Pregenerated sensors for CDC123 (Homo sapiens)
Ensembl gene IDs: ENSG00000151465Ensembl transcript IDs: ENST00000281141.9, ENST00000378900.6, ENST00000429258.6, ENST00000440613.1, ENST00000442050.5, ENST00000455773.7, ENST00000497963.1, ENST00000498747.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACAGCTCCCGGAGCGGTaGGGCGGGGCCTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPQLPER*GGASSS Trigger: AGAAGAGGAGGCCCCGCCCCACCGCTCCGGGAGCTG...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| 3UTR CCA 72 bp | CAGGAAGTTGCGGCTGATGAGCAGCTCCCGGAGCGGTaGGGCGGGGCCTCCTCTTCTCCAGTTCCAGTACGC | + |
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Preference number: 3 (lower is better) Translates to: QEVAADEQLPER*GGASSSPVPVR Trigger: GCGTACTGGAACTGGAGAAGAGGAGGCCCCGCCCCACCGCTCCGGGAGCTGCTCATCAGCCGCAACTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCAAGGGTCGGCAGGAAGTaGCGGCTGATGAGCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPRVGRK*RLMSSS Trigger: GGAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCT...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| 3UTR CAA 72 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTaGCGGCTGATGAGCAGCTCCCGGAGCGGTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRK*RLMSSSRSGGA Trigger: CGCCCCACCGCTCCGGGAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCAGCTCCCGGAGCGGTaGGGCGGGGCCTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSQLPER*GGASSS Trigger: AGAAGAGGAGGCCCCGCCCCACCGCTCCGGGAGCTG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCCAGCTCCCGGAGCGGTaGGGCGGGGCCTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSQLPER*GGASSS Trigger: AGAAGAGGAGGCCCCGCCCCACCGCTCCGGGAGCTG...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR GCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTGCCGCCGCTGCTaGCTTTCCCTCTCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSSCRRC*LSLSCL Trigger: CAGGCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCT...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR GCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCCAGCTGCCGCCGCTaGTGCCTTTCCCTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSSSCRR*CLSLSC Trigger: GCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCTGGA...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCTGTGCAACGGAAAGCTaGGGAATCCTGCTCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLCATES*GILLLS Trigger: GCTCAAGAGCAGGATTCCCCAGCTTTCCGTTGCACA...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCAAGTCTATTAGCTTGTaGGCGTCCTCCCCAGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSKSISL*ASSPVE Trigger: CTCTACTGGGGAGGACGCTCACAAGCTAATAGACTT...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCAGTCGTCCTCCTGCTaGTTTCTCTTCAGCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSQSSSC*FLFSLR Trigger: CCTTAAGCTGAAGAGAAATCAGCAGGAGGACGACTG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCAACTCAAATAGGGGCTaGGCTGGACTGTCACTTCAC | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLNSNRG*AGLSLH Trigger: GTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTT...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCTCATCACTGTCTGGCTaGGAATGTGTTGGTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLSSLSG*ECVGGS Trigger: TGATCCACCAACACATTCTCAGCCAGACAGTGATGA...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCCCAGGTGAACAGCAGTaGATCTGTGACTTCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLPGEQQ*ICDFTK Trigger: TTTGGTGAAGTCACAGATTCACTGCTGTTCACCTGG...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR TCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCGGGGAATCCTGCTCTTaGGCGTCAACTTCACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSGESCS*ASTSLK Trigger: TTTTAGTGAAGTTGACGCTCAAGAGCAGGATTCCCC...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCAAACTCAGGAAATTCTaGTGCCGTAAGCGTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSKLRKF*CRKRGC Trigger: ACAGCCACGCTTACGGCACCAGAATTTCCTGAGTTT...