RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC25B (Homo sapiens)

Ensembl gene IDs: ENSG00000101224

Ensembl transcript IDs: ENST00000245960.10, ENST00000340833.4, ENST00000344256.10, ENST00000379598.9, ENST00000439880.6, ENST00000467519.5, ENST00000468979.1, ENST00000480816.5, ENST00000495915.1

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGGGCTGGGGCAGACAGGCAGGACACCCACACCATCTTTCCCATaGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: SGLGQTGRTPTPSFP*TAPEASSRPSARQA
Trigger: GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGGTGTCCTGCCTGTCTGCCCCAGCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 90 bp GCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATGATTCAGGCCTTAACCCTTGCCCTG +
Preference number: 1 (lower is better)
Translates to: ASSEQSGPRVHSSRG*ASSRLMIQALTLAL
Trigger: CAGGGCAAGGGTTAAGGCCTGAATCATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 90 bp TCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCC +
Preference number: 1 (lower is better)
Translates to: SCCRLSCSTKRSHLV*VCKALRIHGHPRPS
Trigger: GGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR GCA 90 bp TGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATaGAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCACCCAT +
Preference number: 1 (lower is better)
Translates to: CRLSCSTKRSHLVWV*KALRIHGHPRPSTH
Trigger: ATGGGTGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 90 bp TATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGC +
Preference number: 1 (lower is better)
Translates to: YIPAAGCHAQQNAPT*FGYARHCASTAIHG
Trigger: GCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 90 bp CACCAGGATATGGAAAATGATGGGATGACACAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACACCCACACCATCTTTCCCATGGACAG +
Preference number: 1 (lower is better)
Translates to: HQDMENDGMTQGNLG*GRQAGHPHHLSHGQ
Trigger: CTGTCCATGGGAAAGATGGTGTGGGTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCATATCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 90 bp ACAGATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTaGGATTCAGAATCCAGAGGGTGCTCAGTCCTTGGTTTAGCTGCT +
Preference number: 1 (lower is better)
Translates to: TDDSAGPSSTALPPS*DSESRGCSVLGLAA
Trigger: AGCAGCTAAACCAAGGACTGAGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 90 bp TTTCTCAACTTGCTCAGTGCTTTATTGAACCAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGA +
Preference number: 1 (lower is better)
Translates to: FLNLLSALLNQGPNR*LSRAFKHSPAPILR
Trigger: TCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAAGTTGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 90 bp ACAGGTAACACTGAAATAGGAAAGAGTAAGAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGGACAGGAAAGGGGAAAAGAGAAAGG +
Preference number: 1 (lower is better)
Translates to: TGNTEIGKSKSFCSG*RCSYGGTGKGKRER
Trigger: CCTTTCTCTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACTCTTTCCTATTTCAGTGTTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR GCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCAGGCCTTAACCCTTaGCCTGGGAGCCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPSGLNP*PGSPQG
Trigger: TCCTTGGGGGCTCCCAGGGCAAGGGTTAAGGCCTGA...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCAAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGG +
Preference number: 2 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPSFCSG*RCSYGG
Trigger: CCCACCATACGAGCACCTCCAGCCTGAACAGAAGCT...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CAA 90 bp TTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATC +
Preference number: 2 (lower is better)
Translates to: FLLQAVMLNKTLPPG*GMQGTAHPRPSTAI
Trigger: GATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGACAGCAGCAAGTTCTaGGCAGTCAGGCCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGADSSKF*AVRPQG
Trigger: ACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR GCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCATGTTCAGGCTGGAGGTaGTCGTATGGTGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: TWFGYARHCASTAIHGHPCSGWR*SYGGTG
Trigger: TCCTGTCCCACCATACGAGCACCTCCAGCCTGAACA...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCAACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: TWFGYARHCASTAIHGHPTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTCAGGCCTTAACCCTTaGCCTGGGAGCCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPSGLNP*PGSPQG
Trigger: TCCTTGGGGGCTCCCAGGGCAAGGGTTAAGGCCTGA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGATPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QQNAPTWFGYARHCASTATNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCACCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCACAGGACACAGGAAGATaGAGGGTTAACCCTAACAAG +
Preference number: 2 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPQDTGR*RVNPNK
Trigger: CTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTG...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR GCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGGGTATGCAAGGCACTaGGCATCCACGGCCATCCAC +
Preference number: 2 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNGYARH*ASTAIH
Trigger: GTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCTGGAGGTGCTCGTATaGTGGGACAGGAAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGALEVLV*WDRKGE
Trigger: TTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGC +
Preference number: 2 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNRSHLV*VCKALR
Trigger: GCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCG...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGACCGAGTGGGTAACTaGTATTTGACAGGGGAACCT +
Preference number: 2 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSDRVGN*YLTGEP
Trigger: AGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCAGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 2 (lower is better)
Translates to: TWFGYARHCASTAIHGHPETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGAGGTGCTCGTATGGTaGGACAGGAAAGGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVEVLVW*DRKGEK
Trigger: CTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTC...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 2 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGG +
Preference number: 2 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGSFCSG*RCSYGG
Trigger: CCCACCATACGAGCACCTCCAGCCTGAACAGAAGCT...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 2 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR CCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKTNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR-3UTR TCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGTGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR GCA 72 bp CAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTaGGCATCCACGGCCATCCACGGCCATCCACCCATC +
Preference number: 3 (lower is better)
Translates to: QNAPTWFGYARH*ASTAIHGHPPI
Trigger: GATGGGTGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 72 bp GAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATGATTCAGGCCTTAACC +
Preference number: 3 (lower is better)
Translates to: EQSGPRVHSSRG*ASSRLMIQALT
Trigger: GGTTAAGGCCTGAATCATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 72 bp GCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCACTGCGCATCCACGGCC +
Preference number: 3 (lower is better)
Translates to: AAGCHAQQNAPT*FGYARHCASTA
Trigger: GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 72 bp AGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGCATCCACGGCCATCCA +
Preference number: 3 (lower is better)
Translates to: RLSCSTKRSHLV*VCKALRIHGHP
Trigger: TGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 72 bp TTGCTCAGTGCTTTATTGAACCAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: LLSALLNQGPNR*LSRAFKHSPAP
Trigger: GGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 72 bp GCCCTGGGAGCCCCCAAGGATAATAACATCCCTTTCTaGGGCAACAAAACTGGGACCGAGTGGGTAACTGAT +
Preference number: 3 (lower is better)
Translates to: ALGAPKDNNIPF*GNKTGTEWVTD
Trigger: ATCAGTTACCCACTCGGTCCCAGTTTTGTTGCCCCAGAAAGGGATGTTATTATCCTTGGGGGCTCCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 72 bp TTGACAGGGGAACCTAAACAGTCTACGGAAGTGTCCTaGGATGGGCGTAAAGTCAAACAGACCAAGCACACA +
Preference number: 3 (lower is better)
Translates to: LTGEPKQSTEVS*DGRKVKQTKHT
Trigger: TGTGTGCTTGGTCTGTTTGACTTTACGCCCATCTCAGGACACTTCCGTAGACTGTTTAGGTTCCCCTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 72 bp GGCAACAAAACTGGGACCGAGTGGGTAACTGATATTTaGCAGGGGAACCTAAACAGTCTACGGAAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: GNKTGTEWVTDI*QGNLNSLRKCP
Trigger: AGGACACTTCCGTAGACTGTTTAGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTCCCAGTTTTGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CCA 72 bp ACTGAAATAGGAAAGAGTAAGAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGGACAGGAAAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: TEIGKSKSFCSG*RCSYGGTGKGK
Trigger: TTTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACTCTTTCCTATTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR TCA 72 bp CACACACACAAAGGAGCGTTTCAGGACACAGGAAGATaGAGGGTTAACCCTAACAAGGAAACAAGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: HTHKGAFQDTGR*RVNPNKETRSS
Trigger: GGAGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGGASGG*GCGRAG
Trigger: CCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACC...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGAGGTGGCCCGGACGCTaGGCGCCACCGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLRWPGR*APPHTP
Trigger: AGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCT...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCGAAGCACGGGGCTGTaGCCCAGCAGCCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGRSTGL*PSSLTG
Trigger: GCCGGTGAGGCTGCTGGGCCACAGCCCCGTGCTTCG...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAACTGAGAGCCGAGCCTaGCGCGGGCTCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASTESRA*RGLRLG
Trigger: CCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAACTGAGAGCCGAGCCTaGCGCGGGCTCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLETESRA*RGLRLG
Trigger: CCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGT...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR TCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGCCGCTCCAGCCTCTTaGGGATGGGCCGGATCACGC +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGAAPAS*GWAGSR
Trigger: GCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACGAAGCACGGGGCTGTaGCCCAGCAGCCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRARSTGL*PSSLTG
Trigger: GCCGGTGAGGCTGCTGGGCCACAGCCCCGTGCTTCG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRGVSLS*GRSSLL
Trigger: CAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAG +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRAQAPH*SCSRLQ
Trigger: CTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAG +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGAQAPH*SCSRLQ
Trigger: CTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGCGCCTGGGAGTTGGTaGTGTTCCGAAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRAPGSW*CSEARG
Trigger: GCCCCGTGCTTCGGAACATCACCAACTCCCAGGCGC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGGCTGGGGTAGTCGTTaGCAGCACGGTCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGGWGSR*QHGLVP
Trigger: GGGAACGAGACCGTGCTGTCAACGACTACCCCAGCC...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGCCACCGCACACGCCTaGTGGACTGAGAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEATAHA*WTESRA
Trigger: GGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR GCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCCACCGCACACGCCTaGTGGACTGAGAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAATAHA*WTESRA
Trigger: GGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR GCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRSGGCG*GRAGSL
Trigger: TAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGA...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAGASGG*GCGRAG
Trigger: CCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACC...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQAAGPL*QSMGGA
Trigger: AGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGC...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLAAGPL*QSMGGA
Trigger: AGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGC...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGSSASC*SSGGVT
Trigger: CGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGA...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGCCCCTCACTGGTCCTaGAGCCGGCTACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRAPHWS*SRLQSS
Trigger: GGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTAAACGCCGGCACAGCTaGCTGGGCCGAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAKRRHS*LGRGRQ
Trigger: CTGCCTCCCTCGGCCCAGCCAGCTGTGCCGGCGTTT...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGTCTGCTCCGCCATGTaGGGGTCCATAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLVCSAM*GSIGLG
Trigger: CCCCAGCCCTATGGACCCCCACATGGCGGAGCAGAC...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGQGNLG*GRQAGH
Trigger: GTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTG...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTCTTCCGGTCAGGACTaGGACACATCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGSSGQD*DTSGRG
Trigger: CCCCCGACCTGATGTGTCTCAGTCCTGACCGGAAGA...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGGCTGGGGTAGTCGTTaGCAGCACGGTCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQGWGSR*QHGLVP
Trigger: GGGAACGAGACCGTGCTGTCAACGACTACCCCAGCC...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCCGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPRDRDR*VRRLRL
Trigger: CAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCG...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGCCTGTTCAAACGTCTaGTCCGCCATGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGACSNV*SAMWGS
Trigger: GGACCCCCACATGGCGGAGCAGACGTTTGAACAGGC...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEAAGPL*QSMGGA
Trigger: AGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAATGGGCCGGATCACGCTaGAGGGCATGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEWAGSR*RAWTES
Trigger: GCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCCCA...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTGGGCCGGATCACGCTaGAGGGCATGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPWAGSR*RAWTES
Trigger: GCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCCCA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGSSASC*SSGGVT
Trigger: CGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGA...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRGSSAS*CSSGGV
Trigger: GACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTACCGCACACGCCTGCTaGACTGAGAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAATAHAC*TESRAW
Trigger: CCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGT...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAGGTGGCCCGGACGCTaGGCGCCACCGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSARWPGR*APPHTP
Trigger: AGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGC +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRRSCMV*VRVVTG
