RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD99L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000102181

Ensembl transcript IDs: ENST00000346693.8, ENST00000355149.8, ENST00000370377.8, ENST00000418547.2, ENST00000437787.6, ENST00000466436.5, ENST00000491877.1, ENST00000613030.4, ENST00000634795.1

Found 1035 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCGGGCTGGTTCGGGCGGCGGCGGCGG +
Preference number: 1 (lower is better)
Translates to: GSRVTSGGTIVHACS*TGPSDPGWFGRRRR
Trigger: CCGCCGCCGCCGCCCGAACCAGCCCGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 90 bp CGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTG +
Preference number: 1 (lower is better)
Translates to: RWHRAAQQLRVQMKG*GEPGDKRWHHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 90 bp TCCAGCCCAAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCACGGTGAGCATGGCTCCCCACGCACT +
Preference number: 1 (lower is better)
Translates to: SSPNQAAPRQVRGES*GSCVCHGEHGSPRT
Trigger: AGTGCGTGGGGAGCCATGCTCACCGTGGCAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTTGGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp AGAACTTCTTCTGCTGGTAGGAGATGTAGCTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGCTGGCCACCCCGGCAATGGTGCCAG +
Preference number: 1 (lower is better)
Translates to: RTSSAGRRCSWRRHR*GPWPGRWPPRQWCQ
Trigger: CTGGCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCAGCTACATCTCCTACCAGCAGAAGAAGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR TCA 90 bp GTCTTCCAGGCATGTCCAGTCACTAGGAGCTGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTTTGTGCAGAAAGCACCCGGGGCGGG +
Preference number: 1 (lower is better)
Translates to: VFQACPVTRSCHRWA*VPGSRLCAESTRGG
Trigger: CCCGCCCCGGGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGACATGCCTGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GAAACCAGCTCTGCTCCAGCCCAAACCAGGCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTTCCTGTGTTTGCCACGGTGAGCATG +
Preference number: 1 (lower is better)
Translates to: ETSSAPAQTRQLHAR*GASHGVPVFATVSM
Trigger: CATGCTCACCGTGGCAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTTGGGCTGGAGCAGAGCTGGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp GGGCCGAGCAGGAAAAGGGGTGGTAAGGAGCTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAA +
Preference number: 1 (lower is better)
Translates to: GPSRKRGGKELKGTH*EWPHKAALRRTGLQ
Trigger: TTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAGCTCCTTACCACCCCTTTTCCTGCTCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp GTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: VAQQLPRLVLAFYQS*LLNFGTKSQHAWGR
Trigger: CCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR TCA 90 bp AGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: SSSRGWCWLSIRAGS*ISAPSLSTLGAGQR
Trigger: TCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 90 bp AACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGG +
Preference number: 1 (lower is better)
Translates to: NTQSSSGKLRPTRSR*HRAAQQLRVQMKGW
Trigger: CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 90 bp AGCAGGAAAAGGGGTGGTAAGGAGCTCAAGGGCACGCACTGGGAATaGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGACC +
Preference number: 1 (lower is better)
Translates to: SRKRGGKELKGTHWE*PHKAALRRTGLQLT
Trigger: GGTCAGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAGCTCCTTACCACCCCTTTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp GCCCAGCACCAGCCAGAGGGTGGGGCCATCGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCA +
Preference number: 1 (lower is better)
Translates to: AQHQPEGGAIGSRHT*YQGGTSLTKFTIWP
Trigger: TGGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp ACCATAAAGGTAAAGTGGACAACCCCTGAGGTCACGCTGTCCAGGTaGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCGG +
Preference number: 1 (lower is better)
Translates to: TIKVKWTTPEVTLSR*RQATHAKILHSHLR
Trigger: CCGGAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp TTTCAAGGACTTAGCCATCCGACAGGCCTCACCATAAAGGTAAAGTaGACAACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACG +
Preference number: 1 (lower is better)
Translates to: FQGLSHPTGLTIKVK*TTPEVTLSRWRQAT
Trigger: CGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGTGAGGCCTGTCGGATGGCTAAGTCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GAGCATGGCTCCCCACGCACTCTCCCTCAGAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCG +
Preference number: 1 (lower is better)
Translates to: EHGSPRTLPQSRQVG*PQSYKVTCVSLNQA
Trigger: CGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTCTGAGGGAGAGTGCGTGGGGAGCCATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp TGGGAAGGAGAAGCTCCTGAAATGAACGTTCTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGTCCAGTCACTAGGAGCTGCCACCGG +
Preference number: 1 (lower is better)
Translates to: WEGEAPEMNVLQTEG*GVFQACPVTRSCHR
Trigger: CCGGTGGCAGCTCCTAGTGACTGGACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAGAACGTTCATTTCAGGAGCTTCTCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 90 bp AGACGCACAGGGCTACAACTGACCACCCTCCACCACAGGCATGTTTaGAAAACGAACACGAGGCATGCGTTAGACAGATGCATGTGGGGG +
Preference number: 1 (lower is better)
Translates to: RRTGLQLTTLHHRHV*KTNTRHALDRCMWG
Trigger: CCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTGGGTGCTGCGTGTGTGTGGTGTTAC +
Preference number: 1 (lower is better)
Translates to: GSPEAQQHKTWDGED*SETIILGAACVWCY
Trigger: GTAACACCACACACACGCAGCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp GAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTaGACAGCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAG +
Preference number: 1 (lower is better)
Translates to: ETGVGSSHSADNPAQ*TAYETHGAIMQTKE
Trigger: CTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GGAAACAGGCCAATCCTGCAAGCCACCCCACCCTTACTAACTTCCTaGAGCATGGGAAGCTTCTCGAGACCAGGCCAAGGTTTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: GNRPILQATPPLLTS*SMGSFSRPGQGFFP
Trigger: AGGAAAGAAACCTTGGCCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 90 bp ACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: TIPLSGQPMKRMGPS*RPKRPVSFVRSCLS
Trigger: AGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp ATGTGGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTGGAGTTaGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTA +
Preference number: 1 (lower is better)
Translates to: MWGLQIPVVSLRNWS*LIPLSRQSRSVDSL
Trigger: TAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp AGATGCATGTGGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTaGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGAC +
Preference number: 1 (lower is better)
Translates to: RCMWGLQIPVVSLRN*SWLIPLSRQSRSVD
Trigger: GTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACATGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp AAGCCTGACAAAGTTCACAATCTGGCCAATGAGTGTGGGAGGCCCTaGAAACAGGCCAATCCTGCAAGCCACCCCACCCTTACTAACTTC +
Preference number: 1 (lower is better)
Translates to: KPDKVHNLANECGRP*KQANPASHPTLTNF
