RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC25A (Homo sapiens)

Ensembl gene IDs: ENSG00000164045

Ensembl transcript IDs: ENST00000302506.8, ENST00000351231.7, ENST00000437972.1, ENST00000443342.5, ENST00000459900.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGCGTAGCCAGCAAGATGCCCTGGGCTCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: RGVASKMPWAPTLGV*EVGLRHGSPRPPLQ
Trigger: TTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGGAGCCCAGGGCATCTTGCTGGCTACGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 90 bp TCCCTGGGAAACCTACACTGCAACATTCCAGCACTGAGCCGGGGGTaGCCCAACAGATGCTGCCTCAAGTGCTTTCCTGACTGTGGCTCC +
Preference number: 1 (lower is better)
Translates to: SLGNLHCNIPALSRG*PNRCCLKCFPDCGS
Trigger: GGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGCAGTGTAGGTTTCCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR TCA 90 bp ACTGAGCCGGGGGTGGCCCAACAGATGCTGCCTCAAGTGCTTTCCTaGCTGTGGCTCCTATACCAGCCAATGTCATGGAACTGGGGTGAG +
Preference number: 1 (lower is better)
Translates to: TEPGVAQQMLPQVLS*LWLLYQPMSWNWGE
Trigger: CTCACCCCAGTTCCATGACATTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 90 bp CCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGTaGTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGAC +
Preference number: 1 (lower is better)
Translates to: PRLVHPTVAQSSLTR*SELHCGTVLIWTED
Trigger: GTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 90 bp CACTGCAACATTCCAGCACTGAGCCGGGGGTGGCCCAACAGATGCTaGCTCAAGTGCTTTCCTGACTGTGGCTCCTATACCAGCCAATGT +
Preference number: 1 (lower is better)
Translates to: HCNIPALSRGWPNRC*LKCFPDCGSYTSQC
Trigger: ACATTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 90 bp CTACACTGCAACATTCCAGCACTGAGCCGGGGGTGGCCCAACAGATaGTGCCTCAAGTGCTTTCCTGACTGTGGCTCCTATACCAGCCAA +
Preference number: 1 (lower is better)
Translates to: LHCNIPALSRGWPNR*CLKCFPDCGSYTSQ
Trigger: TTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGCAGTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 90 bp AGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCTaGGCTCCAACCTTGGGAGTGTGGGAGGTAGGTTTAAGGCATGGA +
Preference number: 1 (lower is better)
Translates to: RTSNRDRRGVASKMP*APTLGVWEVGLRHG
Trigger: TCCATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGGAGCCCAGGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 90 bp ATTCCAGCACTGAGCCGGGGGTGGCCCAACAGATGCTGCCTCAAGTaGTTTCCTGACTGTGGCTCCTATACCAGCCAATGTCATGGAACT +
Preference number: 1 (lower is better)
Translates to: IPALSRGWPNRCCLK*FPDCGSYTSQCHGT
Trigger: AGTTCCATGACATTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 90 bp CCCTCTCCAAATGTCACACAGCTGTCCCCTTTGCTTAAGTTTCTCTaGAGCAAAGAGGGTAAAGGGGGATGGAGGGAAGCTTGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: PSPNVTQLSPLLKFL*SKEGKGGWREAWAA
Trigger: AGCAGCCCAAGCTTCCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACAGCTGTGTGACATTTGGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 90 bp CACTGTGGCTCAGAGCAGCTTGACACGGTGCTCAGAACTGCATTGTaGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAA +
Preference number: 1 (lower is better)
Translates to: HCGSEQLDTVLRTAL*HSSDMDGGRLTGTE
Trigger: TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 90 bp GATTATCCCACAAAGACCTTTCCTTCCCAGGTTGTCTTTGCTATTTaGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTC +
Preference number: 1 (lower is better)
Translates to: DYPTKTFPSQVVFAI*PAAFLCNFSTPLRL
Trigger: GAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGGTCTTTGTGGGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAGGAAGCTTGGGCTGCTaGTGGCTGGTCCTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLGSLGC*WLVLPP
Trigger: GGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCTTCC...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHPTLGV*EVGLRH
Trigger: ATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGG...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 90 bp CCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTaGACACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGG +
Preference number: 2 (lower is better)
Translates to: PIRPRLVHPTVAQSS*TRCSELHCGTVLIW
Trigger: CCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTTGGCTCAGAGCAGCTTaGCACGGTGCTCAGAACTGC +
Preference number: 2 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIWLRAA*HGAQNC
Trigger: GCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCA...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTTCTCCTCTCCCCTCATaGGATGGCTGGAGCCCGATA +
Preference number: 2 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEISPLPS*DGWSPI
Trigger: TATCGGGCTCCAGCCATCTCATGAGGGGAGAGGAGA...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGCAACATTCCAGCACTaGGCCGGGGGTGGCCCAACA +
Preference number: 2 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSATFQH*AGGGPT
Trigger: TGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCGGATGGAGGGAAGCTTaGGCTGCTGCTGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSGWREA*AAAGWS
Trigger: GGACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCC...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 90 bp TCCCACTGTGGCTCAGAGCAGCTTGACACGGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACA +
Preference number: 2 (lower is better)
Translates to: SHCGSEQLDTVLRTA*WHSSDMDGGRLTGT
Trigger: TGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAGGAAGCTTGGGCTGCTaGTGGCTGGTCCTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQGSLGC*WLVLPP
Trigger: GGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCTTCC...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCTCTCCCCTCATGAGATaGCTGGAGCCCGATAAGGCC +
Preference number: 2 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSSPLMR*LEPDKA
Trigger: GGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGAGGGTAAAGGGGGATaGAGGGAAGCTTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEEGKGG*REAWAA
Trigger: AGCAGCCCAAGCTTCCCTCCATCCCCCTTTACCCTC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIPTLGV*EVGLRH
Trigger: ATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGAGCAGCTTGACACGGTaGTCAGAACTGCATTGTGGC +
Preference number: 2 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWSSLTR*SELHCG
Trigger: GCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCT...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGAGATGCTGCCTCAAGTaGTTTCCTGACTGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWRCCLK*FPDCGS
Trigger: GGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCT...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCTGGCCCAACAGATGCTaGCTCAAGTGCTTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSWPNRC*LKCFPD
Trigger: GTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCA...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCGGATGGAGGGAAGCTTaGGCTGCTGCTGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFGWREA*AAAGWS
Trigger: GGACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCC...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGGTAGGTTTAAGGCATaGAAGTCCCAGGCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEGRFKA*KSQAPS
Trigger: AGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGATTGTGGCACAGTTCTaGTATGGACGGAGGACGTCT +
Preference number: 2 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWIVAQF*YGRRTS
Trigger: AGACGTCCTCCGTCCATATCAGAACTGTGCCACAAT...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCATTGTGGCACAGTTCTaGTATGGACGGAGGACGTCT +
Preference number: 2 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSIVAQF*YGRRTS
Trigger: AGACGTCCTCCGTCCATATCAGAACTGTGCCACAAT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR TCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCTGGCTCAGAGCAGCTTaGCACGGTGCTCAGAACTGC +
Preference number: 2 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFWLRAA*HGAQNC
Trigger: GCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCA...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTTTGCTTAAGTTTCTCTaGAGCAAAGAGGGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEILLKFL*SKEGKG
Trigger: CCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAA...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTGGTAGGTTTAAGGCATaGAAGTCCCAGGCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTGRFKA*KSQAPS
Trigger: AGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACC...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTCACAGCTGTCCCCTTTaGTTAAGTTTCTCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCHSCPL*LSFSAA
Trigger: TGCTGCAGAGAAACTTAAGCAAAGGGGACAGCTGTG...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTCTCAGAACTGCATTGTaGCACAGTTCTGATATGGAC +
Preference number: 2 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCLRTAL*HSSDMD