Trigger: GCCGGTCACCACCCTCACCCAGACCATGCACGACCT...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCGCCGAGCTGGGTCTCTaGGCAAAGGCTTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPAELGL*AKASLR
Trigger: CCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGC...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGTCGGGGGCCGAGCTaGGTCTCTGGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASGRGPS*VSGQRL
Trigger: AAGCCTTTGCCCAGAGACCCAGCTCGGCCCCCGACC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIGVSLS*GRSSLL
Trigger: CAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCC...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLQGNLG*GRQAGH
Trigger: GTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTG...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGGCCGCTCCAGCCTCTTaGGGATGGGCCGGATCACGC +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRAAPAS*GWAGSR
Trigger: GCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGC...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGGCTGGGGTAGTCGTTaGCAGCACGGTCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEGWGSR*QHGLVP
Trigger: GGGAACGAGACCGTGCTGTCAACGACTACCCCAGCC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCCCAGCTGCGAGTCTTaGGGCGGAAGGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGPSCES*GGRSLA
Trigger: AGCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGG...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAGASGG*GCGRAG
Trigger: CCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACC...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCTGGGCCGGATCACGCTaGAGGGCATGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAWAGSR*RAWTES
Trigger: GCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCCCA...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACGCCTCCGCTTATTCTaGACGGGCGTGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRARLRLF*TGVSLS
Trigger: GGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAASSASC*SSGGVT
Trigger: CGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGA...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPSSASC*SSGGVT
Trigger: CGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAGSSAS*CSSGGV
Trigger: GACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCGCCCCTCACTGGTCCTaGAGCCGGCTACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAAPHWS*SRLQSS
Trigger: GGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGC...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGTCAGGCCTTAACCCTTaGCCTGGGAGCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLSGLNP*PGSPQG
Trigger: TCCTTGGGGGCTCCCAGGGCAAGGGTTAAGGCCTGA...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAAAACGCCGGCACAGCTaGCTGGGCCGAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVKRRHS*LGRGRQ
Trigger: CTGCCTCCCTCGGCCCAGCCAGCTGTGCCGGCGTTT...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCGCCGAGCTGGGTCTCTaGGCAAAGGCTTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAAELGL*AKASLR
Trigger: CCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGC...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGCCGAGCTGGGTCTCTaGGCAAAGGCTTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIAELGL*AKASLR
Trigger: CCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGC...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGGTCGGGGGCCGAGCTaGGTCTCTGGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKGRGPS*VSGQRL
Trigger: AAGCCTTTGCCCAGAGACCCAGCTCGGCCCCCGACC...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTCACGCTGCAGGGCATaGACGGAGAGCGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPSRCRA*TESGRA
Trigger: GGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGTGA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTTCACGCTGCAGGGCATaGACGGAGAGCGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAASRCRA*TESGRA
Trigger: GGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGTGA...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGGCTACAGGGCGCGATaGGGCTCTTCAGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGGYRAR*GSSVGS
Trigger: GCTTCCTACTGAAGAGCCCCATCGCGCCCTGTAGCC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQHSSRG*ASSRLM
Trigger: CATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTG...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRHSSRG*ASSRLM
Trigger: CATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTG...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTCTTCCGGTCAGGACTaGGACACATCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPSSGQD*DTSGRG
Trigger: CCCCCGACCTGATGTGTCTCAGTCCTGACCGGAAGA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGACAGCAGCAAGTTCTaGGCAGTCAGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASDSSKF*AVRPQG
Trigger: ACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTACGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVRDRDR*VRRLRL
Trigger: CAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCG...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCCTGTTCAAACGTCTaGTCCGCCATGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAACSNV*SAMWGS
Trigger: GGACCCCCACATGGCGGAGCAGACGTTTGAACAGGC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCGCCTGTTCAAACGTCTaGTCCGCCATGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPACSNV*SAMWGS
Trigger: GGACCCCCACATGGCGGAGCAGACGTTTGAACAGGC...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTATGGGCCGGATCACGCTaGAGGGCATGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVWAGSR*RAWTES
Trigger: GCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCCCA...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGCGCCTCCGCTTATTCTaGACGGGCGTGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKRLRLF*TGVSLS
Trigger: GGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIGSSAS*CSSGGV
Trigger: GACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACC...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGGTATGCAAGGCACTaGGCATCCACGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAGYARH*ASTAIH
Trigger: GTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGACCGCACACGCCTGCTaGACTGAGAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRTAHAC*TESRAW
Trigger: CCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGGCTGGCTGCCTGGATaGCCTGTTCAAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQGWLPG*PVQTSA
Trigger: AGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCC...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGAGCATGGGTGGAGCTaGGATGTGTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGEHGWS*DVWASM
Trigger: CATGGAAGCCCACACATCCCAGCTCCACCCATGCTC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGGTCGGGGGCCGAGCTaGGTCTCTGGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVGRGPS*VSGQRL
Trigger: AAGCCTTTGCCCAGAGACCCAGCTCGGCCCCCGACC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACG +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRERKSR*HLLYMT
Trigger: CGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCCAATCAGCTCTCGGTaGTCACTGTCCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGPISSR*SLSRRF
Trigger: GAACCTCCTGGACAGTGACCACCGAGAGCTGATTGG...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCTACAGGGCGCGATaGGGCTCTTCAGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASGYRAR*GSSVGS
Trigger: GCTTCCTACTGAAGAGCCCCATCGCGCCCTGTAGCC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAAGGCCTCGTGGTTCATaGGCCGGTAGTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASRPRGS*AGSPGV
Trigger: AACCCCAGGACTACCGGCCCATGAACCACGAGGCCT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGCAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKQGNLG*GRQAGH
Trigger: GTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTG...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRARSHLV*VCKALR
Trigger: GCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCAGCAGGGTCCCTACCTaGCTCTTTGGGGTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPSRVPT*LFGVSL
Trigger: CAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCT...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR TCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATATCTTCCGGTCAGGACTaGGACACATCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPISSGQD*DTSGRG
Trigger: CCCCCGACCTGATGTGTCTCAGTCCTGACCGGAAGA...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGCCGCTCCAGCCTCTTaGGGATGGGCCGGATCACGC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGAAPAS*GWAGSR
Trigger: GCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACCCAGCTGCGAGTCTTaGGGCGGAAGGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAPSCES*GGRSLA
Trigger: AGCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCCTCAGTATCCCCCTCTaGAGGGGTCAGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPLSIPL*RGQREA
Trigger: CGCTTCTCTCTGACCCCTGCAGAGGGGGATACTGAG...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVGSSAS*CSSGGV
Trigger: GACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTGCTGCAGGCTGTCATaGTCAACAAAACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGCCRLS*STKRSH
Trigger: GTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCA...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVRSCMV*VRVVTG
Trigger: GCCGGTCACCACCCTCACCCAGACCATGCACGACCT...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTGGCTGCCTGGATaGCCTGTTCAAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAGWLPG*PVQTSA
Trigger: AGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCCGTCGGGCGCCTaGGAGTTGGTGATGTTCCGA +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSARPSGA*ELVMFR
Trigger: TCGGAACATCACCAACTCCCAGGCGCCCGACGGCCG...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGAGCATGGGTGGAGCTaGGATGTGTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAEHGWS*DVWASM
Trigger: CATGGAAGCCCACACATCCCAGCTCCACCCATGCTC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAHSARA*VELGCV
Trigger: CACACATCCCAGCTCCACCCATGCTCTGGCAGAGTG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACG +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEERKSR*HLLYMT
Trigger: CGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGGVSLS*GRSSLL
Trigger: CAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCCAATCAGCTCTCGGTaGTCACTGTCCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLPISSR*SLSRRF
Trigger: GAACCTCCTGGACAGTGACCACCGAGAGCTGATTGG...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCCAATCAGCTCTCGGTaGTCACTGTCCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGPISSR*SLSRRF
Trigger: GAACCTCCTGGACAGTGACCACCGAGAGCTGATTGG...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGGCTACAGGGCGCGATaGGGCTCTTCAGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKGYRAR*GSSVGS
Trigger: GCTTCCTACTGAAGAGCCCCATCGCGCCCTGTAGCC...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGTNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGLVRCT*GLGAFR
Trigger: ACGGAAAGCACCAAGACCTCAAGTACATCTCACCAG...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGGGCCCACGCTCAGATaGGAATTCACAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGGPTLR*EFTVEN
Trigger: ATTTTCCACTGTGAATTCTCATCTGAGCGTGGGCCC...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTCTTTAGCTCATCCTTaGAGGCCTCGTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGSLAHP*RPRGSW
Trigger: CCATGAACCACGAGGCCTTCAAGGATGAGCTAAAGA...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATACCCAGCTGCGAGTCTTaGGGCGGAAGGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIPSCES*GGRSLA
Trigger: AGCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGG...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLASGGCG*GRAGSL
Trigger: TAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGA...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCCTGTTCAAACGTCTaGTCCGCCATGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVACSNV*SAMWGS
Trigger: GGACCCCCACATGGCGGAGCAGACGTTTGAACAGGC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRNDPAG*LDGLFK
Trigger: TTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATT...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTGTTCAGGCTGGAGGTaGTCGTATGGTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPCSGWR*SYGGTG
Trigger: TCCTGTCCCACCATACGAGCACCTCCAGCCTGAACA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGTCAGGCCTTAACCCTTaGCCTGGGAGCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRSGLNP*PGSPQG
Trigger: TCCTTGGGGGCTCCCAGGGCAAGGGTTAAGGCCTGA...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTAGGTGGCCCGGACGCTaGGCGCCACCGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGARWPGR*APPHTP
Trigger: AGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCT...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS-3UTR CCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTCACCGGCATAGACTaGAAGCGTCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQLTGID*KRLMAN
Trigger: GTTTGCCATCAGACGCTTCCAGTCTATGCCGGTGAG...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCACGGCCGTCGGGCGCCTaGGAGTTGGTGATGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPRPSGA*ELVMFR
Trigger: TCGGAACATCACCAACTCCCAGGCGCCCGACGGCCG...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATACACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIHSARA*VELGCV
Trigger: CACACATCCCAGCTCCACCCATGCTCTGGCAGAGTG...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGCCGAGCTGGGTCTCTaGGCAAAGGCTTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGAELGL*AKASLR
Trigger: CCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAACCAATCAGCTCTCGGTaGTCACTGTCCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEPISSR*SLSRRF
Trigger: GAACCTCCTGGACAGTGACCACCGAGAGCTGATTGG...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCACCAATCAGCTCTCGGTaGTCACTGTCCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASPISSR*SLSRRF
Trigger: GAACCTCCTGGACAGTGACCACCGAGAGCTGATTGG...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGAGAAAGGGGCAACATaGCAGACATACCACGGTTCC +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLEKGAT*QTYHGS
Trigger: GGAACCGTGGTATGTCTGCCATGTTGCCCCTTTCTC...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGAGAAAGGGGCAACATaGCAGACATACCACGGTTCC +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQEKGAT*QTYHGS
Trigger: GGAACCGTGGTATGTCTGCCATGTTGCCCCTTTCTC...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAACTGGAGGTGCTCGTATaGTGGGACAGGAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLELEVLV*WDRKGE
Trigger: TTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAG...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCCTGGAGGTGCTCGTATaGTGGGACAGGAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPLEVLV*WDRKGE
Trigger: TTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAG...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASSFCSG*RCSYGG
Trigger: CCCACCATACGAGCACCTCCAGCCTGAACAGAAGCT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAAGCAGGGTCCCTACCTaGCTCTTTGGGGTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVSRVPT*LFGVSL
Trigger: CAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCT...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
CDS-3UTR TCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCTCTTCCGGTCAGGACTaGGACACATCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSASSGQD*DTSGRG
