RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC20B (Homo sapiens)

Ensembl gene IDs: ENSG00000164287

Ensembl transcript IDs: ENST00000296733.5, ENST00000322374.10, ENST00000381375.7, ENST00000507931.1, ENST00000513180.5

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGGCACCTGGATCGTGGGGCCATATTGTCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCCTGCCATCCGGTGACCACTTCAGAG +
Preference number: 1 (lower is better)
Translates to: HWHLDRGAILSAVHH*SRWKAACHPVTTSE
Trigger: CTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR TCA 90 bp CAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAGTGTTCC +
Preference number: 1 (lower is better)
Translates to: QQSITAAAGKQPAIR*PLQSTHSLLVAKCS
Trigger: GGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 90 bp CTGGATCGTGGGGCCATATTGTCAGCAGTCCATCACTGCAGCCGCTaGAAAGCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAG +
Preference number: 1 (lower is better)
Translates to: LDRGAILSAVHHCSR*KAACHPVTTSEHTQ
Trigger: CTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 90 bp GCCATATTGTCAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGC +
Preference number: 1 (lower is better)
Translates to: AILSAVHHCSRWKAA*HPVTTSEHTQLACG
Trigger: GCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 90 bp GTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGTCCATCACTGCAGCCGCTGGAAAGC +
Preference number: 1 (lower is better)
Translates to: VMTFSGWPCALAPGS*GHIVSSPSLQPLES
Trigger: GCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 90 bp AGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGTCAGCAGTCCATCACTGCAGCCGCT +
Preference number: 1 (lower is better)
Translates to: RLGYDFQRLALCTGT*IVGPYCQQSITAAA
Trigger: AGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 90 bp TCCATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTGTCAGC +
Preference number: 1 (lower is better)
Translates to: SMALTAVDWVMTFSG*PCALAPGSWGHIVS
Trigger: GCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 90 bp CTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTaGACTGGCACCTGGATCGTGGGGCCATATTGTCAGCAGTCCATC +
Preference number: 1 (lower is better)
Translates to: LDCRRLGYDFQRLAL*TGTWIVGPYCQQSI
Trigger: GATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 90 bp AAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACTaGCAGGGACACCAATCCATGGCCTTGACTGCCGTAGACTGGGTT +
Preference number: 1 (lower is better)
Translates to: KRPSFIPPPMARTPD*QGHQSMALTAVDWV
Trigger: AACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 90 bp CAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATaGCTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAA +
Preference number: 1 (lower is better)
Translates to: QDLLEIATGNYLPTA*LQSFPDNAHNTTIQ
Trigger: TTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR TCA 90 bp CCACCATCCAAAGTTTCCTACCAGCTTTCGGCAAAGAGGTACACCTaGAAGTTTACAGGGGCTGCCTGCTGTAAGGTTTCAGAGTCATTA +
Preference number: 1 (lower is better)
Translates to: PPSKVSYQLSAKRYT*KFTGAACCKVSESL
Trigger: TAATGACTCTGAAACCTTACAGCAGGCAGCCCCTGTAAACTTTCAGGTGTACCTCTTTGCCGAAAGCTGGTAGGAAACTTTGGATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR TCA 90 bp GTTCTAAGACAATTACAGCAGACTGGCTGTCAGGCACACAGGATGTaGCTAGGTGAAGCAAAAGAAAAGAGAGCAAAGGGTGAACTGAGG +
Preference number: 1 (lower is better)
Translates to: VLRQLQQTGCQAHRM*LGEAKEKRAKGELR
Trigger: CCTCAGTTCACCCTTTGCTCTCTTTTCTTTTGCTTCACCTAGTCACATCCTGTGTGCCTGACAGCCAGTCTGCTGTAATTGTCTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR TCA 90 bp ACAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTTGTCTTAGGTAGCCAGATTAAGGAA +
Preference number: 1 (lower is better)
Translates to: TVGQVHTVTSFLGVP*PVAISFVLGSQIKE
Trigger: TTCCTTAATCTGGCTACCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR TCA 90 bp CCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTATGAAATaGACCACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTG +
Preference number: 1 (lower is better)
Translates to: PEGKCSRQVSLAFMK*TTLVLSRGFSHRIL
Trigger: CAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGTGGTTCATTTCATAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR GCA 90 bp AAGAAAAGAAGCGGATCTCTGGGAAGCAGAGCAAGTAAAGCAATCTaGAAAAGAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTA +
Preference number: 1 (lower is better)
Translates to: KKRSGSLGSRASKAI*KRRTGEQAFTSRRV
Trigger: TACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTCTTTTGCAGATTGCTTTACTTGCTCTGCTTCCCAGAGATCCGCTTCTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CCA 90 bp ATTAGTGTATTCTATATGTGGCCCAAAACAATCCTTCTTCCAATGTaGCCCAGGGAAGCCAAAAGATTGGACACCTCTGTATTTAGAAGT +
Preference number: 1 (lower is better)
Translates to: ISVFYMWPKTILLPM*PREAKRLDTSVFRS
Trigger: ACTTCTAAATACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCACATATAGAATACACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CCA 90 bp ATCAAGAAGAGTATTTCAACTTGTTTGATACTCATAAAAACCCCATaGAGAAGACATAGCCAACATCATCATCTTCACTCAGAAATAAGG +
Preference number: 1 (lower is better)
Translates to: IKKSISTCLILIKTP*RRHSQHHHLHSEIR
Trigger: CCTTATTTCTGAGTGAAGATGATGATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAGTATCAAACAAGTTGAAATACTCTTCTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CAA 90 bp TCAGCGGTTGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATaGTCAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGCCTGCCAT +
Preference number: 2 (lower is better)
Translates to: SAVGPVHWHLDRGAI*SAVHHCSRWKAACH
Trigger: ATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR TCA 90 bp GCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACAC +
Preference number: 2 (lower is better)
Translates to: ALTAVDWVMTFSGWPCALQPAIR*PLQSTH
Trigger: GTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTG...CAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp ATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTCATCACTGCAGCCGCTaGAAAGCAGCCTGCCATCCG +
Preference number: 2 (lower is better)
Translates to: MTFSGWPCALAPGSWGHIHHCSR*KAACHP
Trigger: CGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATG...AATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CAA 90 bp ATCCATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTGTCAG +
Preference number: 2 (lower is better)
Translates to: IHGLDCRRLGYDFQR*ALCTGTWIVGPYCQ
Trigger: CTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp AGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATCTCCTGTTGGCCCTGTGCACTaGCACCTGGATCGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: RSTQSHHSWEYLDQLQSPVGPVH*HLDRGA
Trigger: GGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAAC...AGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR GCA 90 bp CAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGTCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: QWDRSTQSHHSWEYLDQLSAVHH*SRWKAA
Trigger: GGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGA...CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR GCA 90 bp CACAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTGCAAGGACCCCAGACTaGCAGGGACACCAATCCATG +
Preference number: 2 (lower is better)
Translates to: HSGTGPHSHIILGSTLTSARTPD*QGHQSM
Trigger: CATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGC...ACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR GCA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCA +
Preference number: 2 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSRWKAA*HPVTTS
Trigger: TGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCG...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp GGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATTCATTCCTCCTCCAATaGCAAGGACCCCAGACTGCC +
Preference number: 2 (lower is better)
Translates to: GTGPHSHIILGSTLTSCNSFLLQ*QGPQTA
Trigger: GGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGA...ATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR TCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGGCAAAGAGGTACACCTaGAAGTTTACAGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: RPCQSTPWICLPELIPEGAKRYT*KFTGAA
Trigger: GGCAGCCCCTGTAAACTTTCAGGTGTACCTCTTTGC...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR GCA 90 bp AAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACATCCATGGCCTTGACTaGCGTAGACTGGGTTATGAC +
Preference number: 2 (lower is better)
Translates to: KMCKRPSFIPPPMARTPDIHGLD*RRLGYD
Trigger: GTCATAACCCAGTCTACGGCAGTCAAGGCCATGGAT...GTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTAGGAGGTTCCCTGAGTaGGAGACCAGGATAAGGATG +
Preference number: 2 (lower is better)
Translates to: QGTERISTGLLDVQPSSGRRFPE*ETRIRM
Trigger: CATCCTTATCCTGGTCTCCCACTCAGGGAACCTCCT...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGT +
Preference number: 2 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSLCTGT*IVGPYC
Trigger: ACAATATGGCCCCACGATCCAGGTGCCAGTGCACAG...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACAGGGTCAAAAGACTTTaGGAGGCCAAGCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: WPKTILLPMWPREAKRLDRVKRL*EAKHSG
Trigger: GCCACTGTGCTTGGCCTCCCAAAGTCTTTTGACCCT...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR TCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGAGCAAAGGGTGAACTaGGGAAGCACAGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: QGTERISTGLLDVQPSSGEQRVN*GSTEQN
Trigger: ATTCTGCTCTGTGCTTCCTCAGTTCACCCTTTGCTC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGGTCTGGCCAACATGGTaGAACCCCTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: RPCQSTPWICLPELIPEGVWPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGGTTTCACCATGTTGGCCAGAC...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR GCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGTTTACAGGGGCTGCCTaGTGTAAGGTTTCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: RPCQSTPWICLPELIPEGFTGAA*CKVSES
Trigger: TGACTCTGAAACCTTACAGCAGGCAGCCCCTGTAAA...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CCA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGCTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: FISKMCKRPSFIPPPMARLAPGS*GHIVSS
Trigger: ACTGCTGACAATATGGCCCCACGATCCAGGTGCCAG...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCT +
Preference number: 2 (lower is better)
Translates to: AFISKMCKRPSFIPPPMAMTFSG*PCALAP
Trigger: AGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR TCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAAATCAGGAGGTTCCCTaGGTGGGAGACCAGGATAAG +
Preference number: 2 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQNQEVP*VGDQDK
Trigger: CTTATCCTGGTCTCCCACTCAGGGAACCTCCTGATT...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp ACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTAGACAGGAGAATCGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TLVLSRGFSHRILAPKQLDRRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGTC...TAATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR GCA 90 bp AGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGCATTTAAGAGCACACACAGCTTaGTTGTGGCGAAGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: RNKSVSLCLGSGCSSQHLRAHTA*LWRSVP
Trigger: TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCT...TAAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR GCA 90 bp GGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATTGCTTGGGGTCTGGATaGTCTTCCCAGCATTTATAT +
Preference number: 2 (lower is better)
Translates to: GTGPHSHIILGSTLTSCNCLGSG*SSQHLY
Trigger: ATATAAATGCTGGGAAGAGCATCCAGACCCCAAGCA...ATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATAGGAGGTTCCCTGAGTaGGAGACCAGGATAAGGATG +
Preference number: 2 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDRRFPE*ETRIRM
Trigger: CATCCTTATCCTGGTCTCCCACTCAGGGAACCTCCT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp ACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAATATCTCCCCACTGCATaGCTACAGAGCTTCCCTGAT +
Preference number: 2 (lower is better)
Translates to: TPWICLPELIPEGKCSRQYLPTA*LQSFPD
Trigger: ATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATA...TTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR TCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGACACAAAAACGTCCATaGTGGCAACAGAAAGTAGGA +
Preference number: 2 (lower is better)
Translates to: RPCQSTPWICLPELIPEGTQKRP*WQQKVG
Trigger: TCCTACTTTCTGTTGCCATCATGGACGTTTTTGTGT...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCAGGCACACAGGATGTaGCTAGGTGAAGCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDQAHRM*LGEAKE
Trigger: TTCTTTTGCTTCACCTAGTCACATCCTGTGTGCCTG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAATATGAGGTTTGGAGCTaGGGAGAAAAGTCATACGGG +
Preference number: 2 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQYEVWS*GEKSYG
Trigger: CCCGTATGACTTTTCTCCCCAGCTCCAAACCTCATA...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAAACCTAGCAGTGGTGTaGAGTCAAGAGGATCAGTTC +
Preference number: 2 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQNLAVV*SQEDQF
Trigger: GAACTGATCCTCTTGACTCCACACCACTGCTAGGTT...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGACCTAACTTCAAGTCCTaGGCTGAGGACTCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRPNFKS*AEDSRG
Trigger: ACCTCTGGAGTCCTCAGCCCAGGACTTGAAGTTAGG...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: FISKMCKRPSFIPPPMARLTAVD*VMTFSG
Trigger: ACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR TCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGGCAATCAGAAATATaGGGTTTGGAGCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWRQSEI*GLELGR
Trigger: TCTCCCCAGCTCCAAACCTCATATTTCTGATTGCCT...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGCATGCTTAACATACTaGCTAGCATATAGTGAGATT +
Preference number: 2 (lower is better)
Translates to: QGTERISTGLLDVQPSSGACLTY*LAYSEI
Trigger: AATCTCACTATATGCTAGGCAGTATGTTAAGCATGC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGACAGAACAGCGAACTaGTCAAGTTTGAAGGAACCT +
Preference number: 2 (lower is better)
Translates to: QANAKNSNPGNIISKHFLDRTAN*SSLKEP
Trigger: AGGTTCCTTCAAACTTGATCAGTTCGCTGTTCTGTC...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTATCAACAACAGAGCCTTaGATAGAGTATTCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLSTTEP*IEYSEG
Trigger: GCCCTCTGAATACTCTATGCAAGGCTCTGTTGTTGA...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGAAACCTAGCAGTGGTGTaGAGTCAAGAGGATCAGTTC +
Preference number: 2 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRNLAVV*SQEDQF
Trigger: GAACTGATCCTCTTGACTCCACACCACTGCTAGGTT...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGTCTCACACAGAATTCTaGCTCCCAAACAATTATTTT +
Preference number: 2 (lower is better)
Translates to: RPCQSTPWICLPELIPEGSHTEF*LPNNYF
Trigger: AAAATAATTGTTTGGGAGCCAGAATTCTGTGTGAGA...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCTCATAAAAACCCCATaGAGAAGACATAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDLIKTP*RRHSQH
Trigger: ATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGGATTCCTACAGAACTaGTTTTTAGAGAGAGCAATA +
Preference number: 2 (lower is better)
Translates to: PILADVATHPRLQGVFMAGFLQN*FLERAI
Trigger: TATTGCTCTCTCTAAAAATCAGTTCTGTAGGAATCC...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGACGAACTGATCAAGTTTaGAGGAACCTTAGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRRTDQV*RNLSSD
Trigger: ATCACTGCTAAGGTTCCTTCAAACTTGATCAGTTCG...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGTCAAATTCCTATCCTTaGAGATGTTGCAACACATCC +
Preference number: 2 (lower is better)
Translates to: QANAKNSNPGNIISKHFLSNSYP*RCCNTS
Trigger: GGATGTGTTGCAACATCTGCAAGGATAGGAATTTGA...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTACTCATAAAAACCCCATaGAGAAGACATAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLLIKTP*RRHSQH
Trigger: ATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAG...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGAAAAAGGGAACTATCCTaGGGCAATCAGAAATATGAG +