Trigger: GTCCATATCAGAACTGTGCCACAATGCAGTTCTGAG...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 90 bp AACATATGGATTATCCCACAAAGACCTTTCCTTCCCAGGTTGTCTTaGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCC +
Preference number: 2 (lower is better)
Translates to: NIWIIPQRPFLPRLS*LFGQQHFCVTSLLP
Trigger: GGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGGTCTTTGTGGGATAATCCATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR GCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAATTGCTTAAGTTTCTCTaGAGCAAAGAGGGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQLLKFL*SKEGKG
Trigger: CCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAA...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 90 bp AAATTAAACATATGGATTATCCCACAAAGACCTTTCCTTCCCAGGTaGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTA +
Preference number: 2 (lower is better)
Translates to: KLNIWIIPQRPFLPR*SLLFGQQHFCVTSL
Trigger: TAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGGTCTTTGTGGGATAATCCATATGTTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp GCCAGCAAGATGCCCTGGGCTCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: ASKMPWAPTLGV*EVGLRHGSPRP
Trigger: GGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGGAGCCCAGGGCATCTTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR TCA 72 bp CCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTaGCACGGTGCTCAGAACTGCATTGTGGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: PGWFIPLWLRAA*HGAQNCIVAQF
Trigger: GAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR TCA 72 bp CTTCCCTGGGAAACCTACACTGCAACATTCCAGCACTaGGCCGGGGGTGGCCCAACAGATGCTGCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: LPWETYTATFQH*AGGGPTDAASS
Trigger: ACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGCAGTGTAGGTTTCCCAGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 72 bp CTGAGCCGGGGGTGGCCCAACAGATGCTGCCTCAAGTaGTTTCCTGACTGTGGCTCCTATACCAGCCAATGT +
Preference number: 3 (lower is better)
Translates to: LSRGWPNRCCLK*FPDCGSYTSQC
Trigger: ACATTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp AACCTACACTGCAACATTCCAGCACTGAGCCGGGGGTaGCCCAACAGATGCTGCCTCAAGTGCTTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: NLHCNIPALSRG*PNRCCLKCFPD
Trigger: GTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGCAGTGTAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR TCA 72 bp GGGGTGGCCCAACAGATGCTGCCTCAAGTGCTTTCCTaGCTGTGGCTCCTATACCAGCCAATGTCATGGAAC +
Preference number: 3 (lower is better)
Translates to: GVAQQMLPQVLS*LWLLYQPMSWN
Trigger: GTTCCATGACATTGGCTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp TCCAACCTTGGGAGTGTGGGAGGTAGGTTTAAGGCATaGAAGTCCCAGGCCCCCTCTCCAAATGTCACACAG +
Preference number: 3 (lower is better)
Translates to: SNLGSVGGRFKA*KSQAPSPNVTQ
Trigger: CTGTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 72 bp ATATCACAGCAACATAAGGAAGATACTCAGTGGACATaGTCCTCCCCCATCCTGTGGAGCCCACCTACCCCC +
Preference number: 3 (lower is better)
Translates to: ISQQHKEDTQWT*SSPILWSPPTP
Trigger: GGGGGTAGGTGGGCTCCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTGGGATGGAGGGAAGCTaGGGCTGCTGCTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTGMEGS*GCCWLV
Trigger: GACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCCC...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCGTGGCTCAGAGCAGCTaGACACGGTGCTCAGAACTG +
Preference number: 3 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSVAQSS*TRCSEL
Trigger: CAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCAC...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCCTTTCCTTCCCAGGTaGTCTTTGCTATTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIPFLPR*SLLFGQ
Trigger: CTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 72 bp AGGCCCCCTCTCCAAATGTCACACAGCTGTCCCCTTTaGTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: RPPLQMSHSCPL*LSFSAAKRVKG
Trigger: CCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACAGCTGTGTGACATTTGGAGAGGGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR GCA 72 bp GTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGTaGTCAGAACTGCATTGTGGCACAGTTCTGATATGG +
Preference number: 3 (lower is better)
Translates to: VHPTVAQSSLTR*SELHCGTVLIW
Trigger: CCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATG +
Preference number: 3 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIVLRTA*WHSSDM
Trigger: CATATCAGAACTGTGCCACAATGCAGTTCTGAGCAC...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp TCAGAGCAGCTTGACACGGTGCTCAGAACTGCATTGTaGCACAGTTCTGATATGGACGGAGGACGTCTAACA +
Preference number: 3 (lower is better)
Translates to: SEQLDTVLRTAL*HSSDMDGGRLT
Trigger: TGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATG +
Preference number: 3 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSVLRTA*WHSSDM
Trigger: CATATCAGAACTGTGCCACAATGCAGTTCTGAGCAC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp CTATCAATATCACAGCAACATAAGGAAGATACTCAGTaGACATGCTCCTCCCCCATCCTGTGGAGCCCACCT +
Preference number: 3 (lower is better)
Translates to: LSISQQHKEDTQ*TCSSPILWSPP
Trigger: AGGTGGGCTCCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATATTGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR-3UTR CAA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCGGTTGTCTTTGCTATTaGGCCAGCAGCATTTCTGTG +
Preference number: 3 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFGCLCY*ASSISV
Trigger: CACAGAAATGCTGCTGGCCAAATAGCAAAGACAACC...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CCA 72 bp ACAAAGACCTTTCCTTCCCAGGTTGTCTTTGCTATTTaGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCC +
Preference number: 3 (lower is better)
Translates to: TKTFPSQVVFAI*PAAFLCNFSTP
Trigger: GGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGGTCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGCACTGAGCCGGGGGTaGCCCAACAGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHALSRG*PNRCCL
Trigger: GAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGTTCTCCCACCCGCTTaGCCAGCTCCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHVLPPA*PAPGSR
Trigger: TCTGCTACCCGGAGCTGGGCAAGCGGGTGGGAGAAC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGTCCAGAGGCTTGCCATaGACGAGGGGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTSRGLP*TRGSPP
Trigger: AGGAGGAGACCCCCTCGTGCATGGCAAGCCTCTGGA...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACAGCTGTCCAGAGGCTTaGCATGCACGAGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHSCPEA*HARGGL
Trigger: GAGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCT...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCTTGCTCTTCTCCCCTaGCCAGGTCCGGCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTLALLP*PGPALG
Trigger: ACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGTCATGGAACTGGGGTaGGGAAGAACAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHVMELG*GRTGPH
Trigger: GTGTGGCCCTGTTCTTCCTCACCCCAGTTCCATGAC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGCGCTCCCTCTTCCTCTaGCTCCGCCGCGACCGCCCC +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWRSLFL*LRRDRP
Trigger: GGGGCGGTCGCGGCGGAGGCAGAGGAAGAGGGAGCG...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACTCACTGCCCAGACCCTaGAGCTGGTCCATAGTGACG +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHSLPRP*SWSIVT
Trigger: CGTCACTATGGACCAGCTGCAGGGTCTGGGCAGTGA...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGGAAGCTTGGGCTGCTaGTGGCTGGTCCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHGSLGC*WLVLPP
Trigger: GGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCTTCC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCCCAGGTCCGGCTCTTaGTGCGGAACTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTPRSGS*CGTSSG
Trigger: ACCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGTCTCCCCTCATGAGATaGCTGGAGCCCGATAAGGCC +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTSPLMR*LEPDKA
Trigger: GGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACCTTCTCTGGATTAGTTaGCTCTTTGGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHLLWIS*LFGAGP
Trigger: GGGGCCAGCCCCAAAGAGTCAACTAATCCAGAGAAG...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGGGTGGCCCAACAGATaGTGCCTCAAGTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHGWPNR*CLKCFP
Trigger: AGGAAAGCACTTGAGGCAGCATCTGTTGGGCCACCC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACAGTGGCTGTCACAGGTaGCTGGGGTGTAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHSGCHR*LGCKKR
Trigger: CCTCTTTTTACACCCCAGTCACCTGTGACAGCCACT...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGGTGGAGACTCCTCTTaGGATCGTTCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHGGDSS*DRSGLF
Trigger: GAAGAGACCAGAACGATCTCAAGAGGAGTCTCCACC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACAGATGCTGCCTCAAGTaGTTTCCTGACTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHRCCLK*FPDCGS