Trigger: CCCCCGACCTGATGTGTCTCAGTCCTGACCGGAAGA...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLLVRCT*GLGAFR
Trigger: ACGGAAAGCACCAAGACCTCAAGTACATCTCACCAG...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCTGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCGACAGCAGCAAGTTCTaGGCAGTCAGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSADSSKF*AVRPQG
Trigger: ACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTC...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSGASGG*GCGRAG
Trigger: CCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCATCCATGCAGAGACCTaGATCAGAAGATTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGIHAET*IRRFGG
Trigger: TCCTCCGAATCTTCTGATGCAGGTCTCTGCATGGAT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCATGGGCCGGATCACGCTaGAGGGCATGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPWAGSR*RAWTES
Trigger: GCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCCCA...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACGCCTCCGCTTATTCTaGACGGGCGTGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGRLRLF*TGVSLS
Trigger: GGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCACCTGGTTTGGGTATaGAAGGCACTGCGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAHLVWV*KALRIH
Trigger: GTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTG...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGGCTGGCTGCCTGGATaGCCTGTTCAAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVGWLPG*PVQTSA
Trigger: AGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGATCCGGCTGGCTGCCTaGATGGCCTGTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRIRLAA*MACSNV
Trigger: GACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGAT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGAGCATGGGTGGAGCTaGGATGTGTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVEHGWS*DVWASM
Trigger: CATGGAAGCCCACACATCCCAGCTCCACCCATGCTC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGAGACTCTCCATGCCTaGGGGAACTGCATCATCATC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAETLHA*GNCIII
Trigger: GATGATGATGCAGTTCCCCCAGGCATGGAGAGTCTC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCAAGGTCTTGACCAGTaGGGCACTAATGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLQGLDQ*GTNETL
Trigger: GAGAGTCTCATTAGTGCCCCACTGGTCAAGACCTTG...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAGVSLS*GRSSLL
Trigger: CAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAGGCCTCGTGGTTCATaGGCCGGTAGTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSARPRGS*AGSPGV
Trigger: AACCCCAGGACTACCGGCCCATGAACCACGAGGCCT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGAGGTGCTCGTATGGTaGGACAGGAAAGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAEVLVW*DRKGEK
Trigger: CTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGAGGGTGCTCAGTCCTTaGTTTAGCTGCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLRVLSP*FSCFCD
Trigger: GTCACAGAAGCAGCTAAACCAAGGACTGAGCACCCT...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTGCGCCTGGGAGTTGGTaGTGTTCCGAAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGAAPGSW*CSEARG
Trigger: GCCCCGTGCTTCGGAACATCACCAACTCCCAGGCGC...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCACTTGCTGTACATaGCGAGGTCCTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAGTCCT*RGPFPL
Trigger: AAGAGGAAAAGGACCTCGTCATGTACAGCAAGTGCC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR TCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCACTTGCTGTACATaGCGAGGTCCTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASGTCCT*RGPFPL
Trigger: AAGAGGAAAAGGACCTCGTCATGTACAGCAAGTGCC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR TCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQFSISS*HSDFER
Trigger: CCGCTCAAAATCACTGTGTCACGATGAGATCGAGAA...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCACTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRALVRCT*GLGAFR
Trigger: ACGGAAAGCACCAAGACCTCAAGTACATCTCACCAG...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGGCCCACGCTCAGATaGGAATTCACAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAGPTLR*EFTVEN
Trigger: ATTTTCCACTGTGAATTCTCATCTGAGCGTGGGCCC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAATGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTTGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAAWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: EASSRPSARQAHRAAGFRPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGCAGGACACAGGAAGATaGAGGGTTAACCCTAACAAG +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLQDTGR*RVNPNK
Trigger: CTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTG...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGACCGAGTGGGTAACTaGTATTTGACAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAADRVGN*YLTGEP
Trigger: AGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTC...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTACAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVQGPNR*LSRAFK
Trigger: CTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTG...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGCACTTGCTGTACATaGCGAGGTCCTTTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAGTCCT*RGPLSH
Trigger: GTGACTTAAAGGACCTCGTCATGTACAGCAAGTGCC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379598.9
CDS-3UTR GCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGCCACCGCACACGCCTaGTGGACTGAGAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSATAHA*WTESRA
Trigger: GGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGATCCATGCAGAGACCTaGATCAGAAGATTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLIHAET*IRRFGG
Trigger: TCCTCCGAATCTTCTGATGCAGGTCTCTGCATGGAT...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCATCCATGCAGAGACCTaGATCAGAAGATTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGIHAET*IRRFGG
Trigger: TCCTCCGAATCTTCTGATGCAGGTCTCTGCATGGAT...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGGCCTGTTCAAACGTCTaGTCCGCCATGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLAACSNV*SAMWGS
Trigger: GGACCCCCACATGGCGGAGCAGACGTTTGAACAGGC...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKNDPAG*LDGLFK
Trigger: TTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATT...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTATGTTCAGGCTGGAGGTaGTCGTATGGTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVCSGWR*SYGGTG
Trigger: TCCTGTCCCACCATACGAGCACCTCCAGCCTGAACA...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGATCAGGCCTTAACCCTTaGCCTGGGAGCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGSGLNP*PGSPQG
Trigger: TCCTTGGGGGCTCCCAGGGCAAGGGTTAAGGCCTGA...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGGGTATGCAAGGCACTaGGCATCCACGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGGYARH*ASTAIH
Trigger: GTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCACCTGGTTTGGGTATaGAAGGCACTGCGCATCCAC +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRHLVWV*KALRIH
Trigger: GTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTG...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGCACACATATATTCCTaGTGCAGGCTGTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGAHIYS*CRLSCS
Trigger: TGAGCATGACAGCCTGCAGCAGGAATATATGTGTGC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGCTTCAAGCACAGCCCTaGCCCCATCTTGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKLQAQP*PHLEIQ
Trigger: CTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAG...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTAAACGCCGGCACAGCTaGCTGGGCCGAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAKRRHS*LGRGRQ
Trigger: CTGCCTCCCTCGGCCCAGCCAGCTGTGCCGGCGTTT...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACCCTACCTGACTCTTTaGGGTTTCGCTGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGPYLTL*GFAAEP
Trigger: GGGCTCGGCAGCGAAACCCCAAAGAGTCAGGTAGGG...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000340833.4
CDS-3UTR CCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTC +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGMYLRS*CFPSTV
Trigger: GACAGTAGACGGAAAGCACCAAGACCTCAAGTACAT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAAGGCCTCGTGGTTCATaGGCCGGTAGTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGRPRGS*AGSPGV
Trigger: AACCCCAGGACTACCGGCCCATGAACCACGAGGCCT...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRTNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGAGGTGCTCGTATGGTaGGACAGGAAAGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIEVLVW*DRKGEK
Trigger: CTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTC...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATACAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIQNAPT*FGYARH
Trigger: GTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTG...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAAGGGTGCTCAGTCCTTaGTTTAGCTGCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASRVLSP*FSCFCD
Trigger: GTCACAGAAGCAGCTAAACCAAGGACTGAGCACCCT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGCGCCTGGGAGTTGGTaGTGTTCCGAAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSAPGSW*CSEARG
Trigger: GCCCCGTGCTTCGGAACATCACCAACTCCCAGGCGC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCGCTTCCATGGCATCTTaGAGACAAATCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGASMAS*RQIHHS
Trigger: AGAATGATGGATTTGTCTTCAAGATGCCATGGAAGC...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCGGCACTTGCTGTACATaGCGAGGTCCTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAGTCCT*RGPFPL
Trigger: AAGAGGAAAAGGACCTCGTCATGTACAGCAAGTGCC...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR TCA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCATTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: WTAPEASSRPSARQAHRAFSISS*HSDFER
Trigger: CCGCTCAAAATCACTGTGTCACGATGAGATCGAGAA...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCACACCATCGTTTCTGGTaGGATGTACTTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASHHRFW*DVLEVL
Trigger: CAAGACCTCAAGTACATCTCACCAGAAACGATGGTG...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTGGCTGGGGTAGTCGTTaGCAGCACGGTCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGAGWGSR*QHGLVP
Trigger: GGGAACGAGACCGTGCTGTCAACGACTACCCCAGCC...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCTCTTTAGCTCATCCTTaGAGGCCTCGTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQASLAHP*RPRGSW
Trigger: CCATGAACCACGAGGCCTTCAAGGATGAGCTAAAGA...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGARDRDR*VRRLRL
Trigger: CAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAATCCATGCAGAGACCTaGATCAGAAGATTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASIHAET*IRRFGG
Trigger: TCCTCCGAATCTTCTGATGCAGGTCTCTGCATGGAT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTTGTCTTCCCCAGAGCTaGTGGCAGCTCCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGACLPQS*WQLHCP
Trigger: CGGGCAGTGGAGCTGCCAGCAGCTCTGGGGAAGACA...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTCAGTATCCCCCTCTaGAGGGGTCAGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGLSIPL*RGQREA
Trigger: CGCTTCTCTCTGACCCCTGCAGAGGGGGATACTGAG...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLYLRSW*FPSTVC
Trigger: ACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTA...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCACCTGGTTTGGGTATaGAAGGCACTGCGCATCCAC +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAHLVWV*KALRIH
Trigger: GTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTG...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGCACACATATATTCCTaGTGCAGGCTGTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASAHIYS*CRLSCS
Trigger: TGAGCATGACAGCCTGCAGCAGGAATATATGTGTGC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCAGTCCTTGGTTTAGCTaGTTCTGTGACATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGSPWFS*FCDISS
Trigger: AGAGGAAATGTCACAGAAGCAGCTAAACCAAGGACT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCATCAGAATCCAGAGGGTaGTCAGTCCTTGGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASSESRG*SVLGLA
Trigger: AGCTAAACCAAGGACTGAGCACCCTCTGGATTCTGA...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTACCGCACACGCCTGCTaGACTGAGAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSTAHAC*TESRAW
Trigger: CCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGT...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCAGGCTGGCTGCCTGGATaGCCTGTTCAAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPGWLPG*PVQTSA
Trigger: AGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCC...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCGAAGCACGGGGCTGTaGCCCAGCAGCCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNRSTGL*PSSLTG
Trigger: GCCGGTGAGGCTGCTGGGCCACAGCCCCGTGCTTCG...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACG +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLAERKSR*HLLYMT
Trigger: CGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTC...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSATNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCTGGAGGTGCTCGTATaGTGGGACAGGAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSALEVLV*WDRKGE
Trigger: TTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAG...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAAGGGTGCTCAGTCCTTaGTTTAGCTGCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIRVLSP*FSCFCD
Trigger: GTCACAGAAGCAGCTAAACCAAGGACTGAGCACCCT...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTACCATCCGGCATAGACTaGAAGCGTCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVPSGID*KRLMAN
Trigger: GTTTGCCATCAGACGCTTCCAGTCTATGCCGGATGG...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340833.4
CDS-3UTR TCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGCCGCTCCAGCCTCTTaGGGATGGGCCGGATCACGC +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNAAPAS*GWAGSR
Trigger: GCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCGCCGCTCCAGCCTCTTaGGGATGGGCCGGATCACGC +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIAAPAS*GWAGSR
Trigger: GCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGC...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKFSISS*HSDFER
Trigger: CCGCTCAAAATCACTGTGTCACGATGAGATCGAGAA...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGTATCCACGATGTTGCTaGACTTGCCCGTCAATAGGG +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRYPRCC*TCPSIG
Trigger: CCCTATTGACGGGCAAGTTCAGCAACATCGTGGATA...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGGGCCCACGCTCAGATaGGAATTCACAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVGPTLR*EFTVEN
Trigger: ATTTTCCACTGTGAATTCTCATCTGAGCGTGGGCCC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGTGTGACATTTCCTCTTaGATAGCTCCAAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQCDISS*IAPNPK
Trigger: CTTAGGGTTTGGAGCTATTCAAGAGGAAATGTCACA...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGCAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLAQGPNR*LSRAFK
Trigger: CTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTG...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGCGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGRDRDR*VRRLRL
Trigger: CAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCG...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGAAGPL*QSMGGA
