEHKKSS*TSCNIW Trigger: CCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| 3UTR GCA 72 bp | AAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTaGAACATATGGTACCACTCTTCTCTTCAGAACAAA | + |
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Preference number: 3 (lower is better) Translates to: KFSSHKKSSLTS*NIWYHSSLQNK Trigger: TTTGTTCTGAAGAGAAGAGTGGTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATGGCCGCGACGCCGCTaGACACCCGGCGACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEWPRRR*TPGDSL Trigger: CAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCCGCCGCCTGGCAGCTaGGGGCAGCGGGGAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYPPPGS*GQRGEL Trigger: CAGTTCTCCCCGCTGCCCGCAGCTGCCAGGCGGCGG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGTGGCCGCGACGCCGCTaGACACCCGGCGACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMWPRRR*TPGDSL Trigger: CAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCA...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCCGCCGCCTGGCAGCTaGGGGCAGCGGGGAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMPPPGS*GQRGEL Trigger: CAGTTCTCCCCGCTGCCCGCAGCTGCCAGGCGGCGG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCCATGGCTATACATCTaGGCGCCGCCGCCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYPWLYI*APPPGS Trigger: GCTGCCAGGCGGCGGCGCCCAGATGTATAGCCATGG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGGCGTGAATGGAACCTaGTGCGCCGAGCCAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYGVNGT*CAEPEA Trigger: GGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACCAGAATCCCTCTACTaGCCGCGACGCCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEPESLY*PRRRCT Trigger: TGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTCCATGGCTATACATCTaGGCGCCGCCGCCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGPWLYI*APPPGS Trigger: GCTGCCAGGCGGCGGCGCCCAGATGTATAGCCATGG...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR TCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGCCAACAGACTTGGCGTaGATGGAACCTGCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKPTDLA*MEPAAP Trigger: CGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGG...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGTGAATGGAACCTGCTaGGCCGAGCCAGAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYVNGTC*AEPEAQ Trigger: CTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCAC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTGTTCCATGTCCGGCTaGTCCGGGTCCTACAACCGC | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKCSMSG*SGSYNR Trigger: GCGGTTGTAGGACCCGGAGCAGCCGGACATGGAACA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACAGACTTGGCGTGAATaGAACCTGCTGCGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEQTWRE*NLLRRA Trigger: GGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGGGCAGCGGGGAGAACTaGGGAACACGTCGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKGSGEN*GTRRSH Trigger: GTGACTTCGACGTGTTCCCCAGTTCTCCCCGCTGCC...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR TCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTCCAACAGACTTGGCGTaGATGGAACCTGCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGPTDLA*MEPAAP Trigger: CGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGG...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCCAGAATCCCTCTACTaGCCGCGACGCCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMPESLY*PRRRCT Trigger: TGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTCCTACAACCGCCCTTaGCCCTACAACTGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKSYNRP*PYNCHC Trigger: GCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGGTGAATGGAACCTGCTaGGCCGAGCCAGAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMVNGTC*AEPEAQ Trigger: CTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCAC...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR GCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACCTTGGCCCTACAACTaGCACTGCCAACAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEPWPYN*HCQQTW Trigger: CCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGTGTTCCATGTCCGGCTaGTCCGGGTCCTACAACCGC | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMCSMSG*SGSYNR Trigger: GCGGTTGTAGGACCCGGAGCAGCCGGACATGGAACA...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCAGACTTGGCGTGAATaGAACCTGCTGCGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMQTWRE*NLLRRA Trigger: GGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTTCCTACAACCGCCCTTaGCCCTACAACTGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGSYNRP*PYNCHC Trigger: GCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGA...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGGGCAGCGGGGAGAACTaGGGAACACGTCGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMGSGEN*GTRRSH Trigger: GTGACTTCGACGTGTTCCCCAGTTCTCCCCGCTGCC...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR GCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGCCCTACAACTGCCACTaGCAACAGACTTGGCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKPYNCH*QQTWRE Trigger: TTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGG...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGCACTGCCAACAGACTTaGCGTGAATGGAACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKHCQQT*REWNLL Trigger: CAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTG...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCCTTGGCCCTACAACTaGCACTGCCAACAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMPWPYN*HCQQTW Trigger: CCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGCCAATTCAATTCCATaGCTATACATCTGGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYANSIP*LYIWAP Trigger: CGGCGCCCAGATGTATAGCCATGGAATTGAATTGGC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR TCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAGCTTTGGCATGCTCCTaGTCCAAGGACTCAGAATTA | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEALACS*SKDSEL Trigger: TAATTCTGAGTCCTTGGATCAGGAGCATGCCAAAGC...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCCCTACAACTGCCACTaGCAACAGACTTGGCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMPYNCH*QQTWRE Trigger: TTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCAGCAAGATTCCATTTaGACGCCACAGAGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYQQDSI*TPQSSS Trigger: TGAAGAGCTCTGTGGCGTGCAAATGGAATCTTGCTG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCACTCTTCTTCCCGTTaGCTCAGTTCTGATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYHSSSR*LSSDTA Trigger: AGCAGTATCAGAACTGAGGCAACGGGAAGAAGAGTG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR GCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAAGAGACTGTAGCAGATaGCTCCCAGAATCAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPERDCSR*LPESTS Trigger: ACTGGTTGATTCTGGGAGGCATCTGCTACAGTCTCT...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACTATGGCATCAGTCAGTaGTTCCCACAACAGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYYGISQ*FPQQTQ Trigger: TTGGGTCTGTTGTGGGAACCACTGACTGATGCCATA...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGGCCAATTCAATTCCATaGCTATACATCTGGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMANSIP*LYIWAP Trigger: CGGCGCCCAGATGTATAGCCATGGAATTGAATTGGC...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGGTGAAACTAGGAATATaGCTCCTGTGTCTGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKVKLGI*LLCLPI Trigger: AATGGGCAGACACAGGAGCCATATTCCTAGTTTCAC...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCTACCAAGTTTCTGTTaGGCTTCAGCAAGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYLPSFC*ASARFH Trigger: ATGGAATCTTGCTGAAGCTCAACAGAAACTTGGTAG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACAGTCAAGGATTTAACTaGTGGTGCCGAAAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYSQGFN*WCRKSS Trigger: ACTTGACTTTCGGCACCATCAGTTAAATCCTTGACT...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAAAAACAAGATACAAATaGGGCCAAGGTCACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEKTRYK*GQGHRS Trigger: AGACCTGTGACCTTGGCCTCATTTGTATCTTGTTTT...