RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC34 (Homo sapiens)

Ensembl gene IDs: ENSG00000099804

Ensembl transcript IDs: ENST00000215574.9, ENST00000586283.6, ENST00000586788.1, ENST00000593036.4, ENST00000606065.3, ENST00000606400.3, ENST00000607527.5

Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGA +
Preference number: 1 (lower is better)
Translates to: GKESATVNPSTLCWT*LQDLELTGRTGPLG
Trigger: TCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR TCA 90 bp CTCCTCCACCTCGCCGTCCTCGTAGTAGTCGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTC +
Preference number: 1 (lower is better)
Translates to: LLHLAVLVVVVVEEV*ALVGRRRLGLHAVL
Trigger: GAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTACGAGGACGGCGAGGTGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR CCA 90 bp AAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTaGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCC +
Preference number: 1 (lower is better)
Translates to: KQGKESATVNPSTLC*TWLQDLELTGRTGP
Trigger: GGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR GCA 90 bp CCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTaGTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGG +
Preference number: 1 (lower is better)
Translates to: PKQGKESATVNPSTL*WTWLQDLELTGRTG
Trigger: CCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR CCA 90 bp CACGGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTaGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCG +
Preference number: 1 (lower is better)
Translates to: HGSGPSEVNSASLFW*CQDSSVPESSSSSP
Trigger: CGGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR CCA 90 bp AGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTaGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCC +
Preference number: 1 (lower is better)
Translates to: SHGSGPSEVNSASLF*WCQDSSVPESSSSS
Trigger: GGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR TCA 90 bp TTTAGATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGACCTGGAGC +
Preference number: 1 (lower is better)
Translates to: FRFQTNQSREKSRPR*IRPLCAGRGSRTWS
Trigger: GCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp AGGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGG +
Preference number: 2 (lower is better)
Translates to: RGQVGRPLPPWARPPSPEVVEEV*ALVGRR
Trigger: CCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGAC...CTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCCCACCGAGCCCCGAGTaGCGTGAGTGGCGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTPPSPE*REWRWG
Trigger: GCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGG...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCTCCAGGACCTGGAGCTaGCAGGCAGGACCGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTSRTWS*QAGPGP
Trigger: GGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGA...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR GCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGTGGCTCCTCCGGGGTaGGGCCAGTCCGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTVAPPG*GQSGSW
Trigger: CCAGCTTCCGGACTGGCCGCACCCCGGAGGAGCCAC...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR GCA 90 bp GGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGGTCAGGACTCCTCCGTaGCAGAGTCATCCTCATCGT +
Preference number: 2 (lower is better)
Translates to: GTGGPAAPTLGPSTEPRVVRTPP*QSHPHR
Trigger: ACGATGAGGATGACTCTGGCACGGAGGAGTCCTGAC...CACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 2 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp TGCTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG +
Preference number: 2 (lower is better)
Translates to: CWTWLQDLELTGRTGPLGRAPAP*SSRSTR
Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...TCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp GTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACAGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 2 (lower is better)
Translates to: VAPGPGADRQDRAPRTATGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...TGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp ACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTAGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 2 (lower is better)
Translates to: TWLQDLELTGRTGPLGPLGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...TAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR GCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGTCAGGACTCCTCCGTaGCAGAGTCATCCTCATCGT +
Preference number: 2 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSVRTPP*QSHPHR
Trigger: ACGATGAGGATGACTCTGGCACGGAGGAGTCCTGAC...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp TGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: WTWLQDLELTGRTGPLGPTLCWT*LQDLEL
Trigger: CAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGT...CGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp AAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGACCACCGAGCCCCGAGTaGCGTGAGTGGCGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: KRVGHGESVHSVLDVAPGPPSPE*REWRWG