Trigger: GGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCT...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGATTGTGGCACAGTTCTaGTATGGACGGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTIVAQF*YGRRTS
Trigger: AGACGTCCTCCGTCCATATCAGAACTGTGCCACAAT...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACCTTGCTCTTCTCCCCTaGCCAGGTCCGGCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHLALLP*PGPALG
Trigger: ACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAG...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCTGGGAAACCTACACTaGAACATTCCAGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTLGNLH*NIPALS
Trigger: GCTCAGTGCTGGAATGTTGCAGTGTAGGTTTCCCAG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGAAATCCAAACAAACGTaGCGGGTCGGCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTKSKQT*RVGKRS
Trigger: GCTTCTCTTGCCGACCCGCCACGTTTGTTTGGATTT...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCCCAGACCCTGCAGCTaGTCCATAGTGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIPRPCS*SIVTVR
Trigger: CCTGACCGTCACTATGGACCAGCTGCAGGGTCTGGG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGCCAGCAAGATGCCCTaGGCTCCAACCTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHASKMP*APTLGV
Trigger: CACTCCCAAGGTTGGAGCCCAGGGCATCTTGCTGGC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCTCTCCCCTCATGAGATaGCTGGAGCCCGATAAGGCC +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPSPLMR*LEPDKA
Trigger: GGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 72 bp CCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTaGACACGGTGCTCAGAACTGCATTGTGGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PRLVHPTVAQSS*TRCSELHCGTV
Trigger: AACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCCCCTCCTGGAGTCCATaGGAGTGCAGGCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSPSWSP*ECRQPR
Trigger: TCGTGGCTGCCTGCACTCTCATGGACTCCAGGAGGG...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR TCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGCTATCTCTTTCATTTaGGGAAAGCATCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTAISFI*GKHPSW
Trigger: CCAGCTCGGATGCTTTCCTCAAATGAAAGAGATAGC...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGGCAACATTCCAGCACTaGGCCGGGGGTGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWATFQH*AGGGPT
Trigger: TGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGC...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCACCAAGCTCCCTCCTaGGAAAATTCTATCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTHQAPS*ENSIQS
Trigger: TGACTGGATAGAATTTTCTCAGGAGGGAGCTTGGTG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGGTTCTCCCACCCGCTTaGCCAGCTCCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWVLPPA*PAPGSR
Trigger: TCTGCTACCCGGAGCTGGGCAAGCGGGTGGGAGAAC...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACTCACTGCCCAGACCCTaGAGCTGGTCCATAGTGACG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHSLPRP*SWSIVT
Trigger: CGTCACTATGGACCAGCTGCAGGGTCTGGGCAGTGA...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGACCTCTTCTTCCATGTaGAAGTTCACTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTTSSSM*KFTAPL
Trigger: CAAGGGTGCAGTGAACTTGCACATGGAAGAAGAGGT...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGAGAATCAATGAAGTCTaGCCCAGCTCCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTRINEV*PSSLDE
Trigger: CTCATCCAAGGAGCTGGGGCAGACTTCATTGATTCT...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACCTTTGTACTTCCAGGTaGAGACTCCTCTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHLCTSR*RLLLRS
Trigger: CGATCTCAAGAGGAGTCTCCACCTGGAAGTACAAAG...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCAGCTTGGGCTGCTGCTaGCTGGTCCTGCCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSSLGCC*LVLPPS
Trigger: TGAGGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCGCACTGAGCCGGGGGTaGCCCAACAGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSALSRG*PNRCCL
Trigger: GAGGCAGCATCTGTTGGGCCACCCCCGGCTCAGTGC...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACTCTGCCCCAGCTCCTTaGATGAGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHSAPAP*MRCSFE
Trigger: TTCAAAAGAACACCTCATCCAAGGAGCTGGGGCAGA...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACCATCCCAACAGCTTCTaGGGTAGGGAATGTATTCTT +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHHPNSF*GRECIL
Trigger: AAGAATACATTCCCTACCTCAGAAGCTGTTGGGATG...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCTGGTCTCTTCAACACTaGCCGAGTGCTGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPWSLQH*PSAGAT
Trigger: TGTAGCTCCAGCACTCGGTCAGTGTTGAAGAGACCA...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACACCAGAGGGCAGGGATaGGTAGGCACTGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHTRGQG*VGTETG
Trigger: ACCTGTTTCAGTGCCTACTCATCCCTGCCCTCTGGT...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAAGCCACAGGCACGGGTaGTTCCCTCTCACACCGCGA +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTESHRHG*FPLTPR
Trigger: TCGCGGTGTGAGAGGGAAGCACCCGTGCCTGTGGCT...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCAGCCACAGGCACGGGTaGTTCCCTCTCACACCGCGA +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSSHRHG*FPLTPR
Trigger: TCGCGGTGTGAGAGGGAAGCACCCGTGCCTGTGGCT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGAGGAGCCCATTCTCTaGAGATTACTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHEEPIL*RLLLFF
Trigger: GAAGAACAACAGTAATCTGCAGAGAATGGGCTCCTC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACTCACATACCGGCACATaGGGGGACCTCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHSHTGT*GDLSQK
Trigger: CTTCTGAGAGAGGTCCCCGCATGTGCCGGTATGTGA...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCAGGTCCGGCTCTTGGTaGGGAACTTCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPRSGSW*GTSSGL
Trigger: AAGACCTGAAGAAGTTCCGCACCAAGAGCCGGACCT...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGATACTCAGTGGACATaGTCCTCCCCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHDTQWT*SSPILW
Trigger: CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGGATGGAGGGAAGCTTaGGCTGCTGCTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEGWREA*AAAGWS
Trigger: GGACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGGTAGGTTTAAGGCATaGAAGTCCCAGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHGRFKA*KSQAPS
Trigger: AGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGGCCAGCAAGATGCCCTaGGCTCCAACCTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWASKMP*APTLGV
Trigger: CACTCCCAAGGTTGGAGCCCAGGGCATCTTGCTGGC...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCCCAATGTCATGGAACTaGGGTGAGGAAGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPPMSWN*GEEEQG
Trigger: GCCCTGTTCTTCCTCACCCCAGTTCCATGACATTGG...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGTCTCCTCTCCCCTCATaGGATGGCTGGAGCCCGATA +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWSPLPS*DGWSPI
Trigger: TATCGGGCTCCAGCCATCTCATGAGGGGAGAGGAGA...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAGTCATGGAACTGGGGTaGGGAAGAACAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLVMELG*GRTGPH
Trigger: GTGTGGCCCTGTTCTTCCTCACCCCAGTTCCATGAC...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGTTGCTCATAATCACTaGCCAGACCCTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHVAHNH*PDPAAG
Trigger: ACCAGCTGCAGGGTCTGGGCAGTGATTATGAGCAAC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCGGAAGCTTGGGCTGCTaGTGGCTGGTCCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFGSLGC*WLVLPP
Trigger: GGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCTTCC...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACAGCAGCTTGACACGGTaGTCAGAACTGCATTGTGGC +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHSSLTR*SELHCG
Trigger: GCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCT...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTAGATGCTGCCTCAAGTaGTTTCCTGACTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIRCCLK*FPDCGS
Trigger: GGAGCCACAGTCAGGAAAGCACTTGAGGCAGCATCT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTATCCAGTCATGTCCATaGCAGCACCCACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIIQSCP*QHPLPS
Trigger: AGAAGGGAGTGGGTGCTGGCATGGACATGACTGGAT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 72 bp GGCTCAGAGCAGCTTGACACGGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATGGACGGAGGACGTCTA +
Preference number: 4 (lower is better)
Translates to: GSEQLDTVLRTA*WHSSDMDGGRL
Trigger: TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCTCTCATCTGGGTCGATaGGCTGAAAGATGTCATGGT +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPSHLGR*AERCHG
Trigger: ACCATGACATCTTTCAGCTCATCGACCCAGATGAGA...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTATTGTGGCACAGTTCTaGTATGGACGGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIIVAQF*YGRRTS