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCCAATACGCATCCCTTaGGGCACTCCAATTAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSPIRIP*GTPIKL Trigger: AAGCTTAATTGGAGTGCCCCAAGGGATGCGTATTGG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCGCAGAAAGATGTCGCTaGGGGTTTTACATTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSAERCR*GFYISE Trigger: CTCTGAAATGTAAAACCCTCAGCGACATCTTTCTGC...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCGGTCTACAAAGTCCTTaGGTAGCCGGTAACTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLGLQSP*VAGNSN Trigger: ATTTGAGTTACCGGCTACCCAAGGACTTTGTAGACC...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTTTCTCTTCTGCTCTTaGGCGTCAACTTCACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSFLFCS*ASTSLK Trigger: TTTTAGTGAAGTTGACGCTCAAGAGCAGAAGAGAAA...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440613.1 |
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| CDS-3UTR GCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCAGAGAACTATTCATTaGTATCCAATACGCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSQRTIH*YPIRIP Trigger: AGGGATGCGTATTGGATAGCAATGAATAGTTCTCTG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCGAATTGATAGCTTCCTaGACTTTAGTGGCAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSELIAS*TLVANS Trigger: TGAGTTTGCCACTAAAGTCCAGGAAGCTATCAATTC...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCCATGAATATAAAAAGTaGCTGATGTCCACACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TARPTRIRVGRKLRLMSSHEYKK*LMSTLL Trigger: GAGCAGTGTGGACATCAGCCACTTTTTATATTCATG...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR GCA 90 bp | GTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACCCTCTTCATCCTCCAGCTaGCGCCGCTGCTGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VNVHEYKKWLMSTLLGPPSSSSS*RRCCLS Trigger: GGAAAGGCAGCAGCGGCGGCAGCTGGAGGATGAAGA...GGGTGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCTTCTATACATGGATCTaGAGAATCATCAGTACAATG | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLFYTWI*RIISTM Trigger: CATTGTACTGATGATTCTCCAGATCCATGTATAGAA...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CCA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCTCATATTCTATACATaGATCTGGAGAATCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: HTARPTRIRVGRKLRLMSLIFYT*IWRIIS Trigger: ACTGATGATTCTCCAGATCCATGTATAGAATATGAG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CCA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCCTCATATTCTATACATaGATCTGGAGAATCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: CSAHPHQGRQEVAADEQLLIFYT*IWRIIS Trigger: ACTGATGATTCTCCAGATCCATGTATAGAATATGAG...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCAGCGGAGAACTGGCAGTaGAGCACATGCTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPAENWQ*STCSFF Trigger: GAAGAAGGAGCATGTGCTTCACTGCCAGTTCTCCGC...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCATGGATCATCCCTTCCTaGAACCACCAGAGTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPWIIPS*NHQSSI Trigger: GATGGAACTCTGGTGGTTTCAGGAAGGGATGATCCA...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR TCA 90 bp | GTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACCCAATATAAAAAGTGGCTaGTGTCCACACTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VNVHEYKKWLMSTLLGPPNIKSG*CPHCSA Trigger: GGCCGAGCAGTGTGGACATCAGCCACTTTTTATATT...GGGTGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCAAATATAAAAAGTGGCTaGTGTCCACACTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPNIKSG*CPHCSA Trigger: GGCCGAGCAGTGTGGACATCAGCCACTTTTTATATT...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR GCA 90 bp | GTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACCCTCACTTCACTGTTTGTaGAACGGAAAGCTGGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VNVHEYKKWLMSTLLGPPSLHCL*NGKLGN Trigger: ATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGA...GGGTGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCATTCATCATCACTGTCTaGCTGAGAATGTGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPFIITV*LRMCWW Trigger: CCACCAACACATTCTCAGCCAGACAGTGATGATGAA...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACATGAATATAAAAAGTaGCTGATGTCCACACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPHEYKK*LMSTLL Trigger: GAGCAGTGTGGACATCAGCCACTTTTTATATTCATG...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCATGTGACTTCACCAAATaGATTAAAGTCAATGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPCDFTK*IKVNEP Trigger: TGGCTCATTGACTTTAATCCATTTGGTGAAGTCACA...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS GCA 90 bp | CCTTCTTCATCCTCCAGCTGCCGCCGCTGCTGCCTTTCCCTCTCCTaGCTGCACCCTCCCGGAACTCTGGGCGCCGGCCCCGGAAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: PSSSSSCRRCCLSLS*LHPPGTLGAGPGSA Trigger: GGCACTTCCGGGGCCGGCGCCCAGAGTTCCGGGAGGGTGCAGGCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCTGGAGGATGAAGAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429258.6 ENST00000455773.7 |