Preference number: 2 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRKRELS*GNQKYE
Trigger: CTCATATTTCTGATTGCCTCAGGATAGTTCCCTTTT...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAGCATGCTTAACATACTaGCTAGCATATAGTGAGATT +
Preference number: 2 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLACLTY*LAYSEI
Trigger: AATCTCACTATATGCTAGGCAGTATGTTAAGCATGC...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGTTAGAGAGAGCAATATaGATGCTTAACATACTGCCT +
Preference number: 2 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWLERAI*MLNILP
Trigger: AGGCAGTATGTTAAGCATGCATATTGCTCTCTCTAA...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR GCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTATTAGAGAGAGCAATATaGATGCTTAACATACTGCCT +
Preference number: 2 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLLERAI*MLNILP
Trigger: AGGCAGTATGTTAAGCATGCATATTGCTCTCTCTAA...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CAA 90 bp AACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTaGATACTCATAAAAACCCCATGGAGAAGACATAGCCAACATCAT +
Preference number: 2 (lower is better)
Translates to: NRRTGIHIKKSISTC*ILIKTPWRRHSQHH
Trigger: ATGATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAGTATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR GCA 72 bp CTGGATCGTGGGGCCATATTGTCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCCTGCCATCCGGTGACC +
Preference number: 3 (lower is better)
Translates to: LDRGAILSAVHH*SRWKAACHPVT
Trigger: GGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 72 bp TTCAGCGGTTGGCCCTGTGCACTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGTCCATCACTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: FSGWPCALAPGS*GHIVSSPSLQP
Trigger: CGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 72 bp TCAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCAGAGCACACACAGCTT +
Preference number: 3 (lower is better)
Translates to: SAVHHCSRWKAA*HPVTTSEHTQL
Trigger: AAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 72 bp TTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCTGGATCGTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: LTAVDWVMTFSG*PCALAPGSWGH
Trigger: ATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 72 bp TCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACTaGCAGGGACACCAATCCATGGCCTTGACTGCCGTA +
Preference number: 3 (lower is better)
Translates to: SFIPPPMARTPD*QGHQSMALTAV
Trigger: TACGGCAGTCAAGGCCATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR GCA 72 bp TCCCTGGTTCAAGCAATTCTCCCGGGAGGTGGAGGTTaGCATGAGCCAAGATCACACTACTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: SLVQAILPGGGG*HEPRSHYCTPA
Trigger: GGCTGGAGTGCAGTAGTGTGATCTTGGCTCATGGCAACCTCCACCTCCCGGGAGAATTGCTTGAACCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CCA 72 bp CAGGGACACCAATCCATGGCCTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTG +
Preference number: 3 (lower is better)
Translates to: QGHQSMALTAVD*VMTFSGWPCAL
Trigger: CAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 72 bp TATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGTCAGCAGTCCATCACT +
Preference number: 3 (lower is better)
Translates to: YDFQRLALCTGT*IVGPYCQQSIT
Trigger: AGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CAA 90 bp CACAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTGATCGTGGGGCCATATaGTCAGCAGTCCATCACTGC +
Preference number: 3 (lower is better)
Translates to: HSGTGPHSHIILGSTLTSDRGAI*SAVHHC
Trigger: GCAGTGATGGACTGCTGACAATATGGCCCCACGATC...ACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 72 bp GAAGCACAGAGCAGAATAATCAGGAGGTTCCCTGAGTaGGAGACCAGGATAAGGATGAGACCATCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: EAQSRIIRRFPE*ETRIRMRPSGG
Trigger: CCCTCCTGATGGTCTCATCCTTATCCTGGTCTCCCACTCAGGGAACCTCCTGATTATTCTGCTCTGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CAA 90 bp TGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAACACCAATCCATGGCCTaGACTGCCGTAGACTGGGTT +
Preference number: 3 (lower is better)
Translates to: WDRSTQSHHSWEYLDQLQHQSMA*TAVDWV
Trigger: AACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTG...TTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CAA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACCAGGGTCAAAAGACTTaGGGAGGCCAAGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: WPKTILLPMWPREAKRLDQGQKT*GGQAQW
Trigger: CCACTGTGCTTGGCCTCCCAAAGTCTTTTGACCCTG...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CAA 90 bp GTGTGTGCCTGTAATCCCAAGCTGAGACAGGAGAATCGCTTGAACCCGGGAGACCTGATGAGCAATTACTaGGCTTATGTGGGATCTGTT +
Preference number: 3 (lower is better)
Translates to: VCACNPKLRQENRLNPGDLMSNY*AYVGSV
Trigger: AACAGATCCCACATAAGCCAAGTAATTGCTCATCAG...GTCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCTTGGGATTACAGGCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CCA 72 bp CTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATaGCTACAGAGCTTCCCTGATAACGCTCACAACACC +
Preference number: 3 (lower is better)
Translates to: LEIATGNYLPTA*LQSFPDNAHNT
Trigger: GGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CAA 90 bp GGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATAACAAATCTGTGAGTTaGTGCTTGGGGTCTGGATGC +
Preference number: 3 (lower is better)
Translates to: GTGPHSHIILGSTLTSCNNKSVS*CLGSGC
Trigger: GCATCCAGACCCCAAGCACAAACTCACAGATTTGTT...ATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR TCA 72 bp CAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTTGTCTTAGGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: QVHTVTSFLGVP*PVAISFVLGSQ
Trigger: CTGGCTACCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CCA 72 bp ACACAGTGGGACAGGTCCACACAGTCACATCATTCTTaGGAGTACCTTGACCAGTTGCAATCTCCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: TQWDRSTQSHHS*EYLDQLQSPLS
Trigger: AGACAAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR-3UTR CAA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGGTAATAGGTTGTCCTaGAGAGTTGATGAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: PILADVATHPRLQGVFMAGNRLS*RVDEQG
Trigger: CCCCTGCTCATCAACTCTCAAGGACAACCTATTACC...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR-3UTR CAA 90 bp CATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGCACACACAGCTTGCTaGTGGCGAAGTGTTCCAACA +
Preference number: 3 (lower is better)
Translates to: HLYPRCVSVHPSFLLQWQAHTAC*WRSVPT
Trigger: TGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGC...TTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR TCA 72 bp AAAGTTTCCTACCAGCTTTCGGCAAAGAGGTACACCTaGAAGTTTACAGGGGCTGCCTGCTGTAAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: KVSYQLSAKRYT*KFTGAACCKVS
Trigger: TGAAACCTTACAGCAGGCAGCCCCTGTAAACTTTCAGGTGTACCTCTTTGCCGAAAGCTGGTAGGAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CCA 72 bp TTCTATATGTGGCCCAAAACAATCCTTCTTCCAATGTaGCCCAGGGAAGCCAAAAGATTGGACACCTCTGTA +
Preference number: 3 (lower is better)
Translates to: FYMWPKTILLPM*PREAKRLDTSV
Trigger: TACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCACATATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CAA 90 bp ATCCAAAGTTTCCTACCAGCTTTCGGCAAAGAGGTACACCTGAAAGTTTACAGGATCAACAACAGAGCCTaGCATAGAGTATTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: IQSFLPAFGKEVHLKVYRINNRA*HRVFRG
Trigger: CCCTCTGAATACTCTATGCAAGGCTCTGTTGTTGAT...CCTGTAAACTTTCAGGTGTACCTCTTTGCCGAAAGCTGGTAGGAAACTTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR-3UTR CAA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGTGTTTGGTAATAGGTaGTCCTTGAGAGTTGATGAG +
Preference number: 3 (lower is better)
Translates to: QANAKNSNPGNIISKHFLVFGNR*SLRVDE
Trigger: CTCATCAACTCTCAAGGACAACCTATTACCAAACAC...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CCA 72 bp TCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTaGACACCTCTGTATTTAGAAGTTAAAAGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: SFFQCGPGKPKD*TPLYLEVKSVY
Trigger: ATACACACTTTTAACTTCTAAATACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CCA 72 bp TCATCAGCTATCTTTAGTATTAGTGTATTCTATATGTaGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: SSAIFSISVFYM*PKTILLPMWPR
Trigger: CCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCACATATAGAATACACTAATACTAAAGATAGCTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR TCA 72 bp AACATTCAAAAGACAGAACAGCGAACTGATCAAGTTTaGAGGAACCTTAGCAGTGATCAAATTCCTATCCTT +
Preference number: 3 (lower is better)
Translates to: NIQKTEQRTDQV*RNLSSDQIPIL
Trigger: AAGGATAGGAATTTGATCACTGCTAAGGTTCCTTCAAACTTGATCAGTTCGCTGTTCTGTCTTTTGAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CCA 72 bp AGTATTTCAACTTGTTTGATACTCATAAAAACCCCATaGAGAAGACATAGCCAACATCATCATCTTCACTCA +
Preference number: 3 (lower is better)
Translates to: SISTCLILIKTP*RRHSQHHHLHS
Trigger: TGAGTGAAGATGATGATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAGTATCAAACAAGTTGAAATACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAGTGTTCCAGCATCTCCTCTTCCGTaGGGACCCTCCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PSGDHFRAHTACLWRSVPASPLP*GPSEAR
Trigger: CCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGC...TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAGCCGCTGGAAAGCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTCTTCTCCCTCGCTGGTaGCAACTGCCAGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: QPLESSLPSGDHFRAHTALLPRW*QLPGKF
Trigger: GAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAG...AGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
3UTR CAA 72 bp CTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LDCRRLGYDFQR*ALCTGTWIVGP
Trigger: TGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp GCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGCAAGGACCCCAGACTaGCAGGGACACCAATCCATG +
Preference number: 4 (lower is better)
Translates to: ALTAVDWVMTFSGWPCALARTPD*QGHQSM
Trigger: CATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGC...CAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CCACTGCATGGCTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGCCCTGCCTGGCGTTTaGCCTCTCTGCTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: PLHGYRASLITLTTPPSKALPGV*PLCSTA
Trigger: GGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGC...TTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp GCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCT +
Preference number: 4 (lower is better)
Translates to: AACHPVTTSEHTQLACGEMTFSG*PCALAP
Trigger: AGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT...TTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp TGGATCGTGGGGCCATATTGTCAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGTGGGAGGTAGGTGGTTaGCTGCTCTTCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WIVGPYCQQSITAAAGKQWEVGG*LLFPKG
Trigger: TCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCA...CTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp GCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTGGACGAAGTGTTCCAACATaGTGCTGGGCTACCCGAACA +
Preference number: 4 (lower is better)
Translates to: AVDWVMTFSGWPCALAPGRSVPT*CWATRT
Trigger: TGTTCGGGTAGCCCAGCATCATGTTGGAACACTTCG...TCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGCCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RPCQSTPWICLPELIPEGPSEAR*APVSTP
Trigger: TGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGG...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGCATCTCCTCTTCCGTaGGGACCCTCCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSASPLP*GPSEAR
Trigger: CCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCCGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCRNRNL*GQPLRK
Trigger: TTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCG...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CACAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTCAGCGGTTGGCCCTGTaGACTGGCACCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: HSGTGPHSHIILGSTLTSQRLAL*TGTWIV
Trigger: CACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTG...ACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp GTGTGTGCCTGTAATCCCAAGCTGAGACAGGAGAATCGCTTGAACCCGGGAGACCTGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VCACNPKLRQENRLNPGDLRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCAG...GTCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCTTGGGATTACAGGCACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp ATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGT +
Preference number: 4 (lower is better)
Translates to: MTFSGWPCALAPGSWGHILCTGT*IVGPYC
Trigger: ACAATATGGCCCCACGATCCAGGTGCCAGTGCACAG...AATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp GCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: ALTAVDWVMTFSGWPCALDRALV*LCCHLV
Trigger: CACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTC...CAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSPSEAR*APVSTP
Trigger: TGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATCTCCTCCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RSTQSHHSWEYLDQLQSPPSEAR*APVSTP
Trigger: TGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGG...AGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp ACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGCATCTCCTCTTCCGTaGGGACCCTCCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TPWICLPELIPEGKCSRQASPLP*GPSEAR
Trigger: CCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGC...TTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp GCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAAGAGCACACACAGCTTaGTTGTGGCGAAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: AACHPVTTSEHTQLACGERAHTA*LWRSVP
Trigger: TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCT...TTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGCCCTGCCTGGCGTTTaGCCTCTCTGCTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSALPGV*PLCSTA
Trigger: GGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AAATTGCCACAGGCAATTATCTCCCCACTGCATGGCTACAGAGCTTCCCTGATAGGCGGGTGGAGCATCTaGGGTCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: KLPQAIISPLHGYRASLIGGWSI*GQELET
Trigger: GGTCTCCAACTCCTGACCTCAGATGCTCCACCCGCC...TATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGCATCTCCTCTTCCGTaGGGACCCTCCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGASPLP*GPSEAR
Trigger: CCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCCCTGTGGCCTGACCTaGACACAGTGGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSPCGLT*TQWDRS
Trigger: GGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS-3UTR TCA 90 bp TGGATCGTGGGGCCATATTGTCAGCAGTCCATCACTGCAGCCGCTGGAAAGCAGTCTCTGTCCATTGCATaGGGTGCCTTGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: WIVGPYCQQSITAAAGKQSLSIA*GALQKW
Trigger: CCATTTTTGCAAGGCACCTCATGCAATGGACAGAGA...CTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTTCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGSAVHH*SRWKAA
Trigger: GGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGA...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGCAAGGACCCCAGACTaGCAGGGACACCAATCCATG +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGARTPD*QGHQSM
Trigger: CATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGGACTCAAAGACAGGTaGAGCACTCTGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGGLKDR*STLPLW
Trigger: CCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGCCGGGAGACAGAGGTTaGAGTGAACTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: RPCQSTPWICLPELIPEGPGDRG*SELRSR
Trigger: GCGCGATCTCAGTTCACTGCAACCTCTGTCTCCCGG...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGCCCTGCCTGGCGTTTaGCCTCTCTGCTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGALPGV*PLCSTA
Trigger: GGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGCTTCTGGGAGGTAGGTaGTTGACTGCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PRCVSVHPSFLLQWQGPQLLGGR*LTALPQ