Trigger: GCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGG...TCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp GTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACAAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: VAPGPGADRQDRAPRTATKSRPR*IRPLCA
Trigger: AGCACAGAGTGGACGGATTCACCGTGGCCGACTCTT...TGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR GCA 90 bp TCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGGTGGCTCCTCCGGGGTaGGGCCAGTCCGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: SNKPKQGKESATVNPSTLVAPPG*GQSGSW
Trigger: CCAGCTTCCGGACTGGCCGCACCCCGGAGGAGCCAC...CAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp ATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTGAGCCCCGAGTGACGTaGGTGGCGGTGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: ISNKPKQGKESATVNPSTEPRVT*VAVGQP
Trigger: GGGCTGCCCCACCGCCACTCACGTCACTCGGGGCTC...AGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp CCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCAGCACAAAACCTCCGTaGGGTAGTCTGTCGTCTAAG +
Preference number: 2 (lower is better)
Translates to: PAQNLREVVCRLRSHGSGSTKPP*GSLSSK
Trigger: CTTAGACGACAGACTACCTCACGGAGGTTTTGTGCT...GCCGGACCCGTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGCAAGTTTATTCTGGTaGTGTCAGGACTCCTCCGTG +
Preference number: 2 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDASLFW*CQDSSV
Trigger: CACGGAGGAGTCCTGACACCACCAGAATAAACTTGC...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR TCA 90 bp TCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGAGCACAAAACCTCCGTaGGGTAGTCTGTCGTCTAAG +
Preference number: 2 (lower is better)
Translates to: SNKPKQGKESATVNPSTLSTKPP*GSLSSK
Trigger: CTTAGACGACAGACTACCTCACGGAGGTTTTGTGCT...CAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR TCA 72 bp CCACTCTGTGCTGGACGTGGCTCCAGGACCTGGAGCTaGCAGGCAGGACCGGGCCCCTCGGACCGCTACACC +
Preference number: 3 (lower is better)
Translates to: PLCAGRGSRTWS*QAGPGPSDRYT
Trigger: GGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR CCA 72 bp AGAAGAGGTCTGAGCCCTCGTCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGGCCAGCGTGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: RRGLSPRRAPAP*SSRSTRPAWWA
Trigger: TGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR CCA 72 bp TCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGG +
Preference number: 3 (lower is better)
Translates to: SATVNPSTLCWT*LQDLELTGRTG
Trigger: CCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR TCA 72 bp CTCGCCGTCCTCGTAGTAGTCGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCAC +
Preference number: 3 (lower is better)
Translates to: LAVLVVVVVEEV*ALVGRRRLGLH
Trigger: GTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTACGAGGACGGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR GCA 72 bp GGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTaGTGGACGTGGCTCCAGGACCTGGAGCTGACAGGC +
Preference number: 3 (lower is better)
Translates to: GKESATVNPSTL*WTWLQDLELTG
Trigger: GCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR CCA 72 bp AAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTaGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGG +
Preference number: 3 (lower is better)
Translates to: KESATVNPSTLC*TWLQDLELTGR
Trigger: CCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR-3UTR CAA 90 bp TTTATTCTGGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG +
Preference number: 3 (lower is better)
Translates to: FILVVSGLLRARVILIVPSGAGA*VFTQYS
Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR TCA 72 bp CAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCTGGACGTGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: QTNQSREKSRPR*IRPLCAGRGSR
Trigger: CCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
3UTR GCA 72 bp CGGCAAGTTTATTCTGGTGGTGTCAGGACTCCTCCGTaGCAGAGTCATCCTCATCGTCCCCGAAGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: RQVYSGGVRTPP*QSHPHRPRSSC
Trigger: ACAGCTGCTTCGGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAACTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
3UTR CCA 72 bp GGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTaGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: GPSEVNSASLFW*CQDSSVPESSS
Trigger: TGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp GGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGTGGCTCCTCCGGGGTaGGGCCAGTCCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDRWAGRSHPGPVHRAPSVAPPG*GQSGSW
Trigger: CCAGCTTCCGGACTGGCCGCACCCCGGAGGAGCCAC...ACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGGCGCCTTCTGCGAGCTaGGCACTAGCGGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGQVGRPLPPWARPPSPEAPSAS*ALAAEP
Trigger: TGGCTCGGCCGCTAGTGCCCAGCTCGCAGAAGGCGC...CTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR GCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGTGGCTCCTCCGGGGTaGGGCCAGTCCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSVAPPG*GQSGSW
Trigger: CCAGCTTCCGGACTGGCCGCACCCCGGAGGAGCCAC...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RGQVGRPLPPWARPPSPEGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...CTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp GGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGGGCCTCCCAGGGTGGCTCCTCCGGGGTaGGGCCAGTCCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GADRQDRAPRTATPGPPRVAPPG*GQSGSW