Trigger: AGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGC...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPAAGPL*QSMGGA
Trigger: AGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGC...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCCGCCTCCGCTTATTCTaGACGGGCGTGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSRLRLF*TGVSLS
Trigger: GGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSSSASC*SSGGVT
Trigger: CGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGA...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGGGTATGCAAGGCACTaGGCATCCACGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAGYARH*ASTAIH
Trigger: GTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCTGCTGCAGGCTGTCATaGTCAACAAAACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSACCRLS*STKRSH
Trigger: GTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCA...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCGGCCGTCGGGCGCCTaGGAGTTGGTGATGTTCCGA +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPRPSGA*ELVMFR
Trigger: TCGGAACATCACCAACTCCCAGGCGCCCGACGGCCG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCGGTCGGGGGCCGAGCTaGGTCTCTGGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPGRGPS*VSGQRL
Trigger: AAGCCTTTGCCCAGAGACCCAGCTCGGCCCCCGACC...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTACAAGGTCTTGACCAGTaGGGCACTAATGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVQGLDQ*GTNETL
Trigger: GAGAGTCTCATTAGTGCCCCACTGGTCAAGACCTTG...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPMYLRS*CFPSTV
Trigger: GACAGTAGACGGAAAGCACCAAGACCTCAAGTACAT...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGGCTACAGGGCGCGATaGGGCTCTTCAGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAGYRAR*GSSVGS
Trigger: GCTTCCTACTGAAGAGCCCCATCGCGCCCTGTAGCC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAG +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNAQAPH*SCSRLQ
Trigger: CTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTAATAACATCCCTTTCTaGGGCAACAAAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: TAPEASSRPSARQAHRAANNIPF*GNKTGT
Trigger: GGTCCCAGTTTTGTTGCCCCAGAAAGGGATGTTATT...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTCGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGC +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGARSHLV*VCKALR
Trigger: GCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCG...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAQNAPT*FGYARH
Trigger: GTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTG...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGCGCCTGGGAGTTGGTaGTGTTCCGAAGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNAPGSW*CSEARG
Trigger: GCCCCGTGCTTCGGAACATCACCAACTCCCAGGCGC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCTATCCACGATGTTGCTaGACTTGCCCGTCAATAGGG +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAYPRCC*TCPSIG
Trigger: CCCTATTGACGGGCAAGTTCAGCAACATCGTGGATA...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCGGCTGGGGTAGTCGTTaGCAGCACGGTCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPGWGSR*QHGLVP
Trigger: GGGAACGAGACCGTGCTGTCAACGACTACCCCAGCC...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCATGGGTAACTGATATTTaGCAGGGGAACCTAAACAGT +
Preference number: 4 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASWVTDI*QGNLNS
Trigger: ACTGTTTAGGTTCCCCTGTCAAATATCAGTTACCCA...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGACAGCAGCAAGTTCTaGGCAGTCAGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSDSSKF*AVRPQG
Trigger: ACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATATGCTCAGTGCTTTATTaGACCAAGGCCCTAACAGAT +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPICSVLY*TKALTD
Trigger: ATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCA...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGTGCTCAGTGCTTTATTaGACCAAGGCCCTAACAGAT +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKCSVLY*TKALTD
Trigger: ATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCA...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGATCCATGCAGAGACCTaGATCAGAAGATTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRIHAET*IRRFGG
Trigger: TCCTCCGAATCTTCTGATGCAGGTCTCTGCATGGAT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLANDPAG*LDGLFK
Trigger: TTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATT...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGTGTCTTCCCCAGAGCTaGTGGCAGCTCCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGCLPQS*WQLHCP
Trigger: CGGGCAGTGGAGCTGCCAGCAGCTCTGGGGAAGACA...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPGSSAS*CSSGGV
Trigger: GACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACC...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAYLRSW*FPSTVC
Trigger: ACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTA...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCATTCATAGGGGTATCTaGAGTCTACAATCACAAACT +
Preference number: 4 (lower is better)
Translates to: APEASSRPSARQAHRAAGIHRGI*SLQSQT
Trigger: AGTTTGTGATTGTAGACTGCAGATACCCCTATGAAT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCGCCCCTCACTGGTCCTaGAGCCGGCTACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIAPHWS*SRLQSS
Trigger: GGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGC...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGCCCCTCACTGGTCCTaGAGCCGGCTACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNAPHWS*SRLQSS
Trigger: GGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGGGTATGCAAGGCACTaGGCATCCACGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAGYARH*ASTAIH
Trigger: GTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCACACCTGGTTTGGGTATaGAAGGCACTGCGCATCCAC +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPHLVWV*KALRIH
Trigger: GTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTG...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGATGCTGCAGGCTGTCATaGTCAACAAAACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGCCRLS*STKRSH
Trigger: GTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCA...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATGCTGCAGGCTGTCATaGTCAACAAAACGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPCCRLS*STKRSH
Trigger: GTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCA...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGTCTCAACTTGCTCAGTaGTTTATTGAACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKSQLAQ*FIEPRP
Trigger: GGGCCTTGGTTCAATAAAGCACTGAGCAAGTTGAGA...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGTCTGCTCCGCCATGTaGGGGTCCATAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNVCSAM*GSIGLG
Trigger: CCCCAGCCCTATGGACCCCCACATGGCGGAGCAGAC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGGCTGGCTGCCTGGATaGCCTGTTCAAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAGWLPG*PVQTSA
Trigger: AGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTCACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGAHSARA*VELGCV
Trigger: CACACATCCCAGCTCCACCCATGCTCTGGCAGAGTG...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGAGACTCTCCATGCCTaGGGGAACTGCATCATCATC +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGETLHA*GNCIII
Trigger: GATGATGATGCAGTTCCCCCAGGCATGGAGAGTCTC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTCACGCTGCAGGGCATaGACGGAGAGCGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPSRCRA*TESGRA
Trigger: GGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGTGA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGGCTACAGGGCGCGATaGGGCTCTTCAGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSGYRAR*GSSVGS
Trigger: GCTTCCTACTGAAGAGCCCCATCGCGCCCTGTAGCC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAG +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGAQAPH*SCSRLQ
Trigger: CTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGC...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPQGNLG*GRQAGH
Trigger: GTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 4 (lower is better)
Translates to: SFPWTAPEASSRPSARQAETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCAAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPSFCSG*RCSYGG
Trigger: CCCACCATACGAGCACCTCCAGCCTGAACAGAAGCT...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAHSSRG*ASSRLM
Trigger: CATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTAGCAGGGTCCCTACCTaGCTCTTTGGGGTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGASRVPT*LFGVSL
Trigger: CAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCT...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
CDS-3UTR TCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCTTCCATGGCATCTTaGAGACAAATCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKASMAS*RQIHHS
Trigger: AGAATGATGGATTTGTCTTCAAGATGCCATGGAAGC...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTCTTCCGGTCAGGACTaGGACACATCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPSSGQD*DTSGRG
Trigger: CCCCCGACCTGATGTGTCTCAGTCCTGACCGGAAGA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGGCACTTGCTGTACATaGCGAGGTCCTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGGTCCT*RGPFPL
Trigger: AAGAGGAAAAGGACCTCGTCATGTACAGCAAGTGCC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGATCTTTAGCTCATCCTTaGAGGCCTCGTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGSLAHP*RPRGSW
Trigger: CCATGAACCACGAGGCCTTCAAGGATGAGCTAAAGA...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCTTTAGCTCATCCTTaGAGGCCTCGTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPSLAHP*RPRGSW
Trigger: CCATGAACCACGAGGCCTTCAAGGATGAGCTAAAGA...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCCCAGCTGCGAGTCTTaGGGCGGAAGGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAPSCES*GGRSLA
Trigger: AGCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGTGGGTAACTGATATTTaGCAGGGGAACCTAAACAGT +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKWVTDI*QGNLNS
Trigger: ACTGTTTAGGTTCCCCTGTCAAATATCAGTTACCCA...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCTGTCTTCCCCAGAGCTaGTGGCAGCTCCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRICLPQS*WQLHCP
Trigger: CGGGCAGTGGAGCTGCCAGCAGCTCTGGGGAAGACA...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTTGTTCAGGCTGGAGGTaGTCGTATGGTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGACSGWR*SYGGTG
Trigger: TCCTGTCCCACCATACGAGCACCTCCAGCCTGAACA...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGAGTCCTTGGTTTAGCTaGTTCTGTGACATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKSPWFS*FCDISS
Trigger: AGAGGAAATGTCACAGAAGCAGCTAAACCAAGGACT...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCTCAGAATCCAGAGGGTaGTCAGTCCTTGGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSASESRG*SVLGLA
Trigger: AGCTAAACCAAGGACTGAGCACCCTCTGGATTCTGA...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGC +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNRSCMV*VRVVTG
Trigger: GCCGGTCACCACCCTCACCCAGACCATGCACGACCT...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCCCTACCTGACTCTTTaGGGTTTCGCTGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPPYLTL*GFAAEP
Trigger: GGGCTCGGCAGCGAAACCCCAAAGAGTCAGGTAGGG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000245960.10
CDS-3UTR CCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTGTCTGCTCCGCCATGTaGGGGTCCATAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGVCSAM*GSIGLG
Trigger: CCCCAGCCCTATGGACCCCCACATGGCGGAGCAGAC...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTATCCGGCTGGCTGCCTaGATGGCCTGTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAIRLAA*MACSNV
Trigger: GACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGAT...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCATCCGGCTGGCTGCCTaGATGGCCTGTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSIRLAA*MACSNV
Trigger: GACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGAT...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGAGCATGGGTGGAGCTaGGATGTGTGGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAEHGWS*DVWASM
Trigger: CATGGAAGCCCACACATCCCAGCTCCACCCATGCTC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTCACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSHSARA*VELGCV
Trigger: CACACATCCCAGCTCCACCCATGCTCTGGCAGAGTG...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGCAAGGTCTTGACCAGTaGGGCACTAATGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLAQGLDQ*GTNETL
Trigger: GAGAGTCTCATTAGTGCCCCACTGGTCAAGACCTTG...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTC +
Preference number: 4 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVMYLRS*CFPSTV
Trigger: GACAGTAGACGGAAAGCACCAAGACCTCAAGTACAT...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGCCTCGTGGTTCATaGGCCGGTAGTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPRPRGS*AGSPGV
Trigger: AACCCCAGGACTACCGGCCCATGAACCACGAGGCCT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCGCTCCCACCTGGTTTaGGTATGCAAGGCACTGCGC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPRSHLV*VCKALR
Trigger: GCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
3UTR CAA 72 bp CAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCGCATCCACGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QAVMLNKTLPPG*GMQGTAHPRPS
Trigger: GGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAAGCAGGGTCCCTACCTaGCTCTTTGGGGTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVSRVPT*LFGVSL
Trigger: CAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCT...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCACTGCTCGTTTCGAATaGTCCGGCTGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPTARFE*SGWLPG
Trigger: TCCAGGCAGCCAGCCGGATCATTCGAAACGAGCAGT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACACCATCGTTTCTGGTaGGATGTACTTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGHHRFW*DVLEVL
Trigger: CAAGACCTCAAGTACATCTCACCAGAAACGATGGTG...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCATATCCACGATGTTGCTaGACTTGCCCGTCAATAGGG +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPYPRCC*TCPSIG
Trigger: CCCTATTGACGGGCAAGTTCAGCAACATCGTGGATA...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGCCCAGCTGCGAGTCTTaGGGCGGAAGGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGPSCES*GGRSLA
Trigger: AGCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGG...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGTCTACGGAAGTGTCCTaGGATGGGCGTAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLASTEVS*DGRKVK
Trigger: TTTGACTTTACGCCCATCTCAGGACACTTCCGTAGA...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTCAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSQGPNR*LSRAFK
Trigger: CTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTG...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCAAGGCCCTAACAGATaGCTCAGCAGGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAQGPNR*LSRAFK
Trigger: CTTGAAGGCCCTGCTGAGTCATCTGTTAGGGCCTTG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTCTCACCGGCATAGACTaGAAGCGTCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGALTGID*KRLMAN
Trigger: GTTTGCCATCAGACGCTTCCAGTCTATGCCGGTGAG...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCACAAGGTCTTGACCAGTaGGGCACTAATGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPQGLDQ*GTNETL