Trigger: TTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAG...CTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCCAGAGCCCAGGGCTATaGCAACAAGATTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCQSPGL*QQDSEN
Trigger: GTTTTCAGAATCTTGTTGCCATAGCCCTGGGCTCTG...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGCACTTCTCCCTCGCTaGTGCCAACTGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSALLPR*CQLPGK
Trigger: CTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QWDRSTQSHHSWEYLDQLLAPGS*GHIVSS
Trigger: ACTGCTGACAATATGGCCCCACGATCCAGGTGCCAG...CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAGTTGGCCCTGTGCACTaGCACCTGGATCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AFISKMCKRPSFIPPPMAVGPVH*HLDRGA
Trigger: GGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAAC...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCTTTGTGCTTGGGGTCTaGATGCTCTTCCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCFVLGV*MLFPAF
Trigger: AAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAA...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp GCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTGGCACCTGGACAGTCACATCATTCTTaGGAGTACCTTGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: AVDWVMTFSGWPCALAPGQSHHS*EYLDQL
Trigger: CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTG...TCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAGTGTTCCAACGTTGGCGGAATCTTaGCTTCTCTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSGDHFRAHTACLWRSVPTLAES*LLFCFK
Trigger: CTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGT...TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACTGGGAGGTAGGTGGTTaGCTGCTCTTCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WPKTILLPMWPREAKRLDWEVGG*LLFPKG
Trigger: TCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCA...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp AGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACAC +
Preference number: 4 (lower is better)
Translates to: RLRNKSVSLCLGSGCSSQQPAIR*PLQSTH
Trigger: GTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTG...CTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGGACAGGAGAATCGCTTaGACCCGGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RPCQSTPWICLPELIPEGDRRIA*TRETEV
Trigger: AACCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGTC...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTCTCGCTGGTGCCAACTaGCAGGCAAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGLAGAN*QASSLF
Trigger: AAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAG...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCAGCGGTTGGCCCTGTaGACTGGCACCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDQRLAL*TGTWIV
Trigger: CACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGTTGGCCCTGTGCACTaGCACCTGGATCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAVGPVH*HLDRGA
Trigger: GGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAAC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGTTGGCCCTGTGCACTaGCACCTGGATCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWVGPVH*HLDRGA
Trigger: GGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAAC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCCCAACTACTGACAAATaGCCAAGCATATTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCPTTDK*PSIFLS
Trigger: GCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGG...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTCTGCTGAGGATAAAGTaGTTCCAGCTCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGLLRIK*FQLRAP
Trigger: TGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAG...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACAC +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDQPAIR*PLQSTH
Trigger: GTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACAC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQPAIR*PLQSTH
Trigger: GTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAACACGCCCCAGTCTTaGCCCACCAGGCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: AFISKMCKRPSFIPPPMANTPQS*PTRHGG
Trigger: ACCACCATGCCTGGTGGGTCAAGACTGGGGCGTGTT...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGTTTCCTACCAGGCGTTTGGCCTCTCTaGTCGACTGCCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LQSFPDNAHNTTIQSFLPGVWPL*STASGF
Trigger: AAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCC...TGGTAGGAAACTTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCGGCTGACTTCGCCCTaGCTGGCGTTTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWRLTSP*LAFGLS
Trigger: AGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGPSEAR*APVSTP
Trigger: TGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGACCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRPSEAR*APVSTP
Trigger: TGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGG...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GTGTGTGCCTGTAATCCCAAGCTGAGACAGGAGAATCGCTTGAACCCGGGAGACGATTGCTCACAGAGCTaGATTTTTCCATTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VCACNPKLRQENRLNPGDDCSQS*IFPLAC
Trigger: GCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATC...GTCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCTTGGGATTACAGGCACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp AGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGCATTTACGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCA +
Preference number: 4 (lower is better)
Translates to: RNKSVSLCLGSGCSSQHLRWKAA*HPVTTS
Trigger: TGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCG...TAAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCAGCGGTTGGCCCTGTaGACTGGCACCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAQRLAL*TGTWIV
Trigger: CACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCAGCGGTTGGCCCTGTaGACTGGCACCTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWQRLAL*TGTWIV
Trigger: CACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCAGTACCTTGACCAGTTaGAATCTCCTTTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCSTLTS*NLLCLR
Trigger: CCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACT...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGACAGGTGCAGCACTCTaGCCCTGTGGCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLTGAAL*PCGLTW
Trigger: CCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGGCCGTCCCATCAGCTaGAGCAGAAAACACCCGGGT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGGRPIS*SRKHPG
Trigger: ACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCCCTGCCTGGCGTTTaGCCTCTCTGCTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGALPGV*PLCSTA
Trigger: GGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATGCACTTCTCCCTCGCTaGTGCCAACTGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDALLPR*CQLPGK
Trigger: CTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGC...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAGCACTTCTCCCTCGCTaGTGCCAACTGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AFISKMCKRPSFIPPPMAALLPR*CQLPGK
Trigger: CTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGC...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCATCACTGCAGCCGCTaGAAAGCAGCCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGHHCSR*KAACHP
Trigger: CGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCTCATTCCTCCTCCAATaGCAAGGACCCCAGACTGCC +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSSFLLQ*QGPQTA
Trigger: GGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGA...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCTCATTCCTCCTCCAATaGCAAGGACCCCAGACTGCC +
Preference number: 4 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSSFLLQ*QGPQTA
Trigger: GGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGA...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWDRALV*LCCHLV
Trigger: CACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTC...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCGGTGTCTTCAGCACTaGTCCGGAAGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGRCLQH*SGSFWE
Trigger: CTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGGCATTTCTGCCCTTTTaGGGCAACACTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRCVSVHPSFLLQWQGPQAFLPF*GNTFFP
Trigger: TGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGC...CTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCTGCTGAGGATAAAGTaGTTCCAGCTCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSLLRIK*FQLRAP
Trigger: TGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAG...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCGAAGTGTTCCAACATaGTGCTGGGCTACCCGAACA +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSRSVPT*CWATRT
Trigger: TGTTCGGGTAGCCCAGCATCATGTTGGAACACTTCG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCAGCCTGCCATCCGGTaGCCACTTCAGAGCACACAC +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWQPAIR*PLQSTH
Trigger: GTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGATCTGCCCCTGTGGCCTaGCCTGGACACAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRSAPVA*PGHSGT
Trigger: TGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGA...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS-3UTR TCA 90 bp AACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACACCTCTGTGCAAAGAGGTACACCTaGAAGTTTACAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NNPSSNVAQGSQKIGHLCAKRYT*KFTGAA
Trigger: GGCAGCCCCTGTAAACTTTCAGGTGTACCTCTTTGC...ACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp AACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACACCTCTGTAGGTGGAGGTTGCCATaGGCCAAGATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: NNPSSNVAQGSQKIGHLCRWRLP*AKITLL
Trigger: CAGTAGTGTGATCTTGGCTCATGGCAACCTCCACCT...ACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGAGGTGGAGGTTGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: FISKMCKRPSFIPPPMARRWRLQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCAACCTCCACCT...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp AGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGCATTTACTCGCTGGTGCCAACTaGCAGGCAAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RNKSVSLCLGSGCSSQHLLAGAN*QASSLF
Trigger: AAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAG...TAAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGSAVHH*SRWKAA
Trigger: GGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCATCAGCAGTCCATCACTaGAGCCGCTGGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMASAVHH*SRWKAA
Trigger: GGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGA...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGGCCGTCCCATCAGCTaGAGCAGAAAACACCCGGGT +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWGRPIS*SRKHPG
Trigger: ACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACCAATTATCTCCCCACTaGATGGCTACAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WPKTILLPMWPREAKRLDQLSPH*MATELP
Trigger: GGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTG...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGCCAAGATCACACTACTaGACTCCAGCCTGGACGATA +
Preference number: 4 (lower is better)
Translates to: RPCQSTPWICLPELIPEGPRSHY*TPAWTI
Trigger: TATCGTCCAGGCTGGAGTGCAGTAGTGTGATCTTGG...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp GCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAATCTTCACCTCTGGTTaGAGTATGGAATCGTTTATA +
Preference number: 4 (lower is better)
Translates to: AACHPVTTSEHTQLACGEIFTSG*SMESFI
Trigger: TATAAACGATTCCATACTCCAACCAGAGGTGAAGAT...TTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCATCACTGCAGCCGCTaGAAAGCAGCCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWHHCSR*KAACHP
Trigger: CGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCATCACTGCAGCCGCTaGAAAGCAGCCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAHHCSR*KAACHP
Trigger: CGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGCTGACCTGGACACAGTaGGACAGGTCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: RLRNKSVSLCLGSGCSSQLTWTQ*DRSTQS
Trigger: TGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAG...CTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGAGGGTCAAAAGACTTTaGGAGGCCAAGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWRVKRL*EAKHSG
Trigger: GCCACTGTGCTTGGCCTCCCAAAGTCTTTTGACCCT...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTACGTTGGCGGAATCTTaGCTTCTCTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGTLAES*LLFCFK
Trigger: CTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGT...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTGGGAGGTAGGTGGTTaGCTGCTCTTCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDWEVGG*LLFPKG
Trigger: TCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCGGTGTCTTCAGCACTaGTCCGGAAGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWRCLQH*SGSFWE
Trigger: CTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGCGGTGTCTTCAGCACTaGTCCGGAAGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLRCLQH*SGSFWE
Trigger: CTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCG...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp ACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTACGGTGTCTTCAGCACTaGTCCGGAAGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLVLSRGFSHRILAPKQLRCLQH*SGSFWE
Trigger: CTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCG...TAATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAACGGTGTCTTCAGCACTaGTCCGGAAGCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HLYPRCVSVHPSFLLQWQRCLQH*SGSFWE
Trigger: CTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCG...TTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CCACTGCATGGCTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGCATTTCTGCCCTTTTaGGGCAACACTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLHGYRASLITLTTPPSKAFLPF*GNTFFP
Trigger: TGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGC...TTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp GGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATTTTCCATTAGCCTGCTaGACCACGTTCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: GTGPHSHIILGSTLTSCNFPLAC*TTFWVT
Trigger: TGTAACCCAGAACGTGGTTCAGCAGGCTAATGGAAA...ATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCGAAGACCAGTAATATaGATCTTCACCTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QWDRSTQSHHSWEYLDQLRRPVI*IFTSGW
Trigger: CCAACCAGAGGTGAAGATTCATATTACTGGTCTTCG...CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp AAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACCAGAGCCCCAACTACTaGCAAATGACCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: KMCKRPSFIPPPMARTPDQSPNY*QMTKHI
Trigger: AATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTG...GTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTCAGGCACACAGGATGTaGCTAGGTGAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGQAHRM*LGEAKE
Trigger: TTCTTTTGCTTCACCTAGTCACATCCTGTGTGCCTG...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGAGGACTCCAGAGGTTaGGGTCAAAGGTGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSEDSRG*GQRCLV
Trigger: TACCAAACACCTTTGACCTCAACCTCTGGAGTCCTC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATGGCGTTTGGCCTCTCTaGTCGACTGCCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDGVWPL*STASGF
Trigger: AAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCC...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMARNRNL*GQPLRK
Trigger: TTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTCGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: HASSLKRILTQNSGSQTIRNRNL*GQPLRK
Trigger: TTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCG...AATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp GTGTGTGCCTGTAATCCCAAGCTGAGACAGGAGAATCGCTTGAACCCGGGAGACTTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: VCACNPKLRQENRLNPGDFQKFL*WGSSVV