Trigger: CCAGCTTCCGGACTGGCCGCACCCCGGAGGAGCCAC...CCTGGGAGGCCCAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGT +
Preference number: 4 (lower is better)
Translates to: GDRWAGRSHPGPVHRAPSSTRPA*WAPSRR
Trigger: ACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACT...ACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG +
Preference number: 4 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSRAPAP*SSRSTR
Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGGGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTCGGACCGCTACACCTaGGCCTCCCAGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RGQVGRPLPPWARPPSPESDRYT*ASQAGS
Trigger: ACTACCAGCCTGGGAGGCCCAGGTGTAGCGGTCCGA...CTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp TCTGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCCCACCGAGCCCCGAGTaGCGTGAGTGGCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SEPSSGAGALVFTQYSASPPSPE*REWRWG
Trigger: GCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGG...GCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp TGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGTCCAGGACCTGGAGCTaGCAGGCAGGACCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WTWLQDLELTGRTGPLGPSRTWS*QAGPGP
Trigger: GGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGA...CGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp TCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTGGTGGGCACCTCCAGGACCTGGAGCTaGCAGGCAGGACCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SGAGALVFTQYSASVVGTSRTWS*QAGPGP
Trigger: GGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGA...GGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GGGACAGGTGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGTCGTCCACCGGCGGGTaGAGGATGGAGATACACACG +
Preference number: 4 (lower is better)
Translates to: GTGGPAAPTLGPSTEPRVSSTGG*RMEIHT
Trigger: CGTGTGTATCTCCATCCTCCACCCGCCGGTGGACGA...CACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCACCTGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSAPRPP*SPGPAD
Trigger: ATCCGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586283.6
CDS-3UTR TCA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGTCCAGGACCTGGAGCTaGCAGGCAGGACCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLSRTWS*QAGPGP
Trigger: GGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGA...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGCTCCGCGTCCACCTTaGTCCCCAGGACCGGATGAT +
Preference number: 4 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSAPRPP*SPGPDD
Trigger: ATCATCCGGTCCTGGGGACCAAGGTGGACGCGGAGC...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606065.3
CDS-3UTR CCA 90 bp CCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGGGCCGGCGGGTGGAGGATaGAGATACACACGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PGPGADRQDRAPRTATPGPAGGG*RYTRPP
Trigger: CGGGGGACGTGTGTATCTCCATCCTCCACCCGCCGG...CCCAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TGGGCCGGCCGCTCCCACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTTCGTCCACCGGCGGGTaGAGGATGGAGATACACACG +
Preference number: 4 (lower is better)
Translates to: WAGRSHPGPVHRAPSDVSSSTGG*RMEIHT
Trigger: CGTGTGTATCTCCATCCTCCACCCGCCGGTGGACGA...ACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTGGGAGCGGCCGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCACTCGGCCAGCGTGGTaGGCACCTTCACGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTTRPAW*APSRRH
Trigger: GTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGT...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp ACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTAAGCAGCAGCGCCTTCTaGGAGCTGGGCACTAGCGGC +
Preference number: 4 (lower is better)
Translates to: TWLQDLELTGRTGPLGPLSSSAF*ELGTSG
Trigger: GCCGCTAGTGCCCAGCTCGCAGAAGGCGCTGCTGCT...TAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR CCA 90 bp TGCTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGGCGGGTGGAGGATaGAGATACACACGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: CWTWLQDLELTGRTGPLGPAGGG*RYTRPP
Trigger: CGGGGGACGTGTGTATCTCCATCCTCCACCCGCCGG...TCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp ACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTAACTCGGCCAGCGTGGTaGGCACCTTCACGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: TWLQDLELTGRTGPLGPLTRPAW*APSRRH
Trigger: GTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGT...TAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGAAGAGGTCTGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTTCCCGAGGGGACAGGTaGGCCGGCCGCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: RRGLSPRRAPAPWSSRSTSRGDR*AGRSHP
Trigger: AGGGTGGGAGCGGCCGGCCCACCTGTCCCCTCGGGA...AGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGGGTCGGACCGCTACACCTaGGCCTCCCAGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PGPGADRQDRAPRTATPGSDRYT*ASQAGS
Trigger: ACTACCAGCCTGGGAGGCCCAGGTGTAGCGGTCCGA...CCCAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp CCGTCCACTCTGTGCTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PSTLCWTWLQDLELTGRTVVEEV*ALVGRR