Trigger: AGACGTCCTCCGTCCATATCAGAACTGTGCCACAAT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGCCACCTACACCTCAGTaGAGCCGTGATGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWPPTPQ*SRDGKE
Trigger: CTCCTTACCATCACGGCTTCACTGAGGTGTAGGTGG...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCTCACATACCGGCACATaGGGGGACCTCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSSHTGT*GDLSQK
Trigger: CTTCTGAGAGAGGTCCCCGCATGTGCCGGTATGTGA...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCTGGGAAACCTACACTaGAACATTCCAGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEILGNLH*NIPALS
Trigger: GCTCAGTGCTGGAATGTTGCAGTGTAGGTTTCCCAG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCTGGAATCTGTCTCAATaGGCGTGTAGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPWNLSQ*ACRKKS
Trigger: GGACTTCTTCCTACACGCGCATTGAGACAGATTCCA...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTAAATCCAAACAAACGTaGCGGGTCGGCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIKSKQT*RVGKRS
Trigger: GCTTCTCTTGCCGACCCGCCACGTTTGTTTGGATTT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCGAGGGTAAAGGGGGATaGAGGGAAGCTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSEGKGG*REAWAA
Trigger: AGCAGCCCAAGCTTCCCTCCATCCCCCTTTACCCTC...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGGTAGGTTTAAGGCATaGAAGTCCCAGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSGRFKA*KSQAPS
Trigger: AGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACAAGGAAGATACTCAGTaGACATGCTCCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHKEDTQ*TCSSPI
Trigger: GATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTT...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCTGGTCTCTTCAACACTaGCCGAGTGCTGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSWSLQH*PSAGAT
Trigger: TGTAGCTCCAGCACTCGGTCAGTGTTGAAGAGACCA...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGAGTTCACTGCACCCTTaGTGTGGCCTCCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWSSLHP*CGLPRI
Trigger: AATACGAGGGAGGCCACATCAAGGGTGCAGTGAACT...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGAGTTCACTGCACCCTTaGTGTGGCCTCCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGSSLHP*CGLPRI
Trigger: AATACGAGGGAGGCCACATCAAGGGTGCAGTGAACT...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTTGGCTCAGAGCAGCTTaGCACGGTGCTCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCWLRAA*HGAQNC
Trigger: GCAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCA...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGCCTCAAGTGCTTTCCTaGCTGTGGCTCCTATACCAG +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWPQVLS*LWLLYQ
Trigger: CTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGG...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTGCAACATTCCAGCACTaGGCCGGGGGTGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTATFQH*AGGGPT
Trigger: TGTTGGGCCACCCCCGGCTCAGTGCTGGAATGTTGC...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGTTGCTCATAATCACTaGCCAGACCCTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSVAHNH*PDPAAG
Trigger: ACCAGCTGCAGGGTCTGGGCAGTGATTATGAGCAAC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGCCATTCAAAACAGATaGCATAATTTCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTAIQNR*HNFWRD
Trigger: ATCTCTCCAGAAATTATGGCATCTGTTTTGAATGGC...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACCACAGCTGTCCCCTTTaGTTAAGTTTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHHSCPL*LSFSAA
Trigger: TGCTGCAGAGAAACTTAAGCAAAGGGGACAGCTGTG...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCACAGCTGTCCCCTTTaGTTAAGTTTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIHSCPL*LSFSAA
Trigger: TGCTGCAGAGAAACTTAAGCAAAGGGGACAGCTGTG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACTGGAATCTGTCTCAATaGGCGTGTAGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHWNLSQ*ACRKKS
Trigger: GGACTTCTTCCTACACGCGCATTGAGACAGATTCCA...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGCTGTCACAGGTGACTaGGGTGTAAAAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHAVTGD*GVKRGM
Trigger: CATTCCTCTTTTTACACCCCAGTCACCTGTGACAGC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGCCTCATCAGACAAAGTaGCTGTCACAGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGPHQTK*LSQVTG
Trigger: CCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGG...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACCTTTGTACTTCCAGGTaGAGACTCCTCTTGAGATCG +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHLCTSR*RLLLRS
Trigger: CGATCTCAAGAGGAGTCTCCACCTGGAAGTACAAAG...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTACTGCACCCTTGATGTaGCCTCCCTCGTATTCATAT +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEITAPLM*PPSYSY
Trigger: ATATGAATACGAGGGAGGCCACATCAAGGGTGCAGT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTCCCAGGTCCGGCTCTTaGTGCGGAACTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCPRSGS*CGTSSG
Trigger: ACCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGG...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAGGATGGAGGGAAGCTTaGGCTGCTGCTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQGWREA*AAAGWS
Trigger: GGACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCC...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGAGGGTAAAGGGGGATaGAGGGAAGCTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCEGKGG*REAWAA
Trigger: AGCAGCCCAAGCTTCCCTCCATCCCCCTTTACCCTC...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACAGCCGAGGTAGTCCCTaGGATAATAAAACCCTACCT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHSRGSP*DNKTLP
Trigger: AGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTAGCCGAGGTAGTCCCTaGGATAATAAAACCCTACCT +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEISRGSP*DNKTLP
Trigger: AGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTTCTGCCCCAGCTCCTTaGATGAGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEISAPAP*MRCSFE
Trigger: TTCAAAAGAACACCTCATCCAAGGAGCTGGGGCAGA...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTACGGGCGCCGGCAACCTaGAGATTAAATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLRAPAT*RLNPNK
Trigger: TTTGTTTGGATTTAATCTTCAGGTTGCCGGCGCCCG...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGGTGGAGACTCCTCTTaGGATCGTTCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEGGDSS*DRSGLF
Trigger: GAAGAGACCAGAACGATCTCAAGAGGAGTCTCCACC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTGAAGAAAACTCGCAGTaGAACACAACAATGACACGC +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIEENSQ*NTTMTR
Trigger: GCGTGTCATTGTTGTGTTTCACTGCGAGTTTTCTTC...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGAAGAAAACTCGCAGTaGAACACAACAATGACACGC +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHEENSQ*NTTMTR
Trigger: GCGTGTCATTGTTGTGTTTCACTGCGAGTTTTCTTC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCCCTCAAGTGCTTTCCTaGCTGTGGCTCCTATACCAG +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSPQVLS*LWLLYQ
Trigger: CTGGTATAGGAGCCACAGTCAGGAAAGCACTTGAGG...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTACCAGAGGGCAGGGATaGGTAGGCACTGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCTRGQG*VGTETG
Trigger: ACCTGTTTCAGTGCCTACTCATCCCTGCCCTCTGGT...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAATCCAGAGGCTTGCCATaGACGAGGGGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQSRGLP*TRGSPP
Trigger: AGGAGGAGACCCCCTCGTGCATGGCAAGCCTCTGGA...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAAGCTGTCCAGAGGCTTaGCATGCACGAGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQSCPEA*HARGGL
Trigger: GAGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCT...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCTGGCCCAACAGATGCTaGCTCAAGTGCTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSWPNRC*LKCFPD
Trigger: GTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCA...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGATACTCAGTGGACATaGTCCTCCCCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCDTQWT*SSPILW
Trigger: CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATC...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCAGACCCTGCAGCTaGTCCATAGTGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTPRPCS*SIVTVR
Trigger: CCTGACCGTCACTATGGACCAGCTGCAGGGTCTGGG...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGCTCCTCTTCAGAGCTaGACTACATCCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSAPLQS*TTSQQL
Trigger: AAGCTGTTGGGATGTAGTCCAGCTCTGAAGAGGAGC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCCCTCATCAGACAAAGTaGCTGTCACAGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSPHQTK*LSQVTG
Trigger: CCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGG...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGPTLGV*EVGLRH
Trigger: ATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGG...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTCTCAGAACTGCATTGTaGCACAGTTCTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEILRTAL*HSSDMD