Trigger: AACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAA...GTCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCTTGGGATTACAGGCACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp GTGTGTGCCTGTAATCCCAAGCTGAGACAGGAGAATCGCTTGAACCCGGGAGACTGTTTTAGGCATTTCTaGCCTTTTGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: VCACNPKLRQENRLNPGDCFRHF*PFEATL
Trigger: AAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACA...GTCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCTTGGGATTACAGGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACTCGCTGGTGCCAACTaGCAGGCAAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMALAGAN*QASSLF
Trigger: AAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCTCGCTGGTGCCAACTaGCAGGCAAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGLAGAN*QASSLF
Trigger: AAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCA +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWRWKAA*HPVTTS
Trigger: TGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGARWKAA*HPVTTS
Trigger: TGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGCGCTGGAAAGCAGCCTaGCATCCGGTGACCACTTCA +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLRWKAA*HPVTTS
Trigger: TGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCG...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATCTCCTATCCATGGCCTTGACTaGCGTAGACTGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: RSTQSHHSWEYLDQLQSPIHGLD*RRLGYD
Trigger: GTCATAACCCAGTCTACGGCAGTCAAGGCCATGGAT...AGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGACTCAAAGACAGGTaGAGCACTCTGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAGLKDR*STLPLW
Trigger: CCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCACTTCTCCCTCGCTaGTGCCAACTGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGALLPR*CQLPGK
Trigger: CTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMALAPGS*GHIVSS
Trigger: ACTGCTGACAATATGGCCCCACGATCCAGGTGCCAG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACTGTGCACTGGCACCTaGATCGTGGGGCCATATTGT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMALCTGT*IVGPYC
Trigger: ACAATATGGCCCCACGATCCAGGTGCCAGTGCACAG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAATCATTCCTCCTCCAATaGCAAGGACCCCAGACTGCC +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQSFLLQ*QGPQTA
Trigger: GGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGA...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCTGACCTGGACACAGTaGGACAGGTCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDLTWTQ*DRSTQS
Trigger: TGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAACTGACCTGGACACAGTaGGACAGGTCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQLTWTQ*DRSTQS
Trigger: TGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAG...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGTTTCCTACCATATCTCCCCACTGCATaGCTACAGAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: LQSFPDNAHNTTIQSFLPYLPTA*LQSFPD
Trigger: ATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATA...TGGTAGGAAACTTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
3UTR CAA 72 bp AGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTaGAGAGTTGATGAGCAGGGGACTGAGAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: RLRSKVFGNRLS*RVDEQGTERIS
Trigger: GCTGATCCTCTCAGTCCCCTGCTCATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp ACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGGTCTAAGTCAGTCTTaGCGCCTAATCGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: TPWICLPELIPEGKCSRQGLSQS*RLIVKP
Trigger: GGGTTTGACGATTAGGCGTCAAGACTGACTTAGACC...TTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp TGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAAATACGTAGCATTAACTaGATCGAGTACGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: WDRSTQSHHSWEYLDQLQIRSIN*IEYVGG
Trigger: TCCGCCAACGTACTCGATTCAGTTAATGCTACGTAT...TTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGDRALV*LCCHLV
Trigger: CACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTGGGAGGTAGGTGGTTaGCTGCTCTTCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAWEVGG*LLFPKG
Trigger: TCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCTTTCCATTAGCCTGCTaGACCACGTTCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSFPLAC*TTFWVT
Trigger: TGTAACCCAGAACGTGGTTCAGCAGGCTAATGGAAA...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGTTTCCTACCATTTCCATTAGCCTGCTaGACCACGTTCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: LQSFPDNAHNTTIQSFLPFPLAC*TTFWVT
Trigger: TGTAACCCAGAACGTGGTTCAGCAGGCTAATGGAAA...TGGTAGGAAACTTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCTGCTGAGGATAAAGTaGTTCCAGCTCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGLLRIK*FQLRAP
Trigger: TGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGAACACGCCCCAGTCTTaGCCCACTGCTGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGNTPQS*PTAEDK
Trigger: TTTATCCTCAGCAGTGGGTCAAGACTGGGGCGTGTT...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAAACACGCCCCAGTCTTaGCCCACTGCTGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMANTPQS*PTAEDK
Trigger: TTTATCCTCAGCAGTGGGTCAAGACTGGGGCGTGTT...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCGAAGTGTTCCAACATaGTGCTGGGCTACCCGAACA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGRSVPT*CWATRT
Trigger: TGTTCGGGTAGCCCAGCATCATGTTGGAACACTTCG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGGCGTTTGGCCTCTCTaGTCGACTGCCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWGVWPL*STASGF
Trigger: AAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CCAGGGACACCAATCCATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGTGTTTTAGGCATTTCTaGCCTTTTGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: PGTPIHGLDCRRLGYDFQCFRHF*PFEATL
Trigger: AAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACA...CTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGATTGCTCACAGAGCTaGATTTTTCCATTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGDCSQS*IFPLAC
Trigger: GCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCTTCTCCCTCGCTGGTaGCAACTGCCAGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGLLPRW*QLPGKF
Trigger: GAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTTGCTTGGGGTCTGGATaGTCTTCCCAGCATTTATAT +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGCLGSG*SSQHLY
Trigger: ATATAAATGCTGGGAAGAGCATCCAGACCCCAAGCA...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATAAATCTGTGAGTTTGTaGTTGGGGTCTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: GTGPHSHIILGSTLTSCNKSVSL*LGSGCS
Trigger: AGAGCATCCAGACCCCAAGCACAAACTCACAGATTT...ATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGGACTCAAAGACAGGTaGAGCACTCTGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGGLKDR*STLPLW
Trigger: CCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp AAATTGCCACAGGCAATTATCTCCCCACTGCATGGCTACAGAGCTTCCCTGATATTTACAGGGGCTGCCTaGTGTAAGGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KLPQAIISPLHGYRASLIFTGAA*CKVSES
Trigger: TGACTCTGAAACCTTACAGCAGGCAGCCCCTGTAAA...TATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCTTCTGGGAGGTAGGTaGTTGACTGCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDLLGGR*LTALPQ
Trigger: TTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp ATCCAAAGTTTCCTACCAGCTTTCGGCAAAGAGGTACACCTGAAAGTTTACAGGCTTCTGGGAGGTAGGTaGTTGACTGCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: IQSFLPAFGKEVHLKVYRLLGGR*LTALPQ
Trigger: TTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAG...CCTGTAAACTTTCAGGTGTACCTCTTTGCCGAAAGCTGGTAGGAAACTTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp AAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACCCTCTGGTTGGAGTATaGAATCGTTTATATCACCAG +
Preference number: 4 (lower is better)
Translates to: KMCKRPSFIPPPMARTPDPLVGV*NRLYHQ
Trigger: CTGGTGATATAAACGATTCCATACTCCAACCAGAGG...GTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGALAPGS*GHIVSS
Trigger: ACTGCTGACAATATGGCCCCACGATCCAGGTGCCAG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGALCTGT*IVGPYC
Trigger: ACAATATGGCCCCACGATCCAGGTGCCAGTGCACAG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAAGTTGGCCCTGTGCACTaGCACCTGGATCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREVGPVH*HLDRGA
Trigger: GGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAAC...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWMTFSG*PCALAP
Trigger: AGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAMTFSG*PCALAP
Trigger: AGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGAAAACACCCGGGTCTaGTCTGGACTCAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGENTRV*SGLKDR
Trigger: CCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAAGGAGGTTCCCTGAGTaGGAGACCAGGATAAGGATG +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMARRFPE*ETRIRM
Trigger: CATCCTTATCCTGGTCTCCCACTCAGGGAACCTCCT...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCCTAACTTCAAGTCCTaGGCTGAGGACTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGPNFKS*AEDSRG
Trigger: ACCTCTGGAGTCCTCAGCCCAGGACTTGAAGTTAGG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCCTAACTTCAAGTCCTaGGCTGAGGACTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDPNFKS*AEDSRG
Trigger: ACCTCTGGAGTCCTCAGCCCAGGACTTGAAGTTAGG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTAAAACCCACCTGACCTaGACACAGTGGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAKTHLT*TQWDRS
Trigger: GGACCTGTCCCACTGTGTCCAGGTCAGGTGGGTTTT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGTGCCAAAGCACCCCATaGATATGCTTACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: RPCQSTPWICLPELIPEGCQSTP*ICLPEL
Trigger: AAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCA...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGGTCTAAGTCAGTCTTaGCGCCTAATCGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGGLSQS*RLIVKP
Trigger: GGGTTTGACGATTAGGCGTCAAGACTGACTTAGACC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGAACACGCCCCAGTCTTaGCCCACTGCTGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLNTPQS*PTAEDK
Trigger: TTTATCCTCAGCAGTGGGTCAAGACTGGGGCGTGTT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCAAAGGGTGAACTaGGGAAGCACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMAEQRVN*GSTEQN
Trigger: ATTCTGCTCTGTGCTTCCTCAGTTCACCCTTTGCTC...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGACAGAACAGCGAACTaGTCAAGTTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSDRTAN*SSLKEP
Trigger: AGGTTCCTTCAAACTTGATCAGTTCGCTGTTCTGTC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGGCGTTTGGCCTCTCTaGTCGACTGCCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGGVWPL*STASGF
Trigger: AAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGRNRNL*GQPLRK
Trigger: TTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATATCCATGGCCTTGACTaGCGTAGACTGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDIHGLD*RRLGYD
Trigger: GTCATAACCCAGTCTACGGCAGTCAAGGCCATGGAT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCTTCTGGGAGGTAGGTaGTTGACTGCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGALLGGR*LTALPQ
Trigger: TTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp TGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAACAGAAATTCCTTTGCTaGGGGTCTTCAGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WDRSTQSHHSWEYLDQLQQKFLC*GSSVVL
Trigger: AAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTG...TTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGMTFSG*PCALAP
Trigger: AGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCAT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RLRNKSVSLCLGSGCSSQLTAVD*VMTFSG
Trigger: ACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA...CTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCAGTCACATCATTCTTaGGAGTACCTTGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSQSHHS*EYLDQL
Trigger: CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCTGACCTGGACACAGTaGGACAGGTCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGLTWTQ*DRSTQS
Trigger: TGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATAGCACTCTGCCCCTGTaGCCTGACCTGGACACAGTG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDSTLPL*PDLDTV
Trigger: CACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS-3UTR TCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAGGTCTAAGTCAGTCTTaGCGCCTAATCGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLGLSQS*RLIVKP
Trigger: GGGTTTGACGATTAGGCGTCAAGACTGACTTAGACC...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTGGAGAGCACACGCATaGTACTTTCCCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAWRAHA*YFPTAS
Trigger: AGATGCTGTGGGAAAGTATCATGCGTGTGCTCTCCA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGACGTTGGCGGAATCTTaGCTTCTCTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGTLAES*LLFCFK
Trigger: CTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGT...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAACGTTGGCGGAATCTTaGCTTCTCTTCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQTLAES*LLFCFK
Trigger: CTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGT...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGDRALV*LCCHLV
Trigger: CACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTTCTCTGTCCATTGCATaGGGTGCCTTGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: HASSLKRILTQNSGSQTISLSIA*GALQKW
Trigger: CCATTTTTGCAAGGCACCTCATGCAATGGACAGAGA...AATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGATGGCAACAAGATTCTaGAAACTCCAATCTAGGATA +
Preference number: 4 (lower is better)
Translates to: QWDRSTQSHHSWEYLDQLMATRF*KLQSRI
Trigger: TATCCTAGATTGGAGTTTTCAGAATCTTGTTGCCAT...CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGAGGCAATCAGAAATATaGGGTTTGGAGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGRQSEI*GLELGR
Trigger: TCTCCCCAGCTCCAAACCTCATATTTCTGATTGCCT...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGGCACACAGGATGTaGCTAGGTGAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQAHRM*LGEAKE
Trigger: TTCTTTTGCTTCACCTAGTCACATCCTGTGTGCCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGATACGTAGCATTAACTaGATCGAGTACCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWIRSIN*IEYPQH
Trigger: ATGCTGTGGGTACTCGATTCAGTTAATGCTACGTAT...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTGTCTGGCCAACATGGTaGAACCCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HASSLKRILTQNSGSQTIVWPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGGTTTCACCATGTTGGCCAGAC...AATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp AAATTGCCACAGGCAATTATCTCCCCACTGCATGGCTACAGAGCTTCCCTGATAACACAAAAACGTCCATaGTGGCAACAGAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KLPQAIISPLHGYRASLITQKRP*WQQKVG
Trigger: TCCTACTTTCTGTTGCCATCATGGACGTTTTTGTGT...TATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTTGTTTTAGGCATTTCTaGCCTTTTGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGCFRHF*PFEATL
Trigger: AAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACA...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTAGAGCACACACAGCTTaGTTGTGGCGAAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGARAHTA*LWRSVP
Trigger: TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATGCAAGGACCCCAGACTaGCAGGGACACCAATCCATG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDARTPD*QGHQSM
Trigger: CATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGC...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCAGTACCTTGACCAGTTaGAATCTCCTTTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSSTLTS*NLLCLR
Trigger: CCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACT...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAAGGCCGTCCCATCAGCTaGAGCAGAAAACACCCGGGT +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREGRPIS*SRKHPG