Trigger: CCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGAC...GGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp GTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACAGGAGGCGTCCACGTTTaGGGGCGAGAAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VAPGPGADRQDRAPRTATGGVHV*GREGVG
Trigger: CCCAACACCTTCTCGCCCGCAAACGTGGACGCCTCC...TGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp ACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACCGTCCACTCTGTGCTaGACGTGGCTCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: TWLQDLELTGRTGPLGPLPSTLC*TWLQDL
Trigger: CAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGG...TAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp CTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCAATCCGTCCACTCTGTaGTGGACGTGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LDVAPGPGADRQDRAPRTNPSTL*WTWLQD
Trigger: GTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATT...GGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGGCGGTGGGGCAGCCCAGGAACCGAAAGGCTaGTGGAGAGTATGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: HPGPVHRAPSDVSGGGAAQEPKG*WRVWVV
Trigger: GACTACCCATACTCTCCACCAGCCTTTCGGTTCCTG...GGCTGCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGTCGTCCACCGGCGGGTaGAGGATGGAGATACACACG +
Preference number: 4 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLSSTGG*RMEIHT
Trigger: CGTGTGTATCTCCATCCTCCACCCGCCGGTGGACGA...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLTLCWT*LQDLEL
Trigger: CAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGT...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp TCTGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTCCCCAGGACCGGATaGTGTCTGTGTACTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SEPSSGAGALVFTQYSASVPRTG*CLCTPD
Trigger: ATCGGGAGTACACAGACATCATCCGGTCCTGGGGAC...GCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606065.3
CDS-3UTR GCA 90 bp TCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTGGTGGGCACCATGGTCCTGACGTTCTaGGTGGGGTTCCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGAGALVFTQYSASVVGTMVLTF*VGFHLS
Trigger: AGAGAGGTGGAACCCCACGCAGAACGTCAGGACCAT...GGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CACCCTGGGCCCGTCCACCGAGCCCCGAGTGACGTGAGTGGCGGTGGGGCAGCCGAACCGAAAGGCTGGTaGAGAGTATGGGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: HPGPVHRAPSDVSGGGAAEPKGW*RVWVVD
Trigger: ATCGACTACCCATACTCTCCACCAGCCTTTCGGTTC...GGCTGCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGGACGGGCCCAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGAGCCCCGAGTGACGTaGGTGGCGGTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDEPRVT*VAVGQP
Trigger: GGGCTGCCCCACCGCCACTCACGTCACTCGGGGCTC...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACCCACCGAGCCCCGAGTaGCGTGAGTGGCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDPPSPE*REWRWG
Trigger: GCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGG...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGATGGTCCTGACGTTCTaGGTGGGGTTCCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLMVLTF*VGFHLS
Trigger: AGAGAGGTGGAACCCCACGCAGAACGTCAGGACCAT...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACTCCCGAGGGGACAGGTaGGCCGGCCGCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDSRGDR*AGRSHP
Trigger: AGGGTGGGAGCGGCCGGCCCACCTGTCCCCTCGGGA...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp AAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGAGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: KRVGHGESVHSVLDVAPGVVEEV*ALVGRR
Trigger: CCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGAC...TCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp CCGTCCACTCTGTGCTGGACGTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSTLCWTWLQDLELTGRTKSRPR*IRPLCA
Trigger: AGCACAGAGTGGACGGATTCACCGTGGCCGACTCTT...GGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GTGGCTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACAGGCTGGTGGAGAGTATaGGTAGTCGATGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VAPGPGADRQDRAPRTATGWWRV*VVDGEL
Trigger: AAGTTCCCCATCGACTACCCATACTCTCCACCAGCC...TGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TTTATTCTGGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCTCCCGAGGGGACAGGTaGGCCGGCCGCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FILVVSGLLRARVILIVPSRGDR*AGRSHP
Trigger: AGGGTGGGAGCGGCCGGCCCACCTGTCCCCTCGGGA...GGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGACCGGCGGGTGGAGGATaGAGATACACACGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: KRVGHGESVHSVLDVAPGPAGGG*RYTRPP
Trigger: CGGGGGACGTGTGTATCTCCATCCTCCACCCGCCGG...TCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCCCTAGTACTCGGCCAGCGTGGTaGGCACCTTCACGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: QNLREVVCRLRSHGSGPSTRPAW*APSRRH
Trigger: GTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGT...ACTAGGGCCGGACCCGTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGGCAAGTTTATTCTGGTaGTGTCAGGACTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLASLFW*CQDSSV