Trigger: GTCCATATCAGAACTGTGCCACAATGCAGTTCTGAG...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGCCCCAGCTCCTTGGATaGGGTGTTCTTTTGAAATTC +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGPQLLG*GVLLKF
Trigger: GAATTTCAAAAGAACACCTCATCCAAGGAGCTGGGG...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGCCCCAGCTCCTTGGATaGGGTGTTCTTTTGAAATTC +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWPQLLG*GVLLKF
Trigger: GAATTTCAAAAGAACACCTCATCCAAGGAGCTGGGG...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGACCTCTTCTTCCATGTaGAAGTTCACTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGTSSSM*KFTAPL
Trigger: CAAGGGTGCAGTGAACTTGCACATGGAAGAAGAGGT...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTATCCAGTCATGTCCATaGCAGCACCCACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCIQSCP*QHPLPS
Trigger: AGAAGGGAGTGGGTGCTGGCATGGACATGACTGGAT...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGCTCCTCTTCAGAGCTaGACTACATCCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEAPLQS*TTSQQL
Trigger: AAGCTGTTGGGATGTAGTCCAGCTCTGAAGAGGAGC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACTTCCTTGTTCTCATCTaGGTCGATGAGCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHFLVLI*VDELKD
Trigger: ATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAA...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGGCTGTCACAGGTGACTaGGGTGTAAAAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGAVTGD*GVKRGM
Trigger: CATTCCTCTTTTTACACCCCAGTCACCTGTGACAGC...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCAGTTCTGCCTCTGTGTaGAGAGATCTTTACCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSSSASV*RDLYPP
Trigger: AGGAGGGTAAAGATCTCTTCACACAGAGGCAGAACT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR TCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCCTTCTCTGGATTAGTTaGCTCTTTGGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFLLWIS*LFGAGP
Trigger: GGGGCCAGCCCCAAAGAGTCAACTAATCCAGAGAAG...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCTTCCCAGGTTGTCTTTaGTATTTGGCCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSFPGCL*YLASSI
Trigger: AATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAA...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCAGAATCAATGAAGTCTaGCCCAGCTCCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSRINEV*PSSLDE
Trigger: CTCATCCAAGGAGCTGGGGCAGACTTCATTGATTCT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCACTGCACCCTTGATGTaGCCTCCCTCGTATTCATAT +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSTAPLM*PPSYSY
Trigger: ATATGAATACGAGGGAGGCCACATCAAGGGTGCAGT...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTCCAACCTTGGGAGTGTaGGAGGTAGGTTTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCPTLGV*EVGLRH
Trigger: ATGCCTTAAACCTACCTCCCACACTCCCAAGGTTGG...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAGTGGCTGTCACAGGTaGCTGGGGTGTAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFSGCHR*LGCKKR
Trigger: CCTCTTTTTACACCCCAGTCACCTGTGACAGCCACT...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGATGAGGTGTTCTTTTaGAATTCCCACTTTTATGGA +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHDEVFF*NSHFYG
Trigger: TCCATAAAAGTGGGAATTTCAAAAGAACACCTCATC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGAGGAGCCCATTCTCTaGAGATTACTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEEEPIL*RLLLFF
Trigger: GAAGAACAACAGTAATCTGCAGAGAATGGGCTCCTC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACGCCATTCAAAACAGATaGCATAATTTCTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHAIQNR*HNFWRD
Trigger: ATCTCTCCAGAAATTATGGCATCTGTTTTGAATGGC...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTAGGTCCGGCTCTTGGTaGGGAACTTCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTRSGSW*GTSSGL
Trigger: AAGACCTGAAGAAGTTCCGCACCAAGAGCCGGACCT...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCTTCCCAGGTTGTCTTTaGTATTTGGCCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSFPGCL*YLASSI
Trigger: AATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAA...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTTGGCCCAACAGATGCTaGCTCAAGTGCTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTWPNRC*LKCFPD
Trigger: GTCAGGAAAGCACTTGAGGCAGCATCTGTTGGGCCA...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTATCCCTCGTATTCATATaGGTATCGACAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLSLVFI*VSTVDD
Trigger: ATCATCGACTGTCGATACCCATATGAATACGAGGGA...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCAATGTCATGGAACTaGGGTGAGGAAGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTPMSWN*GEEEQG
Trigger: GCCCTGTTCTTCCTCACCCCAGTTCCATGACATTGG...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCCGGGCGCCGGCAACCTaGAGATTAAATCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFRAPAT*RLNPNK
Trigger: TTTGTTTGGATTTAATCTTCAGGTTGCCGGCGCCCG...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTCATCCCAACAGCTTCTaGGGTAGGGAATGTATTCTT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCHPNSF*GRECIL
Trigger: AAGAATACATTCCCTACCTCAGAAGCTGTTGGGATG...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCTTGCTTAAGTTTCTCTaGAGCAAAGAGGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSLLKFL*SKEGKG
Trigger: CCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAA...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGAGGAATGAAATTCCCTaGTTCACTGCTATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGRNEIP*FTAISF
Trigger: GAAAGAGATAGCAGTGAACCAGGGAATTTCATTCCT...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCCCAAAATGTTCTCAATaGTTCCTTTGGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSPKCSQ*FLWGKM
Trigger: CATCTTCCCCCAAAGGAACCATTGAGAACATTTTGG...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGTCCTATAAGGTCCCTTaGGTCATTGTCCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWSYKVP*VIVQNV
Trigger: AACATTTTGGACAATGACCCAAGGGACCTTATAGGA...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTATCCTATAAGGTCCCTTaGGTCATTGTCCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLSYKVP*VIVQNV
Trigger: AACATTTTGGACAATGACCCAAGGGACCTTATAGGA...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCTCCCTCGTATTCATATaGGTATCGACAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSSLVFI*VSTVDD
Trigger: ATCATCGACTGTCGATACCCATATGAATACGAGGGA...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAGGAAGATACTCAGTaGACATGCTCCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFKEDTQ*TCSSPI
Trigger: GATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTT...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAACACCAAGCTCCCTCCTaGGAAAATTCTATCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQHQAPS*ENSIQS
Trigger: TGACTGGATAGAATTTTCTCAGGAGGGAGCTTGGTG...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCGTTCTTCACCTCCAGTaGTTGCTCATAATCACTGCC +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFVLHLQ*LLIITA
Trigger: GGCAGTGATTATGAGCAACCACTGGAGGTGAAGAAC...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTTTCCTTGTTCTCATCTaGGTCGATGAGCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCFLVLI*VDELKD
Trigger: ATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAA...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAAGGAATGAAATTCCCTaGTTCACTGCTATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TALWHSSDMDGGRLTGTERNEIP*FTAISF
Trigger: GAAAGAGATAGCAGTGAACCAGGGAATTTCATTCCT...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTTACCAGCCAATGTCATaGAACTGGGGTGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTYQPMS*NWGEEE
Trigger: TTCTTCCTCACCCCAGTTCCATGACATTGGCTGGTA...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAATACCAGCCAATGTCATaGAACTGGGGTGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQYQPMS*NWGEEE
Trigger: TTCTTCCTCACCCCAGTTCCATGACATTGGCTGGTA...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTAGATACAGGTCTTACTaGCTTCTTAAACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCRYRSY*LLKLKG
Trigger: GCCTTTGAGTTTAAGAAGCCAGTAAGACCTGTATCT...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR CCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAACTCAGAACTGCATTGTaGCACAGTTCTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQLRTAL*HSSDMD
Trigger: GTCCATATCAGAACTGTGCCACAATGCAGTTCTGAG...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR GCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCTTGCTTAAGTTTCTCTaGAGCAAAGAGGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFLLKFL*SKEGKG
Trigger: CCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAA...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CCA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAACCAAAATGTTCTCAATaGTTCCTTTGGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQPKCSQ*FLWGKM