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACACAGCAAGATTCCATTTaGACGCCACAGAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTQQDSI*TPQSSS Trigger: TGAAGAGCTCTGTGGCGTGCAAATGGAATCTTGCTG...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR GCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCACTCTTCTTCCCGTTaGCTCAGTTCTGATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMHSSSR*LSSDTA Trigger: AGCAGTATCAGAACTGAGGCAACGGGAAGAAGAGTG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACACTTCCTGCAACATATaGTACCACTCTTCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYTSCNI*YHSSLQ Trigger: CTGAAGAGAAGAGTGGTACCATATGTTGCAGGAAGT...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATCAGAAATAGGTAATTaGCAGCTCAAGGCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPESEIGN*QLKAVS Trigger: GCTAACTGCCTTGAGCTGCCAATTACCTATTTCTGA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATCCCTTCGCACTATTTaGTTTCTCAAGTTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPESLRTI*FLKLRH Trigger: GTGTCTCAACTTGAGAAACCAAATAGTGCGAAGGGA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| 3UTR CAA 72 bp | ATCTTTTCAGTGCCCCTCAAGAATAGTTTACTCAGTTaGTTGATACTTTCTCTCCTGCCAGTCTTCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFSVPLKNSLLS*LILSLLPVFSH Trigger: ATGACTGAAGACTGGCAGGAGAGAAAGTATCAACAAACTGAGTAAACTATTCTTGAGGGGCACTGAAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTCTACCAAGTTTCTGTTaGGCTTCAGCAAGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGLPSFC*ASARFH Trigger: ATGGAATCTTGCTGAAGCTCAACAGAAACTTGGTAG...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR TCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATTAAAACTTACTCCCTaGGAGATCCCAGACTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPELKLTP*EIPDYV Trigger: AACATAGTCTGGGATCTCTCAGGGAGTAAGTTTTAA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGTATTCTATGGTAACTaGGCTGAAAAAGGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYVFYGN*AEKGEM Trigger: CATTTCCCCTTTTTCAGCTCAGTTACCATAGAATAC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACATATCCTGGCATAACTaGAATGACTTACAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYISWHN*NDLQRK Trigger: CTTCCTCTGTAAGTCATTTCAGTTATGCCAGGATAT...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGAAGGACTCAGAATTATaGAGTGCTAAGCTACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKKDSEL*SAKLPS Trigger: ACTTGGTAGCTTAGCACTGCATAATTCTGAGTCCTT...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACATACAAGGTATGGATaGTCAGACAAAAATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEHTRYG*SDKNLW Trigger: CCAGAGATTTTTGTCTGACCATCCATACCTTGTATG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTTCTCAGCTTCCAGGTaGAAACACCATAAAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKFSASR*KHHKIR Trigger: TCTTATTTTATGGTGTTTTCACCTGGAAGCTGAGAA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATGCATTACAACAGCTTaGTGTGCTATTTGTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPECITTA*CAICSI Trigger: AATGGAACAAATAGCACATCAAGCTGTTGTAATGCA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAATTCACAAACTCTTTCTaGTTTTGGCAAGCCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEFTNSF*FWQANS Trigger: TGAATTGGCTTGCCAAAAGCAGAAAGAGTTTGTGAA...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACATAACCTTCTTCCTCTaGTTTGGCTTTCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYITFFL*FGFLEK Trigger: TTTTTCCAGAAAGCCAAAGCAGAGGAAGAAGGTTAT...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCGAACAAAAATAAAGTaGAGCACCCATAAAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYRTKIK*STHKSV Trigger: GACACTTTTATGGGTGCTGCACTTTATTTTTGTTCG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACAGAACATCTTTTCAGTaGCCCTCAAGAATAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYRTSFQ*PSRIVY Trigger: GTAAACTATTCTTGAGGGGCACTGAAAAGATGTTCT...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTCATACAAGGTATGGATaGTCAGACAAAAATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGHTRYG*SDKNLW Trigger: CCAGAGATTTTTGTCTGACCATCCATACCTTGTATG...