Trigger: ACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCC...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGACTTCTGGGAGGTAGGTaGTTGACTGCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRLLGGR*LTALPQ
Trigger: TTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAG...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCAGAAATTCCTTTGCTaGGGGTCTTCAGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSQKFLC*GSSVVL
Trigger: AAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGAGCCCAGGGCTATaGCAACAAGATTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQSPGL*QQDSEN
Trigger: GTTTTCAGAATCTTGTTGCCATAGCCCTGGGCTCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCTTTTCAATCCCATTGTaGTTCTCCCCATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSFSIPL*FSPFQM
Trigger: CATCTGGAATGGGGAGAACCACAATGGGATTGAAAA...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCATTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMALTAVD*VMTFSG
Trigger: ACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCATTTGTGCTTGGGGTCTaGATGCTCTTCCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMAFVLGV*MLFPAF
Trigger: AAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAA...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTATGAGGTTTGGAGCTaGGGAGAAAAGTCATACGGG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDYEVWS*GEKSYG
Trigger: CCCGTATGACTTTTCTCCCCAGCTCCAAACCTCATA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAAACCTAGCAGTGGTGTaGAGTCAAGAGGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: PILADVATHPRLQGVFMANLAVV*SQEDQF
Trigger: GAACTGATCCTCTTGACTCCACACCACTGCTAGGTT...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGGTCTAAGTCAGTCTTaGCGCCTAATCGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGGLSQS*RLIVKP
Trigger: GGGTTTGACGATTAGGCGTCAAGACTGACTTAGACC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATATACGTAGCATTAACTaGATCGAGTACGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDIRSIN*IEYVGG
Trigger: TCCGCCAACGTACTCGATTCAGTTAATGCTACGTAT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTGGGAGGTAGGTGGTTaGCTGCTCTTCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDWEVGG*LLFPKG
Trigger: TCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTCTCTGTCCATTGCATaGGGTGCCTTGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGASLSIA*GALQKW
Trigger: CCATTTTTGCAAGGCACCTCATGCAATGGACAGAGA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGCATTTCTGCCCTTTTaGGGCAACACTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGAFLPF*GNTFFP
Trigger: TGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTTTCCATTAGCCTGCTaGACCACGTTCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAFPLAC*TTFWVT
Trigger: TGTAACCCAGAACGTGGTTCAGCAGGCTAATGGAAA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCGAAGACCAGTAATATaGATCTTCACCTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGRRPVI*IFTSGW
Trigger: CCAACCAGAGGTGAAGATTCATATTACTGGTCTTCG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCGAAGACCAGTAATATaGATCTTCACCTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDRRPVI*IFTSGW
Trigger: CCAACCAGAGGTGAAGATTCATATTACTGGTCTTCG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTATGGCAACAAGATTCTaGAAACTCCAATCTAGGATA +
Preference number: 4 (lower is better)
Translates to: QGTERISTGLLDVQPSSGMATRF*KLQSRI
Trigger: TATCCTAGATTGGAGTTTTCAGAATCTTGTTGCCAT...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGAGCCCCAACTACTaGCAAATGACCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQSPNY*QMTKHI
Trigger: AATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDFLGVP*PVAISF
Trigger: AAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGAGGCAATCAGAAATATaGGGTTTGGAGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLRQSEI*GLELGR
Trigger: TCTCCCCAGCTCCAAACCTCATATTTCTGATTGCCT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGAGCAAAGGGTGAACTaGGGAAGCACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGEQRVN*GSTEQN
Trigger: ATTCTGCTCTGTGCTTCCTCAGTTCACCCTTTGCTC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGAGAGGACTCCAGAGGTTaGGGTCAAAGGTGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWREDSRG*GQRCLV
Trigger: TACCAAACACCTTTGACCTCAACCTCTGGAGTCCTC...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGATTGCTCACAGAGCTaGATTTTTCCATTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGDCSQS*IFPLAC
Trigger: GCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGGATTGCTCACAGAGCTaGATTTTTCCATTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FISKMCKRPSFIPPPMARDCSQS*IFPLAC
Trigger: GCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATC...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGCAAACACATTCGGATTaGTCACAGAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWQTHSD*SQSCIF
Trigger: AAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTG...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACTTCTCCCTCGCTGGTaGCAACTGCCAGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKRELLPRW*QLPGKF
Trigger: GAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCCTTCTCCCTCGCTGGTaGCAACTGCCAGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLLLPRW*QLPGKF
Trigger: GAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAG...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGAGAGCACACACAGCTTaGTTGTGGCGAAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGRAHTA*LWRSVP
Trigger: TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGAATCCATGGCCTTGACTaGCGTAGACTGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRIHGLD*RRLGYD
Trigger: GTCATAACCCAGTCTACGGCAGTCAAGGCCATGGAT...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAATGCTTGGGGTCTGGATaGTCTTCCCAGCATTTATAT +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQCLGSG*SSQHLY
Trigger: ATATAAATGCTGGGAAGAGCATCCAGACCCCAAGCA...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGTGCTTGGGGTCTGGATaGTCTTCCCAGCATTTATAT +
Preference number: 4 (lower is better)
Translates to: FISKMCKRPSFIPPPMARCLGSG*SSQHLY
Trigger: ATATAAATGCTGGGAAGAGCATCCAGACCCCAAGCA...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp ATCCAAAGTTTCCTACCAGCTTTCGGCAAAGAGGTACACCTGAAAGTTTACAGGTCAACAACAGAGCCTTaGATAGAGTATTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IQSFLPAFGKEVHLKVYRSTTEP*IEYSEG
Trigger: GCCCTCTGAATACTCTATGCAAGGCTCTGTTGTTGA...CCTGTAAACTTTCAGGTGTACCTCTTTGCCGAAAGCTGGTAGGAAACTTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp AAATTGCCACAGGCAATTATCTCCCCACTGCATGGCTACAGAGCTTCCCTGATATTATTTTTGAGACCTTaGCAAAGCACCCCATGGATA +
Preference number: 4 (lower is better)
Translates to: KLPQAIISPLHGYRASLILFLRP*QSTPWI
Trigger: TATCCATGGGGTGCTTTGGCAAGGTCTCAAAAATAA...TATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCAGAGCCCAGGGCTATaGCAACAAGATTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAQSPGL*QQDSEN
Trigger: GTTTTCAGAATCTTGTTGCCATAGCCCTGGGCTCTG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATCTGTGCACTGGCACCTaGATCGTGGGGCCATATTGT +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDLCTGT*IVGPYC
Trigger: ACAATATGGCCCCACGATCCAGGTGCCAGTGCACAG...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGALTAVD*VMTFSG
Trigger: ACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCAGTCACATCATTCTTaGGAGTACCTTGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDQSHHS*EYLDQL
Trigger: CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATAAAACCCACCTGACCTaGACACAGTGGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDKTHLT*TQWDRS
Trigger: GGACCTGTCCCACTGTGTCCAGGTCAGGTGGGTTTT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381375.7
CDS-3UTR CCA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTAATCCTTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLILLPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGAT...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTATACGTAGCATTAACTaGATCGAGTACGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAIRSIN*IEYVGG
Trigger: TCCGCCAACGTACTCGATTCAGTTAATGCTACGTAT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGCATTTCTGCCCTTTTaGGGCAACACTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWAFLPF*GNTFFP
Trigger: TGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATAATCAGGAGGTTCCCTaGGTGGGAGACCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDNQEVP*VGDQDK
Trigger: CTTATCCTGGTCTCCCACTCAGGGAACCTCCTGATT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAACGAACTGATCAAGTTTaGAGGAACCTTAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQRTDQV*RNLSSD
Trigger: ATCACTGCTAAGGTTCCTTCAAACTTGATCAGTTCG...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGACAGAACAGCGAACTaGTCAAGTTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGADRTAN*SSLKEP
Trigger: AGGTTCCTTCAAACTTGATCAGTTCGCTGTTCTGTC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAAAATCTGTGAGTTTGTaGTTGGGGTCTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLKSVSL*LGSGCS
Trigger: AGAGCATCCAGACCCCAAGCACAAACTCACAGATTT...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATAGTACCTTGACCAGTTaGAATCTCCTTTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDSTLTS*NLLCLR
Trigger: CCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGAAATTCCTTTGCTaGGGGTCTTCAGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQKFLC*GSSVVL
Trigger: AAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGATGAATCTTCACCTCTaGTTGGAGTATGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: RLRNKSVSLCLGSGCSSQMNLHL*LEYGIV
Trigger: AACGATTCCATACTCCAACCAGAGGTGAAGATTCAT...CTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTTTTCAATCCCATTGTaGTTCTCCCCATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGFSIPL*FSPFQM
Trigger: CATCTGGAATGGGGAGAACCACAATGGGATTGAAAA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACTGGCACCTGGATCGTaGGGCCATATTGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKRELAPGS*GHIVSS
Trigger: ACTGCTGACAATATGGCCCCACGATCCAGGTGCCAG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGLTAVD*VMTFSG
Trigger: ACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGATTTGTGCTTGGGGTCTaGATGCTCTTCCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRFVLGV*MLFPAF
Trigger: AAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAA...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGAAAGAAGCGGATCTCTaGGAAGCAGAGCAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLKEADL*EAEQVK
Trigger: CTTTACTTGCTCTGCTTCCCAGAGATCCGCTTCTTT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp ATTTTTGAGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCATAATCTCAGTATTTTaGAAGGCTGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IFETLPKHPMDMLTRTYSIISVF*KAEAGG
Trigger: TCCACCCGCCTCAGCCTTCCAAAATACTGAGATTAT...GGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCTCAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCATTTCTGCCCTTTTaGGGCAACACTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGAFLPF*GNTFFP
Trigger: TGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGCCAACTACTGACAAATaGCCAAGCATATTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLPTTDK*PSIFLS
Trigger: GCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGG...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCCAACTACTGACAAATaGCCAAGCATATTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAPTTDK*PSIFLS
Trigger: GCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCAGAGCCCCAACTACTaGCAAATGACCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGQSPNY*QMTKHI
Trigger: AATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGACAGAGCCCCAACTACTaGCAAATGACCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRQSPNY*QMTKHI
Trigger: AATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTG...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACGAAGTGTTCCAACATaGTGCTGGGCTACCCGAACA +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKRERSVPT*CWATRT
Trigger: TGTTCGGGTAGCCCAGCATCATGTTGGAACACTTCG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGATTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRFLGVP*PVAISF
Trigger: AAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAA...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGFLGVP*PVAISF
Trigger: AAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR TCA 90 bp GCAATCTCCTTTGTCTTAGGTAGCCAGATTAAGGAACAAATCTGTGAGTTTGTGTTCTTGGGAGTACCTTaGCCAGTTGCAATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AISFVLGSQIKEQICEFVFLGVP*PVAISF
Trigger: AAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAA...CACAAACTCACAGATTTGTTCCTTAATCTGGCTACCTAAGACAAAGGAGATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR TCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAAAAAGGGAACTATCCTaGGGCAATCAGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQKRELS*GNQKYE
Trigger: CTCATATTTCTGATTGCCTCAGGATAGTTCCCTTTT...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAAAATCAGGAGGTTCCCTaGGTGGGAGACCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKRENQEVP*VGDQDK
Trigger: CTTATCCTGGTCTCCCACTCAGGGAACCTCCTGATT...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGCGAACTGATCAAGTTTaGAGGAACCTTAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLRTDQV*RNLSSD
Trigger: ATCACTGCTAAGGTTCCTTCAAACTTGATCAGTTCG...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGFQKFL*WGSSVV
Trigger: AACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATCAAACACATTCGGATTaGTCACAGAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDQTHSD*SQSCIF
Trigger: AAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTG...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTAGTACCTTGACCAGTTaGAATCTCCTTTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGASTLTS*NLLCLR
Trigger: CCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTATCCTTGCAGATGTTaGAACACATCCAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDYPCRC*NTSKVT
Trigger: TGTAACCTTGGATGTGTTGCAACATCTGCAAGGATA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTCAAATTCCTATCCTTaGAGATGTTGCAACACATCC +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDSNSYP*RCCNTS
Trigger: GGATGTGTTGCAACATCTGCAAGGATAGGAATTTGA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGGAACAAATCTTGACTaGCGTAGACTGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGGTNLD*RRLGYD
Trigger: GTCATAACCCAGTCTACGGCAGTCAAGATTTGTTCC...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322374.10
CDS-3UTR GCA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTACTCTCAATTAGTCTTTaGCACCAACATCCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLLSISL*HQHPPV
Trigger: AACAGGAGGATGTTGGTGGCAAAGACTAATTGAGAG...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR GCA 90 bp ATTTTTGAGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGCACCCCATGGATATaGTTACCAGAACTTATTCCA +
Preference number: 4 (lower is better)
Translates to: IFETLPKHPMDMLTRTYSSTPWI*LPELIP
Trigger: TGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCT...GGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCTCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCTGAATCGAGTACGTTaGCGGAATCTTGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGLNRVR*RNLDFS
Trigger: AGAGAAGTCAAGATTCCGCCAACGTACTCGATTCAG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTACAGAAATTCCTTTGCTaGGGGTCTTCAGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLQKFLC*GSSVVL
Trigger: AAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTG...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCAGTCACATCATTCTTaGGAGTACCTTGACCAGTTG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGQSHHS*EYLDQL
Trigger: CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCTCATAAAAACCCCATaGAGAAGACATAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGLIKTP*RRHSQH
Trigger: ATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACACCTCTGTAGTGTATTCTATATGTaGCCCAAAACAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NNPSSNVAQGSQKIGHLCSVFYM*PKTILL