Trigger: CACGGAGGAGTCCTGACACCACCAGAATAAACTTGC...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp CAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCCCTAGTGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QNLREVVCRLRSHGSGPSGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...ACTAGGGCCGGACCCGTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp TCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGGAGCCCCGAGTGACGTaGGTGGCGGTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SNKPKQGKESATVNPSTLEPRVT*VAVGQP
Trigger: GGGCTGCCCCACCGCCACTCACGTCACTCGGGGCTC...CAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp GAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGGGAGGCGTCCACGTTTaGGGGCGAGAAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: EVVCRLRSHGSGPSEVNSGGVHV*GREGVG
Trigger: CCCAACACCTTCTCGCCCGCAAACGTGGACGCCTCC...CGAGTTTACCTCACTAGGGCCGGACCCGTGGCTCCTTAGACGACAGACTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGCTCCGCGTCCACCTTaGTCCCCAGGACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDAPRPP*SPGPAS
Trigger: GGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGC...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR CCA 90 bp AAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGAAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGT +
Preference number: 4 (lower is better)
Translates to: KRVGHGESVHSVLDVAPGSTRPA*WAPSRR
Trigger: ACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACT...TCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTGGTGTCAGGACCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGG +
Preference number: 4 (lower is better)
Translates to: GSGPSEVNSASLFWWCQDRAPAP*SSRSTR
Trigger: CCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG...GTCCTGACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGCCGTCCACTCTGTGCTaGACGTGGCTCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: EVVCRLRSHGSGPSEVNSPSTLC*TWLQDL
Trigger: CAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGG...CGAGTTTACCTCACTAGGGCCGGACCCGTGGCTCCTTAGACGACAGACTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACCCACCGAGCCCCGAGTaGCGTGAGTGGCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHPPSPE*REWRWG
Trigger: GCCCCACCGCCACTCACGTCACTCGGGGCTCGGTGG...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp AGACGGGGACCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGAGGCGTCCACGTTTaGGGGCGAGAAGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RRGPAQNLREVVCRLRSHGGVHV*GREGVG
Trigger: CCCAACACCTTCTCGCCCGCAAACGTGGACGCCTCC...GTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGGTCCCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp AAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTGGCTCCAGGAAATCCGTCCACTCTGTaGTGGACGTGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KRVGHGESVHSVLDVAPGNPSTL*WTWLQD
Trigger: GTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATT...TCCTGGAGCCACGTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TTTATTCTGGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGT +
Preference number: 4 (lower is better)
Translates to: FILVVSGLLRARVILIVPSTRPA*WAPSRR
Trigger: ACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACT...GGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTGGTGTTCGGACCGCTACACCTaGGCCTCCCAGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHGSGPSEVNSASLFWWCSDRYT*ASQAGS
Trigger: ACTACCAGCCTGGGAGGCCCAGGTGTAGCGGTCCGA...ACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACGTCGTAGAAGAGGTCTaGGCCCTCGTCGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHVVEEV*ALVGRR
Trigger: CCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGAC...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp AGACGGGGACCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RRGPAQNLREVVCRLRSHKSRPR*IRPLCA
Trigger: AGCACAGAGTGGACGGATTCACCGTGGCCGACTCTT...GTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGGTCCCCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACAATCCGTCCACTCTGTaGTGGACGTGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDNPSTL*WTWLQD
Trigger: GTCCTGGAGCCACGTCCAGCACAGAGTGGACGGATT...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp GGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTGGTGTCAGGACAAGAGTCGGCCACGGTaGATCCGTCCACTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GSGPSEVNSASLFWWCQDKSRPR*IRPLCA
Trigger: AGCACAGAGTGGACGGATTCACCGTGGCCGACTCTT...GTCCTGACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACATGGTCCTGACGTTCTaGGTGGGGTTCCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDMVLTF*VGFHLS
Trigger: AGAGAGGTGGAACCCCACGCAGAACGTCAGGACCAT...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR GCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACTTGGTCCCCAGGACCTaGTTCCGGATGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDLVPRT*FRMMSV
Trigger: CACAGACATCATCCGGAAGCAGGTCCTGGGGACCAA...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR GCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGTCAGGACTCCTCCGTaGCAGAGTCATCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDVRTPP*QSHPHR
Trigger: ACGATGAGGATGACTCTGGCACGGAGGAGTCCTGAC...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACGGCCAGTCCGGAAGCTaGGGGACCCCGGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHGQSGS*GTPVEV