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGACGAAAACACCCTCTTaGATCCACATTACAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTFSPASLQSLNTSNLEKTKTPS*IHITVF Trigger: AAAAACTGTAATGTGGATCCAAGAGGGTGTTTTCGT...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR GCA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAAAGGACTCAGAATTATaGAGTGCTAAGCTACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTKDSEL*SAKLPS Trigger: ACTTGGTAGCTTAGCACTGCATAATTCTGAGTCCTT...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTATAACCTTCTTCCTCTaGTTTGGCTTTCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGITFFL*FGFLEK Trigger: TTTTTCCAGAAAGCCAAAGCAGAGGAAGAAGGTTAT...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACAGTGTCCATCATTTTaGGTTCATCATCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEQCPSF*VHHLLY Trigger: ATAAAGAAGATGATGAACCCAAAATGATGGACACTG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR CCA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGGAAGTAGTAAAGCTTaGAAGTATTCTATGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYGSSKA*KYSMVT Trigger: AGTTACCATAGAATACTTCCAAGCTTTACTACTTCC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS-3UTR TCA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACATTCTCAGCTTCCAGGTaGAAACACCATAAAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTFSASR*KHHKIR Trigger: TCTTATTTTATGGTGTTTTCACCTGGAAGCTGAGAA...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR TCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGTGCATTACAACAGCTTaGTGTGCTATTTGTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMCITTA*CAICSI Trigger: AATGGAACAAATAGCACATCAAGCTGTTGTAATGCA...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR TCA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACACCTCACATTGTCTTTTaGATAAGACTTTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTPHIVF*IRLSFS Trigger: TGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGG...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR GCA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACATTCACAAACTCTTTCTaGTTTTGGCAAGCCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTFTNSF*FWQANS Trigger: TGAATTGGCTTGCCAAAAGCAGAAAGAGTTTGTGAA...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGACGAAAACACCCTCTTaGATCCACATTACAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMTKTPS*IHITVF Trigger: AAAAACTGTAATGTGGATCCAAGAGGGTGTTTTCGT...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTGACAACAGATTAAACTaGCTAAAGCTGGTCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGDNRLN*LKLVLK Trigger: TTTTAAGACCAGCTTTAGCCAGTTTAATCTGTTGTC...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
||
| CDS GCA 90 bp | GGTCCGGGCCGTTACCCAGAATCCCTCTACTGGCCGCGACGCCGCTaGACACCCGGCGACAGCCTGGGCCTCGCCACCGGCGGACGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRYPESLYWPRRR*TPGDSLGLATGGRR Trigger: CCGCCGTCCGCCGGTGGCGAGGCCCAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGGGTAACGGCCCGGACC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS CCA 90 bp | AGAAGCCCAGCCGGGGGTCCGGGCCGTTACCCAGAATCCCTCTACTaGCCGCGACGCCGCTGCACACCCGGCGACAGCCTGGGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPAGGPGRYPESLY*PRRRCTPGDSLGLA Trigger: GGCGAGGCCCAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGGGTAACGGCCCGGACCCCCGGCTGGGCTTCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS GCA 90 bp | AGGCTCCAGGGTCCCGGAGGCGGCCACGGTTGTTCCATGTCCGGCTaGTCCGGGTCCTACAACCGCCCTTGGCCCTACAACTGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQGPGGGHGCSMSG*SGSYNRPWPYNCHC Trigger: GCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACATGGAACAACCGTGGCCGCCTCCGGGACCCTGGAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
||