Trigger: CATCTTCCCCCAAAGGAACCATTGAGAACATTTTGG...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
3UTR CAA 72 bp ATTATCCCACAAAGACCTTTCCTTCCCAGGTTGTCTTaGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: IIPQRPFLPRLS*LFGQQHFCVTS
Trigger: AGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGGTCTTTGTGGGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR TCA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCGATGAGGTGTTCTTTTaGAATTCCCACTTTTATGGA +
Preference number: 4 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFDEVFF*NSHFYG
Trigger: TCCATAAAAGTGGGAATTTCAAAAGAACACCTCATC...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 90 bp CCGCGGGTCAAACACAAACACGACTCCGCGGTTCAGGGACGCGGCTaGCGCGGGCAAGCGGCGCGGCCGGGCGGGTGTGCGGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: PRVKHKHDSAVQGRG*RGQAARPGGCADPP
Trigger: TGGAGGGTCCGCACACCCGCCCGGCCGCGCCGCTTGCCCGCGGCAGCCGCGTCCCTGAACCGCGGAGTCGTGTTTGTGTTTGACCCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
CDS CCA 90 bp GGGCGGGCGGGCGCCGGCAACCTGAAGATTAAATCCAAACAAACGTaGCGGGTCGGCAAGAGAAGCCGGGCGAGAGCCTCGAGGCAACGG +
Preference number: 5 (lower is better)
Translates to: GRAGAGNLKIKSKQT*RVGKRSRARASRQR
Trigger: CCGTTGCCTCGAGGCTCTCGCCCGGCTTCTCTTGCCGACCCGCCACGTTTGTTTGGATTTAATCTTCAGGTTGCCGGCGCCCGCCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGGGATGGAGGGAAGCTaGGGCTGCTGCTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTGMEGS*GCCWLV
Trigger: GACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCCC...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGGAGCTGTCCAGAGGCTaGCCATGCACGAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTELSRG*PCTRGS
Trigger: AGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCTC...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 90 bp GCAACGGCCCAGGCTCACGCTGTCTTCGCTGTTCTCCCACCCGCTTaGCCAGCTCCGGGTAGCAGAAAACCAAGCCGACCTACACCTCTT +
Preference number: 5 (lower is better)
Translates to: ATAQAHAVFAVLPPA*PAPGSRKPSRPTPL
Trigger: AAGAGGTGTAGGTCGGCTTGGTTTTCTGCTACCCGGAGCTGGGCAAGCGGGTGGGAGAACAGCGAAGACAGCGTGAGCCTGGGCCGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR CAA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCGGGATGGAGGGAAGCTaGGGCTGCTGCTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPGMEGS*GCCWLV
Trigger: GACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCCC...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACGTGGCTCAGAGCAGCTaGACACGGTGCTCAGAACTG +
Preference number: 5 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHVAQSS*TRCSEL
Trigger: CAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCAC...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 90 bp CCTGCCGCCCTCAGAGCTTCTTCAGACGACTGTACATCTCCCTCTTaGTCTTCTCCCCTGCCCAGGTCCGGCTCTTGGTGCGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: PAALRASSDDCTSPS*SSPLPRSGSWCGTS
Trigger: AGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAGAGGGAGATGTACAGTCGTCTGAAGAAGCTCTGAGGGCGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPAQVRL*VRNFFR
Trigger: CCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGGC...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CCA 90 bp AAAGAGGGTAAAGGGGGATGGAGGGAAGCTTGGGCTGCTGCTGGCTaGTCCTGCCGCCCTCAGAGCTTCTTCAGACGACTGTACATCTCC +
Preference number: 5 (lower is better)
Translates to: KEGKGGWREAWAAAG*SCRPQSFFRRLYIS
Trigger: GGAGATGTACAGTCGTCTGAAGAAGCTCTGAGGGCGGCAGGACCAGCCAGCAGCAGCCCAAGCTTCCCTCCATCCCCCTTTACCCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGAAGTTCACTGCACCCTaGATGTGGCCTCCCTCGTAT +
Preference number: 5 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTKFTAP*MWPPSY
Trigger: ATACGAGGGAGGCCACATCAAGGGTGCAGTGAACTT...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCTTCCCAGGTTGTCTTaGCTATTTGGCCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTLPRLS*LFGQQH
Trigger: ATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CCCGATAAGGCCCCGGCTGGTTCATCCCACTGTGGCTCAGAGCAGCTTGACACGCCTTTCCTTCCCAGGTaGTCTTTGCTATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PDKAPAGSSHCGSEQLDTPFLPR*SLLFGQ
Trigger: CTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGG...CGTGTCAAGCTGCTCTGAGCCACAGTGGGATGAACCAGCCGGGGCCTTATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TCTCCCCTCATGAGATGGCTGGAGCCCGATAAGGCCCCGGCTGGTTCATCCCACCCTTTCCTTCCCAGGTaGTCTTTGCTATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SPLMRWLEPDKAPAGSSHPFLPR*SLLFGQ
Trigger: CTGGCCAAATAGCAAAGACAACCTGGGAAGGAAAGG...GTGGGATGAACCAGCCGGGGCCTTATCGGGCTCCAGCCATCTCATGAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TGGGAGGTAGGTTTAAGGCATGGAAGTCCCAGGCCCCCTCTCCAAATGTCACACATAGTGACGGTCAGGTaGGTGACAGGCGACAGTCCC +
Preference number: 5 (lower is better)
Translates to: WEVGLRHGSPRPPLQMSHIVTVR*VTGDSP
Trigger: GGGACTGTCGCCTGTCACCAACCTGACCGTCACTAT...GTGTGACATTTGGAGAGGGGGCCTGGGACTTCCATGCCTTAAACCTACCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TATGGACGGAGGACGTCTAACAGGGACAGAAGAGGCGTAGCCAGCAAGATGCCCCTTCACCTCCAGTGGTaGCTCATAATCACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: YGRRTSNRDRRGVASKMPLHLQW*LIITAQ
Trigger: CTGGGCAGTGATTATGAGCAACCACTGGAGGTGAAG...GGGCATCTTGCTGGCTACGCCTCTTCTGTCCCTGTTAGACGTCCTCCGTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAGAGCTGTCCAGAGGCTaGCCATGCACGAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEELSRG*PCTRGS
Trigger: AGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCTC...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTACCCCTCTCCTCACCCTaGGGTGGTCCATCCAACACT +
Preference number: 5 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLPLSSP*GGPSNT
Trigger: AGTGTTGGATGGACCACCCAAGGGTGAGGAGAGGGG...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 90 bp GAGCTTCTTCAGACGACTGTACATCTCCCTCTTGCTCTTCTCCCCTaGCCAGGTCCGGCTCTTGGTGCGGAACTTCTTCAGGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ELLQTTVHLPLALLP*PGPALGAELLQVFF
Trigger: AAAGAAGACCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAGAGGGAGATGTACAGTCGTCTGAAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGATAGTGACGGTCAGGTaGGTGACAGGCGACAGTCCC +
Preference number: 5 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGIVTVR*VTGDSP
Trigger: GGGACTGTCGCCTGTCACCAACCTGACCGTCACTAT...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTAAGTTCACTGCACCCTaGATGTGGCCTCCCTCGTAT +
Preference number: 5 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEIKFTAP*MWPPSY
Trigger: ATACGAGGGAGGCCACATCAAGGGTGCAGTGAACTT...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCGTGGCTCAGAGCAGCTaGACACGGTGCTCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSVAQSS*TRCSEL
Trigger: CAGTTCTGAGCACCGTGTCAAGCTGCTCTGAGCCAC...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCCCCTCCGTCTCCCCCCTCTCCTCACCCTaGGGTGGTCCATCCAACACT +
Preference number: 5 (lower is better)
Translates to: LLFGQQHFCVTSLLPSVSPLSSP*GGPSNT
Trigger: AGTGTTGGATGGACCACCCAAGGGTGAGGAGAGGGG...GGAGACGGAGGGGAGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS TCA 90 bp TCCAGGTGGAGACTCCTCTTGAGATCGTTCTGGTCTCTTCAACACTaGCCGAGTGCTGGAGCTACACAGGGAAGGGGAGTCAAACAGCTT +
Preference number: 5 (lower is better)
Translates to: SRWRLLLRSFWSLQH*PSAGATQGRGVKQL
Trigger: AAGCTGTTTGACTCCCCTTCCCTGTGTAGCTCCAGCACTCGGTCAGTGTTGAAGAGACCAGAACGATCTCAAGAGGAGTCTCCACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS GCA 90 bp GTCAAGGTTTGTAGTTCTCATGACGAGAGGAGCTGTCCAGAGGCTTaGCATGCACGAGGGGGTCTCCTCCTCATTCTTCAGATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VKVCSSHDERSCPEA*HARGGLLLILQILS
Trigger: GGAGAGAATCTGAAGAATGAGGAGGAGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCTCCTCTCGTCATGAGAACTACAAACCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 90 bp CACAAGGTTTGTAGTTCTCATGACGAGAGGAGCTGTCCAGAGGCTTaGCATGCACGAGGGGGTCTCCTCCTCATTCTTCAGATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: HKVCSSHDERSCPEA*HARGGLLLILQILS
Trigger: GGAGAGAATCTGAAGAATGAGGAGGAGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCTCCTCTCGTCATGAGAACTACAAACCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443342.5
CDS-3UTR CAA 90 bp GGCCACACCTCCCACCAAATAGATATCGGTAGCCAGTGGTGGGTCTGGGAGATTTGCTCTTCCTCCTCTTaGTACTTCCAGGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: GHTSHQIDIGSQWWVWEICSSSS*YFQVET
Trigger: AGTCTCCACCTGGAAGTACAAAGAGGAGGAAGAGCA...AATCTCCCAGACCCACCACTGGCTACCGATATCTATTTGGTGGGAGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CCA 90 bp ACTCCTCTTGAGATCGTTCTGGTCTCTTCAACACTGACCGAGTGCTaGAGCTACACAGGGAAGGGGAGTCAAACAGCTTGCATCGGTTGT +
Preference number: 5 (lower is better)
Translates to: TPLEIVLVSSTLTEC*SYTGKGSQTACIGC
Trigger: ACAACCGATGCAAGCTGTTTGACTCCCCTTCCCTGTGTAGCTCCAGCACTCGGTCAGTGTTGAAGAGACCAGAACGATCTCAAGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS-3UTR CAA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTAQVRL*VRNFFR