Trigger: GAGAGTCTCATTAGTGCCCCACTGGTCAAGACCTTG...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGERKSR*HLLYMT
Trigger: CGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTC...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTTCACGCTGCAGGGCATaGACGGAGAGCGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGSRCRA*TESGRA
Trigger: GGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGTGA...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCAGGCCTCGTGGTTCATaGGCCGGTAGTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIRPRGS*AGSPGV
Trigger: AACCCCAGGACTACCGGCCCATGAACCACGAGGCCT...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTGAGGTGCTCGTATGGTaGGACAGGAAAGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGAEVLVW*DRKGEK
Trigger: CTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTC...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGAGGTGCTCGTATGGTaGGACAGGAAAGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAEVLVW*DRKGEK
Trigger: CTTTTCCCCTTTCCTGTCCCACCATACGAGCACCTC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCCTGGAGGTGCTCGTATaGTGGGACAGGAAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSLEVLV*WDRKGE
Trigger: TTCCCCTTTCCTGTCCCACCATACGAGCACCTCCAG...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAATAACATCCCTTTCTaGGGCAACAAAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSANNIPF*GNKTGT
Trigger: GGTCCCAGTTTTGTTGCCCCAGAAAGGGATGTTATT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTCTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGALVRCT*GLGAFR
Trigger: ACGGAAAGCACCAAGACCTCAAGTACATCTCACCAG...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTGACCGAGTGGGTAACTaGTATTTGACAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGADRVGN*YLTGEP
Trigger: AGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTC...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCTGTGACATTTCCTCTTaGATAGCTCCAAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: PTPSFPWTAPEASSRPSACDISS*IAPNPK
Trigger: CTTAGGGTTTGGAGCTATTCAAGAGGAAATGTCACA...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCTCTCCAGGTGACGTaGAAAGCGTTTTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPSLQVT*KAFFNF
Trigger: GAAGTTGAAAAACGCTTTTCACGTCACCTGGAGAGA...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCTCAGTATCCCCCTCTaGAGGGGTCAGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNLSIPL*RGQREA
Trigger: CGCTTCTCTCTGACCCCTGCAGAGGGGGATACTGAG...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAATTCATAGGGGTATCTaGAGTCTACAATCACAAACT +
Preference number: 4 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIIHRGI*SLQSQT
Trigger: AGTTTGTGATTGTAGACTGCAGATACCCCTATGAAT...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTGTTCAGGCTGGAGGTaGTCGTATGGTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPCSGWR*SYGGTG
Trigger: TCCTGTCCCACCATACGAGCACCTCCAGCCTGAACA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACACATATATTCCTGCTaGAGGCTGTCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGHIYSC*RLSCST
Trigger: TGTTGAGCATGACAGCCTGCAGCAGGAATATATGTG...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGTCTCAACTTGCTCAGTaGTTTATTGAACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLASQLAQ*FIEPRP
Trigger: GGGCCTTGGTTCAATAAAGCACTGAGCAAGTTGAGA...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGGTCTGCTCCGCCATGTaGGGGTCCATAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRVCSAM*GSIGLG
Trigger: CCCCAGCCCTATGGACCCCCACATGGCGGAGCAGAC...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTCTCACCGGCATAGACTaGAAGCGTCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSLTGID*KRLMAN
Trigger: GTTTGCCATCAGACGCTTCCAGTCTATGCCGGTGAG...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCCTCACCGGCATAGACTaGAAGCGTCTGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSLTGID*KRLMAN
Trigger: GTTTGCCATCAGACGCTTCCAGTCTATGCCGGTGAG...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCGAAGCACGGGGCTGTaGCCCAGCAGCCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKRSTGL*PSSLTG
Trigger: GCCGGTGAGGCTGCTGGGCCACAGCCCCGTGCTTCG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGAGACTCTCCATGCCTaGGGGAACTGCATCATCATC +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAETLHA*GNCIII
Trigger: GATGATGATGCAGTTCCCCCAGGCATGGAGAGTCTC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGTNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCGAGAAAGGGGCAACATaGCAGACATACCACGGTTCC +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSEKGAT*QTYHGS
Trigger: GGAACCGTGGTATGTCTGCCATGTTGCCCCTTTCTC...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGAGAAAGGGGCAACATaGCAGACATACCACGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAEKGAT*QTYHGS
Trigger: GGAACCGTGGTATGTCTGCCATGTTGCCCCTTTCTC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGCTTCTGTTCAGGCTaGAGGTGCTCGTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPSFCSG*RCSYGG
Trigger: CCCACCATACGAGCACCTCCAGCCTGAACAGAAGCT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAQNAPT*FGYARH
Trigger: GTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCAGGGTGCTCAGTCCTTaGTTTAGCTGCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTARVLSP*FSCFCD
Trigger: GTCACAGAAGCAGCTAAACCAAGGACTGAGCACCCT...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAFSISS*HSDFER
Trigger: CCGCTCAAAATCACTGTGTCACGATGAGATCGAGAA...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGGGCCCACGCTCAGATaGGAATTCACAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAGPTLR*EFTVEN
Trigger: ATTTTCCACTGTGAATTCTCATCTGAGCGTGGGCCC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTTGGAAAATGATGGGATaGCACAGGGGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSWKMMG*HRGIWA
Trigger: AGCCCAGATTCCCCTGTGTCATCCCATCATTTTCCA...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGATGGGTAACTGATATTTaGCAGGGGAACCTAAACAGT +
Preference number: 4 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGWVTDI*QGNLNS
Trigger: ACTGTTTAGGTTCCCCTGTCAAATATCAGTTACCCA...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGTGTGACATTTCCTCTTaGATAGCTCCAAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: HRAAGFRPRKAREVAGLACDISS*IAPNPK
Trigger: CTTAGGGTTTGGAGCTATTCAAGAGGAAATGTCACA...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPNDPAG*LDGLFK
Trigger: TTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTGTCTTCCCCAGAGCTaGTGGCAGCTCCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRCLPQS*WQLHCP
Trigger: CGGGCAGTGGAGCTGCCAGCAGCTCTGGGGAAGACA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGATTCATAGGGGTATCTaGAGTCTACAATCACAAACT +
Preference number: 4 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRIHRGI*SLQSQT
Trigger: AGTTTGTGATTGTAGACTGCAGATACCCCTATGAAT...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGCACACATATATTCCTaGTGCAGGCTGTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAAHIYS*CRLSCS
Trigger: TGAGCATGACAGCCTGCAGCAGGAATATATGTGTGC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCTTCAAGCACAGCCCTaGCCCCATCTTGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPLQAQP*PHLEIQ
Trigger: CTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCAATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTC +
Preference number: 4 (lower is better)
Translates to: TWFGYARHCASTAIHGHPMYLRS*CFPSTV
Trigger: GACAGTAGACGGAAAGCACCAAGACCTCAAGTACAT...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRITPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATACTAACTCAACAGACTaGGCTCTTCCAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNTNSTD*ALPGVG
Trigger: CCCCACCCCTGGAAGAGCCCAGTCTGTTGAGTTAGT...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAFSISS*HSDFER
Trigger: CCGCTCAAAATCACTGTGTCACGATGAGATCGAGAA...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTATCCACGATGTTGCTaGACTTGCCCGTCAATAGGG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPYPRCC*TCPSIG
Trigger: CCCTATTGACGGGCAAGTTCAGCAACATCGTGGATA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCTCTACGGAAGTGTCCTaGGATGGGCGTAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSSTEVS*DGRKVK
Trigger: TTTGACTTTACGCCCATCTCAGGACACTTCCGTAGA...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTTCTACGGAAGTGTCCTaGGATGGGCGTAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSSTEVS*DGRKVK
Trigger: TTTGACTTTACGCCCATCTCAGGACACTTCCGTAGA...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCTGCTCAGTGCTTTATTaGACCAAGGCCCTAACAGAT +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTACSVLY*TKALTD
Trigger: ATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCA...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTGGTTCTTATTCTTTTTaGGCAGCAAGTCGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAGSYSF*AASRCP
Trigger: CGGACAGCGACTTGCTGCTCAAAAAGAATAAGAACC...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGAYLRSW*FPSTVC
Trigger: ACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTA...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCCACATATATTCCTGCTaGAGGCTGTCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTAHIYSC*RLSCST
Trigger: TGTTGAGCATGACAGCCTGCAGCAGGAATATATGTG...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGCACACATATATTCCTaGTGCAGGCTGTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSAHIYS*CRLSCS
Trigger: TGAGCATGACAGCCTGCAGCAGGAATATATGTGTGC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCTTCAAGCACAGCCCTaGCCCCATCTTGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRILQAQP*PHLEIQ
Trigger: CTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAG...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCTCTCAACTTGCTCAGTaGTTTATTGAACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QQNAPTWFGYARHCASTASQLAQ*FIEPRP
Trigger: GGGCCTTGGTTCAATAAAGCACTGAGCAAGTTGAGA...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAAACAAGAAGCTGTCTGCTCCGCCATGTaGGGGTCCATAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RFRTQEDEGLTLTRKQEAVCSAM*GSIGLG
Trigger: CCCCAGCCCTATGGACCCCCACATGGCGGAGCAGAC...AGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAAACAAGAAGCTGCCGAGCTGGGTCTCTaGGCAAAGGCTTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RFRTQEDEGLTLTRKQEAAELGL*AKASLR
Trigger: CCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGC...AGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRILVRCT*GLGAFR
Trigger: ACGGAAAGCACCAAGACCTCAAGTACATCTCACCAG...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCCACCATCGTTTCTGGTaGGATGTACTTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPHHRFW*DVLEVL
Trigger: CAAGACCTCAAGTACATCTCACCAGAAACGATGGTG...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGCACCATCGTTTCTGGTaGGATGTACTTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGHHRFW*DVLEVL
Trigger: CAAGACCTCAAGTACATCTCACCAGAAACGATGGTG...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCGGGCCCACGCTCAGATaGGAATTCACAGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIGPTLR*EFTVEN
Trigger: ATTTTCCACTGTGAATTCTCATCTGAGCGTGGGCCC...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCTCTTTAGCTCATCCTTaGAGGCCTCGTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRISLAHP*RPRGSW
Trigger: CCATGAACCACGAGGCCTTCAAGGATGAGCTAAAGA...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGCAGGACACAGGAAGATaGAGGGTTAACCCTAACAAG +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGQDTGR*RVNPNK
Trigger: CTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTG...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTACAGGACACAGGAAGATaGAGGGTTAACCCTAACAAG +
Preference number: 4 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVQDTGR*RVNPNK
Trigger: CTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTG...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGACCGAGTGGGTAACTaGTATTTGACAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNDRVGN*YLTGEP
Trigger: AGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCGGTTCTTATTCTTTTTaGGCAGCAAGTCGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPGSYSF*AASRCP
Trigger: CGGACAGCGACTTGCTGCTCAAAAAGAATAAGAACC...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCGCCTCCGCTTATTCTaGACGGGCGTGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKRLRLF*TGVSLS
Trigger: GGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCCAGAGGGTGCTCACATATATTCCTGCTaGAGGCTGTCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: GLQAQPCPHLEIQNPEGAHIYSC*RLSCST
Trigger: TGTTGAGCATGACAGCCTGCAGCAGGAATATATGTG...AGCACCCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTCAGAATCCAGAGGGTaGTCAGTCCTTGGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPSESRG*SVLGLA
Trigger: AGCTAAACCAAGGACTGAGCACCCTCTGGATTCTGA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGATCCGGCTGGCTGCCTaGATGGCCTGTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRIRLAA*MACSNV
Trigger: GACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGAT...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACG +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRERKSR*HLLYMT
Trigger: CGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTC...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCAGGGGAATCTGGGCTaGGGCAGACAGGCAGGACAC +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKQGNLG*GRQAGH
Trigger: GTGTCCTGCCTGTCTGCCCCAGCCCAGATTCCCCTG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGTCTCTCCAGGTGACGTaGAAAGCGTTTTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGSLQVT*KAFFNF
Trigger: GAAGTTGAAAAACGCTTTTCACGTCACCTGGAGAGA...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGCACATATATTCCTGCTaGAGGCTGTCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGHIYSC*RLSCST
Trigger: TGTTGAGCATGACAGCCTGCAGCAGGAATATATGTG...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTCCTTGGTTTAGCTaGTTCTGTGACATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSSPWFS*FCDISS
Trigger: AGAGGAAATGTCACAGAAGCAGCTAAACCAAGGACT...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTATCTCAACTTGCTCAGTaGTTTATTGAACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVSQLAQ*FIEPRP
Trigger: GGGCCTTGGTTCAATAAAGCACTGAGCAAGTTGAGA...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPMYLRS*CFPSTV
Trigger: GACAGTAGACGGAAAGCACCAAGACCTCAAGTACAT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGACACCATCTTTCCCATaGACAGCACCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRTPSFP*TAPEAS
Trigger: GGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGT...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGGAAACAAGAAGCTCCTaGAGGACACAAAATACTGCC +
Preference number: 4 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGETRSS*RTQNTA
Trigger: GGCAGTATTTTGTGTCCTCCAGGAGCTTCTTGTTTC...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAATAACATCCCTTTCTaGGGCAACAAAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPNNIPF*GNKTGT
Trigger: GGTCCCAGTTTTGTTGCCCCAGAAAGGGATGTTATT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCACAGCAGTAGGGGCTaGGCTTCCAGCAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKHSSRG*ASSRLM
Trigger: CATGAGCCTGCTGGAAGCCCAGCCCCTACTGCTGTG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCTGTGACATTTCCTCTTaGATAGCTCCAAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPCDISS*IAPNPK
Trigger: CTTAGGGTTTGGAGCTATTCAAGAGGAAATGTCACA...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAAACAAGAAGCTCTCAGTATCCCCCTCTaGAGGGGTCAGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: RFRTQEDEGLTLTRKQEALSIPL*RGQREA