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| CDS GCA 90 bp | CTCCTGCCTGCACCCTCCCGGAACTCTGGGCGCCGGCCCCGGAAGTaGCCGCCGAGCTATTTTGGTTCAAGGACTCTTCCGGTCCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLPAPSRNSGRRPRK*PPSYFGSRTLPVPK Trigger: CTTCGGGACCGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCAGAGTTCCGGGAGGGTGCAGGCAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429258.6 |
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| CDS CCA 90 bp | CAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCCCGGAGCGGTaGGGCGGGGCCTCCTCTTCTCCAGTTCCAGTACGCTCATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: QGRQEVAADEQLPER*GGASSSPVPVRSSV Trigger: GACTGATGAGCGTACTGGAACTGGAGAAGAGGAGGCCCCGCCCCACCGCTCCGGGAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281141.9 ENST00000440613.1 ENST00000498747.1 |
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| CDS-3UTR CAA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCAGGGTCGGCAGGAAGTaGCGGCTGATGAGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TARPTRIRVGRKLRLMSSRVGRK*RLMSSS Trigger: GGAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCT...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS-3UTR CAA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCAGGGTCGGCAGGAAGTaGCGGCTGATGAGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CSAHPHQGRQEVAADEQLRVGRK*RLMSSS Trigger: GGAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCT...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS CCA 90 bp | CCGGAACTCTGGGCGCCGGCCCCGGAAGTGCCCGCCGAGCTATTTTaGTTCAAGGACTCTTCCGGTCCCGAAGTGTCGAGAGAGGAATTT | + |
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Preference number: 5 (lower is better) Translates to: PELWAPAPEVPAELF*FKDSSGPEVSREEF Trigger: AAATTCCTCTCTCGACACTTCGGGACCGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCAGAGTTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429258.6 |
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| CDS-3UTR CAA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCCTGGCTGAGAATGTGTaGGTGGATCATCCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HTARPTRIRVGRKLRLMSLAENV*VDHPFL Trigger: CAGGAAGGGATGATCCACCAACACATTCTCAGCCAG...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CAA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCCTGTCACTTCACTGTTaGTGCAACGGAAAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CSAHPHQGRQEVAADEQLLSLHC*CNGKLG Trigger: CCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAG...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CAA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCGGAAGAATGACACTCTaGATGGTAACGCCTCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TARPTRIRVGRKLRLMSSGRMTL*MVTPRK Trigger: CTTCCGAGGCGTTACCATCAAGAGTGTCATTCTTCC...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CAA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTGGGGAATCCTGCTCTaGAGCGTCAACTTCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: TARPTRIRVGRKLRLMSSWGILL*SVNFTK Trigger: TTTAGTGAAGTTGACGCTCAAGAGCAGGATTCCCCA...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS TCA 90 bp | GAGCCACACCTTCCCCCTACTGTCTCTGTATATATCGAACACAACTaGACCCGGGAGGTGGAAGCTGCACGAGCCGCGATCGCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: EPHLPPTVSVYIEHN*TREVEAARAAIAPL Trigger: CAGTGGTGCGATCGCGGCTCGTGCAGCTTCCACCTCCCGGGTTCAGTTGTGTTCGATATATACAGAGACAGTAGGGGGAAGGTGTGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498747.1 |