Trigger: AAGAAGGATTGTTTTGGGCCACATATAGAATACACT...ACAGAGGTGTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTCTCTGTCCATTGCATaGGGTGCCTTGCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDSLSIA*GALQKW
Trigger: CCATTTTTGCAAGGCACCTCATGCAATGGACAGAGA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATGGATTCCTACAGAACTaGTTTTTAGAGAGAGCAATA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDGFLQN*FLERAI
Trigger: TATTGCTCTCTCTAAAAATCAGTTCTGTAGGAATCC...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGTGTTTTAGGCATTTCTaGCCTTTTGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLCFRHF*PFEATL
Trigger: AAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACA...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAGAGCACACACAGCTTaGTTGTGGCGAAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLRAHTA*LWRSVP
Trigger: TGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCT...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAATTAGAGAGAGCAATATaGATGCTTAACATACTGCCT +
Preference number: 4 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQLERAI*MLNILP
Trigger: AGGCAGTATGTTAAGCATGCATATTGCTCTCTCTAA...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTATATCCTTGCAGATGTTaGAACACATCCAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLYPCRC*NTSKVT
Trigger: TGTAACCTTGGATGTGTTGCAACATCTGCAAGGATA...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTTCAAATTCCTATCCTTaGAGATGTTGCAACACATCC +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGASNSYP*RCCNTS
Trigger: GGATGTGTTGCAACATCTGCAAGGATAGGAATTTGA...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCCTCTGGTTGGAGTATaGAATCGTTTATATCACCAG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGPLVGV*NRLYHQ
Trigger: CTGGTGATATAAACGATTCCATACTCCAACCAGAGG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATATCTTCACCTCTGGTTaGAGTATGGAATCGTTTATA +
Preference number: 4 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDIFTSG*SMESFI
Trigger: TATAAACGATTCCATACTCCAACCAGAGGTGAAGAT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAATGAATCTTCACCTCTaGTTGGAGTATGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLMNLHL*LEYGIV
Trigger: AACGATTCCATACTCCAACCAGAGGTGAAGATTCAT...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTATGAATCTTCACCTCTaGTTGGAGTATGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAMNLHL*LEYGIV
Trigger: AACGATTCCATACTCCAACCAGAGGTGAAGATTCAT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTTTTCAATCCCATTGTaGTTCTCCCCATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGFSIPL*FSPFQM
Trigger: CATCTGGAATGGGGAGAACCACAATGGGATTGAAAA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCTCATAAAAACCCCATaGAGAAGACATAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWLIKTP*RRHSQH
Trigger: ATGTTGGCTATGTCTTCTCCATGGGGTTTTTATGAG...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTATGAGGTTTGGAGCTaGGGAGAAAAGTCATACGGG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDYEVWS*GEKSYG
Trigger: CCCGTATGACTTTTCTCCCCAGCTCCAAACCTCATA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATATACGTAGCATTAACTaGATCGAGTACGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDIRSIN*IEYVGG
Trigger: TCCGCCAACGTACTCGATTCAGTTAATGCTACGTAT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAGGATTCCTACAGAACTaGTTTTTAGAGAGAGCAATA +
Preference number: 4 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLGFLQN*FLERAI
Trigger: TATTGCTCTCTCTAAAAATCAGTTCTGTAGGAATCC...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GCAATCTCCTTTGTCTTAGGTAGCCAGATTAAGGAACAAATCTGTGAGTTTGTGTTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: AISFVLGSQIKEQICEFVFQKFL*WGSSVV
Trigger: AACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAA...CACAAACTCACAGATTTGTTCCTTAATCTGGCTACCTAAGACAAAGGAGATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTGTTTTAGGCATTTCTaGCCTTTTGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGCFRHF*PFEATL
Trigger: AAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCAAACACATTCGGATTaGTCACAGAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGQTHSD*SQSCIF
Trigger: AAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp GCAATCTCCTTTGTCTTAGGTAGCCAGATTAAGGAACAAATCTGTGAGTTTGTGCAAACACATTCGGATTaGTCACAGAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: AISFVLGSQIKEQICEFVQTHSD*SQSCIF
Trigger: AAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTG...CACAAACTCACAGATTTGTTCCTTAATCTGGCTACCTAAGACAAAGGAGATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR GCA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGCATGCTTAACATACTaGCTAGCATATAGTGAGATT +
Preference number: 4 (lower is better)
Translates to: QANAKNSNPGNIISKHFLACLTY*LAYSEI
Trigger: AATCTCACTATATGCTAGGCAGTATGTTAAGCATGC...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTATCTTCACCTCTGGTTaGAGTATGGAATCGTTTATA +
Preference number: 4 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAIFTSG*SMESFI
Trigger: TATAAACGATTCCATACTCCAACCAGAGGTGAAGAT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACAGAGCCCAGGGCTATaGCAACAAGATTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREQSPGL*QQDSEN
Trigger: GTTTTCAGAATCTTGTTGCCATAGCCCTGGGCTCTG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATAAAGAAGCGGATCTCTaGGAAGCAGAGCAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDKEADL*EAEQVK
Trigger: CTTTACTTGCTCTGCTTCCCAGAGATCCGCTTCTTT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAACCTAGCAGTGGTGTaGAGTCAAGAGGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLNLAVV*SQEDQF
Trigger: GAACTGATCCTCTTGACTCCACACCACTGCTAGGTT...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACGAAGACCAGTAATATaGATCTTCACCTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKRERRPVI*IFTSGW
Trigger: CCAACCAGAGGTGAAGATTCATATTACTGGTCTTCG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGATGGCAACAAGATTCTaGAAACTCCAATCTAGGATA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGMATRF*KLQSRI
Trigger: TATCCTAGATTGGAGTTTTCAGAATCTTGTTGCCAT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR GCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCGATTGCTCACAGAGCTaGATTTTTCCATTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLDCSQS*IFPLAC
Trigger: GCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATC...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATCCTCTGGTTGGAGTATaGAATCGTTTATATCACCAG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDPLVGV*NRLYHQ
Trigger: CTGGTGATATAAACGATTCCATACTCCAACCAGAGG...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGATCTTCACCTCTGGTTaGAGTATGGAATCGTTTATA +
Preference number: 4 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGIFTSG*SMESFI
Trigger: TATAAACGATTCCATACTCCAACCAGAGGTGAAGAT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTTTTCAATCCCATTGTaGTTCTCCCCATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDFSIPL*FSPFQM
Trigger: CATCTGGAATGGGGAGAACCACAATGGGATTGAAAA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp ATTTTTGAGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCTCTCACACAGAATTCTaGCTCCCAAACAATTATTTT +
Preference number: 4 (lower is better)
Translates to: IFETLPKHPMDMLTRTYSSHTEF*LPNNYF
Trigger: AAAATAATTGTTTGGGAGCCAGAATTCTGTGTGAGA...GGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR TCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACCAACTACTGACAAATaGCCAAGCATATTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREPTTDK*PSIFLS
Trigger: GCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDFQKFL*WGSSVV
Trigger: AACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCCAGAAATTCCTTTGCTaGGGGTCTTCAGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLQKFLC*GSSVVL
Trigger: AAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTG...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACCTCTGGTTGGAGTATaGAATCGTTTATATCACCAG +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREPLVGV*NRLYHQ
Trigger: CTGGTGATATAAACGATTCCATACTCCAACCAGAGG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
3UTR CAA 72 bp GAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTaGTTTGATACTCATAAAAACCCCATGGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: ENRHSHQEEYFN*FDTHKNPMEKT
Trigger: TGTCTTCTCCATGGGGTTTTTATGAGTATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATATGGCAACAAGATTCTaGAAACTCCAATCTAGGATA +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDMATRF*KLQSRI
Trigger: TATCCTAGATTGGAGTTTTCAGAATCTTGTTGCCAT...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR TCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACTATCCTaGGGCAATCAGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLKRELS*GNQKYE
Trigger: CTCATATTTCTGATTGCCTCAGGATAGTTCCCTTTT...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAATTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREFQKFL*WGSSVV
Trigger: AACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAA...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAACAAACACATTCGGATTaGTCACAGAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: CFQCVEIELKTGKYLKREQTHSD*SQSCIF
Trigger: AAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTG...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATTTAGAGAGAGCAATATaGATGCTTAACATACTGCCT +
Preference number: 4 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDLERAI*MLNILP
Trigger: AGGCAGTATGTTAAGCATGCATATTGCTCTCTCTAA...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCATGAATCTTCACCTCTaGTTGGAGTATGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLMNLHL*LEYGIV
Trigger: AACGATTCCATACTCCAACCAGAGGTGAAGATTCAT...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR GCA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCGCATGCTTAACATACTaGCTAGCATATAGTGAGATT +
Preference number: 4 (lower is better)
Translates to: NELCFQCVEIELKTGKYLACLTY*LAYSEI
Trigger: AATCTCACTATATGCTAGGCAGTATGTTAAGCATGC...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS TCA 90 bp ACCCTCCGAGGCGCGGTGCGCTCCAGTTTCCACTCCATCTCCGGCTaGCTTCGCCCTGCCTGGCGTTTGGCCTCTCTGCTCGACTGCCTC +
Preference number: 5 (lower is better)
Translates to: TLRGAVRSSFHSISG*LRPAWRLASLLDCL
Trigger: GAGGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS GCA 90 bp GTACCCACAGCATCTCCTCTTCCGTGCGGACCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCATCTCCGGCTGACTTCGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: VPTASPLPCGPSEAR*APVSTPSPADFALP
Trigger: AGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGCTGTGGGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS GCA 90 bp TTTCCCACAGCATCTCCTCTTCCGTGCGGACCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCATCTCCGGCTGACTTCGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FPTASPLPCGPSEAR*APVSTPSPADFALP
Trigger: AGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGCTGTGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS GCA 90 bp CGCGGTGCGCTCCAGTTTCCACTCCATCTCCGGCTGACTTCGCCCTaGCTGGCGTTTGGCCTCTCTGCTCGACTGCCTCTGGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RGALQFPLHLRLTSP*LAFGLSARLPLVFF
Trigger: GAAGAAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS GCA 90 bp GCTGCAGCAGAAAACACCCGGGTCTGGTCTGGACTCAAAGACAGGTaGAGCACTCTGCCCCTGTGGCCTGACCTGGACACAGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: AAAENTRVWSGLKDR*STLPLWPDLDTVGQ
Trigger: CTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS GCA 90 bp AAAACACCCGGGTCTGGTCTGGACTCAAAGACAGGTGCAGCACTCTaGCCCTGTGGCCTGACCTGGACACAGTGGGACAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: KTPGSGLDSKTGAAL*PCGLTWTQWDRSTQ
Trigger: CTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS CCA 90 bp CGGGTCTGGTCTGGACTCAAAGACAGGTGCAGCACTCTGCCCCTGTaGCCTGACCTGGACACAGTGGGACAGGTCCACACAGTCACATCA +
Preference number: 5 (lower is better)
Translates to: RVWSGLKDRCSTLPL*PDLDTVGQVHTVTS
Trigger: TGATGTGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS CCA 90 bp CATACAGAGGCCGTCCCATCAGCTGCAGCAGAAAACACCCGGGTCTaGTCTGGACTCAAAGACAGGTGCAGCACTCTGCCCCTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HTEAVPSAAAENTRV*SGLKDRCSTLPLWP
Trigger: AGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCCTCTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS CCA 90 bp CCAGTTTCCACTCCATCTCCGGCTGACTTCGCCCTGCCTGGCGTTTaGCCTCTCTGCTCGACTGCCTCTGGTTTTCTTCCCAGGTCTAAG +
Preference number: 5 (lower is better)
Translates to: PVSTPSPADFALPGV*PLCSTASGFLPRSK
Trigger: CTTAGACCTGGGAAGAAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS GCA 90 bp ACTCCATCTCCGGCTGACTTCGCCCTGCCTGGCGTTTGGCCTCTCTaGTCGACTGCCTCTGGTTTTCTTCCCAGGTCTAAGTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: TPSPADFALPGVWPL*STASGFLPRSKSVL
Trigger: CAAGACTGACTTAGACCTGGGAAGAAAACCAGAGGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS TCA 90 bp CTGGTCTGGACTCAAAGACAGGTGCAGCACTCTGCCCCTGTGGCCTaGCCTGGACACAGTGGGACAGGTCCACACAGTCACATCATTCTT +
Preference number: 5 (lower is better)
Translates to: LVWTQRQVQHSAPVA*PGHSGTGPHSHIIL
Trigger: AAGAATGATGTGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS CCA 90 bp AAGACAGGTGCAGCACTCTGCCCCTGTGGCCTGACCTGGACACAGTaGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGAC +
Preference number: 5 (lower is better)
Translates to: KTGAALCPCGLTWTQ*DRSTQSHHSWEYLD
Trigger: GTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS CCA 90 bp GAACAAATCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTaGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: EQILTAVDWVMTFSG*PCALAPGSWGHIVS
Trigger: GCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGATTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322374.10
CDS-3UTR CAA 90 bp GCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAGGCATTTCTGCCCTTTaGAGGCAACACTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: AACHPVTTSEHTQLACGEGISAL*RQHFLS
Trigger: GGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCC...TTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp GCAGCCTGCCATCCGGTGACCACTTCAGAGCACACACAGCTTGCTTGTGGCGAAATGTTTTCAATCCCATaGTGGTTCTCCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: AACHPVTTSEHTQLACGEMFSIP*WFSPFQ
Trigger: CTGGAATGGGGAGAACCACAATGGGATTGAAAACAT...TTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp CCAGGGACACCAATCCATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGGCACACACAGCTTGCTaGTGGCGAAGTGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: PGTPIHGLDCRRLGYDFQAHTAC*WRSVPT
Trigger: TGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGC...CTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp AAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACCAGAGCACACACAGCTaGCTTGTGGCGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KMCKRPSFIPPPMARTPDQSTHS*LVAKCS
Trigger: GGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTG...GTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp CATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTTGGCCCTGTGCAACAAATCTGTGAGTTaGTGCTTGGGGTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: HGLDCRRLGYDFQRLALCNKSVS*CLGSGC
Trigger: GCATCCAGACCCCAAGCACAAACTCACAGATTTGTT...GCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS TCA 90 bp GTTGACTGCTCTTCCCCAAAGGAATCAGAGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTGGTAATGGGGCTACTCGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: VDCSSPKESEDRALV*LCCHLVVMGLLATG
Trigger: TCCTGTTGCGAGTAGCCCCATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCCTCTGATTCCTTTGGGGAAGAGCAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS-3UTR CAA 90 bp CCACTGCATGGCTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAAGGACAGAGCCCTAGTTaGACTTTGCTGCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: PLHGYRASLITLTTPPSKGQSPS*TLLPPC