Trigger: CGCTTCTCTCTGACCCCTGCAGAGGGGGATACTGAG...AGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIYLRSW*FPSTVC
Trigger: ACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTA...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAAGTCCTTGGTTTAGCTaGTTCTGTGACATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVSPWFS*FCDISS
Trigger: AGAGGAAATGTCACAGAAGCAGCTAAACCAAGGACT...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAAACAAGAAGCTCACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: RFRTQEDEGLTLTRKQEAHSARA*VELGCV
Trigger: CACACATCCCAGCTCCACCCATGCTCTGGCAGAGTG...AGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGGAGACTCTCCATGCCTaGGGGAACTGCATCATCATC +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRETLHA*GNCIII
Trigger: GATGATGATGCAGTTCCCCCAGGCATGGAGAGTCTC...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000439880.6
CDS-3UTR TCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTTGCTCAGTGCTTTATTaGACCAAGGCCCTAACAGAT +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGCSVLY*TKALTD
Trigger: ATCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCA...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTGCTTCCATGGCATCTTaGAGACAAATCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGASMAS*RQIHHS
Trigger: AGAATGATGGATTTGTCTTCAAGATGCCATGGAAGC...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGCAGGACACAGGAAGATaGAGGGTTAACCCTAACAAG +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRQDTGR*RVNPNK
Trigger: CTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTG...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKNDPAG*LDGLFK
Trigger: TTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATT...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTCAGAATCCAGAGGGTaGTCAGTCCTTGGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRSESRG*SVLGLA
Trigger: AGCTAAACCAAGGACTGAGCACCCTCTGGATTCTGA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCTTCAAGCACAGCCCTaGCCCCATCTTGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKLQAQP*PHLEIQ
Trigger: CTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCAAAACGCTCCCACCTaGTTTGGGTATGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKQNAPT*FGYARH
Trigger: GTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGGACCGAGTGGGTAACTaGTATTTGACAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKDRVGN*YLTGEP
Trigger: AGGTTCCCCTGTCAAATATCAGTTACCCACTCGGTC...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATCGTTTTTCAACTTCTTaGATTTTTCAGGTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNRFSTS*IFQVPQ
Trigger: TTGCGGAACCTGAAAAATTCAAGAAGTTGAAAAACG...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR GCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRYLRSW*FPSTVC
Trigger: ACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR GCA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCATTCATAGGGGTATCTaGAGTCTACAATCACAAACT +
Preference number: 4 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIIHRGI*SLQSQT
Trigger: AGTTTGTGATTGTAGACTGCAGATACCCCTATGAAT...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAATAACATCCCTTTCTaGGGCAACAAAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRNNIPF*GNKTGT
Trigger: GGTCCCAGTTTTGTTGCCCCAGAAAGGGATGTTATT...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGGCTTCCATGGCATCTTaGAGACAAATCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRASMAS*RQIHHS
Trigger: AGAATGATGGATTTGTCTTCAAGATGCCATGGAAGC...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGAAACAAGAAGCTCACCATCGTTTCTGGTaGGATGTACTTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RFRTQEDEGLTLTRKQEAHHRFW*DVLEVL
Trigger: CAAGACCTCAAGTACATCTCACCAGAAACGATGGTG...AGCTTCTTGTTTCCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGCCAGGATATGGAAAATaGTGGGATGACACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKPGYGK*WDDTGE
Trigger: TTCCCCTGTGTCATCCCATCATTTTCCATATCCTGG...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR TCA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTGGGTAACTGATATTTaGCAGGGGAACCTAAACAGT +
Preference number: 4 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRWVTDI*QGNLNS
Trigger: ACTGTTTAGGTTCCCCTGTCAAATATCAGTTACCCA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS GCA 90 bp TCCGCCGGGCGCAGTAGCGATGCACCGCGTCCCCGCCCGCGTCGCTaGCGGGTCGCCGGAGGCCGCAGCACGGGCAGGTCCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SAGRSSDAPRPRPRR*RVAGGRSTGRSSRP
Trigger: CGGCCTGCTGGACCTGCCCGTGCTGCGGCCTCCGGCGACCCGGCAGCGACGCGGGCGGGGACGCGGTGCATCGCTACTGCGCCCGGCGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS GCA 90 bp GAGGCCCGGGAGGTGGCCCGGACGCTGGGCGCCACCGCACACGCCTaGTGGACTGAGAGCCGAGCCTGGCGCGGGCTCCGGCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: EAREVARTLGATAHA*WTESRAWRGLRLGH
Trigger: GTGCCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCTCCCGGGCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 90 bp ACGCTGGGCGCCACCGCACACGCCTGCTGGACTGAGAGCCGAGCCTaGCGCGGGCTCCGGCTGGGGCACCTCCATCGCGGCGGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: TLGATAHACWTESRA*RGLRLGHLHRGGAG
Trigger: GCCGGCCCCGCCGCGATGGAGGTGCCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGCGCCCAGCGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 90 bp GCCCGGGAGGTGGCCCGGACGCTGGGCGCCACCGCACACGCCTGCTaGACTGAGAGCCGAGCCTGGCGCGGGCTCCGGCTGGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: AREVARTLGATAHAC*TESRAWRGLRLGHL
Trigger: GAGGTGCCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCTCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 90 bp CCGGCTGGGGCACCTCCATCGCGGCGGGGCCGGCAGAAGGCTGGCTaGAGGGCCGGGCGCAGGGCAGCCAACAAACGCCGGCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PAGAPPSRRGRQKAG*RAGRRAANKRRHSW
Trigger: CCAGCTGTGCCGGCGTTTGTTGGCTGCCCTGCGCCCGGCCCTCCAGCCAGCCTTCTGCCGGCCCCGCCGCGATGGAGGTGCCCCAGCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 90 bp GTCAGGCGGCTGCGGCTGCCGAGCCCGGCGAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGCGAGGAAGCGGCCGCCCGCACCGGG +
Preference number: 5 (lower is better)
Translates to: VRRLRLPSPARSCMV*VRVVTGEEAAARTG
Trigger: CCCGGTGCGGGCGGCCGCTTCCTCGCCGGTCACCACCCTCACCCAGACCATGCACGACCTCGCCGGGCTCGGCAGCCGCAGCCGCCTGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439880.6
CDS TCA 90 bp GGTTGGGCAGGCGGTGGGCCAGGATTCGCTCGCTCCAGGCGCCTCTaGCCGCGCAGCCTCCCCGCCTCCGCGACTGGCTGCGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GWAGGGPGFARSRRL*PRSLPASATGCAEQ
Trigger: CTGCTCAGCGCAGCCAGTCGCGGAGGCGGGGAGGCTGCGCGGTCAGAGGCGCCTGGAGCGAGCGAATCCTGGCCCACCGCCTGCCCAACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS CCA 90 bp CTCTTTGGGGTTTCGCTGCCGAGCCCGGCGAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGCGAGGAAGCGGCCGCCCGCACCGGG +
Preference number: 5 (lower is better)
Translates to: LFGVSLPSPARSCMV*VRVVTGEEAAARTG
Trigger: CCCGGTGCGGGCGGCCGCTTCCTCGCCGGTCACCACCCTCACCCAGACCATGCACGACCTCGCCGGGCTCGGCAGCGAAACCCCAAAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000340833.4
CDS GCA 90 bp AAGGCAAGGGAGGTAGCAGGACTGGCGCAGGCCCCTCACTGGTCCTaGAGCCGGCTACAGAGCTCCCGCCGGCTCCGCTCCCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: KAREVAGLAQAPHWS*SRLQSSRRLRSPAQ
Trigger: CTGGGCTGGGGAGCGGAGCCGGCGGGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGCCAGTCCTGCTACCTCCCTTGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS-3UTR CAA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGGCCGCTCCAGCCTCTaGAGGATGGGCCGGATCACG +
Preference number: 5 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLGRSSL*RMGRIT
Trigger: CGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGCC...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGGCCGCTCCAGCCTCTaGAGGATGGGCCGGATCACG +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGGRSSL*RMGRIT
Trigger: CGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGCC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS CCA 90 bp CCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAGAGCTCCCGCCGGCTCCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRKAREVAGLAQAPH*SCSRLQSSRRLRSP
Trigger: TGGGGAGCGGAGCCGGCGGGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CCA 90 bp GGTCGGGGGCCGAGCTGGGTCTCTGGGCAAAGGCTTCCCTGCGGCTaGCCCACTCTGCCAGAGCATGGGTGGAGCTGGGATGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GRGPSWVSGQRLPCG*PTLPEHGWSWDVWA
Trigger: AGCCCACACATCCCAGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGGCCCCCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CCA 90 bp GTCACGCTCCGCCTCCGCTTATTCTGCACGGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTGAGGATGGGCCGGATCACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VTLRLRLFCTGVSLS*GRSSLLRMGRITLQ
Trigger: CTGCAGCGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCGGAGCGTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS-3UTR CAA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAATCGGGCGCCTGGGAGTaGGTGATGTTCCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: PAGPQPGRPIGQLASGLESGAWE*VMFRST
Trigger: CGTGCTTCGGAACATCACCAACTCCCAGGCGCCCGA...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: APEASSRPSARQAHRAAGKSRWH*LYMTRS
Trigger: GGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGGCCGCTCCAGCCTCTaGAGGATGGGCCGGATCACG +
Preference number: 5 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVGRSSL*RMGRIT
Trigger: CGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGCC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCGCCCAGCTGCGAGTCTaGAGGCGGAAGGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGAQLRV*RRKVFS
Trigger: GCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGGC...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCCCAGCTGCGAGTCTaGAGGCGGAAGGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLAQLRV*RRKVFS
Trigger: GCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGGC...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCG +
Preference number: 5 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLTLPPG*GMQGTA
Trigger: CGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGT...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCG +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGTLPPG*GMQGTA
Trigger: CGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGT...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCATCCCTACCTGACTCTTaGGGGTTTCGCTGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: WTAPEASSRPSARQAHRASLPDS*GFRCRA
Trigger: GGCTCGGCAGCGAAACCCCAAAGAGTCAGGTAGGGA...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000340833.4
CDS-3UTR CAA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCTCGGGCGCCTGGGAGTaGGTGATGTTCCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: SFPWTAPEASSRPSARQASGAWE*VMFRST
Trigger: CGTGCTTCGGAACATCACCAACTCCCAGGCGCCCGA...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLKSRWH*LYMTRS
Trigger: GGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTT...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGCCCAGCTGCGAGTCTaGAGGCGGAAGGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEAQLRV*RRKVFS
Trigger: GCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGGC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCAGCCCTGCCCCCATCTaGAGATTCAGAATCCAGAGG +
Preference number: 5 (lower is better)
Translates to: APEASSRPSARQAHRAAGSPAPI*RFRIQR
Trigger: CCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCT...GCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS GCA 90 bp CGGATGCCCGTCGAGACAGGGATAGGTGCGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTACCTGACTCTTTGGGGTTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: RMPVETGIGASGGCG*GRAGSLPDSLGFRC
Trigger: GCAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000340833.4
CDS GCA 90 bp CGGATGCCCGTCGAGACAGGGATAGGTGCGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTACCTGACTCTTTGGGGTTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: RMPVETGIGASGGCG*GRAGSLPDSLGFRW
Trigger: CCAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS-3UTR CAA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEKSRWH*LYMTRS
Trigger: GGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTT...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: EASSRPSARQAHRAAGFRTMLLN*PVNRAT
Trigger: GGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGT...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGTMLLN*PVNRAT
Trigger: GGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGT...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATGAGGATGACTCTCTaGTCCAGGCTACAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPMRMTL*SRLQGA
Trigger: CGCGCCCTGTAGCCTGGACAAGAGAGTCATCCTCAT...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCG +
Preference number: 5 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKTLPPG*GMQGTA
Trigger: CGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGT...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS GCA 90 bp CGAGCTGGGTCTCTGGGCAAAGGCTTCCCTGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCTGGGATGTGTGGGCTTCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: RAGSLGKGFPAAGPL*QSMGGAGMCGLPWH
Trigger: ATGCCATGGAAGCCCACACATCCCAGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS GCA 90 bp CGGATGCCCGTCGAGACAGGGATAGGTGCGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTACCTGACTCTTTGGGGTTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: RMPVETGIGASGGCG*GRAGSLPDSLGFRC
Trigger: ACAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CAA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKKSRWH*LYMTRS
Trigger: GGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTT...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCGTGACACAGTGATTTaGAGCGGAGGACGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: SFPWTAPEASSRPSARQARDTVI*SGGRGL
Trigger: AAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACG...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TAPEASSRPSARQAHRAATMLLN*PVNRAT
Trigger: GGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGT...AGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASTMLLN*PVNRAT
Trigger: GGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGT...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAATGAGGATGACTCTCTaGTCCAGGCTACAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIMRMTL*SRLQGA
Trigger: CGCGCCCTGTAGCCTGGACAAGAGAGTCATCCTCAT...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCATGAGGATGACTCTCTaGTCCAGGCTACAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: SFPWTAPEASSRPSARQAMRMTL*SRLQGA
Trigger: CGCGCCCTGTAGCCTGGACAAGAGAGTCATCCTCAT...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCCCAGCTGCGAGTCTaGAGGCGGAAGGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVAQLRV*RRKVFS
Trigger: GCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGGC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGGCCCAGCTGCGAGTCTaGAGGCGGAAGGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRAQLRV*RRKVFS
Trigger: GCTAAAGACCTTCCGCCTCAAGACTCGCAGCTGGGC...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAAGCCCTGCCCCCATCTaGAGATTCAGAATCCAGAGG +
Preference number: 5 (lower is better)
Translates to: WTAPEASSRPSARQAHRASPAPI*RFRIQR