Trigger: GAAGTTAGTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGAACTTTGTCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp TATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCAT +
Preference number: 1 (lower is better)
Translates to: YQSWLLNFGTKSQHA*GRAEKPNSQTPRAH
Trigger: ATGAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 90 bp CATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTaGCCAATGAGTGTGGGAGGCCCTGGAAACAGGCCAATCCTGCAA +
Preference number: 1 (lower is better)
Translates to: HTWYQGGTSLTKFTI*PMSVGGPGNRPILQ
Trigger: TTGCAGGATTGGCCTGTTTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp CCAGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTaGGAAGGAGAAGCTCCTGAAATGAACGTTCTGCAAACAGAAGGC +
Preference number: 1 (lower is better)
Translates to: PGFCRWQCRASVRCL*EGEAPEMNVLQTEG
Trigger: GCCTTCTGTTTGCAGAACGTTCATTTCAGGAGCTTCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp CTCAAGGCAGGACTATCACGAGATGCATGTTTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATA +
Preference number: 1 (lower is better)
Translates to: LKAGLSRDACLYLNH*KPPLGPALRKPSNI
Trigger: TATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp ATCACGAGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGG +
Preference number: 1 (lower is better)
Translates to: ITRCMFVLKSLKASA*TGSPEAQQHKTWDG
Trigger: CCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCTCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp CTCATGTCAACCCGAAGGCCACACCCAGCCCCCTATGGAATCAGATaGGAAACAGGCCTACGAATTGCTTCATACTTATCCGGAAGATTC +
Preference number: 1 (lower is better)
Translates to: LMSTRRPHPAPYGIR*ETGLRIASYLSGRF
Trigger: GAATCTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCTTCGGGTTGACATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GCCACGCACACCTCCTTCCGCCCAGCTTTATCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCTCAGAGTTGTTACAAATTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: ATHTSFRPALSFLEL*LHPACAQSCYKFSL
Trigger: CAGAGAAAATTTGTAACAACTCTGAGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGATAAAGCTGGGCGGAAGGAGGTGTGCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 90 bp ACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTaGTTCATACTTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: TPSPLWNQMGNRPTN*FILIRKIPKLSRQD
Trigger: GTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 90 bp CACAGGCATGTTTGCAAAACGAACACGAGGCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTGG +
Preference number: 1 (lower is better)
Translates to: HRHVCKTNTRHALDR*MWGLQIPVVSLRNW
Trigger: CCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATGCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp AAAGACCTTTCTCATGTCAACCCGAAGGCCACACCCAGCCCCCTATaGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACTTATC +
Preference number: 1 (lower is better)
Translates to: KDLSHVNPKATPSPL*NQMGNRPTNCFILI
Trigger: GATAAGTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCTTCGGGTTGACATGAGAAAGGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 90 bp CATGTTTGCAAAACGAACACGAGGCATGCGTTAGACAGATGCATGTaGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTGGAGTTGG +
Preference number: 1 (lower is better)
Translates to: HVCKTNTRHALDRCM*GLQIPVVSLRNWSW
Trigger: CCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 90 bp TTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATaGATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGC +
Preference number: 1 (lower is better)
Translates to: LSGRFLSSQGRTITR*MFVLKSLKASAWTG
Trigger: GCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 90 bp GTAAAGATATTGAGGCCCATAAGAAATTTCTTTGTAGGCAAATTGTaGGGGAGGCGTGCAGCTTTTTCCATCTTTGCAGCTATCTTATTT +
Preference number: 1 (lower is better)
Translates to: VKILRPIRNFFVGKL*GRRAAFSIFAAILF
Trigger: AAATAAGATAGCTGCAAAGATGGAAAAAGCTGCACGCCTCCCTCACAATTTGCCTACAAAGAAATTTCTTATGGGCCTCAATATCTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418547.2
3UTR CCA 90 bp GCCATTTTATTTAATGCAAACACTAGACAGTTTACAAGTCACACCTaGACACAAGCACGTGAACAGATGTACAGGGAATTCTGGAATTTT +
Preference number: 1 (lower is better)
Translates to: AILFNANTRQFTSHT*TQAREQMYREFWNF
Trigger: AAAATTCCAGAATTCCCTGTACATCTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAACTGTCTAGTGTTTGCATTAAATAAAATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp GGGCGCTGGCCACCCCGGCAATGGTGCCAGGCTCTGCCACCATGCCTGATGCAGACTACCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 2 (lower is better)
Translates to: GRWPPRQWCQALPPCLMQTTWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGT...CTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR TCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR GCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCAGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 2 (lower is better)
Translates to: SVHCVSPLAWDRPMLASAAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 2 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLLKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: TLSRWRQATHAKILHSHLPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp CAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTaGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QQLPRLVLAFYQSWL*NFGTKSQHAWGRAE
Trigger: CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CAA 90 bp CGCATCCTGTGCTCAGTAAAGCTGGAGGCAGGCTGGCTTTGGGAGTaGGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAG +
Preference number: 2 (lower is better)
Translates to: RILCSVKLEAGWLWE*VAQQLPRLVLAFYQ
Trigger: CTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTTTACTGAGCACAGGATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp AAGGAGCTCAAGGGCACGCACTGGGAATGGCCTCACAAGGCAGCCTaGAGACGCACAGGGCTACAACTGACCACCCTCCACCACAGGCAT +
Preference number: 2 (lower is better)
Translates to: KELKGTHWEWPHKAA*RRTGLQLTTLHHRH
Trigger: ATGCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp GGCCCAGCACCAGCCAGAGGGTGGGGCCATCGGTTCTCGACATACTaGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCC +
Preference number: 2 (lower is better)
Translates to: GPAPARGWGHRFSTY*VSGRDKPDKVHNLA
Trigger: GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp ACCCCGGCAATGGTGCCAGGCTCTGCCACCATGCCTGATGCAGTTTCTAGCTTGATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 2 (lower is better)
Translates to: TPAMVPGSATMPDAVSSLIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...CAAGCTAGAAACTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGTGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTCTT +
Preference number: 2 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLWLWWW*CGPMAL
Trigger: AAGAGCCATGGGACCACACCACCACCACCACAACCA...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCTCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 2 (lower is better)
Translates to: TPEVTLSRWRQATHAKILSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR GCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 2 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR-3UTR CCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGGCCTATTGGTTGTGGTaGTGGTGGTGTGGTCCCATG +