Trigger: ACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCC...TTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp AAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGACCCCAGACGGACAGAGCCCTAGTTaGACTTTGCTGCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: KMCKRPSFIPPPMARTPDGQSPS*TLLPPC
Trigger: ACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCC...GTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp GCCAGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCTATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: ARLRNKSVSLCLGSGCSSYDFQR*ALCTGT
Trigger: GGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATA...GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACAGACAGGAGAATCGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: WPKTILLPMWPREAKRLDRQENR*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGTCT...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS GCA 90 bp TTGCTGCCACCTTGTGGTAATGGGGCTACTCGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAAGTTGCTCTTAAAGTCAGAATACGT +
Preference number: 5 (lower is better)
Translates to: LLPPCGNGATRNRNL*GQPLRKVALKVRIR
Trigger: ACGTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAGTAGCCCCATTACCACAAGGTGGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS-3UTR CAA 90 bp TGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGCAATCTGTGAGTTTGTGCTaGGGGTCTGGATGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WDRSTQSHHSWEYLDQLQSVSLC*GSGCSS
Trigger: GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGA...TTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGCAGGGTCAAAAGACTTaGGGAGGCCAAGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWQGQKT*GGQAQW
Trigger: CCACTGTGCTTGGCCTCCCAAAGTCTTTTGACCCTG...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CCAGGGACACCAATCCATGGCCTTGACTGCCGTAGACTGGGTTATGACTTTCAGTACGTTGGCGGAATCTaGACTTCTCTTCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: PGTPIHGLDCRRLGYDFQYVGGI*TSLLLQ
Trigger: TTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTA...CTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp CACAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: HSGTGPHSHIILGSTLTSSPSLT*LPPCGN
Trigger: ATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCT...ACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGYDFQR*ALCTGT
Trigger: GGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAAAACACGCCCCAGTCTaGACCCACCAGGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: HLYPRCVSVHPSFLLQWQKHAPV*THQAWW
Trigger: CCACCATGCCTGGTGGGTCAAGACTGGGGCGTGTTT...TTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGAGGTCTAAGTCAGTCTaGACGCCTAATCGTCAAACC +
Preference number: 5 (lower is better)
Translates to: RPCQSTPWICLPELIPEGRSKSV*TPNRQT
Trigger: GGTTTGACGATTAGGCGTCAAGACTGACTTAGACCT...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CAGTGGGACAGGTCCACACAGTCACATCATTCTTGGGAGTACCTTGACCAGTTGGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: QWDRSTQSHHSWEYLDQLVSEIP*LGVFSC
Trigger: ACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAAC...CAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSSSLCP*HEVPCK
Trigger: TTTGCAAGGCACCTCATGCAATGGACAGAGACTGGA...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AAATTGCCACAGGCAATTATCTCCCCACTGCATGGCTACAGAGCTTCCCTGATATCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: KLPQAIISPLHGYRASLISSLCP*HEVPCK
Trigger: TTTGCAAGGCACCTCATGCAATGGACAGAGACTGGA...TATCAGGGAAGCTCTGTAGCCATGCAGTGGGGAGATAATTGCCTGTGGCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTGGCATTTCTGCCCTTTaGAGGCAACACTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: QGTERISTGLLDVQPSSGGISAL*RQHFLS
Trigger: GGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCC...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACAGAGCACACACAGCTaGCTTGTGGCGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: PILADVATHPRLQGVFMAQSTHS*LVAKCS
Trigger: GGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCAGAGCACACACAGCTaGCTTGTGGCGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGQSTHS*LVAKCS
Trigger: GGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGATCGTGGGGCCATATaGTCAGCAGTCCATCACTGC +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGDRGAI*SAVHHC
Trigger: GCAGTGATGGACTGCTGACAATATGGCCCCACGATC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAGATCGTGGGGCCATATaGTCAGCAGTCCATCACTGC +
Preference number: 5 (lower is better)
Translates to: AFISKMCKRPSFIPPPMADRGAI*SAVHHC
Trigger: GCAGTGATGGACTGCTGACAATATGGCCCCACGATC...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACACCAATCCATGGCCTaGACTGCCGTAGACTGGGTT +
Preference number: 5 (lower is better)
Translates to: PILADVATHPRLQGVFMAHQSMA*TAVDWV
Trigger: AACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGCACCAATCCATGGCCTaGACTGCCGTAGACTGGGTT +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGHQSMA*TAVDWV
Trigger: AACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTG...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCAGGTCTAAGTCAGTCTaGACGCCTAATCGTCAAACC +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSRSKSV*TPNRQT
Trigger: GGTTTGACGATTAGGCGTCAAGACTGACTTAGACCT...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWSPSLT*LPPCGN
Trigger: ATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCT...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp AGATTAAGGAACAAATCTGTGAGTTTGTGCTTGGGGTCTGGATGCTCTTCCCAGTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: RLRNKSVSLCLGSGCSSQSSLCP*HEVPCK
Trigger: TTTGCAAGGCACCTCATGCAATGGACAGAGACTGGA...CTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp AGACCTTGCCAAAGCACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGCCAAACACATTCGGATaGCTCACAGAGCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: RPCQSTPWICLPELIPEGPNTFG*LTELHF
Trigger: AAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGG...CCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGTGCTTTGGCAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGCACACACAGCTTGCTaGTGGCGAAGTGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: PILADVATHPRLQGVFMAAHTAC*WRSVPT
Trigger: TGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGC...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGATATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRYDFQR*ALCTGT
Trigger: GGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATA...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATTCTGTGAGTTTGTGCTaGGGGTCTGGATGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDSVSLC*GSGCSS
Trigger: GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGA...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCAACAAATCTGTGAGTTaGTGCTTGGGGTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSNKSVS*CLGSGC
Trigger: GCATCCAGACCCCAAGCACAAACTCACAGATTTGTT...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAGGGGACTGAGAGGATCAGCACAGGACTTTTAGATGTTCAACCTAGCAGTGGTCTATCCTTGCAGATGTaGCAACACATCCAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: QGTERISTGLLDVQPSSGLSLQM*QHIQGY
Trigger: GTAACCTTGGATGTGTTGCAACATCTGCAAGGATAG...ACCACTGCTAGGTTGAACATCTAAAAGTCCTGTGCTGATCCTCTCAGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CCACTGCATGGCTACAGAGCTTCCCTGATAACGCTCACAACACCACCATCCAAACTGATGAGCAATTACTaGGCTTATGTGGGATCTGTT +
Preference number: 5 (lower is better)
Translates to: PLHGYRASLITLTTPPSKLMSNY*AYVGSV
Trigger: AACAGATCCCACATAAGCCAAGTAATTGCTCATCAG...TTTGGATGGTGGTGTTGTGAGCGTTATCAGGGAAGCTCTGTAGCCATGCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS TCA 90 bp CCCACTGCTGAGGATAAAGTGATTCCAGCTCAGAGCCCCAACTACTaGCAAATGACCAAGCATATTTCTCAGCCGCTTTTTAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: PTAEDKVIPAQSPNY*QMTKHISQPLFSYH
Trigger: GTGGTAACTAAAAAGCGGCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS TCA 90 bp CAGCCTGCTGAGGATAAAGTGATTCCAGCTCAGAGCCCCAACTACTaGCAAATGACCAAGCATATTTCTCAGCCGCTTTTTAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: QPAEDKVIPAQSPNY*QMTKHISQPLFSYH
Trigger: GTGGTAACTAAAAAGCGGCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCTACGTTGGCGGAATCTaGACTTCTCTTCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSYVGGI*TSLLLQ
Trigger: TTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTA...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGACAGAGCCCTAGTTaGACTTTGCTGCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAGQSPS*TLLPPC
Trigger: ACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSVSEIP*LGVFSC
Trigger: ACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAAC...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGSSLCP*HEVPCK
Trigger: TTTGCAAGGCACCTCATGCAATGGACAGAGACTGGA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp ACCCCATGGATATGCTTACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGGCATTTCTGCCCTTTaGAGGCAACACTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TPWICLPELIPEGKCSRQGISAL*RQHFLS
Trigger: GGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCC...TTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTAAGCATATCCATGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp AAGAGGGGCAGAAAGAAGAAAGCAGAGAAGAAAAGAAGCGGATCTCTGGGAAGCCCAAACACATTCGGATaGCTCACAGAGCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: KRGRKKKAEKKRSGSLGSPNTFG*LTELHF
Trigger: AAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGG...GCTTCCCAGAGATCCGCTTCTTTTCTTCTCTGCTTTCTTCTTTCTGCCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGCACACACAGCTTGCTaGTGGCGAAGTGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWAHTAC*WRSVPT
Trigger: TGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGCACACACAGCTTGCTaGTGGCGAAGTGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAAHTAC*WRSVPT
Trigger: TGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp TGGCCCAAAACAATCCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGGACTTTATTTTTGAGACCTaGCCAAAGCACCCCATGGAT +
Preference number: 5 (lower is better)
Translates to: WPKTILLPMWPREAKRLDFIFET*PKHPMD
Trigger: ATCCATGGGGTGCTTTGGCAAGGTCTCAAAAATAAA...GTCCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAAGGATTGTTTTGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CTCCAGAGGTTGAGGTCAAAGGTGTTTGGTAATAGGTTGTCCTTGAGAGTTGATAGGTCTAAGTCAGTCTaGACGCCTAATCGTCAAACC +
Preference number: 5 (lower is better)
Translates to: LQRLRSKVFGNRLSLRVDRSKSV*TPNRQT
Trigger: GGTTTGACGATTAGGCGTCAAGACTGACTTAGACCT...ATCAACTCTCAAGGACAACCTATTACCAAACACCTTTGACCTCAACCTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp ATGGAACAGGACCTTCTAGAAATTGCCACAGGCAATTATCTCCCCACTGCATGGAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: MEQDLLEIATGNYLPTAWSLFAK*LLKSEY
Trigger: GTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCT...CCATGCAGTGGGGAGATAATTGCCTGTGGCAATTTCTAGAAGGTCCTGTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGGCATTTCTGCCCTTTaGAGGCAACACTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGGISAL*RQHFLS
Trigger: GGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGAACAAATCTGTGAGTTaGTGCTTGGGGTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGNKSVS*CLGSGC
Trigger: GCATCCAGACCCCAAGCACAAACTCACAGATTTGTT...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS TCA 90 bp TGCCCTTTTGAGGCAACACTTTCTTTCCAGTCTCTGTCCATTGCATaGGGTGCCTTGCAAAAATGGAGAGCAGAGTTACTTGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: CPFEATLSFQSLSIA*GALQKWRAELLVSE
Trigger: TTCTGAAACAAGTAACTCTGCTCTCCATTTTTGCAAGGCACCTCATGCAATGGACAGAGACTGGAAAGAAAGTGTTGCCTCAAAAGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTAGGTCTAAGTCAGTCTaGACGCCTAATCGTCAAACC +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGARSKSV*TPNRQT
Trigger: GGTTTGACGATTAGGCGTCAAGACTGACTTAGACCT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTACGTTGGCGGAATCTaGACTTCTCTTCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGYVGGI*TSLLLQ
Trigger: TTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLSPSLT*LPPCGN
Trigger: ATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCT...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGASPSLT*LPPCGN
Trigger: ATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: QANAKNSNPGNIISKHFLSPSLT*LPPCGN
Trigger: ATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGVSEIP*LGVFSC
Trigger: ACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAAC...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CACGCTAGTTCTCTCAAGAGGATTCTCACACAGAATTCTGGCTCCCAAACAATTGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: HASSLKRILTQNSGSQTIVSEIP*LGVFSC
Trigger: ACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAAC...AATTGTTTGGGAGCCAGAATTCTGTGTGAGAATCCTCTTGAGAGAACTAGCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGSSLCP*HEVPCK
Trigger: TTTGCAAGGCACCTCATGCAATGGACAGAGACTGGA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGCATTTCTGCCCTTTaGAGGCAACACTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAGISAL*RQHFLS
Trigger: GGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCC...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CCTATCCTTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCACCAAACACATTCGGATaGCTCACAGAGCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: PILADVATHPRLQGVFMAPNTFG*LTELHF
Trigger: AAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGG...TGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAAGGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCACCAAACACATTCGGATaGCTCACAGAGCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: AFISKMCKRPSFIPPPMAPNTFG*LTELHF
Trigger: AAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGG...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAATCTCTGACTCCATCTTaGCAGCCTTTCCAAACACAT +
Preference number: 5 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQSLTPS*QPFQTH
Trigger: ATGTGTTTGGAAAGGCTGCAAAGATGGAGTCAGAGA...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGTCTCTGACTCCATCTTaGCAGCCTTTCCAAACACAT +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGSLTPS*QPFQTH
Trigger: ATGTGTTTGGAAAGGCTGCAAAGATGGAGTCAGAGA...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp GCATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCATCTCTGACTCCATCTTaGCAGCCTTTCCAAACACAT +
Preference number: 5 (lower is better)
Translates to: AFISKMCKRPSFIPPPMASLTPS*QPFQTH
Trigger: ATGTGTTTGGAAAGGCTGCAAAGATGGAGTCAGAGA...TGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATCAGAGCACACACAGCTaGCTTGTGGCGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDQSTHS*LVAKCS
Trigger: GGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTG...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAATATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: CFQCVEIELKTGKYLKREYDFQR*ALCTGT
Trigger: GGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATA...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGAGAGGTAATAGGTTGTCCTaGAGAGTTGATGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LMPRTQTQVTSFQNTSWRGNRLS*RVDEQG
Trigger: CCCCTGCTCATCAACTCTCAAGGACAACCTATTACC...TCTCCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTATACGTTGGCGGAATCTaGACTTCTCTTCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLYVGGI*TSLLLQ
Trigger: TTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTA...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp TTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAGGAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: FISKMCKRPSFIPPPMARSLFAK*LLKSEY
Trigger: GTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCT...CCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp GAAGAACAGGAGAACAGGCATTCACATCAAGAAGAGTATTTCAACTTGTTTGATGGACAGAGCCCTAGTTaGACTTTGCTGCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: EEQENRHSHQEEYFNLFDGQSPS*TLLPPC
Trigger: ACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCC...ATCAAACAAGTTGAAATACTCTTCTTGATGTGAATGCCTGTTCTCCTGTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: QANAKNSNPGNIISKHFLVSEIP*LGVFSC