Trigger: GACTTCTACCGGGGTCCCCCAGCTTCCGGACTGGCC...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp GTCTGTCGTCTAAGGAGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTAGCACAAAACCTCCGTaGGGTAGTCTGTCGTCTAAG +
Preference number: 4 (lower is better)
Translates to: VCRLRSHGSGPSEVNSASSTKPP*GSLSSK
Trigger: CTTAGACGACAGACTACCTCACGGAGGTTTTGTGCT...ACTTGCCGAGTTTACCTCACTAGGGCCGGACCCGTGGCTCCTTAGACGACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp AGTTTATTCTGGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCCAGGACCTGCGGATaGTGTCTGTGTACTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SLFWWCQDSSVPESSSSSPRTCG*CLCTPD
Trigger: ATCGGGAGTACACAGACATCATCCGCAGGTCCTGGG...GGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586283.6
CDS-3UTR GCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCGACCGGCTCTTCCTaGAGCCCCTTGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHSTGSS*SPLSSS
Trigger: GCTGGAGCTCAAGGGGCTGCAGGAAGAGCCGGTCGA...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR GCA 90 bp TTTATTCTGGTGGTGTCAGGACTCCTCCGTGCCAGAGTCATCCTCATCGTCCCCGTCAGGACTCCTCCGTaGCAGAGTCATCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: FILVVSGLLRARVILIVPVRTPP*QSHPHR
Trigger: ACGATGAGGATGACTCTGGCACGGAGGAGTCCTGAC...GGGGACGATGAGGATGACTCTGGCACGGAGGAGTCCTGACACCACCAGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACGGCTGGTGGAGAGTATaGGTAGTCGATGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDGWWRV*VVDGEL
Trigger: AAGTTCCCCATCGACTACCCATACTCTCCACCAGCC...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGACGGGGACCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGCTGGTGGAGAGTATaGGTAGTCGATGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: RRGPAQNLREVVCRLRSHGWWRV*VVDGEL
Trigger: AAGTTCCCCATCGACTACCCATACTCTCCACCAGCC...GTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGGTCCCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp TCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNKPKQGKESATVNPSTLTLCWT*LQDLEL
Trigger: CAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGT...CAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACCCGTCCACTCTGTGCTaGACGTGGCTCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHPSTLC*TWLQDL
Trigger: CAGGTCCTGGAGCCACGTCCAGCACAGAGTGGACGG...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp AGCCACGGGTCCGGCCCTAGTGAGGTAAACTCGGCAAGTTTATTCTGGTGGTGTCAGGAACCGAAAGGCTaGTGGAGAGTATGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SHGSGPSEVNSASLFWWCQEPKG*WRVWVV
Trigger: GACTACCCATACTCTCCACCAGCCTTTCGGTTCCTG...ACACCACCAGAATAAACTTGCCGAGTTTACCTCACTAGGGCCGGACCCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACACTCTGTGCTGGACGTaGCTCCAGGACCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHTLCWT*LQDLEL
Trigger: CAGCTCCAGGTCCTGGAGCCACGTCCAGCACAGAGT...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR TCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACGGACCTGCTTCCGGATaGTGTCTGTGTACTCCCGAT +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHGPASG*CLCTPD
Trigger: ATCGGGAGTACACAGACATCATCCGGAAGCAGGTCC...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR CCA 90 bp ATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCAGGAACCGAAAGGCTaGTGGAGAGTATGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: ISNKPKQGKESATVNPSTQEPKG*WRVWVV
Trigger: GACTACCCATACTCTCCACCAGCCTTTCGGTTCCTG...AGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CCA 90 bp GATTTCAAACAAACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACGCAAGTTTATTCTGGTaGTGTCAGGACTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DFKQTKAGKRVGHGESVHASLFW*CQDSSV
Trigger: CACGGAGGAGTCCTGACACCACCAGAATAAACTTGC...GTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGTTTGTTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS CCA 90 bp CGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTGGTaGGCACCTTCACGCCGTCACGCTCCGCGTCCACCGGCGGGTGGA +
Preference number: 5 (lower is better)
Translates to: RAPAPWSSRSTRPAW*APSRRHAPRPPAGG
Trigger: TCCACCCGCCGGTGGACGCGGAGCGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607527.5
CDS CCA 90 bp CGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGTCACGCTCCGCGTCCACCGGCGGGT +
Preference number: 5 (lower is better)
Translates to: RRAPAPWSSRSTRPA*WAPSRRHAPRPPAG
Trigger: ACCCGCCGGTGGACGCGGAGCGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607527.5
CDS CCA 90 bp CGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTGGTaGGCACCTTCACGCCGTCACGCTCCGCGTCCACCTTGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RAPAPWSSRSTRPAW*APSRRHAPRPPWSP
Trigger: TGGGGACCAAGGTGGACGCGGAGCGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000593036.4
ENST00000606065.3
ENST00000606400.3
CDS CCA 90 bp CGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGTCACGCTCCGCGTCCACCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: RRAPAPWSSRSTRPA*WAPSRRHAPRPPWS
Trigger: GGACCAAGGTGGACGCGGAGCGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000593036.4
ENST00000606065.3
ENST00000606400.3
CDS CCA 90 bp CAGCGAGGCCCAGGACCGCCAGCTGGCAGGTCCCGAATCAGGCCTTaGCGCCACAGCCTGTGGGGGAGCCCGGCCTACCTGATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QRGPGPPAGRSRIRP*RHSLWGSPAYLMVW