Preference number: 2 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMAYWLW*WWCGPM
Trigger: CATGGGACCACACCACCACCACCACAACCAATAGGC...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CAA 90 bp TACCTGGAGGTTTTGCCGGAGCTCTGGTGGTTCCTGGCCTATTGGTaGTGGTGGTGGTGGTGTGGTCCCATGGCTCTTGTTCCAAGGACT +
Preference number: 2 (lower is better)
Translates to: YLEVLPELWWFLAYW*WWWWCGPMALVPRT
Trigger: AGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAACCTCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 2 (lower is better)
Translates to: HPAPYGIRWETGLRIASYLKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCGACAATCCCGCTCAGTaGACAGCCTATGAAACGCAT +
Preference number: 2 (lower is better)
Translates to: TLSRWRQATHAKILHSHLDNPAQ*TAYETH
Trigger: ATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTC...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp GAGACGCACAGGGCTACAACTGACCACCCTCCACCACAGGCATGTTaGCAAAACGAACACGAGGCATGCGTTAGACAGATGCATGTGGGG +
Preference number: 2 (lower is better)
Translates to: ETHRATTDHPPPQAC*QNEHEACVRQMHVG
Trigger: CCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACCTCACAAGGCAGCCTTaGGACGCACAGGGCTACAAC +
Preference number: 2 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHLTRQP*DAQGYN
Trigger: GTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAG...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: HPAPYGIRWETGLRIASYGPRIL*SVKLEA
Trigger: TGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCC...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGCCAAATCCACACTACTaGAACGCTGGCTCCACAAGG +
Preference number: 2 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVPNPHY*NAGSTR
Trigger: CCTTGTGGAGCCAGCGTTCCAGTAGTGTGGATTTGG...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp GCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGACCACCCTCCACCAGTCGTGGTGGTTACATaGTTCCATCTCTCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ASQGSLETHRATTDHPPPVVVVT*FHLSLP
Trigger: AGGAAGAGAGAGATGGAACCATGTAACCACCACGAC...TGGTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 2 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACCTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCA +
Preference number: 2 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHLKGTH*EWPHKA
Trigger: TGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAG...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp CATGTGGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTGGAGTaGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCT +
Preference number: 2 (lower is better)
Translates to: HVGAADSSGFLKKLE*AHPTQQTIPLSGQP
Trigger: AGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGTCAGTGGACAGCCTATaGAACGCATGGGGCCATCAT +
Preference number: 2 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRSVDSL*NAWGHH
Trigger: ATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGA...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGATCACAATCTGGCCAATaGGTGTGGGAGGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRSQSGQ*VWEALE
Trigger: TTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGA...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGACTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGT +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRLQTEG*GVFQAC
Trigger: ACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAG...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp CAGCAGACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATGCCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: QQTIPLSGQPMKRMGPSCLLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...GCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 2 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp GAGCAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAAGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 2 (lower is better)
Translates to: EQTSRLTTELQSHLRFTKGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...TTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCCCTATGGAATCAGATaGGAAACAGGCCTACGAATT +
Preference number: 2 (lower is better)
Translates to: TLSRWRQATHAKILHSHLPYGIR*ETGLRI
Trigger: AATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGG...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGACTAGACCCTAGCATGTaGTTCTGTCCCGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRLDPSM*FCPVSL
Trigger: GAGGCTCACGGGACAGAACCACATGCTAGGGTCTAG...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTaGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: LSELALEFRHQVSAR*GQGRETKLTNTQSS
Trigger: TGAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR-3UTR GCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACACACCCAGCCCCCTATaGAATCAGATGGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHTPSPL*NQMGNR
Trigger: CCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGACTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRLLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCTGGCAATACAGGTCATaGCCAAATCCACACTACTGG +
Preference number: 2 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLWQYRS*PNPHYW
Trigger: CCAGTAGTGTGGATTTGGCCATGACCTGTATTGCCA...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CCA 90 bp AGATGGGAAACAGGCCTACGAATTGCTTCATACTTATCCGGAAGATTCCTAAGCGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 2 (lower is better)
Translates to: RWETGLRIASYLSGRFLSGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...GCTTAGGAATCTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTTTCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 90 bp AGCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTaGTCCCCTAAGCATAAATGTCATCAGGCCTCAGCATCATCTTGG +
Preference number: 2 (lower is better)
Translates to: SHSSVQGSQSLEFKL*SPKHKCHQASASSW
Trigger: CCAAGATGATGCTGAGGCCTGATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp CGTGAGCCTCTGACAACAGAGCTCACCGGGACAGAACCATATGTGGGCCAAAGGAATGGGGGAAGAATGTaGACAATTTACCAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: REPLTTELTGTEPYVGQRNGGRM*TIYQRG
Trigger: GCCTCTTTGGTAAATTGTTCACATTCTTCCCCCATT...CCTTTGGCCCACATATGGTTCTGTCCCGGTGAGCTCTGTTGTCAGAGGCTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR TCA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGTGTGGTTCTGTCCCGTaGGCCTCTGACAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWCGSVP*ASDNRA
Trigger: AGCTCTGTTGTCAGAGGCTCACGGGACAGAACCACA...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTGGACAGAACCATATGTaGGCCAAAGGAACATTCCAG +
Preference number: 2 (lower is better)
Translates to: AYETHGAIMQTKEAREFCGQNHM*AKGTFQ
Trigger: CTGGAATGTTCCTTTGGCCCACATATGGTTCTGTCC...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGGACAGAACCATATGTaGGCCAAAGGAACATTCCAG +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRGQNHM*AKGTFQ
Trigger: CTGGAATGTTCCTTTGGCCCACATATGGTTCTGTCC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAACCATAAAGGTAAAGTaGACAACCCCTGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRTIKVK*TTPEVT