Trigger: CCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCT...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGAATCCATCATTCTCCTaGTCTTCCCCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EASSRPSARQAHRAAGFRNPSFS*SSPELL
Trigger: CAGCAGCTCTGGGGAAGACAAGGAGAATGATGGATT...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGAATCCATCATTCTCCTaGTCTTCCCCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQHLRPPAGPQPGRPIGQNPSFS*SSPELL
Trigger: CAGCAGCTCTGGGGAAGACAAGGAGAATGATGGATT...CTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGTCCTTTTCCAAGGTCTaGACCAGTGGGGCACTAATG +
Preference number: 5 (lower is better)
Translates to: QHLRPPAGPQPGRPIGQLSFSKV*TSGALM
Trigger: CATTAGTGCCCCACTGGTCAAGACCTTGGAAAAGGA...CAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CAA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGGCTTCCATGGCATCTaGAAGACAAATCCATCCGGC +
Preference number: 5 (lower is better)
Translates to: WTAPEASSRPSARQAHRAGFHGI*KTNPSG
Trigger: GCCGGATGGATTTGTCTTCAAGATGCCATGGAAGCC...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340833.4
CDS GCA 90 bp AGGATTCGGATGCCCGTCGAGACAGGGATAGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGGTCCCTACCTGACTCTTTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: RIRMPVETGIGASGG*GCGRAGSLPDSLGF
Trigger: AAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000467519.5
CDS CCA 90 bp GTGAAGTTCATTAACTCAATCAAGGTCACGCGGTTGGGCAGGCGGTaGGCCAGGATTCGCTCGCTCCAGGCGCCTCTGACCGCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: VKFINSIKVTRLGRR*ARIRSLQAPLTAQP
Trigger: AGGCTGCGCGGTCAGAGGCGCCTGGAGCGAGCGAATCCTGGCCCACCGCCTGCCCAACCGCGTGACCTTGATTGAGTTAATGAACTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS-3UTR CAA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAKSRWH*LYMTRS
Trigger: GGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCATGAGGATGACTCTCTaGTCCAGGCTACAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAMRMTL*SRLQGA
Trigger: CGCGCCCTGTAGCCTGGACAAGAGAGTCATCCTCAT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGTCCCTACCTGACTCTTaGGGGTTTCGCTGTGCATCT +
Preference number: 5 (lower is better)
Translates to: SRPSARQAHRAAGFRPRKSLPDS*GFRCAS
Trigger: AGATGCACAGCGAAACCCCAAAGAGTCAGGTAGGGA...CTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS TCA 90 bp AGGTGCGTCAGGCGGCTGCGGCTGCGGAAGAGCAGGGTCCCTACCTaGCTCTTTGGGGTTTCGCTGTGCATCTCTCCAGGTGACGTGAAA +
Preference number: 5 (lower is better)
Translates to: RCVRRLRLRKSRVPT*LFGVSLCISPGDVK
Trigger: TTTCACGTCACCTGGAGAGATGCACAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS CCA 90 bp CTCTGGGCAAAGGCTTCCCTGCGGCTGGCCCACTCTGCCAGAGCATaGGTGGAGCTGGGATGTGTGGGCTTCCATGGCATCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: LWAKASLRLAHSARA*VELGCVGFHGILKT
Trigger: TGTCTTCAAGATGCCATGGAAGCCCACACATCCCAGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGCAGGGAAGCCTTTGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS-3UTR CAA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAAATCCATCATTCTCCTaGTCTTCCCCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPINPSFS*SSPELL
Trigger: CAGCAGCTCTGGGGAAGACAAGGAGAATGATGGATT...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGGGCTTCCATGGCATCTaGAAGACAAATCCATCATTC +
Preference number: 5 (lower is better)
Translates to: EASSRPSARQAHRAAGFRGFHGI*KTNPSF
Trigger: GAATGATGGATTTGTCTTCAAGATGCCATGGAAGCC...CCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGCCGCTCCAGCCTCTaGAGGATGGGCCGGATCACG +
Preference number: 5 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVGRSSL*RMGRIT
Trigger: CGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGGCC...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGATGTACTTGAGGTCTaGGTGCTTTCCGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: LRPPAGPQPGRPIGQLASDVLEV*VLSVYC
Trigger: ACAGTAGACGGAAAGCACCAAGACCTCAAGTACATC...TGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCTCTGGTGAGATGTACTaGAGGTCTTGGTGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: SFPWTAPEASSRPSARQASGEMY*RSWCFP
Trigger: CGGAAAGCACCAAGACCTCAAGTACATCTCACCAGA...GGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCAACTTATCCACGATGTaGCTGAACTTGCCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGNLSTM*LNLPVN
Trigger: ATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTT...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS CCA 90 bp GGCCGGATCACGCTGCAGGGCATGGACGGAGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACGAGGTCCTTTAAGTCACTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GRITLQGMDGERKSR*HLLYMTRSFKSLSR
Trigger: CCTAGAGAGTGACTTAAAGGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGTGATCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379598.9
CDS-3UTR CAA 90 bp CCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAGGCTTCCATGGCATCTaGAAGACAAATCCATCATTC +
Preference number: 5 (lower is better)
Translates to: PAGPQPGRPIGQLASGLEGFHGI*KTNPSF
Trigger: GAATGATGGATTTGTCTTCAAGATGCCATGGAAGCC...TTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGTCCTTTTCCAAGGTCTaGACCAGTGGGGCACTAATG +
Preference number: 5 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRSFSKV*TSGALM
Trigger: CATTAGTGCCCCACTGGTCAAGACCTTGGAAAAGGA...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CAA 90 bp TCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGATGTACTTGAGGTCTaGGTGCTTTCCGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: SHGQHLRPPAGPQPGRPIDVLEV*VLSVYC
Trigger: ACAGTAGACGGAAAGCACCAAGACCTCAAGTACATC...TATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGTCTGGTGAGATGTACTaGAGGTCTTGGTGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: HLSHGQHLRPPAGPQPGRSGEMY*RSWCFP
Trigger: CGGAAAGCACCAAGACCTCAAGTACATCTCACCAGA...CCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAAACTTATCCACGATGTaGCTGAACTTGCCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: WTAPEASSRPSARQAHRANLSTM*LNLPVN
Trigger: ATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTT...TGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCAAGCCCTGCCCCCATCTaGAGATTCAGAATCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPSPAPI*RFRIQR
Trigger: CCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCT...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCTGGTTCTTATTCTTTTaGAGCAGCAAGTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LSHGQHLRPPAGPQPGRPWFLFF*SSKSLS
Trigger: GGACAGCGACTTGCTGCTCAAAAAGAATAAGAACCA...GGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CAA 90 bp AGGCCTCCAGCAGGCCCTCAGCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCTGCTGGTTTCTCAACTaGCTCAGTGCTTTATTGAAC +
Preference number: 5 (lower is better)
Translates to: RPPAGPQPGRPIGQLASGCWFLN*LSALLN
Trigger: GTTCAATAAAGCACTGAGCAAGTTGAGAAACCAGCA...GCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGCTGAGGGCCTGCTGGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CAA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTATCGGGCGCCTGGGAGTaGGTGATGTTCCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVSGAWE*VMFRST
Trigger: CGTGCTTCGGAACATCACCAACTCCCAGGCGCCCGA...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAAGTTCACCGCAGTCTaGATGTGCCCGCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: PTPSFPWTAPEASSRPSAKFTAV*MCPPSY
Trigger: ATATGAAGGCGGGCACATCAAGACTGCGGTGAACTT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGAATCCATCATTCTCCTaGTCTTCCCCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HRAAGFRPRKAREVAGLANPSFS*SSPELL
Trigger: CAGCAGCTCTGGGGAAGACAAGGAGAATGATGGATT...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCCGTGACACAGTGATTTaGAGCGGAGGACGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSRDTVI*SGGRGL
Trigger: AAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACG...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGAAGTTCACCGCAGTCTaGATGTGCCCGCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: HRAAGFRPRKAREVAGLAKFTAV*MCPPSY
Trigger: ATATGAAGGCGGGCACATCAAGACTGCGGTGAACTT...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGACGCTCCCACCTGGTTaGGGTATGCAAGGCACTGCG +
Preference number: 5 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGTLPPG*GMQGTA
Trigger: CGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGT...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTATGGTTCTTATTCTTTTaGAGCAGCAAGTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVWFLFF*SSKSLS
Trigger: GGACAGCGACTTGCTGCTCAAAAAGAATAAGAACCA...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CAA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCATCCTTTTCCAAGGTCTaGACCAGTGGGGCACTAATG +
Preference number: 5 (lower is better)
Translates to: TWFGYARHCASTAIHGHPSFSKV*TSGALM
Trigger: CATTAGTGCCCCACTGGTCAAGACCTTGGAAAAGGA...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CAA 90 bp CAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGAGATGTACTTGAGGTCTaGGTGCTTTCCGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: QAHRAAGFRPRKAREVAGDVLEV*VLSVYC
Trigger: ACAGTAGACGGAAAGCACCAAGACCTCAAGTACATC...TCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CCCACACCATCTTTCCCATGGACAGCACCTGAGGCCTCCAGCAGGCCCTCAGCCAACTTATCCACGATGTaGCTGAACTTGCCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: PTPSFPWTAPEASSRPSANLSTM*LNLPVN
Trigger: ATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTT...GGCTGAGGGCCTGCTGGAGGCCTCAGGTGCTGTCCATGGGAAAGATGGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAATGAGGATGACTCTCTaGTCCAGGCTACAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVMRMTL*SRLQGA
Trigger: CGCGCCCTGTAGCCTGGACAAGAGAGTCATCCTCAT...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTTCCCTACCTGACTCTTaGGGGTTTCGCTGTGCATCT +
Preference number: 5 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGASLPDS*GFRCAS
Trigger: AGATGCACAGCGAAACCCCAAAGAGTCAGGTAGGGA...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS TCA 90 bp GAAGAGCAGGGTCCCTACCTGACTCTTTGGGGTTTCGCTGGACGCTaGGGCGTGAAGTTCATTAACTCAATCAAGGTCACGCGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: EEQGPYLTLWGFAGR*GVKFINSIKVTRLG
Trigger: GCCCAACCGCGTGACCTTGATTGAGTTAATGAACTTCACGCCTCAGCGTCCAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS CCA 90 bp CCACTCTGCCAGAGCATGGGTGGAGCTGGGATGTGTGGGCTTCCATaGCATCTTGAAGACAAATCCATCCGGCATAGACTGGAAGCGTCT +
Preference number: 5 (lower is better)
Translates to: PLCQSMGGAGMCGLP*HLEDKSIRHRLEAS
Trigger: AGACGCTTCCAGTCTATGCCGGATGGATTTGTCTTCAAGATGCCATGGAAGCCCACACATCCCAGCTCCACCCATGCTCTGGCAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340833.4
CDS-3UTR CAA 90 bp TCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCAGGCTTCCATGGCATCTaGAAGACAAATCCATCATTC +
Preference number: 5 (lower is better)
Translates to: SHLVWVCKALRIHGHPRPGFHGI*KTNPSF
Trigger: GAATGATGGATTTGTCTTCAAGATGCCATGGAAGCC...TGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCGTGACACAGTGATTTaGAGCGGAGGACGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIRDTVI*SGGRGL
Trigger: AAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACG...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: ATRQQQVLSSQAPGFTAVTMLLN*PVNRAT
Trigger: GGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGT...TACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGAGCCCTGCCCCCATCTaGAGATTCAGAATCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGSPAPI*RFRIQR
Trigger: CCTCTGGATTCTGAATCTCAAGATGGGGGCAGGGCT...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCAGGACTGGCGTTGCTCAGTGCTTTATaGAACCAAGGCCCTAACAGA +
Preference number: 5 (lower is better)
Translates to: HRAAGFRPRKAREVAGLALLSAL*NQGPNR
Trigger: TCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAA...CGCCAGTCCTGCTACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GCCCGGCAGGCCCATAGGGCAGCTGGCTTCAGGCCTCGAAAGGCAAGGGAGGTAGCGTTTTTCAACTTCTaGAATTTTTCAGGTTCCGCA +
Preference number: 5 (lower is better)
Translates to: ARQAHRAAGFRPRKAREVAFFNF*NFSGSA
Trigger: TGCGGAACCTGAAAAATTCAAGAAGTTGAAAAACGC...TACCTCCCTTGCCTTTCGAGGCCTGAAGCCAGCTGCCCTATGGGCCTGCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS TCA 90 bp ATCAGCTCTCGGTGGTCACTGTCCAGGAGGTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGGAGGACGCGGGCTTTAGGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ISSRWSLSRRFSISS*HSDFERRTRALGSS
Trigger: TGAGGAACCTAAAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACGATGAGATCGAGAACCTCCTGGACAGTGACCACCGAGAGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS TCA 90 bp GCACTAATGAGACTCTCCATGCCTGGGGGAACTGCATCATCATCCTaGGGCCAGATTAGCAAGGACAGGGTCACAACCCACAGGCATAGG +
Preference number: 5 (lower is better)
Translates to: ALMRLSMPGGTASSS*GQISKDRVTTHRHR
Trigger: CCTATGCCTGTGGGTTGTGACCCTGTCCTTGCTAATCTGGCCTCAGGATGATGATGCAGTTCCCCCAGGCATGGAGAGTCTCATTAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468979.1
CDS-3UTR CAA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTTCCTTTTCCAAGGTCTaGACCAGTGGGGCACTAATG +
Preference number: 5 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSSFSKV*TSGALM
Trigger: CATTAGTGCCCCACTGGTCAAGACCTTGGAAAAGGA...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000439880.6
CDS-3UTR CAA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCGATGTACTTGAGGTCTaGGTGCTTTCCGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: QQNAPTWFGYARHCASTADVLEV*VLSVYC
Trigger: ACAGTAGACGGAAAGCACCAAGACCTCAAGTACATC...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCTCTGGTGAGATGTACTaGAGGTCTTGGTGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: IRNKTAASSEQSGPRVHSSGEMY*RSWCFP
Trigger: CGGAAAGCACCAAGACCTCAAGTACATCTCACCAGA...GCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTCCCTACCTGACTCTTaGGGGTTTCGCTGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRSLPDS*GFRCRA
Trigger: GGCTCGGCAGCGAAACCCCAAAGAGTCAGGTAGGGA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245960.10
CDS-3UTR CAA 90 bp AGTAAGAGCTTCTGTTCAGGCTGGAGGTGCTCGTATGGTGGGACAGGAAAGGGGTCTGGTGAGATGTACTaGAGGTCTTGGTGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: SKSFCSGWRCSYGGTGKGSGEMY*RSWCFP
Trigger: CGGAAAGCACCAAGACCTCAAGTACATCTCACCAGA...CCCCTTTCCTGTCCCACCATACGAGCACCTCCAGCCTGAACAGAAGCTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTAGGGGCTAACTTATCCACGATGTaGCTGAACTTGCCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: RQQQVLSSQAPGFTAVGANLSTM*LNLPVN
Trigger: ATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTT...AGCCCCTACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp AACCTTCCATCCATCCGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAAGTTCACCGCAGTCTaGATGTGCCCGCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: NLPSIRNKTAASSEQSGPKFTAV*MCPPSY
Trigger: ATATGAAGGCGGGCACATCAAGACTGCGGTGAACTT...GGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCGGATGGATGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS CCA 90 bp GTCAATAGGGCCACCATCGTTTCTGGTGAGATGTACTTGAGGTCTTaGTGCTTTCCGTCTACTGTCTGTAGGAGGAAGGCCTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VNRATIVSGEMYLRS*CFPSTVCRRKACFG
Trigger: GCCAAAGCAGGCCTTCCTCCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGTGGCCCTATTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468979.1
ENST00000480816.5
CDS-3UTR CAA 90 bp CGCAACAAGACAGCAGCAAGTTCTGAGCAGTCAGGCCCCAGGGTTCACAGCAGTGGCTTCCATGGCATCTaGAAGACAAATCCATCATTC +
Preference number: 5 (lower is better)
Translates to: RNKTAASSEQSGPRVHSSGFHGI*KTNPSF