| CDS CCA 90 bp | CGCCCTTGGCCCTACAACTGCCACTGCCAACAGACTTGGCGTGAATaGAACCTGCTGCGCCGAGCCAGAAGCCCAGCCGGGGGTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPWPYNCHCQQTWRE*NLLRRARSPAGGPG Trigger: GCCCGGACCCCCGGCTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS GCA 90 bp | GGCTGCTCCGGGTCCTACAACCGCCCTTGGCCCTACAACTGCCACTaGCAACAGACTTGGCGTGAATGGAACCTGCTGCGCCGAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSGSYNRPWPYNCH*QQTWREWNLLRRAR Trigger: TCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS CCA 90 bp | TCCTACAACCGCCCTTGGCCCTACAACTGCCACTGCCAACAGACTTaGCGTGAATGGAACCTGCTGCGCCGAGCCAGAAGCCCAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SYNRPWPYNCHCQQT*REWNLLRRARSPAG Trigger: CCCGGCTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS GCA 90 bp | ATGTCCGGCTGCTCCGGGTCCTACAACCGCCCTTGGCCCTACAACTaGCACTGCCAACAGACTTGGCGTGAATGGAACCTGCTGCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: MSGCSGSYNRPWPYN*HCQQTWREWNLLRR Trigger: TCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS CCA 90 bp | CACGGTTGTTCCATGTCCGGCTGCTCCGGGTCCTACAACCGCCCTTaGCCCTACAACTGCCACTGCCAACAGACTTGGCGTGAATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGCSMSGCSGSYNRP*PYNCHCQQTWREWN Trigger: GTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACATGGAACAACCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
||
| CDS-3UTR CAA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACCGGAGGCGGCCACGGTaGTTCCATGTCCGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYRRRPR*FHVRLL Trigger: GAGCAGCCGGACATGGAACAACCGTGGCCGCCTCCG...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS TCA 90 bp | AGCTTCTTCTTTCTGTCGCCACTCTTCTTCCCGTTGCCTCAGTTCTaGTACTGCTGTTTGTGCTTTGGCATGCTCCTGATCCAAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SFFFLSPLFFPLPQF*YCCLCFGMLLIQGL Trigger: GAGTCCTTGGATCAGGAGCATGCCAAAGCACAAACAGCAGTATCAGAACTGAGGCAACGGGAAGAAGAGTGGCGACAGAAAGAAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS-3UTR CAA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACACGGAGGCGGCCACGGTaGTTCCATGTCCGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTRRRPR*FHVRLL Trigger: GAGCAGCCGGACATGGAACAACCGTGGCCGCCTCCG...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS CCA 90 bp | ACTCTTCTTCCCGTTGCCTCAGTTCTGATACTGCTGTTTGTGCTTTaGCATGCTCCTGATCCAAGGACTCAGAATTATGCAGTGCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLPVASVLILLFVL*HAPDPRTQNYAVLS Trigger: GCTTAGCACTGCATAATTCTGAGTCCTTGGATCAGGAGCATGCCAAAGCACAAACAGCAGTATCAGAACTGAGGCAACGGGAAGAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS-3UTR CAA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAGTCCTACAACCGCCCTaGGCCCTACAACTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEVLQPP*ALQLPL Trigger: CAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGAC...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS TCA 90 bp | CGTTGCCTCAGTTCTGATACTGCTGTTTGTGCTTTGGCATGCTCCTaGTCCAAGGACTCAGAATTATGCAGTGCTAAGCTACCAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCLSSDTAVCALACS*SKDSELCSAKLPSF Trigger: GAAACTTGGTAGCTTAGCACTGCATAATTCTGAGTCCTTGGATCAGGAGCATGCCAAAGCACAAACAGCAGTATCAGAACTGAGGCAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS GCA 90 bp | GCAAGATTCCATTTGCACGCCACAGAGCTCTTCACAAACTCTTTCTaGTTTTGGCAAGCCAATTCAATTCCATGGCTATACATCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARFHLHATELFTNSF*FWQANSIPWLYIWA Trigger: CGCCCAGATGTATAGCCATGGAATTGAATTGGCTTGCCAAAAGCAGAAAGAGTTTGTGAAGAGCTCTGTGGCGTGCAAATGGAATCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS-3UTR CAA 90 bp | ATAAGACTTTCCTTCTCACAATGTAGACAACAGATTAAACTGGCTAAAGCTGGTGTCCTACAACCGCCCTaGGCCCTACAACTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IRLSFSQCRQQIKLAKAGVLQPP*ALQLPL Trigger: CAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGAC...ACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS TCA 90 bp | TCCAAGGACTCAGAATTATGCAGTGCTAAGCTACCAAGTTTCTGTTaGGCTTCAGCAAGATTCCATTTGCACGCCACAGAGCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SKDSELCSAKLPSFC*ASARFHLHATELFT Trigger: TGTGAAGAGCTCTGTGGCGTGCAAATGGAATCTTGCTGAAGCTCAACAGAAACTTGGTAGCTTAGCACTGCATAATTCTGAGTCCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS-3UTR CAA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACTCAGCAAGATTCCATTaGCACGCCACAGAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYSARFH*HATELF Trigger: GAAGAGCTCTGTGGCGTGCAAATGGAATCTTGCTGA...