Trigger: CGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGT...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAACACTCAGACATTTACTaGATGCATACTATGGCATAC +
Preference number: 2 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEHSDIY*MHTMAY
Trigger: GTATGCCATAGTATGCATTCAGTAAATGTCTGAGTG...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR TCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAGCTACAAAGTCACCTaGGTTTCACTAAACCAAGCG +
Preference number: 2 (lower is better)
Translates to: AYETHGAIMQTKEAREFCSYKVT*VSLNQA
Trigger: CGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCT...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGACTGAATGCATACTATaGCATACCGTGCAGTGCTTA +
Preference number: 2 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRTECIL*HTVQCL
Trigger: TAAGCACTGCACGGTATGCCATAGTATGCATTCAGT...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR TCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR GCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGAGTTTTGTAAGATCCTaGCTGTCTGGTGACTCATAT +
Preference number: 2 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRSFVRS*LSGDSY
Trigger: ATATGAGTCACCAGACAGGCAGGATCTTACAAAACT...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCG +
Preference number: 2 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPLYLNH*KPPLGP
Trigger: CGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR TCA 90 bp AGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATGTTTGTACTTAAATGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: RFLSSQGRTITRCMFVLKWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...TTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCGATAAAATTCAGTGTTaGCGTGGGTCTGGGAAAACA +
Preference number: 2 (lower is better)
Translates to: TELQSHLRFTKPSECLFPDKIQC*RGSGKT
Trigger: TGTTTTCCCAGACCCACGCCAACACTGAATTTTATC...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR GCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCCAGACATTTACTGAATaGATACTATGGCATACCGTG +
Preference number: 2 (lower is better)
Translates to: TELQSHLRFTKPSECLFPQTFTE*ILWHTV
Trigger: CACGGTATGCCATAGTATGCATTCAGTAAATGTCTG...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp GGGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATaGCTGCAGCTGGACAGGGCCCTCAGATCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: GEPGDKRWHHCA*LQLDRALRSGL
Trigger: CAGCCCGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR TCA 72 bp TCTGCTGGTAGGAGATGTAGCTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGCTGGCCACCCCGGCAA +
Preference number: 3 (lower is better)
Translates to: SAGRRCSWRRHR*GPWPGRWPPRQ
Trigger: TTGCCGGGGTGGCCAGCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCAGCTACATCTCCTACCAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp GGGCCATGGCCAGGGCGCTGGCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGCCTGATGCAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: GPWPGRWPPRQW*QALPPCLMQFL
Trigger: TAGAAACTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp GTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCGGGCTGGTTCGGGCGG +
Preference number: 3 (lower is better)
Translates to: VTSGGTIVHACS*TGPSDPGWFGR
Trigger: CCGCCCGAACCAGCCCGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCAGATCCGGGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: SRVTSGGTIVHA*SWTGPSDPGWF
Trigger: GAACCAGCCCGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR TCA 72 bp TCTGCTCCAGCCCAAACCAGGCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTTCCTGTGTTTGCCACG +
Preference number: 3 (lower is better)
Translates to: SAPAQTRQLHAR*GASHGVPVFAT
Trigger: CGTGGCAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTTGGGCTGGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp AGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAGCGGTGGCACCATTGT +
Preference number: 3 (lower is better)
Translates to: RAAQQLRVQMKG*GEPGDKRWHHC
Trigger: ACAATGGTGCCACCGCTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 72 bp CCCCGCATCCTGTGCTCAGTAAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCTCAGCAGCTCCCGAGG +
Preference number: 3 (lower is better)
Translates to: PRILCSVKLEAG*LWELVAQQLPR
Trigger: CCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTTTACTGAGCACAGGATGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp AACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCACGGTGAGCATGGCTCC +
Preference number: 3 (lower is better)
Translates to: NQAAPRQVRGES*GSCVCHGEHGS
Trigger: GGAGCCATGCTCACCGTGGCAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GTCCAGTCACTAGGAGCTGCCACCGGTGGGCTTGAGTaGCAGGCTCTAGGCTTTGTGCAGAAAGCACCCGGG +
Preference number: 3 (lower is better)
Translates to: VQSLGAATGGLE*QALGFVQKAPG
Trigger: CCCGGGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp GCGGCGGCGGCGGCTCTGCAGACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTTCCTCACATACCACGG +
Preference number: 3 (lower is better)
Translates to: AAAAALQTACAT*SISLGVPHIPR
Trigger: CCGTGGTATGTGAGGAACCCCAAGTGAAATACTCCACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp AGGGGTGGTAAGGAGCTCAAGGGCACGCACTGGGAATaGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTA +
Preference number: 3 (lower is better)
Translates to: RGGKELKGTHWE*PHKAALRRTGL
Trigger: TAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAGCTCCTTACCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp CAGCAGACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATGCGGCCTCAGCATCATCTaGGCCCCCGCATCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: QQTIPLSGQPMKRMGPSCGLSII*APASCA
Trigger: AGCACAGGATGCGGGGGCCAAGATGATGCTGAGGCC...GCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp GCATGTCCAGTCACTAGGAGCTGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTTTGTGCAGAAAGCACC +
Preference number: 3 (lower is better)
Translates to: ACPVTRSCHRWA*VPGSRLCAEST
Trigger: GGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp ATCAGGCCTCAGCATCATCTTGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCAGGCTGGCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: IRPQHHLGPRIL*SVKLEAGWLWE
Trigger: CTCCCAAAGCCAGCCTGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCCAAGATGATGCTGAGGCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGCAAGCGGTGGCACCATaGTGCATGCCTGCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRQAVAP*CMPAAG
Trigger: TCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTG...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GAGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAGTGTGCAGGGGTCACA +
Preference number: 3 (lower is better)
Translates to: EATVRGCLLAET*HNEPLQCAGVT
Trigger: TGTGACCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp AGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATG +
Preference number: 3 (lower is better)
Translates to: SSSGKLRPTRSR*HRAAQQLRVQM
Trigger: CATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
3UTR CCA 72 bp AGGAAAAGGGGTGGTAAGGAGCTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCAGCCTTGAGACGCACA +
Preference number: 3 (lower is better)
Translates to: RKRGGKELKGTH*EWPHKAALRRT
Trigger: TGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAGCTCCTTACCACCCCTTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp GTAAAGTGGACAACCCCTGAGGTCACGCTGTCCAGGTaGCGACAGGCCACGCATGCCAAAATCCTCCATAGC +
Preference number: 3 (lower is better)
Translates to: VKWTTPEVTLSR*RQATHAKILHS
Trigger: GCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGTTGTCCACTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACGGCCTCAGCATCATCTaGGCCCCCGCATCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: HPAPYGIRWETGLRIASYGLSII*APASCA
Trigger: AGCACAGGATGCGGGGGCCAAGATGATGCTGAGGCC...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp CCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTATaGAACGCATGGGGCCATCATGCAGACCAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: PLSRQSRSVDSL*NAWGHHADQRG
Trigger: GCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GTTTCTTTCCTTCATGGCACCACGCAGAGGCATTTCTaGAGTGCTGCAGGTCCCCCTTCAGCCACACAGTCC +
Preference number: 3 (lower is better)
Translates to: VSFLHGTTQRHF*SAAGPPSATQS
Trigger: GGACTGTGTGGCTGAAGGGGGACCTGCAGCACTGCAGAAATGCCTCTGCGTGGTGCCATGAAGGAAAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp GTGGTTCCTGGCCTATTGGTTGTGGTGGTGGTGGTGTaGTCCCATGGCTCTTGTTCCAAGGACTGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: VVPGLLVVVVVV*SHGSCSKDCAE
Trigger: CTCAGCACAGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGGCCAGGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp CTCTGGTGGTTCCTGGCCTATTGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTCTTGTTCCAAGGACTGTG +
Preference number: 3 (lower is better)
Translates to: LWWFLAYWLWWW*CGPMALVPRTV
Trigger: CACAGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGGCCAGGAACCACCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp GAGCTCTGGTGGTTCCTGGCCTATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCTCTTGTTCCAAGGACT +
Preference number: 3 (lower is better)
Translates to: ELWWFLAYWLWW*WCGPMALVPRT
Trigger: AGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGGCCAGGAACCACCAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp AGTCCAATCCACTACCTGGAGGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGGTTGTGGTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: SPIHYLEVLPEL*WFLAYWLWWWW
Trigger: CCACCACCACCACAACCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGTGGATTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp GTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTaGACAGCCTATGAAACGCATGGGGCCATCATGCAG +
Preference number: 3 (lower is better)
Translates to: VGSSHSADNPAQ*TAYETHGAIMQ
Trigger: CTGCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp ACACATGGTGACCAGAGCCCGCCAGGCTTCTGCAGGTaGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: THGDQSPPGFCR*QCRASVRCLWE
Trigger: TTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCTGGCGGGCTCTGGTCACCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGAGGTTTATGTGTGATTaGTCCATGGCTGTAGCCCCA +
Preference number: 3 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLRFMCD*SMAVAP
Trigger: TGGGGCTACAGCCATGGACAAATCACACATAAACCT...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CAA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGCACTACCTGGAGGTTTaGCCGGAGCTCTGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: AIMQTKEAREFCKILPVWHYLEV*PELWWF
Trigger: GAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGTG...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CAA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACCAAGTCTCAGCACGCTaGGGGCAGGGCAGAGAAACC +
Preference number: 3 (lower is better)
Translates to: HPAPYGIRWETGLRIASYQVSAR*GQGRET
Trigger: GGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTG...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp CAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCACCTTTACCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: QDSETHQIQGRH*CRTGHHLYPCQ
Trigger: CTGACAAGGGTAAAGGTGATGGCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp CAGCCAGAGGGTGGGGCCATCGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGCCTGACAAAGTTCACA +
Preference number: 3 (lower is better)
Translates to: QPEGGAIGSRHT*YQGGTSLTKFT
Trigger: TGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACCGATGGCCCCACCCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp GGTGTGGTCCCATGGCTCTTGTTCCAAGGACTGTGCTaGGTGCTTCACATGGCTCCTCCCATGTCATCCTTA +
Preference number: 3 (lower is better)
Translates to: GVVPWLLFQGLC*VLHMAPPMSSL
Trigger: TAAGGATGACATGGGAGGAGCCATGTGAAGCACTCAGCACAGTCCTTGGAACAAGAGCCATGGGACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR TCA 72 bp TCCCCACGCACTCTCCCTCAGAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTCACCTGCGTTTCACTA +
Preference number: 3 (lower is better)
Translates to: SPRTLPQSRQVG*PQSYKVTCVSL
Trigger: TAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTCTGAGGGAGAGTGCGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTTTACCCTTGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: DSETHQIQGRHC*RTGHHLYPCQV
Trigger: AACCTGACAAGGGTAAAGGTGATGGCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp CCACCACAGGCATGTTTGCAAAACGAACACGAGGCATaGGTTAGACAGATGCATGTGGGGGCTGCAGATTCC +
Preference number: 3 (lower is better)
Translates to: PPQACLQNEHEA*VRQMHVGAADS
Trigger: GGAATCTGCAGCCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GGGCTACAACTGACCACCCTCCACCACAGGCATGTTTaGAAAACGAACACGAGGCATGCGTTAGACAGATGC +
Preference number: 3 (lower is better)
Translates to: GLQLTTLHHRHV*KTNTRHALDRC
Trigger: GCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTGGAGGGTGGTCAGTTGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp TCTCATGTCAACCCGAAGGCCACACCCAGCCCCCTATaGAATCAGATGGGAAACAGGCCTACGAATTGCTTC +
Preference number: 3 (lower is better)
Translates to: SHVNPKATPSPL*NQMGNRPTNCF
Trigger: GAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCTTCGGGTTGACATGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp TGGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAACTaGAGTTGGCTCATCCCACTCAGCAGACAATCCCGC +
Preference number: 3 (lower is better)
Translates to: WGLQIPVVSLRN*SWLIPLSRQSR
Trigger: GCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp TATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTaGCCAATGAGTGTGGGAGGCCCTGGAAACAGGCCA +
Preference number: 3 (lower is better)
Translates to: YQGGTSLTKFTI*PMSVGGPGNRP
Trigger: TGGCCTGTTTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp GGACTATCACGAGATGCATGTTTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCGGCTCTCCGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: GLSRDACLYLNH*KPPLGPALRKP
Trigger: GGGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCTCGTGATAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp GAAGCTCCTGAAATGAACGTTCTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGTCCAGTCACTAGGAGC +
Preference number: 3 (lower is better)
Translates to: EAPEMNVLQTEG*GVFQACPVTRS
Trigger: GCTCCTAGTGACTGGACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAGAACGTTCATTTCAGGAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp TGGTCCCATGGCTCTTGTTCCAAGGACTGTGCTGAGTaGTTCACATGGCTCCTCCCATGTCATCCTTACAGT +
Preference number: 3 (lower is better)
Translates to: WSHGSCSKDCAE*FTWLLPCHPYS
Trigger: ACTGTAAGGATGACATGGGAGGAGCCATGTGAAGCACTCAGCACAGTCCTTGGAACAAGAGCCATGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp TACCACGGCTTCCAGGTTCTCTCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAATGCTGAAGCAGAACTT +
Preference number: 3 (lower is better)
Translates to: YHGFQVLSLHVV*VETLLNAEAEL
Trigger: AAGTTCTGCTTCAGCATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGAGAGAACCTGGAAGCCGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR GCA 72 bp CTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCC +
Preference number: 3 (lower is better)
Translates to: LSGQPMKRMGPS*RPKRPVSFVRS
Trigger: GGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GGGAGAGCAAAATGGGTCTCTCTCAACTGCAGTCAGTaGTCCTGGGAACACGGTCTCACAGACAGCACATAT +
Preference number: 3 (lower is better)
Translates to: GRAKWVSLNCSQ*SWEHGLTDSTY
Trigger: ATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGACCCATTTTGCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp GGCTCTTGTTCCAAGGACTGTGCTGAGTGCTTCACATaGCTCCTCCCATGTCATCCTTACAGTGATCCTAGG +
Preference number: 3 (lower is better)
Translates to: GSCSKDCAECFT*LLPCHPYSDPR
Trigger: CCTAGGATCACTGTAAGGATGACATGGGAGGAGCCATGTGAAGCACTCAGCACAGTCCTTGGAACAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp CTGGAGCTCTGGTGGTTACTGGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCTCTCTTCCTCCTATAC +
Preference number: 3 (lower is better)
Translates to: LELWWLLASWSW*LHGSISLFLLY
Trigger: GTATAGGAGGAAGAGAGAGATGGAACCATGTAACCACCACGACCAAGAGGCCAGTAACCACCAGAGCTCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp ACCCGAAGGCCACACCCAGCCCCCTATGGAATCAGATaGGAAACAGGCCTACGAATTGCTTCATACTTATCC +
Preference number: 3 (lower is better)
Translates to: TRRPHPAPYGIR*ETGLRIASYLS
Trigger: GGATAAGTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCTTCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGTGTGTGTGGTGTTACTaGGTGCTGACCGGTTCGCTC +
Preference number: 3 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWCVWCY*VLTGSL
Trigger: GAGCGAACCGGTCAGCACCAAGTAACACCACACACA...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp GCAAAATGGGTCTCTCTCAACTGCAGTCAGTGCTCCTaGGAACACGGTCTCACAGACAGCACATATTCTACG +
Preference number: 3 (lower is better)
Translates to: AKWVSLNCSQCS*EHGLTDSTYST
Trigger: CGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGACCCATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp AGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATGTTTGTACTTAAAACTGAAAGCCTCCGCTaGGACCGGCTCTCCGGAAGC +
Preference number: 3 (lower is better)
Translates to: RFLSSQGRTITRCMFVLKTESLR*DRLSGS
Trigger: GCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAGT...TTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCACCACAGGCATGTTaGCAAAACGAACACGAGGCA +
Preference number: 3 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWPPQAC*QNEHEA
Trigger: TGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTGG...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp GTTTGCAAAACGAACACGAGGCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATTCCAGTGGTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: VCKTNTRHALDR*MWGLQIPVVSL
Trigger: TAAGGAAACCACTGGAATCTGCAGCCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR GCA 72 bp TTACATAAGCAATTGGGCAGAGGAAGCAACCAGAGATaGATTTGTATCAGGGGAGCAGAGGGACGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LHKQLGRGSNQR*ICIRGAEGRLS
Trigger: AGAGAGCCGTCCCTCTGCTCCCCTGATACAAATGCATCTCTGGTTGCTTCCTCTGCCCAATTGCTTATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418547.2
3UTR CCA 72 bp TGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCCCAGCAACATAAAACC +
Preference number: 3 (lower is better)
Translates to: CMFVLKSLKASA*TGSPEAQQHKT
Trigger: GGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp TGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTaGGAAGGAGAAGCTCCTGAAATGAACGTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: CRWQCRASVRCL*EGEAPEMNVLQ
Trigger: TTGCAGAACGTTCATTTCAGGAGCTTCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACAAACAGGCCTACGAATaGCTTCATACTTATCCGGAA +
Preference number: 3 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHKQAYE*LHTYPE
Trigger: TTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTTT...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR TCA 72 bp ACCTCCTTCCGCCCAGCTTTATCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCTCAGAGTTGTTACAAA +
Preference number: 3 (lower is better)
Translates to: TSFRPALSFLEL*LHPACAQSCYK
Trigger: TTTGTAACAACTCTGAGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGATAAAGCTGGGCGGAAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp AAAACGAACACGAGGCATGCGTTAGACAGATGCATGTaGGGGCTGCAGATTCCAGTGGTTTCCTTAAGAAAC +
Preference number: 3 (lower is better)
Translates to: KTNTRHALDRCM*GLQIPVVSLRN
Trigger: GTTTCTTAAGGAAACCACTGGAATCTGCAGCCCCCACATGCATCTGTCTAACGCATGCCTCGTGTTCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCAATGGCAAATCCACTTaGGAAAACAATTTGGCAGCG +
Preference number: 3 (lower is better)
Translates to: STYLVSGRDKPDKVHNLANGKST*ENNLAA
Trigger: CGCTGCCAAATTGTTTTCCAAAGTGGATTTGCCATT...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CAA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACCTTGAGTTCAAACTCTaGTCCCCTAAGCATAAATGT +
Preference number: 3 (lower is better)
Translates to: HPAPYGIRWETGLRIASYLEFKL*SPKHKC
Trigger: ACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAG...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCACATTTCCTAAAGTATTaGCTGGAGCTCTGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPHFLKY*LELWWL
Trigger: TAACCACCAGAGCTCCAGCAAATACTTTAGGAAATG...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR-3UTR CAA 90 bp AGGGGTAGAGGTGGGGTGCTTCCAGGTCATAGGGAGATAAGAGAAAGAGACAAACAGCTTTTTCCATCTTaGCAGCTATCTTATTTAGGA +
Preference number: 3 (lower is better)
Translates to: RGRGGVLPGHREIRERDKQLFPS*QLSYLG
Trigger: TCCTAAATAAGATAGCTGCAAAGATGGAAAAAGCTG...TTTGTCTCTTTCTCTTATCTCCCTATGACCTGGAAGCACCCCACCTCTACCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418547.2
3UTR GCA 72 bp AGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATaGATGTTTGTACTTAAATCACTGAAAGCCTCCGCT +
Preference number: 3 (lower is better)
Translates to: RFLSSQGRTITR*MFVLKSLKASA
Trigger: AGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CCA 72 bp ACAGCTGGCACTCAGACATTTACTGAATGCATACTATaGCATACCGTGCAGTGCTTAAAACGAATAAGGGAT +
Preference number: 3 (lower is better)
Translates to: TAGTQTFTECIL*HTVQCLKRIRD
Trigger: ATCCCTTATTCGTTTTAAGCACTGCACGGTATGCCATAGTATGCATTCAGTAAATGTCTGAGTGCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CCA 72 bp TTTAATGCAAACACTAGACAGTTTACAAGTCACACCTaGACACAAGCACGTGAACAGATGTACAGGGAATTC +
Preference number: 3 (lower is better)