Trigger: CCAGACCATCAGGTAGGCCGGGCTCCCCCACAGGCTGTGGCGCCAAGGCCTGATTCGGGACCTGCCAGCTGGCGGTCCTGGGCCTCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CCA 90 bp CCGCCAGCTGGCAGGTCCCGAATCAGGCCTTGGCGCCACAGCCTGTaGGGGAGCCCGGCCTACCTGATGGTCTGGGTGGATACGGGACGG +
Preference number: 5 (lower is better)
Translates to: PPAGRSRIRPWRHSL*GSPAYLMVWVDTGR
Trigger: CCGTCCCGTATCCACCCAGACCATCAGGTAGGCCGGGCTCCCCCACAGGCTGTGGCGCCAAGGCCTGATTCGGGACCTGCCAGCTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS TCA 90 bp GGTCCTGGTGGGAGTCTGCACCGACACACGGTGCCGCAGGCCCCGTaGAAGCACCTACCGTGCAGGTACAGCGAGGCCCAGGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: GPGGSLHRHTVPQAP*KHLPCRYSEAQDRQ
Trigger: CTGGCGGTCCTGGGCCTCGCTGTACCTGCACGGTAGGTGCTTTCACGGGGCCTGCGGCACCGTGTGTCGGTGCAGACTCCCACCAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS-3UTR CAA 90 bp CTCCAGGACCTGGAGCTGACAGGCAGGACCGGGCCCCTCGGACCGCTACACCTGGCGGGCGAGAAGGTGTaGGGCTCGTTCAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQDLELTGRTGPLGPLHLAGEKV*GSFRRE
Trigger: CTCCCTCCTGAACGAGCCCAACACCTTCTCGCCCGC...CAGGTGTAGCGGTCCGAGGGGCCCGGTCCTGCCTGTCAGCTCCAGGTCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS TCA 90 bp GCTTGTACCTGGGGACGAGGCCCAGGCGGCACACGTGGCACGAGGTaGCCAACCCAGAGACGGCTGGGTAAGGAGAAGGCCCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: ACTWGRGPGGTRGTR*PTQRRLGKEKAPGL
Trigger: CAGTCCTGGGGCCTTCTCCTTACCCAGCCGTCTCTGGGTTGGTCACCTCGTGCCACGTGTGCCGCCTGGGCCTCGTCCCCAGGTACAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CCA 90 bp AGTCGTCGTAGAAGAGGTCTGAGCCCTCGTCGGGCGCCGGCGCCTTaGTCTTCACGCAGTACTCGGCCAGCGTGGTGGGCACCTTCACGC +
Preference number: 5 (lower is better)
Translates to: SRRRRGLSPRRAPAP*SSRSTRPAWWAPSR
Trigger: GCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCTACGACGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000593036.4
ENST00000606065.3
ENST00000606400.3
ENST00000607527.5
CDS-3UTR CAA 90 bp AGAAGAGGTCTGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: RRGLSPRRAPAPWSSRSTSGAGA*VFTQYS
Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...AGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGACCTCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS TCA 90 bp GGTGACCAACCCAGAGACGGCTGGGTAAGGAGAAGGCCCCAGGACTaGGGATGGCGGGACACCTCTAGGTGGTTCCAGACGGTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GDQPRDGWVRRRPQD*GWRDTSRWFQTVGP
Trigger: CGGCCCCACCGTCTGGAACCACCTAGAGGTGTCCCGCCATCCTCAGTCCTGGGGCCTTCTCCTTACCCAGCCGTCTCTGGGTTGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS-3UTR CAA 90 bp TCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTGGTGGGCACCTTAGGGTGCCACATCTaGGTCAGGAACCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SGAGALVFTQYSASVVGTLGCHI*VRNRKA
Trigger: AGCCTTTCGGTTCCTGACCAAGATGTGGCACCCTAA...GGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CAA 90 bp CCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: PAQNLREVVCRLRSHGSGSGAGA*VFTQYS
Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GCCGGACCCGTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CAA 90 bp CCAGCACAAAACCTCCGTGAGGTAGTCTGTCGTCTAAGGAGCCACGGGTCCGGCTCTTCCTGCAGCCCCTaGAGCTCCAGCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PAQNLREVVCRLRSHGSGSSCSP*SSSSSA
Trigger: GGCGCTGCTGCTGGAGCTCAAGGGGCTGCAGGAAGA...GCCGGACCCGTGGCTCCTTAGACGACAGACTACCTCACGGAGGTTTTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215574.9
CDS-3UTR CAA 90 bp TCTGAGCCCTCGTCGGGCGCCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCTTAGGGTGCCACATCTaGGTCAGGAACCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SEPSSGAGALVFTQYSASLGCHI*VRNRKA
Trigger: AGCCTTTCGGTTCCTGACCAAGATGTGGCACCCTAA...GCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CAA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACTCGGGCGCCGGCGCCTaGGTCTTCACGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDSGAGA*VFTQYS
Trigger: CGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGA...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS-3UTR CAA 90 bp ACCAAAGCAGGGAAAAGAGTCGGCCACGGTGAATCCGTCCACTCTGTGCTGGACTTAGGGTGCCACATCTaGGTCAGGAACCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TKAGKRVGHGESVHSVLDLGCHI*VRNRKA
Trigger: AGCCTTTCGGTTCCTGACCAAGATGTGGCACCCTAA...GTCCAGCACAGAGTGGACGGATTCACCGTGGCCGACTCTTTTCCCTGCTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
CDS CCA 72 bp CCAGGACCGCCAGCTGGCAGGTCCCGAATCAGGCCTTaGCGCCACAGCCTGTGGGGGAGCCCGGCCTACCTG +
Preference number: 6 (lower is better)
Translates to: PGPPAGRSRIRP*RHSLWGSPAYL
Trigger: CAGGTAGGCCGGGCTCCCCCACAGGCTGTGGCGCCAAGGCCTGATTCGGGACCTGCCAGCTGGCGGTCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CAA 72 bp CCCAGGACCGCCAGCTGGCAGGTCCCGAATCAGGCCTaGGCGCCACAGCCTGTGGGGGAGCCCGGCCTACCT +
Preference number: 6 (lower is better)
Translates to: PRTASWQVPNQA*APQPVGEPGLP
Trigger: AGGTAGGCCGGGCTCCCCCACAGGCTGTGGCGCCAAGGCCTGATTCGGGACCTGCCAGCTGGCGGTCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CAA 90 bp ACAGCGAGGCCCAGGACCGCCAGCTGGCAGGTCCCGAATCAGGCCTaGGCGCCACAGCCTGTGGGGGAGCCCGGCCTACCTGATGGTCTG +
Preference number: 6 (lower is better)
Translates to: TARPRTASWQVPNQA*APQPVGEPGLPDGL