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CAA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAACCACCTTCCAAGTGTTaGCTACTAGCCTTAATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IGHVHIHIKRDCSRCLPEPPSKC*LLALMG Trigger: ACCCATTAAGGCTAGTAGCAAACACTTGGAAGGTGG...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS CCA 90 bp | CTTGGCCTCAGCAGTCTTAACCAAATTATACAGTGTCCATCATTTTaGGTTCATCATCTTCTTTATGTACCACCGAGTTTAAGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSLNQIIQCPSF*VHHLLYVPPSLSCR Trigger: TCTGCAGCTTAAACTCGGTGGTACATAAAGAAGATGATGAACCCAAAATGATGGACACTGTATAATTTGGTTAAGACTGCTGAGGCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS TCA 90 bp | TGGTCACTTAACTGCCTGGAGTCTGCAGCTCTACAGCAAGAGCTTTaGGACTTTTTGACTTTCATAAACTTTTCAAGCACCTTTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: WSLNCLESAALQQEL*DFLTFINFSSTFHK Trigger: TTTATGAAAGGTGCTTGAAAAGTTTATGAAAGTCAAAAAGTCTCAAAGCTCTTGCTGTAGAGCTGCAGACTCCAGGCAGTTAAGTGACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CCA 90 bp | GCAGTTTCTTCACATACAAGGTATGGATGGTCAGACAAAAATCTCTaGCTATCATCCCATCGACTCAACATACCAAAATGTCTGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVSSHTRYGWSDKNL*LSSHRLNIPKCLIF Trigger: AAAAATCAGACATTTTGGTATGTTGAGTCGATGGGATGATAGCCAGAGATTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS-3UTR CAA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGTTATTAAAAACATCCTaGCTAATGGCATCCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DTFSPASLQSLNTSNLEKLLKTS*LMASVL Trigger: GAGCACGGATGCCATTAGCAAGGATGTTTTTAATAA...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CAA 90 bp | GATACTTTCTCTCCTGCCAGTCTTCAGTCATTAAATACCTCTAACTTAGAGAAGCTGCATTACAACAGCTaGATGTGCTATTTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DTFSPASLQSLNTSNLEKLHYNS*MCYLFH Trigger: ATGGAACAAATAGCACATCAAGCTGTTGTAATGCAG...CTTCTCTAAGTTAGAGGTATTTAATGACTGAAGACTGGCAGGAGAGAAAGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CAA 90 bp | AGCAAATTTAGTAGCCACAAAAAGTCCAGTTTGACTTCCTGCAACATATGGTACGATGAAACACCAAATTaGACAGCTAAAGTAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKFSSHKKSSLTSCNIWYDETPN*TAKVAV Trigger: CACTGCTACTTTAGCTGTCAAATTTGGTGTTTCATC...GTACCATATGTTGCAGGAAGTCAAACTGGACTTTTTGTGGCTACTAAATTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS-3UTR CAA 90 bp | ATAGGACATGTACATATCCATATAAAAAGAGACTGTAGCAGATGCCTCCCAGAAACAGTGTCCATCATTTaGGGTTCATCATCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: IGHVHIHIKRDCSRCLPETVSII*GSSSSL Trigger: TAAAGAAGATGATGAACCCAAAATGATGGACACTGT...TTCTGGGAGGCATCTGCTACAGTCTCTTTTTATATGGATATGTACATGTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381854.4 |
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| CDS GCA 90 bp | CATAAACTGTCAAAATTGAACACTGTTTATGGGATTCTGCTGCTTTaGTACCAAATACGCACAACTGGTTTGTACAAACACTTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HKLSKLNTVYGILLL*YQIRTTGLYKHFSF Trigger: AAAACTGAAGTGTTTGTACAAACCAGTTGTGCGTATTTGGTAGCAAAGCAGCAGAATCCCATAAACAGTGTTCAATTTTGACAGTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS-3UTR CAA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGTTATTAAAAACATCCTaGCTAATGGCATCCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMLLKTS*LMASVL Trigger: GAGCACGGATGCCATTAGCAAGGATGTTTTTAATAA...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS-3UTR CAA 90 bp | AATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACAATGCTGCATTACAACAGCTaGATGTGCTATTTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NIGLSSHCLLNKTFLLTMLHYNS*MCYLFH Trigger: ATGGAACAAATAGCACATCAAGCTGTTGTAATGCAG...CATTGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS CCA 90 bp | CATAAAATAAGATATTTAGCAGTTTCTTCACATACAAGGTATGGATaGTCAGACAAAAATCTCTGGCTATCATCCCATCGACTCAACATA | + |
|
