Pregenerated sensors for CDC26 (Homo sapiens)
Ensembl gene IDs: ENSG00000176386Ensembl transcript IDs: ENST00000374206.4, ENST00000490408.5
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCAACGAAACTACTGCTAAGCCAACTGGACTACACTTCCCAGACTaGTTGGAGCCTCTCTCTCCGCAGAACCTCGTCTTCCGCGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PNETTAKPTGLHFPD*LEPLSPQNLVFREL Trigger: AAGCTCGCGGAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAGTAGTTTCGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS CCA 90 bp | ACGAAACTACTGCTAAGCCAACTGGACTACACTTCCCAGACTGCTTaGAGCCTCTCTCTCCGCAGAACCTCGTCTTCCGCGAGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TKLLLSQLDYTSQTA*SLSLRRTSSSASFS Trigger: GGAAAAGCTCGCGGAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAGTAGTTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS GCA 90 bp | AAGTATTTACCAAGAAACAAGCCCAGGAGCAGGGAACCACCAGGTTaGCTGGTGAACCAGCCTAGATCAGAAATGGAGCAGGTCAAAACT | + |
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Preference number: 5 (lower is better) Translates to: KYLPRNKPRSREPPG*LVNQPRSEMEQVKT Trigger: AGTTTTGACCTGCTCCATTTCTGATCTAGGCTGGTTCACCAGGCAACCTGGTGGTTCCCTGCTCCTGGGCTTGTTTCTTGGTAAATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490408.5 |
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| CDS CCA 72 bp | CTGCTAAGCCAACTGGACTACACTTCCCAGACTGCTTaGAGCCTCTCTCTCCGCAGAACCTCGTCTTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LLSQLDYTSQTA*SLSLRRTSSSA Trigger: CGCGGAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS CAA 72 bp | ACTGCTAAGCCAACTGGACTACACTTCCCAGACTGCTaGGAGCCTCTCTCTCCGCAGAACCTCGTCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: TAKPTGLHFPDC*EPLSPQNLVFR Trigger: GCGGAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS GCA 72 bp | CCAAGAAACAAGCCCAGGAGCAGGGAACCACCAGGTTaGCTGGTGAACCAGCCTAGATCAGAAATGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PRNKPRSREPPG*LVNQPRSEMEQ Trigger: CTGCTCCATTTCTGATCTAGGCTGGTTCACCAGGCAACCTGGTGGTTCCCTGCTCCTGGGCTTGTTTCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490408.5 |
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| CDS TCA 72 bp | ACAAGCCCAGGAGCAGGGAACCACCAGGTTGCCTGGTaGACCAGCCTAGATCAGAAATGGAGCAGGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TSPGAGNHQVAW*TSLDQKWSRSK Trigger: TTTTGACCTGCTCCATTTCTGATCTAGGCTGGTTCACCAGGCAACCTGGTGGTTCCCTGCTCCTGGGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490408.5 |
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| CDS GCA 72 bp | ACTACTGCTAAGCCAACTGGACTACACTTCCCAGACTaGTTGGAGCCTCTCTCTCCGCAGAACCTCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TTAKPTGLHFPD*LEPLSPQNLVF Trigger: GAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS CAA 90 bp | AACGAAACTACTGCTAAGCCAACTGGACTACACTTCCCAGACTGCTaGGAGCCTCTCTCTCCGCAGAACCTCGTCTTCCGCGAGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NETTAKPTGLHFPDC*EPLSPQNLVFRELF Trigger: GAAAAGCTCGCGGAAGACGAGGTTCTGCGGAGAGAGAGGCTCCAAGCAGTCTGGGAAGTGTAGTCCAGTTGGCTTAGCAGTAGTTTCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374206.4 ENST00000490408.5 |
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| CDS CAA 72 bp | GAGTCACACCAGAACCAAGATTTTAGGCTTCTTTCTTaGGTGGTCCCTTCTGAAATCGACTCTTTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ESHQNQDFRLLS*VVPSEIDSFLN Trigger: ATTCAGAAAAGAGTCGATTTCAGAAGGGACCACCAAAGAAAGAAGCCTAAAATCTTGGTTCTGGTGTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490408.5 |
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