Trigger: GAATGATGGATTTGTCTTCAAGATGCCATGGAAGCC...ACTGCTGTGAACCCTGGGGCCTGACTGCTCAGAACTTGCTGCTGTCTTGTTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGCGTGACACAGTGATTTaGAGCGGAGGACGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRRDTVI*SGGRGL
Trigger: AAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACG...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp TCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCAAGTTCACCGCAGTCTaGATGTGCCCGCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: SCSTKRSHLVWVCKALRIKFTAV*MCPPSY
Trigger: ATATGAAGGCGGGCACATCAAGACTGCGGTGAACTT...GATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCATCCACGGCCATCCAGCGTTTTTCAACTTCTaGAATTTTTCAGGTTCCGCA +
Preference number: 5 (lower is better)
Translates to: TWFGYARHCASTAIHGHPAFFNF*NFSGSA
Trigger: TGCGGAACCTGAAAAATTCAAGAAGTTGAAAAACGC...TGGATGGCCGTGGATGGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS-3UTR CAA 90 bp CAACAAAACGCTCCCACCTGGTTTGGGTATGCAAGGCACTGCGCATCCACGGCCTGCTGGTTTCTCAACTaGCTCAGTGCTTTATTGAAC +
Preference number: 5 (lower is better)
Translates to: QQNAPTWFGYARHCASTACWFLN*LSALLN
Trigger: GTTCAATAAAGCACTGAGCAAGTTGAGAAACCAGCA...GGCCGTGGATGCGCAGTGCCTTGCATACCCAAACCAGGTGGGAGCGTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS GCA 90 bp AATAGGGCCACCATCGTTTCTGGTGAGATGTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGTAGGAGGAAGGCCTGCTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: NRATIVSGEMYLRSW*FPSTVCRRKACFGL
Trigger: AAGGCCAAAGCAGGCCTTCCTCCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGTGGCCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468979.1
ENST00000480816.5
CDS-3UTR CAA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATGATGTACTTGAGGTCTaGGTGCTTTCCGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNDVLEV*VLSVYC
Trigger: ACAGTAGACGGAAAGCACCAAGACCTCAAGTACATC...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTAAGTTCACCGCAGTCTaGATGTGCCCGCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGKFTAV*MCPPSY
Trigger: ATATGAAGGCGGGCACATCAAGACTGCGGTGAACTT...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ATGACTCAGCAGGGCCTTCAAGCACAGCCCTGCCCCCATCTTGAGATTCAGAATTTGCTCAGTGCTTTATaGAACCAAGGCCCTAACAGA +
Preference number: 5 (lower is better)
Translates to: MTQQGLQAQPCPHLEIQNLLSAL*NQGPNR
Trigger: TCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAA...ATTCTGAATCTCAAGATGGGGGCAGGGCTGTGCTTGAAGGCCCTGCTGAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp ATATTCCTGCTGCAGGCTGTCATGCTCAACAAAACGCTCCCACCTGGTTTGGGTAACTTATCCACGATGTaGCTGAACTTGCCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: IFLLQAVMLNKTLPPGLGNLSTM*LNLPVN
Trigger: ATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTT...ACCCAAACCAGGTGGGAGCGTTTTGTTGAGCATGACAGCCTGCAGCAGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS TCA 90 bp AGGGGTATCTGCAGTCTACAATCACAAACTTATCCACGATGTTGCTaGACTTGCCCGTCAATAGGGCCACCATCGTTTCTGGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: RGICSLQSQTYPRCC*TCPSIGPPSFLVRC
Trigger: ACATCTCACCAGAAACGATGGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTTTGTGATTGTAGACTGCAGATACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000480816.5
ENST00000495915.1
CDS-3UTR CAA 90 bp CACACAAAGGAGCGTTTCAGGACACAGGAAGATGAAGGGTTAACCCTAACAAGGTTGCTCAGTGCTTTATaGAACCAAGGCCCTAACAGA +
Preference number: 5 (lower is better)
Translates to: HTKERFRTQEDEGLTLTRLLSAL*NQGPNR
Trigger: TCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAA...CCTTGTTAGGGTTAACCCTTCATCTTCCTGTGTCCTGAAACGCTCCTTTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS-3UTR CAA 90 bp GATGGGCGTAAAGTCAAACAGACCAAGCACACAGGTAACACTGAAATAGGAAAGTTGCTCAGTGCTTTATaGAACCAAGGCCCTAACAGA +
Preference number: 5 (lower is better)
Translates to: DGRKVKQTKHTGNTEIGKLLSAL*NQGPNR
Trigger: TCTGTTAGGGCCTTGGTTCAATAAAGCACTGAGCAA...CTTTCCTATTTCAGTGTTACCTGTGTGCTTGGTCTGTTTGACTTTACGCCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
CDS GCA 72 bp CGCAGTAGCGATGCACCGCGTCCCCGCCCGCGTCGCTaGCGGGTCGCCGGAGGCCGCAGCACGGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RSSDAPRPRPRR*RVAGGRSTGRS
Trigger: GGACCTGCCCGTGCTGCGGCCTCCGGCGACCCGGCAGCGACGCGGGCGGGGACGCGGTGCATCGCTACTGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344256.10
ENST00000379598.9
CDS GCA 72 bp GAGGTGGCCCGGACGCTGGGCGCCACCGCACACGCCTaGTGGACTGAGAGCCGAGCCTGGCGCGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: EVARTLGATAHA*WTESRAWRGLR
Trigger: CCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCACCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 72 bp GCCGGGCGCAGGGCAGCCAACAAACGCCGGCACAGCTaGCTGGGCCGAGGGAGGCAGCGGGCGAGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AGRRAANKRRHS*LGRGRQRARGG
Trigger: CCCACCCCTCGCCCGCTGCCTCCCTCGGCCCAGCCAGCTGTGCCGGCGTTTGTTGGCTGCCCTGCGCCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000439880.6
CDS CCA 72 bp GTGGCCCGGACGCTGGGCGCCACCGCACACGCCTGCTaGACTGAGAGCCGAGCCTGGCGCGGGCTCCGGCTG +
Preference number: 6 (lower is better)
Translates to: VARTLGATAHAC*TESRAWRGLRL
Trigger: CAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGCGCCCAGCGTCCGGGCCAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS TCA 72 bp GGCGGTGGGCCAGGATTCGCTCGCTCCAGGCGCCTCTaGCCGCGCAGCCTCCCCGCCTCCGCGACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGPGFARSRRL*PRSLPASATGC
Trigger: GCAGCCAGTCGCGGAGGCGGGGAGGCTGCGCGGTCAGAGGCGCCTGGAGCGAGCGAATCCTGGCCCACCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS CCA 72 bp GCCACCGCACACGCCTGCTGGACTGAGAGCCGAGCCTaGCGCGGGCTCCGGCTGGGGCACCTCCATCGCGGC +
Preference number: 6 (lower is better)
Translates to: ATAHACWTESRA*RGLRLGHLHRG
Trigger: GCCGCGATGGAGGTGCCCCAGCCGGAGCCCGCGCCAGGCTCGGCTCTCAGTCCAGCAGGCGTGTGCGGTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000439880.6
CDS CCA 72 bp CTGCGGCTGCCGAGCCCGGCGAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGCGAGGAAGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: LRLPSPARSCMV*VRVVTGEEAAA
Trigger: GGCGGCCGCTTCCTCGCCGGTCACCACCCTCACCCAGACCATGCACGACCTCGCCGGGCTCGGCAGCCGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439880.6
CDS CCA 72 bp GTTTCGCTGCCGAGCCCGGCGAGGTCGTGCATGGTCTaGGTGAGGGTGGTGACCGGCGAGGAAGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: VSLPSPARSCMV*VRVVTGEEAAA
Trigger: GGCGGCCGCTTCCTCGCCGGTCACCACCCTCACCCAGACCATGCACGACCTCGCCGGGCTCGGCAGCGAAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245960.10
ENST00000340833.4
CDS GCA 72 bp AGGGAGGATTCGGATGCCCGTCGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTGCCGAGCCCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: REDSDARRDRDR*VRRLRLPSPAR
Trigger: CCTCGCCGGGCTCGGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCGAATCCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439880.6
CDS CCA 72 bp CTGCCCGCCTCGCTCTTCCTCCGGCCGTCGGGCGCCTaGGAGTTGGTGATGTTCCGAAGCACGGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LPASLFLRPSGA*ELVMFRSTGLW
Trigger: CCACAGCCCCGTGCTTCGGAACATCACCAACTCCCAGGCGCCCGACGGCCGGAGGAAGAGCGAGGCGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CCA 72 bp GCAAGGGAGGTAGCAGGACTGGCGCAGGCCCCTCACTaGTCCTGCAGCCGGCTACAGAGCTCCCGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: AREVAGLAQAPH*SCSRLQSSRRL
Trigger: GAGCCGGCGGGAGCTCTGTAGCCGGCTGCAGGACCAGTGAGGGGCCTGCGCCAGTCCTGCTACCTCCCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS GCA 72 bp GAGCGGAGGACGCGGGCTTTAGGTTCCTCAGCCTCCTaGTGCTCCTCAGGAGGGGTCACGCTCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: ERRTRALGSSAS*CSSGGVTLRLR
Trigger: GCGGAGGCGGAGCGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACCTAAAGCCCGCGTCCTCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS CCA 72 bp CGCCTCCGCTTATTCTGCACGGGCGTGTCCCTGTCCTaGGGCCGCTCCAGCCTCTTGAGGATGGGCCGGATC +
Preference number: 6 (lower is better)
Translates to: RLRLFCTGVSLS*GRSSLLRMGRI
Trigger: GATCCGGCCCATCCTCAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCCCGTGCAGAATAAGCGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS GCA 72 bp AGGGAGGATTCGGATGCCCGTCGAGACAGGGATAGGTaGGTCAGGCGGCTGCGGCTGCGGAAGAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: REDSDARRDRDR*VRRLRLRKSRV
Trigger: GACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCCGAATCCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000467519.5
CDS GCA 72 bp CGGAGGACGCGGGCTTTAGGTTCCTCAGCCTCCTGCTaGTCCTCAGGAGGGGTCACGCTCCGCCTCCGCTTA +
Preference number: 6 (lower is better)
Translates to: RRTRALGSSASC*SSGGVTLRLRL
Trigger: TAAGCGGAGGCGGAGCGTGACCCCTCCTGAGGAGCAGCAGGAGGCTGAGGAACCTAAAGCCCGCGTCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS CCA 72 bp CCGAGCTGGGTCTCTGGGCAAAGGCTTCCCTGCGGCTaGCCCACTCTGCCAGAGCATGGGTGGAGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: PSWVSGQRLPCG*PTLPEHGWSWD
Trigger: ATCCCAGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGCAGGGAAGCCTTTGCCCAGAGACCCAGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS GCA 72 bp GTCGAGACAGGGATAGGTGCGTCAGGCGGCTGCGGCTaGGGAAGAGCAGGGTCCCTACCTGACTCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: VETGIGASGGCG*GRAGSLPDSLG
Trigger: CCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000467519.5
CDS GCA 72 bp ATGCCCGTCGAGACAGGGATAGGTGCGTCAGGCGGCTaGGGCTGCGGAAGAGCAGGGTCCCTACCTGACTCT +
Preference number: 6 (lower is better)
Translates to: MPVETGIGASGG*GCGRAGSLPDS
Trigger: AGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000467519.5
CDS GCA 72 bp TCTCTGGGCAAAGGCTTCCCTGCGGCTGGCCCACTCTaGCAGAGCATGGGTGGAGCTGGGATGTGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: SLGKGFPAAGPL*QSMGGAGMCGL
Trigger: AAGCCCACACATCCCAGCTCCACCCATGCTCTGGCAGAGTGGGCCAGCCGCAGGGAAGCCTTTGCCCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CCA 72 bp ATTAACTCAATCAAGGTCACGCGGTTGGGCAGGCGGTaGGCCAGGATTCGCTCGCTCCAGGCGCCTCTGACC +
Preference number: 6 (lower is better)
Translates to: INSIKVTRLGRR*ARIRSLQAPLT
Trigger: GGTCAGAGGCGCCTGGAGCGAGCGAATCCTGGCCCACCGCCTGCCCAACCGCGTGACCTTGATTGAGTTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS CAA 72 bp TGCGGCTGCGGAAGAGCAGGGTCCCTACCTGACTCTTaGGGGTTTCGCTGGACGCTGAGGCGTGAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: CGCGRAGSLPDS*GFRWTLRREVH
Trigger: ATGAACTTCACGCCTCAGCGTCCAGCGAAACCCCAAAGAGTCAGGTAGGGACCCTGCTCTTCCGCAGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS CCA 72 bp GCAAACTGCTCGTTTCGAATGATCCGGCTGGCTGCCTaGATGGCCTGTTCAAACGTCTGCTCCGCCATGTGG +
Preference number: 6 (lower is better)
Translates to: ANCSFRMIRLAA*MACSNVCSAMW
Trigger: CCACATGGCGGAGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATTCGAAACGAGCAGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CCA 72 bp ACGCTGCAGGGCATGGACGGAGAGCGGAAGAGCCGCTaGCACTTGCTGTACATGACGAGGTCCTTTAAGTCA +
Preference number: 6 (lower is better)
Translates to: TLQGMDGERKSR*HLLYMTRSFKS
Trigger: TGACTTAAAGGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTCTCCGTCCATGCCCTGCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379598.9
CDS GCA 72 bp GATGGCAAACTGCTCGTTTCGAATGATCCGGCTGGCTaGCTGGATGGCCTGTTCAAACGTCTGCTCCGCCAT +
Preference number: 6 (lower is better)
Translates to: DGKLLVSNDPAG*LDGLFKRLLRH
Trigger: ATGGCGGAGCAGACGTTTGAACAGGCCATCCAGGCAGCCAGCCGGATCATTCGAAACGAGCAGTTTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS CAA 72 bp CAGGGCATGGACGGAGAGCGGAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCCTTTTCCTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: QGMDGERKSRWH*LYMTRSFSSSF
Trigger: AAAGGAAGAGGAAAAGGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTCTCCGTCCATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS CAA 72 bp CAGGGCATGGACGGAGAGCGGAAGAGCCGCTGGCACTaGCTGTACATGACGAGGTCCTTTAAGTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: QGMDGERKSRWH*LYMTRSFKSLS
Trigger: AGAGAGTGACTTAAAGGACCTCGTCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTCTCCGTCCATGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379598.9
CDS TCA 72 bp CGGTGGTCACTGTCCAGGAGGTTCTCGATCTCATCGTaGCACAGTGATTTTGAGCGGAGGACGCGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: RWSLSRRFSISS*HSDFERRTRAL
Trigger: TAAAGCCCGCGTCCTCCGCTCAAAATCACTGTGTCACGATGAGATCGAGAACCTCCTGGACAGTGACCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
CDS TCA 72 bp AGACTCTCCATGCCTGGGGGAACTGCATCATCATCCTaGGGCCAGATTAGCAAGGACAGGGTCACAACCCAC +
Preference number: 6 (lower is better)
Translates to: RLSMPGGTASSS*GQISKDRVTTH
Trigger: GTGGGTTGTGACCCTGTCCTTGCTAATCTGGCCTCAGGATGATGATGCAGTTCCCCCAGGCATGGAGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468979.1
CDS TCA 72 bp GGTCCCTACCTGACTCTTTGGGGTTTCGCTGGACGCTaGGGCGTGAAGTTCATTAACTCAATCAAGGTCACG +
Preference number: 6 (lower is better)
Translates to: GPYLTLWGFAGR*GVKFINSIKVT
Trigger: CGTGACCTTGATTGAGTTAATGAACTTCACGCCTCAGCGTCCAGCGAAACCCCAAAGAGTCAGGTAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467519.5
CDS GCA 72 bp ACCATCGTTTCTGGTGAGATGTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGTAGGAGGAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: TIVSGEMYLRSW*FPSTVCRRKAC
Trigger: GCAGGCCTTCCTCCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468979.1
ENST00000480816.5
CDS CAA 72 bp GTCAATAGGGCCACCATCGTTTCTGGTGAGATGTACTaGAGGTCTTGGTGCTTTCCGTCTACTGTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: VNRATIVSGEMY*RSWCFPSTVCR
Trigger: CCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGTGGCCCTATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1
CDS TCA 72 bp TCAATAGGGCCACCATCGTTTCTGGTGAGATGTACTTaGGGTCTTGGTGCTTTCCGTCTACTGTCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: SIGPPSFLVRCT*GLGAFRLLSVG
Trigger: TCCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGTGGCCCTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1
CDS GCA 72 bp ACCATCGTTTCTGGTGAGATGTACTTGAGGTCTTGGTaGTTTCCGTCTACTGTCTGTAGGAGGAAGGCCTTA +
Preference number: 6 (lower is better)
Translates to: TIVSGEMYLRSW*FPSTVCRRKAL
Trigger: TAAGGCCTTCCTCCTACAGACAGTAGACGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
CDS TCA 72 bp TGCAGTCTACAATCACAAACTTATCCACGATGTTGCTaGACTTGCCCGTCAATAGGGCCACCATCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: CSLQSQTYPRCC*TCPSIGPPSFL
Trigger: CAGAAACGATGGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTTTGTGATTGTAGACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1
CDS CAA 72 bp TCTACAATCACAAACTTATCCACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACCATCGTTTCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: STITNLSTMLLN*PVNRATIVSGE
Trigger: CTCACCAGAAACGATGGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTTTGTGATTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1
CDS CAA 90 bp TATCTGCAGTCTACAATCACAAACTTATCCACGATGTTGCTGAACTaGCCCGTCAATAGGGCCACCATCGTTTCTGGTGAGATGTACTTG +
Preference number: 6 (lower is better)
Translates to: YLQSTITNLSTMLLN*PVNRATIVSGEMYL
Trigger: CAAGTACATCTCACCAGAAACGATGGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTTTGTGATTGTAGACTGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1
CDS CAA 72 bp TATCTGCAGTCTACAATCACAAACTTATCCACGATGTaGCTGAACTTGCCCGTCAATAGGGCCACCATCGTT +
Preference number: 6 (lower is better)
Translates to: YLQSTITNLSTM*LNLPVNRATIV
Trigger: AACGATGGTGGCCCTATTGACGGGCAAGTTCAGCAACATCGTGGATAAGTTTGTGATTGTAGACTGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245960.10
ENST00000340833.4
ENST00000344256.10
ENST00000379598.9
ENST00000439880.6
ENST00000467519.5
ENST00000468979.1
ENST00000480816.5
ENST00000495915.1