Preference number: 5 (lower is better) Translates to: HKIRYLAVSSHTRYG*SDKNLWLSSHRLNI Trigger: TATGTTGAGTCGATGGGATGATAGCCAGAGATTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGCTAAATATCTTATTTTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS-3UTR CAA 90 bp | CTAAATATAGGACTCTCCTCACATTGTCTTTTGAATAAGACTTTCCTTCTCACATCCTCACATTGTCTTTaGAATAAGACTTTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNIGLSSHCLLNKTFLLTSSHCL*NKTFLL Trigger: GAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGA...TGTGAGAAGGAAAGTCTTATTCAAAAGACAATGTGAGGAGAGTCCTATATTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS CCA 72 bp | GCCGGGGGTCCGGGCCGTTACCCAGAATCCCTCTACTaGCCGCGACGCCGCTGCACACCCGGCGACAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGGPGRYPESLY*PRRRCTPGDSL Trigger: CAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGGGTAACGGCCCGGACCCCCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS GCA 72 bp | CGTTACCCAGAATCCCTCTACTGGCCGCGACGCCGCTaGACACCCGGCGACAGCCTGGGCCTCGCCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYPESLYWPRRR*TPGDSLGLATG Trigger: GCCGGTGGCGAGGCCCAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCAGTAGAGGGATTCTGGGTAACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CCA 72 bp | ACTGGCCGCGACGCCGCTGCACACCCGGCGACAGCCTaGGCCTCGCCACCGGCGGACGGCGGAAGAAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: TGRDAAAHPATA*ASPPADGGRNS Trigger: ACTATTTCTTCCGCCGTCCGCCGGTGGCGAGGCCCAGGCTGTCGCCGGGTGTGCAGCGGCGTCGCGGCCAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS GCA 72 bp | GGTCCCGGAGGCGGCCACGGTTGTTCCATGTCCGGCTaGTCCGGGTCCTACAACCGCCCTTGGCCCTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: GPGGGHGCSMSG*SGSYNRPWPYN Trigger: GTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACATGGAACAACCGTGGCCGCCTCCGGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS CCA 72 bp | CGCCGCCGCCTGGCAGCTGCGGGCAGCGGGGAGAACTaGGGAACACGTCGAAGTCACTCTCTTCCTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRLAAAGSGEN*GTRRSHSLPQP Trigger: AGGCTGAGGAAGAGAGTGACTTCGACGTGTTCCCCAGTTCTCCCCGCTGCCCGCAGCTGCCAGGCGGCGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS GCA 72 bp | ACTGCCACTGCCAACAGACTTGGCGTGAATGGAACCTaGTGCGCCGAGCCAGAAGCCCAGCCGGGGGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TATANRLGVNGT*CAEPEAQPGVR Trigger: CCGGACCCCCGGCTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CCA 72 bp | CCCTACAACTGCCACTGCCAACAGACTTGGCGTGAATaGAACCTGCTGCGCCGAGCCAGAAGCCCAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PYNCHCQQTWRE*NLLRRARSPAG Trigger: CCCGGCTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CCA 72 bp | CGCCCTTGGCCCTACAACTGCCACTGCCAACAGACTTaGCGTGAATGGAACCTGCTGCGCCGAGCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPWPYNCHCQQT*REWNLLRRARS Trigger: GCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CCA 72 bp | TCCATGTCCGGCTGCTCCGGGTCCTACAACCGCCCTTaGCCCTACAACTGCCACTGCCAACAGACTTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SMSGCSGSYNRP*PYNCHCQQTWR Trigger: ACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CAA 72 bp | TTCCATGTCCGGCTGCTCCGGGTCCTACAACCGCCCTaGGCCCTACAACTGCCACTGCCAACAGACTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FHVRLLRVLQPP*ALQLPLPTDLA Trigger: CGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCAGCCGGACATGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS TCA 72 bp | TTGGCCCTACAACTGCCACTGCCAACAGACTTGGCGTaGATGGAACCTGCTGCGCCGAGCCAGAAGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LALQLPLPTDLA*MEPAAPSQKPS Trigger: GCTGGGCTTCTGGCTCGGCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS GCA 72 bp | GGGTCCTACAACCGCCCTTGGCCCTACAACTGCCACTaGCAACAGACTTGGCGTGAATGGAACCTGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSYNRPWPYNCH*QQTWREWNLLR Trigger: GCGCAGCAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS GCA 72 bp | TGCTCCGGGTCCTACAACCGCCCTTGGCCCTACAACTaGCACTGCCAACAGACTTGGCGTGAATGGAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSGSYNRPWPYN*HCQQTWREWNL Trigger: CAGGTTCCATTCACGCCAAGTCTGTTGGCAGTGGCAGTTGTAGGGCCAAGGGCGGTTGTAGGACCCGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS TCA 72 bp | TCAGAATTATGCAGTGCTAAGCTACCAAGTTTCTGTTaGGCTTCAGCAAGATTCCATTTGCACGCCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SELCSAKLPSFC*ASARFHLHATE Trigger: CTCTGTGGCGTGCAAATGGAATCTTGCTGAAGCTCAACAGAAACTTGGTAGCTTAGCACTGCATAATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS TCA 72 bp | AGTTCTGATACTGCTGTTTGTGCTTTGGCATGCTCCTaGTCCAAGGACTCAGAATTATGCAGTGCTAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSDTAVCALACS*SKDSELCSAKL Trigger: TAGCTTAGCACTGCATAATTCTGAGTCCTTGGATCAGGAGCATGCCAAAGCACAAACAGCAGTATCAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS GCA 72 bp | TACCAAGTTTCTGTTGAGCTTCAGCAAGATTCCATTTaGACGCCACAGAGCTCTTCACAAACTCTTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YQVSVELQQDSI*TPQSSSQTLSA Trigger: AGCAGAAAGAGTTTGTGAAGAGCTCTGTGGCGTGCAAATGGAATCTTGCTGAAGCTCAACAGAAACTTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381854.4 ENST00000381858.5 ENST00000479095.1 |
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| CDS CAA 72 bp | GGCCCAGTAAAAGCTCATACCTTATTAAAAACATCCTaGCTAATGGCATCCGTGCTCCACAGACACATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPVKAHTLLKTS*LMASVLHRHIF Trigger: GAAGATGTGTCTGTGGAGCACGGATGCCATTAGCAAGGATGTTTTTAATAAGGTATGAGCTTTTACTGGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CCA 72 bp | GACTTTCCTTCTCACAATGTAGACAACAGATTAAACTaGCTAAAGCTGGTCTTAAAATCTTGGAGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DFPSHNVDNRLN*LKLVLKSWSLW Trigger: CCACAGGCTCCAAGATTTTAAGACCAGCTTTAGCCAGTTTAATCTGTTGTCTACATTGTGAGAAGGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381858.5 |
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| CDS CCA 72 bp | TATAAATATGTATTTCAGTCTGGTCACTTAACTGCCTaGAGTCTGCAGCTCTACAGCAAGAGCTTTGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: YKYVFQSGHLTA*SLQLYSKSFET Trigger: AGTCTCAAAGCTCTTGCTGTAGAGCTGCAGACTCCAGGCAGTTAAGTGACCAGACTGAAATACATATTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CAA 90 bp | TTTCATTATGGCCCAGTAAAAGCTCATACCTTATTAAAAACATCCTaGCTAATGGCATCCGTGCTCCACAGACACATCTTCTCTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FHYGPVKAHTLLKTS*LMASVLHRHIFSLC Trigger: ACAAAGAGAGAAGATGTGTCTGTGGAGCACGGATGCCATTAGCAAGGATGTTTTTAATAAGGTATGAGCTTTTACTGGGCCATAATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CCA 72 bp | TCACATACAAGGTATGGATGGTCAGACAAAAATCTCTaGCTATCATCCCATCGACTCAACATACCAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SHTRYGWSDKNL*LSSHRLNIPKC Trigger: ACATTTTGGTATGTTGAGTCGATGGGATGATAGCCAGAGATTTTTGTCTGACCATCCATACCTTGTATGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381854.4 ENST00000381858.5 |
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| CDS CCA 72 bp | TGGGATTCTGCTGCTTTGCTACCAAATACGCACAACTaGTTTGTACAAACACTTCAGTTTTTCTTCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WDSAALLPNTHN*FVQTLQFFFFH Trigger: ATGAAAGAAGAAAAACTGAAGTGTTTGTACAAACCAGTTGTGCGTATTTGGTAGCAAAGCAGCAGAATCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CAA 90 bp | TTGACTTTCATAAACTTTTCAAGCACCTTTCATAAACTGTCAAAATaGAACACTGTTTATGGGATTCTGCTGCTTTGCTACCAAATACGC | + |
|
Preference number: 6 (lower is better) Translates to: LTFINFSSTFHKLSK*NTVYGILLLCYQIR Trigger: GCGTATTTGGTAGCAAAGCAGCAGAATCCCATAAACAGTGTTCAATTTTGACAGTTTATGAAAGGTGCTTGAAAAGTTTATGAAAGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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| CDS CCA 72 bp | AGCAGTCTTAACCAAATTATACAGTGTCCATCATTTTaGGTTCATCATCTTCTTTATGTACCACCGAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLNQIIQCPSF*VHHLLYVPPSL Trigger: TAAACTCGGTGGTACATAAAGAAGATGATGAACCCAAAATGATGGACACTGTATAATTTGGTTAAGACTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381854.4 |
||
| CDS CAA 72 bp | ATAAACTTTTCAAGCACCTTTCATAAACTGTCAAAATaGAACACTGTTTATGGGATTCTGCTGCTTTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: INFSSTFHKLSK*NTVYGILLLCY Trigger: GTAGCAAAGCAGCAGAATCCCATAAACAGTGTTCAATTTTGACAGTTTATGAAAGGTGCTTGAAAAGTTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479095.1 |
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