Trigger: CCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGGC...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCAGAAACCTGAATCTGTaGACTCGGAGGAGCCCATTC +
Preference number: 5 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSRNLNL*TRRSPF
Trigger: GAATGGGCTCCTCCGAGTCAACAGATTCAGGTTTCT...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAGGGGAGTCAAACAGCTaGCATCGGTTGTCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLGESNS*HRLSRF
Trigger: AAACCTTGACAACCGATGCAAGCTGTTTGACTCCCC...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp CTCCTGAGAAAATTCTATCCAGTCATGTCCATGCCAGCACCCACTCCCTTCTCCAGGTGGAGACTCCTCTaGAGATCGTTCTGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LLRKFYPVMSMPAPTPFSRWRLL*RSFWSL
Trigger: AAGAGACCAGAACGATCTCAAGAGGAGTCTCCACCT...GGAGAAGGGAGTGGGTGCTGGCATGGACATGACTGGATAGAATTTTCTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTATTCTCAATGGTTCCTTaGGGGGAAGATGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLFSMVP*GEDARD
Trigger: ATCCCTGGCATCTTCCCCCAAAGGAACCATTGAGAA...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TGTCCCCTTTGCTTAAGTTTCTCTGCAGCAAAGAGGGTAAAGGGGGATGGAGGGTTCTCAATGGTTCCTTaGGGGGAAGATGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: CPLCLSFSAAKRVKGDGGFSMVP*GEDARD
Trigger: ATCCCTGGCATCTTCCCCCAAAGGAACCATTGAGAA...CCCTCCATCCCCCTTTACCCTCTTTGCTGCAGAGAAACTTAAGCAAAGGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATG +
Preference number: 5 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWVLRTA*WHSSDM
Trigger: CATATCAGAACTGTGCCACAATGCAGTTCTGAGCAC...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS TCA 90 bp GTCCACGAAGCCATCATCCTCATCAGACAAAGTGGCTGTCACAGGTaGCTGGGGTGTAAAAAGAGGAATGAAATTCCCTGGTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: VHEAIILIRQSGCHR*LGCKKRNEIPWFTA
Trigger: AGCAGTGAACCAGGGAATTTCATTCCTCTTTTTACACCCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGGATGATGGCTTCGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000443342.5
CDS-3UTR CAA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTAGAAACCTGAATCTGTaGACTCGGAGGAGCCCATTC +
Preference number: 5 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCRNLNL*TRRSPF
Trigger: GAATGGGCTCCTCCGAGTCAACAGATTCAGGTTTCT...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTATGCTATCTCTTTCATTaGAGGAAAGCATCCGAGCTG +
Preference number: 5 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLCYLFH*RKASEL
Trigger: CAGCTCGGATGCTTTCCTCAAATGAAAGAGATAGCA...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS-3UTR CAA 90 bp ACGGTGCTCAGAACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAATGAGGTTGGCAAACTaGCCATTCAAAACAGATGCC +
Preference number: 5 (lower is better)
Translates to: TVLRTALWHSSDMDGGRLMRLAN*PFKTDA
Trigger: GGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCAT...TAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGTTCTGAGCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGGAGGAAAGATTTTCCTaGTTCTCATCTGGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SQQHKEDTQWTCSSPILWEERFS*FSSGSM
Trigger: CATCGACCCAGATGAGAACAAGGAAAATCTTTCCTC...CCACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351231.7
CDS CCA 90 bp CTGGAGTCCATGAGAGTGCAGGCAGCCACGAGATACAGGTCTTACTaGCTTCTTAAACTCAAAGGCTTCATTTTCCTTGTTCTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LESMRVQAATRYRSY*LLKLKGFIFLVLIW
Trigger: CCAGATGAGAACAAGGAAAATGAAGCCTTTGAGTTTAAGAAGCCAGTAAGACCTGTATCTCGTGGCTGCCTGCACTCTCATGGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000443342.5
CDS-3UTR CAA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCCTTCACCTCCAGTGGTaGCTCATAATCACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFLHLQW*LIITAQ
Trigger: CTGGGCAGTGATTATGAGCAACCACTGGAGGTGAAG...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp ACTGCATTGTGGCACAGTTCTGATATGGACGGAGGACGTCTAACAGGGACAGAAATGAGGTTGGCAAACTaGCCATTCAAAACAGATGCC +
Preference number: 5 (lower is better)
Translates to: TALWHSSDMDGGRLTGTEMRLAN*PFKTDA
Trigger: GGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCAT...TTCTGTCCCTGTTAGACGTCCTCCGTCCATATCAGAACTGTGCCACAATGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGTGCTCAGAACTGCATaGTGGCACAGTTCTGATATG +
Preference number: 5 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCVLRTA*WHSSDM
Trigger: CATATCAGAACTGTGCCACAATGCAGTTCTGAGCAC...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TATCACAGCAACATAAGGAAGATACTCAGTGGACATGCTCCTCCCCCATCCTGTGGTTGTCTTTGCTATTaGGCCAGCAGCATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: YHSNIRKILSGHAPPPSCGCLCY*ASSISV
Trigger: CACAGAAATGCTGCTGGCCAAATAGCAAAGACAACC...ACAGGATGGGGGAGGAGCATGTCCACTGAGTATCTTCCTTATGTTGCTGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CCA 90 bp ACGAAGCCATCATCCTCATCAGACAAAGTGGCTGTCACAGGTGACTaGGGTGTAAAAAGAGGAATGAAATTCCCTGGTTCACTGCTATCT +
Preference number: 5 (lower is better)
Translates to: TKPSSSSDKVAVTGD*GVKRGMKFPGSLLS
Trigger: AGATAGCAGTGAACCAGGGAATTTCATTCCTCTTTTTACACCCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGGATGATGGCTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000443342.5
CDS CCA 90 bp GTGCAAGTTCACTGCACCCTTGATGTGGCCTCCCTCGTATTCATATaGGTATCGACAGTCGATGATAACAAACTCTTTAATGAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: VQVHCTLDVASLVFI*VSTVDDNKLFNEVG
Trigger: GCCAACCTCATTAAAGAGTTTGTTATCATCGACTGTCGATACCCATATGAATACGAGGGAGGCCACATCAAGGGTGCAGTGAACTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS-3UTR CAA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAGGGGAGTCAAACAGCTaGCATCGGTTGTCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQGESNS*HRLSRF
Trigger: AAACCTTGACAACCGATGCAAGCTGTTTGACTCCCC...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCCTTCCCAGGTTGTCTTaGCTATTTGGCCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFLPRLS*LFGQQH
Trigger: ATGCTGCTGGCCAAATAGCAAAGACAACCTGGGAAG...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp TCCCAGGTTGTCTTTGCTATTTGGCCAGCAGCATTTCTGTGTAACTTCTCTACTCTCTGCAGATTACTGTaGTTCTTCACCTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SQVVFAIWPAAFLCNFSTLCRLL*FFTSSG
Trigger: ACCACTGGAGGTGAAGAACAACAGTAATCTGCAGAG...AGTAGAGAAGTTACACAGAAATGCTGCTGGCCAAATAGCAAAGACAACCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAGGTTGTCTTTGCTATTaGGCCAGCAGCATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQGCLCY*ASSISV
Trigger: CACAGAAATGCTGCTGGCCAAATAGCAAAGACAACC...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp AAAGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCACAACAATGACACGCTaGCCATCAGTAGGTACAATG +
Preference number: 5 (lower is better)
Translates to: KAEVVPGIIKPYLEWQYFTTMTR*PSVGTM
Trigger: CATTGTACCTACTGATGGCAAGCGTGTCATTGTTGT...GAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS-3UTR CAA 90 bp AGCCGAGGTAGTCCCTGGGATAATAAAACCCTACCTAGAATGGCAGTATTTCAAACAACAATGACACGCTaGCCATCAGTAGGTACAATG +
Preference number: 5 (lower is better)
Translates to: SRGSPWDNKTLPRMAVFQTTMTR*PSVGTM
Trigger: CATTGTACCTACTGATGGCAAGCGTGTCATTGTTGT...TTGAAATACTGCCATTCTAGGTAGGGTTTTATTATCCCAGGGACTACCTCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS TCA 90 bp CTCTTTCATTTGAGGAAAGATTTTCCTTGTTCTCATCTGGGTCGATaGGCTGAAAGATGTCATGGTCAAGAGAATCAGAATGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFHLRKDFPCSHLGR*AERCHGQENQNGSS
Trigger: AGAGGAGCCATTCTGATTCTCTTGACCATGACATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAAAATCTTTCCTCAAATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351231.7
CDS TCA 90 bp ATAGTAGGCACTGAGCACTTAGTGCTCAATGAATATATACTCAGCTaGCATTATATAGAGATGAGCAAAACGTCCTTTGCCCTCACAAAA +
Preference number: 5 (lower is better)
Translates to: IVGTEHLVLNEYILS*HYIEMSKTSFALTK
Trigger: TTTTGTGAGGGCAAAGGACGTTTTGCTCATCTCTATATAATGTCAGCTGAGTATATATTCATTGAGCACTAAGTGCTCAGTGCCTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459900.1
CDS GCA 90 bp ATATATACTCAGCTGACATTATATAGAGATGAGCAAAACGTCCTTTaGCCTCACAAAAACTGTCTACATAATCCTGCGTCAAGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: IYTQLTLYRDEQNVL*PHKNCLHNPASREV
Trigger: CACTTCTCTTGACGCAGGATTATGTAGACAGTTTTTGTGAGGGCAAAGGACGTTTTGCTCATCTCTATATAATGTCAGCTGAGTATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459900.1
CDS GCA 72 bp ACCCTCCAGGCGCCAGCCACCAGCCACAGGCACGGGTaGTTCCCTCTCACACCGCGAGGCCAGCGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: TLQAPATSHRHG*FPLTPRGQRAG
Trigger: GCCCGCCCGCTGGCCTCGCGGTGTGAGAGGGAAGCACCCGTGCCTGTGGCTGGTGGCTGGCGCCTGGAGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
CDS GCA 72 bp AAACACAAACACGACTCCGCGGTTCAGGGACGCGGCTaGCGCGGGCAAGCGGCGCGGCCGGGCGGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: KHKHDSAVQGRG*RGQAARPGGCA
Trigger: CGCACACCCGCCCGGCCGCGCCGCTTGCCCGCGGCAGCCGCGTCCCTGAACCGCGGAGTCGTGTTTGTGTTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
CDS CAA 72 bp CCCAGACCCTGCAGCTGGTCCATAGTGACGGTCAGGTaGGTGACAGGCGACAGTCCCCCGGCGGCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: PRPCSWSIVTVR*VTGDSPPAAEA