Translates to: FNANTRQFTSHT*TQAREQMYREF
Trigger: GAATTCCCTGTACATCTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAACTGTCTAGTGTTTGCATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR-3UTR CAA 90 bp TTGCATTCTTTTGAGTCCTTGATCAGCCTTTCACTGAATACACAATTTTGTCTGAGATCAGCTATCAGTTaGTATTGCCAGGGTGAAATT +
Preference number: 3 (lower is better)
Translates to: LHSFESLISLSLNTQFCLRSAIS*YCQGEI
Trigger: AATTTCACCCTGGCAATACAAACTGATAGCTGATCT...CAGACAAAATTGTGTATTCAGTGAAAGGCTGATCAAGGACTCAAAAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR TCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GGGCGCTGGCCACCCCGGCAATGGTGCCAGGCTCTGCCACCATGCCTGATGCAGCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GRWPPRQWCQALPPCLMQLKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...CTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCAGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCATGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASAWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPQLHAR*GASHGV
Trigger: AACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTG...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGGAGCCCCGCCGCCTCTaGAGGGTCCCGCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKEPRRL*RVPPKA
Trigger: GGCTTTGGGCGGGACCCTGCAGAGGCGGCGGGGCTC...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR TCA 90 bp TGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CYLVLTGSLLAGAPSGCRWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...CCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGGCACAGGGCTACAACTaGCCACCCTCCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGAQGYN*PPSTTG
Trigger: GCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGC...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCTGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRACHRWA*VPGSRL
Trigger: AAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCA...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCGACCGGTTCGCTCCTTaGAGGGGCTCCAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPDRFAP*RGSKWV
Trigger: CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTC...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCGCACCAGCCAGAGGGTaGGGCCATCGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPAPARG*GHRFST
Trigger: TGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGC...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGGTCTCCCCTCTCGCTTaGGACAGGCCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEVSPLA*DRPMLA
Trigger: GGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGAC...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGAATCCAGGCCACCATGGCTaGGAGCAGGCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AQQLPRLVLAFYQSWLLNPGHHG*EQAEGP
Trigger: GGGGCCCTCCGCCTGCTCCCAGCCATGGTGGCCTGG...ATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTCCAGGCCACCATGGCTaGGAGCAGGCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAAPGHHG*EQAEGP
Trigger: GGGGCCCTCCGCCTGCTCCCAGCCATGGTGGCCTGG...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCCCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCGGCACGCACTGGGAATaGCCTCACAAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAGTHWE*PHKAAL
Trigger: CAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCC...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCCCACCTGCAGCTCCTTaGGGCCACTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCPPAAP*GHCQGL
Trigger: CAGCCCCTGACAGTGGCCTCAAGGAGCTGCAGGTGG...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGCCACCTGCAGCTCCTTaGGGCCACTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGPPAAP*GHCQGL
Trigger: CAGCCCCTGACAGTGGCCTCAAGGAGCTGCAGGTGG...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGCGCTGGCCACCCCGGCAATGGTGCCAGGCTCTGCCACCATGCCTGATGCAGTGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRWPPRQWCQALPPCLMQWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...CTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKQLHAR*GASHGV
Trigger: AACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTG...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCGCACAGGGCTACAACTaGCCACCCTCCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILAQGYN*PPSTTG
Trigger: GCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGC...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRATIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGNGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp CCTATTGGTTGTGGTGGTGGTGGTGTGGTCCCATGGCTCTTGTTCCAAGGACTGCCAGGCCACCATGGCTaGGAGCAGGCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PIGCGGGGVVPWLLFQGLPGHHG*EQAEGP
Trigger: GGGGCCCTCCGCCTGCTCCCAGCCATGGTGGCCTGG...CAGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCCCAGGCCACCATGGCTaGGAGCAGGCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPPGHHG*EQAEGP
Trigger: GGGGCCCTCCGCCTGCTCCCAGCCATGGTGGCCTGG...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPVRGES*GSCVCH
Trigger: GTGGCAAACACAGGAACCCCATGACTCGCCCCTCAC...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACTGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCATGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGCTGTGTTTGCCACGGTaGGCATGGCTCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLLCLPR*AWLPTH
Trigger: GTGCGTGGGGAGCCATGCTCACCGTGGCAAACACAG...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCTCACGTAGTCTGCGTTaGGACCCTCTTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRASRSLR*DPLDLL
Trigger: CAGCAGGTCAAGAGGGTCTCAACGCAGACTACGTGA...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGCGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILGPRIL*SVKLEA
Trigger: TGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCC...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPVLPEL*WFLAYW
Trigger: CCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRASSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGTGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTACCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCCCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACACCATGGCCAGGGCGCTaGCCACCCCGGCAATGGTGC +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTPWPGR*PPRQWC
Trigger: GCACCATTGCCGGGGTGGCCAGCGCCCTGGCCATGG...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGCGGCGGCGGCGGCTCTGCAGACTGCGTGTGCAACGTGGAGTATTTCACTTGGCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GGGGGSADCVCNVEYFTWPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...CCAAGTGAAATACTCCACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGGCTGGCTTTGGGAGTTaGTGGCTCAGCAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWAGFGS*WLSSSR
Trigger: TCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGC...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALLKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTGCAGTCAGTGCTCCTaGGAACACGGTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGCSQCS*EHGLTD
Trigger: GTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAGCGGCCCCGGGAAGATaGAGGTCGGGCGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLAAPGR*RSGALE