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| CDS-3UTR CAA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCTCAGAGAACTATTCATaGCTATCCAATACGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: CSAHPHQGRQEVAADEQLSENYS*LSNTHP Trigger: GGGATGCGTATTGGATAGCAATGAATAGTTCTCTGA...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CAA 90 bp | TGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCTCATGAAATCGGAACTCTaGAAAAGCAGAAAGATGTCG | + |
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Preference number: 5 (lower is better) Translates to: CSAHPHQGRQEVAADEQLMKSEL*KSRKMS Trigger: CGACATCTTTCTGCTTTTCAAGAGTTCCGATTTCAT...GAGCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS-3UTR CAA 90 bp | CACACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCATTTCTCTTCTGCTCTaGAGCGTCAACTTCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: HTARPTRIRVGRKLRLMSISLLL*SVNFTK Trigger: TTTAGTGAAGTTGACGCTCAAGAGCAGAAGAGAAAT...GCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440613.1 |
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| CDS-3UTR CAA 90 bp | ACTGCTCGGCCCACCCGCATCAGGGTCGGCAGGAAGTTGCGGCTGATGAGCAGCAAATCGCCGTTTAAGTaGTTCTCAGATATCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TARPTRIRVGRKLRLMSSKSPFK*FSDISS Trigger: AGAACTGATATCTGAGAACAACTTAAACGGCGATTT...GCTGCTCATCAGCCGCAACTTCCTGCCGACCCTGATGCGGGTGGGCCGAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS CCA 90 bp | AGAGGTCTACAAAGTCCTTGGGTAGCCGGTAACTCAAATAGGGGCTaGGCTGGACTGTCACTTCACTGTTTGTGCAACGGAAAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RGLQSPWVAGNSNRG*AGLSLHCLCNGKLG Trigger: CCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACCGGCTACCCAAGGACTTTGTAGACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000455773.7 ENST00000497963.1 ENST00000498747.1 |
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| CDS GCA 90 bp | GGTAACTCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTTGTaGAACGGAAAGCTGGGGAATCCTGCTCTTGAGCGTCAACTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GNSNRGWAGLSLHCL*NGKLGNPALERQLH Trigger: GTGAAGTTGACGCTCAAGAGCAGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000497963.1 ENST00000498747.1 |
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| CDS-3UTR CAA 90 bp | GTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCACCCCTGCCCCCGAGGGAATaGATAGCTTCCTGGACTTTA | + |
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Preference number: 5 (lower is better) Translates to: VNVHEYKKWLMSTLLGPPLPPRE*IASWTL Trigger: TAAAGTCCAGGAAGCTATCAATTCCCTCGGGGGCAG...GGGTGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000281141.9 |
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| CDS GCA 90 bp | GGTAACTCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTTGTaGAACGGAAAGCTGGGGAATCCCTACTGTCTCTGTATATATCGA | + |
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Preference number: 5 (lower is better) Translates to: GNSNRGWAGLSLHCL*NGKLGNPYCLCIYR Trigger: TCGATATATACAGAGACAGTAGGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455773.7 |
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| CDS CCA 90 bp | TTAAGCTTAGGAAAGACACTGCCCCCGAGGGAATTGATAGCTTCCTaGACTTTAGTGGCAAACTCAGGAAATTCTGGTGCCGTAAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: LSLGKTLPPRELIAS*TLVANSGNSGAVSV Trigger: CACGCTTACGGCACCAGAATTTCCTGAGTTTGCCACTAAAGTCCAGGAAGCTATCAATTCCCTCGGGGGCAGTGTCTTTCCTAAGCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000455773.7 |
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| CDS TCA 90 bp | TCATCAGACCACTGTATTTCTTCTGCTTCATCATCACTGTCTGGCTaGGAATGTGTTGGTGGATCATCCCTTCCTGAAACCACCAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: SSDHCISSASSSLSG*ECVGGSSLPETTRV Trigger: AACTCTGGTGGTTTCAGGAAGGGATGATCCACCAACACATTCTCAGCCAGACAGTGATGATGAAGCAGAAGAAATACAGTGGTCTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000442050.5 ENST00000455773.7 |
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| CDS GCA 90 bp | TATTCACATCCCCTCTTGAGTAAAATCACCACCAGAGCAGAGACCTaGTCTCCTTACAGCCTTCTAACAATATACACACTTTCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: YSHPLLSKITTRAET*SPYSLLTIYTLSSK Trigger: CTTTGAAGAAAGTGTGTATATTGTTAGAAGGCTGTAAGGAGAGCAGGTCTCTGCTCTGGTGGTGATTTTACTCAAGAGGGGATGTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497963.1 |