Trigger: ACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAAC...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGATGTTTTCAATCCCATaGTGGTTCTCCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWMFSIP*WFSPFQ
Trigger: CTGGAATGGGGAGAACCACAATGGGATTGAAAACAT...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp GATGTTCAACCTAGCAGTGGTGTGGAGTCAAGAGGATCAGTTCTAAGACAATTAATTCTTGGGAGTACCTaGACCAGTTGCAATCTCCTT +
Preference number: 5 (lower is better)
Translates to: DVQPSSGVESRGSVLRQLILGST*TSCNLL
Trigger: AAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAAT...TAATTGTCTTAGAACTGATCCTCTTGACTCCACACCACTGCTAGGTTGAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTATTCTTGGGAGTACCTaGACCAGTTGCAATCTCCTT +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGAILGST*TSCNLL
Trigger: AAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAAT...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CATTTATATCCAAGATGTGTAAGCGTCCATCCTTCATTCCTCCTCCAATGGCAAATTCTTGGGAGTACCTaGACCAGTTGCAATCTCCTT +
Preference number: 5 (lower is better)
Translates to: HLYPRCVSVHPSFLLQWQILGST*TSCNLL
Trigger: AAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAAT...TTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513180.5
CDS-3UTR CAA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAGTGTTTGGTAATAGGTaGTCCTTGAGAGTTGATGAG +
Preference number: 5 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQVFGNR*SLRVDE
Trigger: CTCATCAACTCTCAAGGACAACCTATTACCAAACAC...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTCTATCCTTGCAGATGTaGCAACACATCCAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: SQHHHLHSEIRKLKPRGALSLQM*QHIQGY
Trigger: GTAACCTTGGATGTGTTGCAACATCTGCAAGGATAG...AGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGGCTGGGATTAAGGAACAAATCTaGACTGCCGTAGACTGGGTT +
Preference number: 5 (lower is better)
Translates to: QHHHLHSEIRKLKPRGAGIKEQI*TAVDWV
Trigger: AACCCAGTCTACGGCAGTCAAGATTTGTTCCTTAAT...CCCAGCCCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322374.10
CDS-3UTR CAA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTAATCAACAACAGAGCCTaGCATAGAGTATTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLINNRA*HRVFRG
Trigger: CCCTCTGAATACTCTATGCAAGGCTCTGTTGTTGAT...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp CAGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: QANAKNSNPGNIISKHFLSLFAK*LLKSEY
Trigger: GTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCT...CAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCGGACAGAGCCCTAGTTaGACTTTGCTGCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: NELCFQCVEIELKTGKYLGQSPS*TLLPPC
Trigger: ACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCC...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGCCAAACACATTCGGATaGCTCACAGAGCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGPNTFG*LTELHF
Trigger: AAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGG...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGTCTCTGACTCCATCTTaGCAGCCTTTCCAAACACAT +
Preference number: 5 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGSLTPS*QPFQTH
Trigger: ATGTGTTTGGAAAGGCTGCAAAGATGGAGTCAGAGA...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGATGTTTTCAATCCCATaGTGGTTCTCCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGMFSIP*WFSPFQ
Trigger: CTGGAATGGGGAGAACCACAATGGGATTGAAAACAT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAATCTGTGAGTTTGTGCTaGGGGTCTGGATGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CFQCVEIELKTGKYLKRESVSLC*GSGCSS
Trigger: GGAAGAGCATCCAGACCCCAAGCACAAACTCACAGA...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AGGCTAATGCCAAGAACTCAAACCCAGGTAACATCATTTCAAAACACTTCCTGGGTGTTTGGTAATAGGTaGTCCTTGAGAGTTGATGAG +
Preference number: 5 (lower is better)
Translates to: RLMPRTQTQVTSFQNTSWVFGNR*SLRVDE
Trigger: CTCATCAACTCTCAAGGACAACCTATTACCAAACAC...CCAGGAAGTGTTTTGAAATGATGTTACCTGGGTTTGAGTTCTTGGCATTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp TTGCAGATGTTGCAACACATCCAAGGTTACAGGGTGTATTTATGGCAGAGCCAAATCAAATTCCTATCCTaGCAGATGTTGCAACACATC +
Preference number: 5 (lower is better)
Translates to: LQMLQHIQGYRVYLWQSQIKFLS*QMLQHI
Trigger: GATGTGTTGCAACATCTGCAAGGATAGGAATTTGAT...TTGGCTCTGCCATAAATACACCCTGTAACCTTGGATGTGTTGCAACATCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp CATAGCCAACATCATCATCTTCACTCAGAAATAAGGAAACTGAAACCTAGAGGGAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: HSQHHHLHSEIRKLKPRGSLFAK*LLKSEY
Trigger: GTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCT...CCCTCTAGGTTTCAGTTTCCTTATTTCTGAGTGAAGATGATGATGTTGGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS-3UTR CAA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCGGTAATAGGTTGTCCTaGAGAGTTGATGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: NELCFQCVEIELKTGKYLGNRLS*RVDEQG
Trigger: CCCCTGCTCATCAACTCTCAAGGACAACCTATTACC...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp TACCAGAACTTATTCCAGAGGGGAAATGTAGCAGGCAAGTTTCCTTGGCATTTATGTTCACATTTATTTTaGAGACCTTGCCAAAGCACC +
Preference number: 5 (lower is better)
Translates to: YQNLFQRGNVAGKFPWHLCSHLF*RPCQST
Trigger: GGTGCTTTGGCAAGGTCTCAAAAATAAATGTGAACA...TAAATGCCAAGGAAACTTGCCTGCTACATTTCCCCTCTGGAATAAGTTCTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS-3UTR CAA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAATTCTGCTTCAAGTCTTaGGAGAGCACACGCATGATA +
Preference number: 5 (lower is better)
Translates to: CFQCVEIELKTGKYLKREFCFKS*ESTRMI
Trigger: TATCATGCGTGTGCTCTCCAAAGACTTGAAGCAGAA...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS-3UTR CAA 90 bp AATGAGTTGTGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCATTCTTGGGAGTACCTaGACCAGTTGCAATCTCCTT +
Preference number: 5 (lower is better)
Translates to: NELCFQCVEIELKTGKYLILGST*TSCNLL
Trigger: AAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAAT...GAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACACAACTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS CCA 90 bp CAGATAGTAGTCATTTCGAAGACCAGTAATATGAATCTTCACCTCTaGTTGGAGTATGGAATCGTTTATATCACCAGAACTTTTAAGATG +
Preference number: 5 (lower is better)
Translates to: QIVVISKTSNMNLHL*LEYGIVYITRTFKM
Trigger: CATCTTAAAAGTTCTGGTGATATAAACGATTCCATACTCCAACCAGAGGTGAAGATTCATATTACTGGTCTTCGAAATGACTACTATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS-3UTR CAA 90 bp TGTTTTCAATGTGTTGAGATTGAGCTAAAGACAGGAAAGTATCTCAAAAGGGAAATCAAATTCCTATCCTaGCAGATGTTGCAACACATC +
Preference number: 5 (lower is better)
Translates to: CFQCVEIELKTGKYLKREIKFLS*QMLQHI
Trigger: GATGTGTTGCAACATCTGCAAGGATAGGAATTTGAT...TTCCCTTTTGAGATACTTTCCTGTCTTTAGCTCAATCTCAACACATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296733.5
ENST00000381375.7
CDS TCA 72 bp GGCGCGGTGCGCTCCAGTTTCCACTCCATCTCCGGCTaGCTTCGCCCTGCCTGGCGTTTGGCCTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GAVRSSFHSISG*LRPAWRLASLL
Trigger: GAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS GCA 72 bp GCATCTCCTCTTCCGTGCGGACCCTCCGAGGCGCGGTaGGCTCCAGTTTCCACTCCATCTCCGGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: ASPLPCGPSEAR*APVSTPSPADF
Trigger: GAAGTCAGCCGGAGATGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS GCA 72 bp CTCCAGTTTCCACTCCATCTCCGGCTGACTTCGCCCTaGCTGGCGTTTGGCCTCTCTGCTCGACTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LQFPLHLRLTSP*LAFGLSARLPL
Trigger: CAGAGGCAGTCGAGCAGAGAGGCCAAACGCCAGGCAGGGCGAAGTCAGCCGGAGATGGAGTGGAAACTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS CCA 72 bp GCCGTCCCATCAGCTGCAGCAGAAAACACCCGGGTCTaGTCTGGACTCAAAGACAGGTGCAGCACTCTGCCC +
Preference number: 6 (lower is better)
Translates to: AVPSAAAENTRV*SGLKDRCSTLP
Trigger: GGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS CCA 72 bp CCCATCAGCTGCAGCAGAAAACACCCGGGTCTGGTCTaGACTCAAAGACAGGTGCAGCACTCTGCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: PISCSRKHPGLV*TQRQVQHSAPV
Trigger: CACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGCTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS CCA 72 bp AAGACAGGTGCAGCACTCTGCCCCTGTGGCCTGACCTaGACACAGTGGGACAGGTCCACACAGTCACATCAT +
Preference number: 6 (lower is better)
Translates to: KTGAALCPCGLT*TQWDRSTQSHH
Trigger: ATGATGTGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296733.5
CDS TCA 72 bp CTGCCTCTGGTTTTCTTCCCAGGTCTAAGTCAGTCTTaGCGCCTAATCGTCAAACCCCTGGAGTCCCGTCCC +
Preference number: 6 (lower is better)
Translates to: LPLVFFPGLSQS*RLIVKPLESRP
Trigger: GGGACGGGACTCCAGGGGTTTGACGATTAGGCGTCAAGACTGACTTAGACCTGGGAAGAAAACCAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
CDS CAA 90 bp GGAACAAATCTTGACTGCCGTAGACTGGGTTATGACTTTCAGCGGTaGGCCCTGTGCACTGGCACCTGGATCGTGGGGCCATATTGTCAG +
Preference number: 6 (lower is better)
Translates to: GTNLDCRRLGYDFQR*ALCTGTWIVGPYCQ
Trigger: CTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGATTTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322374.10
CDS GCA 72 bp CTAGTAGCAATTCCATACAGAGGCCGTCCCATCAGCTaGAGCAGAAAACACCCGGGTCTGGTCTGGACTCAA +
Preference number: 6 (lower is better)
Translates to: LVAIPYRGRPIS*SRKHPGLVWTQ
Trigger: TTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCCTCTGTATGGAATTGCTACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
CDS CAA 90 bp CTGCTCTTCCCCAAAGGAATCAGAGGACAGAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAATGGGGCTACTCGCAACAGGAACCTC +
Preference number: 6 (lower is better)
Translates to: LLFPKGIRGQSPSLT*LPPCGNGATRNRNL
Trigger: GAGGTTCCTGTTGCGAGTAGCCCCATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCCTCTGATTCCTTTGGGGAAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS GCA 72 bp CCTTGTGGTAATGGGGCTACTCGCAACAGGAACCTCTaGGGACAGCCTCTTCGCAAAGTTGCTCTTAAAGTC +
Preference number: 6 (lower is better)
Translates to: PCGNGATRNRNL*GQPLRKVALKV
Trigger: GACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAGTAGCCCCATTACCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS CAA 72 bp CCCAAAGGAATCAGAGGACAGAGCCCTAGTTTGACTTaGCTGCCACCTTGTGGTAATGGGGCTACTCGCAAC +
Preference number: 6 (lower is better)
Translates to: PKGIRGQSPSLT*LPPCGNGATRN
Trigger: GTTGCGAGTAGCCCCATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCCTCTGATTCCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS TCA 72 bp TCTTCCCCAAAGGAATCAGAGGACAGAGCCCTAGTTTaGCTTTGCTGCCACCTTGTGGTAATGGGGCTACTC +
Preference number: 6 (lower is better)
Translates to: SSPKESEDRALV*LCCHLVVMGLL
Trigger: GAGTAGCCCCATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCCTCTGATTCCTTTGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS GCA 72 bp TTACCACATCCCATAATTGCACTTCTCCCTCGCTGGTaGCAACTGCCAGGCAAGTTCCCTCTTTTATCCAGG +
Preference number: 6 (lower is better)
Translates to: LPHPIIALLPRW*QLPGKFPLLSR
Trigger: CCTGGATAAAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGCAATTATGGGATGTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS CCA 72 bp AGCCAGATTAAGGAACAAATCTTGACTGCCGTAGACTaGGTTATGACTTTCAGCGGTTGGCCCTGTGCACTG +
Preference number: 6 (lower is better)
Translates to: SQIKEQILTAVD*VMTFSGWPCAL
Trigger: CAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGATTTGTTCCTTAATCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322374.10
CDS CAA 90 bp GGGCTACTCGCAACAGGAACCTCTGCGGACAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATACGTAGCATTAACTGAATCGAGTACG +
Preference number: 6 (lower is better)
Translates to: GLLATGTSADSLFAK*LLKSEYVALTESST
Trigger: CGTACTCGATTCAGTTAATGCTACGTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAGTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS CAA 90 bp GGGCTACTCGCAACAGGAACCTCTGCGGACAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATACGTAGCATTAACTGAATCGAGTACC +
Preference number: 6 (lower is better)
Translates to: GLLATGTSADSLFAK*LLKSEYVALTESST
Trigger: GGTACTCGATTCAGTTAATGCTACGTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAGTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS CAA 72 bp GCAACAGGAACCTCTGCGGACAGCCTCTTCGCAAAGTaGCTCTTAAAGTCAGAATACGTAGCATTAACTGAA +
Preference number: 6 (lower is better)
Translates to: ATGTSADSLFAK*LLKSEYVALTE
Trigger: TTCAGTTAATGCTACGTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS CAA 72 bp CTTTTGAGGCAACACTTTCTTTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAAAATGGAGAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: LLRQHFLSSLCP*HEVPCKNGEQS
Trigger: ACTCTGCTCTCCATTTTTGCAAGGCACCTCATGCAATGGACAGAGACTGGAAAGAAAGTGTTGCCTCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS CAA 90 bp TGTCCATTGCATGAGGTGCCTTGCAAAAATGGAGAGCAGAGTTACTaGTTTCAGAAATTCCTTTGCTGGGGGTCTTCAGTTGTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: CPLHEVPCKNGEQSY*FQKFLCWGSSVVLC
Trigger: GCAAAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAACAAGTAACTCTGCTCTCCATTTTTGCAAGGCACCTCATGCAATGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS TCA 72 bp GTAGCATTAACTGAATCGAGTACGTTGGCGGAATCTTaGCTTCTCTTCTGCTTCAAGTCTTTGGAGAGCACA +
Preference number: 6 (lower is better)
Translates to: VALTESSTLAES*LLFCFKSLEST
Trigger: TGTGCTCTCCAAAGACTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTACTCGATTCAGTTAATGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS TCA 72 bp GAGGATAAAGTGATTCCAGCTCAGAGCCCCAACTACTaGCAAATGACCAAGCATATTTCTCAGCCGCTTTTT +
Preference number: 6 (lower is better)
Translates to: EDKVIPAQSPNY*QMTKHISQPLF
Trigger: AAAAAGCGGCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTGAGCTGGAATCACTTTATCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS GCA 72 bp AATGGAGAGCAGAGTTACTTGTTTCAGAAATTCCTTTaGTGGGGGTCTTCAGTTGTTCTTTGCGGGATCCTA +
Preference number: 6 (lower is better)
Translates to: NGEQSYLFQKFL*WGSSVVLCGIL
Trigger: TAGGATCCCGCAAAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAACAAGTAACTCTGCTCTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS CCA 72 bp CAAGTGAGACTTAAGTCTATGTTTTCAATCCCATTGTaGTTCTCCCCATTCCAGATGTATACAGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: QVRLKSMFSIPL*FSPFQMYTAEP
Trigger: GGGCTCTGCTGTATACATCTGGAATGGGGAGAACCACAATGGGATTGAAAACATAGACTTAAGTCTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS CAA 72 bp AAATGGAGAGCAGAGTTACTTGTTTCAGAAATTCCTTaGCTGGGGGTCTTCAGTTGTTCTTTGCGGGATCCT +
Preference number: 6 (lower is better)
Translates to: KWRAELLVSEIP*LGVFSCSLRDP
Trigger: AGGATCCCGCAAAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAACAAGTAACTCTGCTCTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS CAA 90 bp ATTTCTGCCCTTTTGAGGCAACACTTTCTTTCCAGTCTCTGTCCATaGCATGAGGTGCCTTGCAAAAATGGAGAGCAGAGTTACTTGTTT +
Preference number: 6 (lower is better)
Translates to: ISALLRQHFLSSLCP*HEVPCKNGEQSYLF
Trigger: AAACAAGTAACTCTGCTCTCCATTTTTGCAAGGCACCTCATGCAATGGACAGAGACTGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000507931.1
ENST00000513180.5
CDS GCA 72 bp TGCATAGAGTATTCAGAGGGCCTCTCAATTAGTCTTTaGCACCAACATCCTCCTGTTCAAATCGTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: CIEYSEGLSISL*HQHPPVQIVSS
Trigger: TGAAGAAACGATTTGAACAGGAGGATGTTGGTGGCAAAGACTAATTGAGAGGCCCTCTGAATACTCTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507931.1
CDS CAA 72 bp TTACAAGTGAGACTTAAGTCTATGTTTTCAATCCCATaGTGGTTCTCCCCATTCCAGATGTATACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LQVRLKSMFSIP*WFSPFQMYTAE
Trigger: CTCTGCTGTATACATCTGGAATGGGGAGAACCACAATGGGATTGAAAACATAGACTTAAGTCTCACTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5
CDS CAA 90 bp ATAGTAGTCATTTCGAAGACCAGTAATATGAATCTTCACCTCTGGTaGGAGTATGGAATCGTTTATATCACCAGAACTTTTAAGATGGAA +
Preference number: 6 (lower is better)
Translates to: IVVISKTSNMNLHLW*EYGIVYITRTFKME
Trigger: TTCCATCTTAAAAGTTCTGGTGATATAAACGATTCCATACTCCAACCAGAGGTGAAGATTCATATTACTGGTCTTCGAAATGACTACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296733.5
ENST00000322374.10
ENST00000381375.7
ENST00000513180.5