Trigger: CGCTTCAGCCGCCGGGGGACTGTCGCCTGTCACCAACCTGACCGTCACTATGGACCAGCTGCAGGGTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
ENST00000443342.5
CDS GCA 72 bp CAGGCTCACGCTGTCTTCGCTGTTCTCCCACCCGCTTaGCCAGCTCCGGGTAGCAGAAAACCAAGCCGACCT +
Preference number: 6 (lower is better)
Translates to: QAHAVFAVLPPA*PAPGSRKPSRP
Trigger: AGGTCGGCTTGGTTTTCTGCTACCCGGAGCTGGGCAAGCGGGTGGGAGAACAGCGAAGACAGCGTGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302506.8
CDS CCA 72 bp GGCGCCGGCAACCTGAAGATTAAATCCAAACAAACGTaGCGGGTCGGCAAGAGAAGCCGGGCGAGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: GAGNLKIKSKQT*RVGKRSRARAS
Trigger: CGAGGCTCTCGCCCGGCTTCTCTTGCCGACCCGCCACGTTTGTTTGGATTTAATCTTCAGGTTGCCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CAA 90 bp TCCTGCCGCCCTCAGAGCTTCTTCAGACGACTGTACATCTCCCTCTaGCTCTTCTCCCCTGCCCAGGTCCGGCTCTTGGTGCGGAACTTC +
Preference number: 6 (lower is better)
Translates to: SCRPQSFFRRLYISL*LFSPAQVRLLVRNF
Trigger: GAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAGAGGGAGATGTACAGTCGTCTGAAGAAGCTCTGAGGGCGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CAA 90 bp CTGTACATCTCCCTCTTGCTCTTCTCCCCTGCCCAGGTCCGGCTCTaGGTGCGGAACTTCTTCAGGTCTTCTTTAAAGTCCTCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: LYISLLLFSPAQVRL*VRNFFRSSLKSSWC
Trigger: GCACCACGAGGACTTTAAAGAAGACCTGAAGAAGTTCCGCACCAAGAGCCGGACCTGGGCAGGGGAGAAGAGCAAGAGGGAGATGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS GCA 72 bp TGTAGTTCTCATGACGAGAGGAGCTGTCCAGAGGCTTaGCATGCACGAGGGGGTCTCCTCCTCATTCTTCAG +
Preference number: 6 (lower is better)
Translates to: CSSHDERSCPEA*HARGGLLLILQ
Trigger: CTGAAGAATGAGGAGGAGACCCCCTCGTGCATGGCAAGCCTCTGGACAGCTCCTCTCGTCATGAGAACTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000443342.5
CDS TCA 72 bp AGACTCCTCTTGAGATCGTTCTGGTCTCTTCAACACTaGCCGAGTGCTGGAGCTACACAGGGAAGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: RLLLRSFWSLQH*PSAGATQGRGV
Trigger: GACTCCCCTTCCCTGTGTAGCTCCAGCACTCGGTCAGTGTTGAAGAGACCAGAACGATCTCAAGAGGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS CAA 72 bp CTTTGGGGCTGGCCCCAGACATGCTCTTCCTCCTCTTaGTACTTCCAGGTGGAGACTCCTCTTGAGATCGTT +
Preference number: 6 (lower is better)
Translates to: LWGWPQTCSSSS*YFQVETPLEIV
Trigger: AACGATCTCAAGAGGAGTCTCCACCTGGAAGTACAAAGAGGAGGAAGAGCATGTCTGGGGCCAGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS TCA 72 bp CTGATGAAGAGTCTCATGGGCCTTCTCTGGATTAGTTaGCTCTTTGGGGCTGGCCCCAGACATGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LMKSLMGLLWIS*LFGAGPRHALP
Trigger: AGGAAGAGCATGTCTGGGGCCAGCCCCAAAGAGTCAACTAATCCAGAGAAGGCCCATGAGACTCTTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS CAA 72 bp TCTCTGCAGATTACTGTTGTTCTTCACCTCCAGTGGTaGCTCATAATCACTGCCCAGACCCTGCAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: SLQITVVLHLQW*LIITAQTLQLV
Trigger: GACCAGCTGCAGGGTCTGGGCAGTGATTATGAGCAACCACTGGAGGTGAAGAACAACAGTAATCTGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
ENST00000443342.5
CDS CAA 72 bp GTGCTGGAGCTACACAGGGAAGGGGAGTCAAACAGCTaGCATCGGTTGTCAAGGTTTGTAGTTCTCATGACG +
Preference number: 6 (lower is better)
Translates to: VLELHREGESNS*HRLSRFVVLMT
Trigger: CGTCATGAGAACTACAAACCTTGACAACCGATGCAAGCTGTTTGACTCCCCTTCCCTGTGTAGCTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS TCA 72 bp TTCCTCCTCTTTGTACTTCCAGGTGGAGACTCCTCTTaGGATCGTTCTGGTCTCTTCAACACTGACCGAGTG +
Preference number: 6 (lower is better)
Translates to: FLLFVLPGGDSS*DRSGLFNTDRV
Trigger: CACTCGGTCAGTGTTGAAGAGACCAGAACGATCTCAAGAGGAGTCTCCACCTGGAAGTACAAAGAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS CCA 72 bp CATTCTCTGCAGATTACTGTTGTTCTTCACCTCCAGTaGTTGCTCATAATCACTGCCCAGACCCTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HSLQITVVLHLQ*LLIITAQTLQL
Trigger: CAGCTGCAGGGTCTGGGCAGTGATTATGAGCAACCACTGGAGGTGAAGAACAACAGTAATCTGCAGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
ENST00000443342.5
CDS TCA 72 bp GCCATCATCCTCATCAGACAAAGTGGCTGTCACAGGTaGCTGGGGTGTAAAAAGAGGAATGAAATTCCCTGG +
Preference number: 6 (lower is better)
Translates to: AIILIRQSGCHR*LGCKKRNEIPW
Trigger: CCAGGGAATTTCATTCCTCTTTTTACACCCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGGATGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000443342.5
CDS GCA 72 bp AAACCTGAATCTGTTGACTCGGAGGAGCCCATTCTCTaGAGATTACTGTTGTTCTTCACCTCCAGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: KPESVDSEEPIL*RLLLFFTSSGC
Trigger: GCAACCACTGGAGGTGAAGAACAACAGTAATCTGCAGAGAATGGGCTCCTCCGAGTCAACAGATTCAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000437972.1
ENST00000443342.5
CDS GCA 72 bp TTCTTCAATAAGAAGTCTTCAACCTCTTCTTCCATGTaGAAGTTCACTGCACCCTTGATGTGGCCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: FFNKKSSTSSSM*KFTAPLMWPPS
Trigger: CGAGGGAGGCCACATCAAGGGTGCAGTGAACTTGCACATGGAAGAAGAGGTTGAAGACTTCTTATTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000351231.7
CDS CCA 72 bp TCATCCTCATCAGACAAAGTGGCTGTCACAGGTGACTaGGGTGTAAAAAGAGGAATGAAATTCCCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SSSSDKVAVTGD*GVKRGMKFPGS
Trigger: TGAACCAGGGAATTTCATTCCTCTTTTTACACCCCAGTCACCTGTGACAGCCACTTTGTCTGATGAGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000443342.5
CDS CCA 72 bp ATGAGAGTGCAGGCAGCCACGAGATACAGGTCTTACTaGCTTCTTAAACTCAAAGGCTTCATTTTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: MRVQAATRYRSY*LLKLKGFIFLV
Trigger: AACAAGGAAAATGAAGCCTTTGAGTTTAAGAAGCCAGTAAGACCTGTATCTCGTGGCTGCCTGCACTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000443342.5
CDS CCA 72 bp CACTGCACCCTTGATGTGGCCTCCCTCGTATTCATATaGGTATCGACAGTCGATGATAACAAACTCTTTAAT +
Preference number: 6 (lower is better)
Translates to: HCTLDVASLVFI*VSTVDDNKLFN
Trigger: ATTAAAGAGTTTGTTATCATCGACTGTCGATACCCATATGAATACGAGGGAGGCCACATCAAGGGTGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS TCA 72 bp CAAAGGCTTCATTTTCCTTGTTCTCATCTGGGTCGATaGGCTGAAAGATGTCATGGTCAAGAGAATCAGAAT +
Preference number: 6 (lower is better)
Translates to: QRLHFPCSHLGR*AERCHGQENQN
Trigger: ATTCTGATTCTCTTGACCATGACATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAAAATGAAGCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000443342.5
CDS GCA 72 bp CAGCTGACATTATATAGAGATGAGCAAAACGTCCTTTaGCCTCACAAAAACTGTCTACATAATCCTGCGTCA +
Preference number: 6 (lower is better)
Translates to: QLTLYRDEQNVL*PHKNCLHNPAS
Trigger: TGACGCAGGATTATGTAGACAGTTTTTGTGAGGGCAAAGGACGTTTTGCTCATCTCTATATAATGTCAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459900.1
CDS CCA 72 bp CTTAAACTCAAAGGCTTCATTTTCCTTGTTCTCATCTaGGTCGATGAGCTGAAAGATGTCATGGTCAAGAGA +
Preference number: 6 (lower is better)
Translates to: LKLKGFIFLVLI*VDELKDVMVKR
Trigger: TCTCTTGACCATGACATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAAAATGAAGCCTTTGAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302506.8
ENST00000443342.5
CDS TCA 72 bp TTGAGGAAAGATTTTCCTTGTTCTCATCTGGGTCGATaGGCTGAAAGATGTCATGGTCAAGAGAATCAGAAT +
Preference number: 6 (lower is better)
Translates to: LRKDFPCSHLGR*AERCHGQENQN
Trigger: ATTCTGATTCTCTTGACCATGACATCTTTCAGCTCATCGACCCAGATGAGAACAAGGAAAATCTTTCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351231.7
CDS CAA 90 bp TCATATGGGTATCGACAGTCGATGATAACAAACTCTTTAATGAGGTaGGCAAACTTGCCATTCAAAACAGATGCCATAATTTCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: SYGYRQSMITNSLMR*ANLPFKTDAIISGE
Trigger: CTCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCATTAAAGAGTTTGTTATCATCGACTGTCGATACCCATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS TCA 72 bp ACTGAGCACTTAGTGCTCAATGAATATATACTCAGCTaGCATTATATAGAGATGAGCAAAACGTCCTTTGCC +
Preference number: 6 (lower is better)
Translates to: TEHLVLNEYILS*HYIEMSKTSFA
Trigger: GGCAAAGGACGTTTTGCTCATCTCTATATAATGTCAGCTGAGTATATATTCATTGAGCACTAAGTGCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459900.1
CDS CAA 72 bp TCGATGATAACAAACTCTTTAATGAGGTTGGCAAACTaGCCATTCAAAACAGATGCCATAATTTCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: SMITNSLMRLAN*PFKTDAIISGE
Trigger: CTCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCATTAAAGAGTTTGTTATCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS CAA 90 bp TATCGACAGTCGATGATAACAAACTCTTTAATGAGGTTGGCAAACTaGCCATTCAAAACAGATGCCATAATTTCTGGAGAGATGTATTTT +
Preference number: 6 (lower is better)
Translates to: YRQSMITNSLMRLAN*PFKTDAIISGEMYF
Trigger: AAAATACATCTCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCATTAAAGAGTTTGTTATCATCGACTGTCGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1
CDS CAA 72 bp TATCGACAGTCGATGATAACAAACTCTTTAATGAGGTaGGCAAACTTGCCATTCAAAACAGATGCCATAATT +
Preference number: 6 (lower is better)
Translates to: YRQSMITNSLMR*ANLPFKTDAII
Trigger: AATTATGGCATCTGTTTTGAATGGCAAGTTTGCCAACCTCATTAAAGAGTTTGTTATCATCGACTGTCGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302506.8
ENST00000351231.7
ENST00000459900.1