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| CDS-3UTR CAA 90 bp | CAGGTGAATGTACATGAATATAAAAAGTGGCTGATGTCCACACTGCTCGGCCCAAAATCGCCGTTTAAGTaGTTCTCAGATATCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: QVNVHEYKKWLMSTLLGPKSPFK*FSDISS Trigger: AGAACTGATATCTGAGAACAACTTAAACGGCGATTT...TGGGCCGAGCAGTGTGGACATCAGCCACTTTTTATATTCATGTACATTCACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000281141.9 ENST00000440613.1 |
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| CDS GCA 72 bp | GCACCCTCCCGGAACTCTGGGCGCCGGCCCCGGAAGTaGCCGCCGAGCTATTTTGGTTCAAGGACTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: APSRNSGRRPRK*PPSYFGSRTLP Trigger: CGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCAGAGTTCCGGGAGGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429258.6 ENST00000455773.7 |
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| CDS CAA 72 bp | CTGGGCGCCGGCCCCGGAAGTGCCCGCCGAGCTATTTaGGTTCAAGGACTCTTCCGGTCCCGAAGTGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: LGAGPGSARRAI*VQGLFRSRSVE Trigger: CTCGACACTTCGGGACCGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429258.6 |
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| CDS CCA 72 bp | TGGGCGCCGGCCCCGGAAGTGCCCGCCGAGCTATTTTaGTTCAAGGACTCTTCCGGTCCCGAAGTGTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: WAPAPEVPAELF*FKDSSGPEVSR Trigger: TCTCGACACTTCGGGACCGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429258.6 |
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| CDS CAA 90 bp | CCCGGAACTCTGGGCGCCGGCCCCGGAAGTGCCCGCCGAGCTATTTaGGTTCAAGGACTCTTCCGGTCCCGAAGTGTCGAGAGAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: PGTLGAGPGSARRAI*VQGLFRSRSVERGI Trigger: AATTCCTCTCTCGACACTTCGGGACCGGAAGAGTCCTTGAACCAAAATAGCTCGGCGGGCACTTCCGGGGCCGGCGCCCAGAGTTCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429258.6 |
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| CDS TCA 72 bp | CTTCCCCCTACTGTCTCTGTATATATCGAACACAACTaGACCCGGGAGGTGGAAGCTGCACGAGCCGCGATC | + |
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Preference number: 6 (lower is better) Translates to: LPPTVSVYIEHN*TREVEAARAAI Trigger: GATCGCGGCTCGTGCAGCTTCCACCTCCCGGGTTCAGTTGTGTTCGATATATACAGAGACAGTAGGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498747.1 |
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| CDS GCA 72 bp | AATAGGGGCTGGGCTGGACTGTCACTTCACTGTTTGTaGAACGGAAAGCTGGGGAATCCTGCTCTTGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: NRGWAGLSLHCL*NGKLGNPALER Trigger: ACGCTCAAGAGCAGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000497963.1 ENST00000498747.1 |
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| CDS CAA 90 bp | GCCGGTAACTCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTaGTGCAACGGAAAGCTGGGGAATCCTGCTCTTGAGCGTCAACTT | + |
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Preference number: 6 (lower is better) Translates to: AGNSNRGWAGLSLHC*CNGKLGNPALERQL Trigger: AAGTTGACGCTCAAGAGCAGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000497963.1 ENST00000498747.1 |
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| CDS GCA 72 bp | AATAGGGGCTGGGCTGGACTGTCACTTCACTGTTTGTaGAACGGAAAGCTGGGGAATCCCTACTGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: NRGWAGLSLHCL*NGKLGNPYCLC Trigger: ACAGAGACAGTAGGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455773.7 |
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| CDS CCA 72 bp | CAAAGTCCTTGGGTAGCCGGTAACTCAAATAGGGGCTaGGCTGGACTGTCACTTCACTGTTTGTGCAACGGA | + |
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Preference number: 6 (lower is better) Translates to: QSPWVAGNSNRG*AGLSLHCLCNG Trigger: TCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACCGGCTACCCAAGGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000455773.7 ENST00000497963.1 ENST00000498747.1 |
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| CDS CAA 72 bp | TCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTaGTGCAACGGAAAGCTGGGGAATCCTGCTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SNRGWAGLSLHC*CNGKLGNPALE Trigger: CTCAAGAGCAGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000497963.1 ENST00000498747.1 |