Trigger: CAGACCATCAGGTAGGCCGGGCTCCCCCACAGGCTGTGGCGCCAAGGCCTGATTCGGGACCTGCCAGCTGGCGGTCCTGGGCCTCGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CCA 72 bp CCGGCGCCTTGGTCTTCACGCAGTACTCGGCCAGCGTaGTGGGCACCTTCACGCCGTCACGCTCCGCGTCCA +
Preference number: 6 (lower is better)
Translates to: PAPWSSRSTRPA*WAPSRRHAPRP
Trigger: TGGACGCGGAGCGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000593036.4
ENST00000606065.3
ENST00000606400.3
ENST00000607527.5
CDS TCA 72 bp GGGAGTCTGCACCGACACACGGTGCCGCAGGCCCCGTaGAAGCACCTACCGTGCAGGTACAGCGAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GSLHRHTVPQAP*KHLPCRYSEAQ
Trigger: CTGGGCCTCGCTGTACCTGCACGGTAGGTGCTTTCACGGGGCCTGCGGCACCGTGTGTCGGTGCAGACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS TCA 72 bp TGGGGACGAGGCCCAGGCGGCACACGTGGCACGAGGTaGCCAACCCAGAGACGGCTGGGTAAGGAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: WGRGPGGTRGTR*PTQRRLGKEKA
Trigger: GGCCTTCTCCTTACCCAGCCGTCTCTGGGTTGGTCACCTCGTGCCACGTGTGCCGCCTGGGCCTCGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS GCA 72 bp CCTGGGGTCCTGGTGGGAGTCTGCACCGACACACGGTaGCGCAGGCCCCGTGAAAGCACCTACCGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: PGVLVGVCTDTR*RRPRESTYRAG
Trigger: ACCTGCACGGTAGGTGCTTTCACGGGGCCTGCGGCACCGTGTGTCGGTGCAGACTCCCACCAGGACCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CCA 72 bp GACACCTCTAGGTGGTTCCAGACGGTGGGGCCGGCCTaGGGTCCTGGTGGGAGTCTGCACCGACACACGGTG +
Preference number: 6 (lower is better)
Translates to: DTSRWFQTVGPA*GPGGSLHRHTV
Trigger: CACCGTGTGTCGGTGCAGACTCCCACCAGGACCCCAGGCCGGCCCCACCGTCTGGAACCACCTAGAGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS GCA 72 bp ACCAGTGTCACGCGGAATCCCTCGACCGGCTCTTCCTaGAGCCCCTTGAGCTCCAGCAGCAGCGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: TSVTRNPSTGSS*SPLSSSSSAFC
Trigger: GCAGAAGGCGCTGCTGCTGGAGCTCAAGGGGCTGCAGGAAGAGCCGGTCGAGGGATTCCGCGTGACACTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215574.9
ENST00000586788.1
CDS TCA 72 bp GTTCTGGGTGGACACAGGGGGTTGGGCCGGCTTACCTaGCGTTCTGCGTGGGGTTCCACCTCTCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: VLGGHRGLGRLT*RSAWGSTSLRA
Trigger: TGCCCTCAGAGAGGTGGAACCCCACGCAGAACGTCAGGTAAGCCGGCCCAACCCCCTGTGTCCACCCAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS TCA 72 bp CCCAGAGACGGCTGGGTAAGGAGAAGGCCCCAGGACTaGGGATGGCGGGACACCTCTAGGTGGTTCCAGACG +
Preference number: 6 (lower is better)
Translates to: PRDGWVRRRPQD*GWRDTSRWFQT
Trigger: CGTCTGGAACCACCTAGAGGTGTCCCGCCATCCTCAGTCCTGGGGCCTTCTCCTTACCCAGCCGTCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586788.1
CDS CAA 72 bp ATCACGGAGGCGTCCACGTTTGCGGGCGAGAAGGTGTaGGGCTCGTTCAGGAGGGAGATCACACTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: ITEASTFAGEKV*GSFRREITLRR
Trigger: TCTCCTGAGTGTGATCTCCCTCCTGAACGAGCCCAACACCTTCTCGCCCGCAAACGTGGACGCCTCCGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
ENST00000606400.3
CDS CAA 90 bp TTCCTGTACATCACGGAGGCGTCCACGTTTGCGGGCGAGAAGGTGTaGGGCTCGTTCAGGAGGGAGATCACACTCAGGAGAATGGTCCTG +
Preference number: 6 (lower is better)
Translates to: FLYITEASTFAGEKV*GSFRREITLRRMVL
Trigger: CAGGACCATTCTCCTGAGTGTGATCTCCCTCCTGAACGAGCCCAACACCTTCTCGCCCGCAAACGTGGACGCCTCCGTGATGTACAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000606065.3
ENST00000606400.3
CDS CAA 90 bp GGTCCCCAGGACCGGATGATGTCTGTGTACTCCCGATCCTTCCCCTaGCTCTCTTTCCACTTCCTGTACATCACGGAGGCGTCCACGTTT +
Preference number: 6 (lower is better)
Translates to: GPQDRMMSVYSRSFP*LSFHFLYITEASTF
Trigger: AAACGTGGACGCCTCCGTGATGTACAGGAAGTGGAAAGAGAGCAAGGGGAAGGATCGGGAGTACACAGACATCATCCGGTCCTGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606065.3
CDS CCA 72 bp CATCTTGGTCAGGAACCGAAAGGCTGGTGGAGAGTATaGGTAGTCGATGGGGAACTTGAGGCGCGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: HLGQEPKGWWRV*VVDGELEARLE
Trigger: TTCAAGGCGCGCCTCAAGTTCCCCATCGACTACCCATACTCTCCACCAGCCTTTCGGTTCCTGACCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215574.9
ENST00000586283.6
ENST00000586788.1
ENST00000607527.5
CDS CAA 72 bp CTGCGGATGATGTCTGTGTACTCCCGATCCTTCCCCTaGCTCTCTTTCCACTTCCTGTACATCACGGAGGCG +
Preference number: 6 (lower is better)
Translates to: LRMMSVYSRSFP*LSFHFLYITEA
Trigger: CGCCTCCGTGATGTACAGGAAGTGGAAAGAGAGCAAGGGGAAGGATCGGGAGTACACAGACATCATCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586283.6
CDS CAA 72 bp GACCGGATGATGTCTGTGTACTCCCGATCCTTCCCCTaGCTCTCTTTCCACTTCCTGTACATCACGGAGGCG +
Preference number: 6 (lower is better)
Translates to: DRMMSVYSRSFP*LSFHFLYITEA
Trigger: CGCCTCCGTGATGTACAGGAAGTGGAAAGAGAGCAAGGGGAAGGATCGGGAGTACACAGACATCATCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606065.3
CDS CAA 90 bp AGGACCTGCTTCCGGATGATGTCTGTGTACTCCCGATCCTTCCCCTaGCTCTCTTTCCACTTCCTGTACATCACGGAGGCGTCCACGTTT +
Preference number: 6 (lower is better)
Translates to: RTCFRMMSVYSRSFP*LSFHFLYITEASTF
Trigger: AAACGTGGACGCCTCCGTGATGTACAGGAAGTGGAAAGAGAGCAAGGGGAAGGATCGGGAGTACACAGACATCATCCGGAAGCAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215574.9
ENST00000606400.3
CDS CAA 72 bp TTCCGGATGATGTCTGTGTACTCCCGATCCTTCCCCTaGCTCTCTTTCCACTTCCTGTACATCACGGAGGCG +
Preference number: 6 (lower is better)
Translates to: FRMMSVYSRSFP*LSFHFLYITEA
Trigger: CGCCTCCGTGATGTACAGGAAGTGGAAAGAGAGCAAGGGGAAGGATCGGGAGTACACAGACATCATCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215574.9
ENST00000606400.3