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| CDS CAA 72 bp | TCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTaGTGCAACGGAAAGCTGGGGAATCCCTACTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SNRGWAGLSLHC*CNGKLGNPYCL Trigger: GAGACAGTAGGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455773.7 |
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| CDS CCA 72 bp | GGAAAGACACTGCCCCCGAGGGAATTGATAGCTTCCTaGACTTTAGTGGCAAACTCAGGAAATTCTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: GKTLPPRELIAS*TLVANSGNSGA Trigger: GGCACCAGAATTTCCTGAGTTTGCCACTAAAGTCCAGGAAGCTATCAATTCCCTCGGGGGCAGTGTCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000455773.7 |
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| CDS CAA 90 bp | GCCGGTAACTCAAATAGGGGCTGGGCTGGACTGTCACTTCACTGTTaGTGCAACGGAAAGCTGGGGAATCCCTACTGTCTCTGTATATAT | + |
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Preference number: 6 (lower is better) Translates to: AGNSNRGWAGLSLHC*CNGKLGNPYCLCIY Trigger: ATATATACAGAGACAGTAGGGATTCCCCAGCTTTCCGTTGCACAAACAGTGAAGTGACAGTCCAGCCCAGCCCCTATTTGAGTTACCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455773.7 |
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| CDS CAA 72 bp | CTTCTGCTTCATCATCACTGTCTGGCTGAGAATGTGTaGGTGGATCATCCCTTCCTGAAACCACCAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLHHHCLAENV*VDHPFLKPPEF Trigger: GAACTCTGGTGGTTTCAGGAAGGGATGATCCACCAACACATTCTCAGCCAGACAGTGATGATGAAGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000442050.5 ENST00000455773.7 |
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| CDS CAA 72 bp | CAATTAAGCTTAGGAAAGACACTGCCCCCGAGGGAATaGATAGCTTCCTGGACTTTAGTGGCAAACTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QLSLGKTLPPRE*IASWTLVANSG Trigger: TCCTGAGTTTGCCACTAAAGTCCAGGAAGCTATCAATTCCCTCGGGGGCAGTGTCTTTCCTAAGCTTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000455773.7 |
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| CDS TCA 72 bp | CACTGTATTTCTTCTGCTTCATCATCACTGTCTGGCTaGGAATGTGTTGGTGGATCATCCCTTCCTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: HCISSASSSLSG*ECVGGSSLPET Trigger: GGTTTCAGGAAGGGATGATCCACCAACACATTCTCAGCCAGACAGTGATGATGAAGCAGAAGAAATACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000429258.6 ENST00000442050.5 ENST00000455773.7 |
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| CDS TCA 72 bp | ATAGACTTTACCAGCTTAAGGAAGTCTATTAGCTTGTaGGCGTCCTCCCCAGTAGAGAGGTCTACAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: IDFTSLRKSISL*ASSPVERSTKS Trigger: GGACTTTGTAGACCTCTCTACTGGGGAGGACGCTCACAAGCTAATAGACTTCCTTAAGCTGGTAAAGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497963.1 |
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| CDS TCA 72 bp | GTTCTCAGATATCAGTTCTTCCCAGGTGAACAGCAGTaGATCTGTGACTTCACCAAATGGATTAAAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: VLRYQFFPGEQQ*ICDFTKWIKVN Trigger: ATTGACTTTAATCCATTTGGTGAAGTCACAGATTCACTGCTGTTCACCTGGGAAGAACTGATATCTGAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000440613.1 ENST00000497963.1 ENST00000498747.1 |
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| CDS CCA 72 bp | ACACCATTTTCGGAGAACGAGCTCATATTCTATACATaGATCTGGAGAATCATCAGTACAATGAATAAACGG | + |
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Preference number: 6 (lower is better) Translates to: TPFSENELIFYT*IWRIISTMNKR Trigger: CCGTTTATTCATTGTACTGATGATTCTCCAGATCCATGTATAGAATATGAGCTCGTTCTCCGAAAATGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000281141.9 ENST00000378900.6 ENST00000442050.5 ENST00000455773.7 ENST00000498747.1 |
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| CDS CAA 72 bp | GGATATCTGCTCAGCAGGTGTAATTTTCTAGAGGTCTaGGCAAAGGATGTAATTAAAAATTGTCATGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GYLLSRCNFLEV*AKDVIKNCHGK Trigger: TTTTCCATGACAATTTTTAATTACATCCTTTGCCAAGACCTCTAGAAAATTACACCTGCTGAGCAGATATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000497963.1 |
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