Trigger: CTCTAGCGCGCCCGACCTCCATCTTCCCGGGGCCGC...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCATCCACTACCTTCAGTaGGCCCTGGAGGTTTTGCCG +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPIHYLQ*ALEVLP
Trigger: CGGCAAAACCTCCAGGGCCCACTGAAGGTAGTGGAT...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR TCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGATGGAGACGGCACCGATaGGGGCCATGGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRWRRHR*GPWPGR
Trigger: GCGCCCTGGCCATGGCCCTCATCGGTGCCGTCTCCA...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAACCACCTGCAGCTCCTTaGGGCCACTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREPPAAP*GHCQGL
Trigger: CAGCCCCTGACAGTGGCCTCAAGGAGCTGCAGGTGG...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGACACAGGGTGGAGGGTaGGCACCTCTCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLTQGGG*APLPNT
Trigger: TGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGT...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTACACAGGGTGGAGGGTaGGCACCTCTCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALTQGGG*APLPNT
Trigger: TGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGT...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGTGTCCCGTGAGCCTCTaGCAACAGAGCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVCPVSL*QQSSPG
Trigger: TCCCGGTGAGCTCTGTTGTCAGAGGCTCACGGGACA...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCCTGCTGCTGCATGCTaGATGCTGAAGCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAPAAAC*MLKQNF
Trigger: GAAGTTCTGCTTCAGCATTCAGCATGCAGCAGCAGG...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp AGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: RPLSGAVYWQKPATMSHSPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...GGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCCCACCCCGGCAATGGTaGCAGGCTCTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELPPRQW*QALPPC
Trigger: GCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGG...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMARRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CYLVLTGSLLAGAPSGCRRMGPS*RPKRPV
Trigger: CACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCG...CCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCAACGCAGAGGCATTTCTaGAGTGCTGCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASATQRHF*SAAGPP
Trigger: AGGGGGACCTGCAGCACTGCAGAAATGCCTCTGCGT...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCTCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTGCCGTACCGGCAGCCCGCCAGGCTTCTaGAGGTGGCAGTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PQDSETHQIQGRHCCRTGSPPGF*RWQCRA
Trigger: TGCTCGACACTGCCACCTGCAGAAGCCTGGCGGGCT...GCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAGAGCCCCGCCGCCTCTaGAGGGTCCCGCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSIEPRRL*RVPPKA
Trigger: GGCTTTGGGCGGGACCCTGCAGAGGCGGCGGGGCTC...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGGGCCCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGGPWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGGCCC...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCGAGACCCTCTTGACCTaGTGCTGCATGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAETLLT*CCMLNA
Trigger: AGCATTCAGCATGCAGCAGCAGGTCAAGAGGGTCTC...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCTCCCTTCACGTAGTCTaGGTTGAGACCCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRASLHVV*VETLLT
Trigger: GGTCAAGAGGGTCTCAACGCAGACTACGTGAAGGGA...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAELAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCTGGTTCCTGGCCTATTaGTTGTGGTGGTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPWFLAY*LWWWWC
Trigger: ACACCACCACCACCACAACCAATAGGCCAGGAACCA...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGGTCCAATCCACTACCTaGAGGTTTTGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGVQSTT*RFCRSS
Trigger: AGAGCTCCGGCAAAACCTCCAGGTAGTGGATTGGAC...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCTGGCCTCTTGGTCGTaGTGGTTACATGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGLASWS*WLHGSI
Trigger: GATGGAACCATGTAACCACCACGACCAAGAGGCCAG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCTGGCCTCTTGGTCGTaGTGGTTACATGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRALASWS*WLHGSI
Trigger: GATGGAACCATGTAACCACCACGACCAAGAGGCCAG...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAATGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAATGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGGCTGGCTTTGGGAGTTaGTGGCTCAGCAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGAGFGS*WLSSSR
Trigger: TCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGC...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TGCGTGTGTGTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CVCVVLLGADRFAPCRGSEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...GGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCACACACACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCAAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASAKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGGAGTGTGGGAGGCCCTaGAAACAGGCCAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWECGRP*KQANPA
Trigger: TGCAGGATTGGCCTGTTTCCAGGGCCTCCCACACTC...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCGTCTCCCCTCTCGCTTaGGACAGGCCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELVSPLA*DRPMLA
Trigger: GGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGAC...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCGGCCCCGGGAAGATaGAGGTCGGGCGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRAAPGR*RSGALE
Trigger: CTCTAGCGCGCCCGACCTCCATCTTCCCGGGGCCGC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437787.6
ENST00000613030.4
3UTR CAA 72 bp AAGGGCACGCACTGGGAATGGCCTCACAAGGCAGCCTaGAGACGCACAGGGCTACAACTGACCACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KGTHWEWPHKAA*RRTGLQLTTLH
Trigger: GTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGAGAAACCTGCCACAATaGGCCACTCCAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWRNLPQ*ATPVCR
Trigger: CCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCT...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCCCACCTGCAGCTCCTTaGGGCCACTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGPPAAP*GHCQGL
Trigger: CAGCCCCTGACAGTGGCCTCAAGGAGCTGCAGGTGG...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACCACCTGCAGCTCCTTaGGGCCACTGTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMAPPAAP*GHCQGL
Trigger: CAGCCCCTGACAGTGGCCTCAAGGAGCTGCAGGTGG...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCACTGTGTTTGCCACGGTaGGCATGGCTCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRALCLPR*AWLPTH
Trigger: GTGCGTGGGGAGCCATGCTCACCGTGGCAAACACAG...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSQLHAR*GASHGV
Trigger: AACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTG...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGCACAGGGCTACAACTaGCCACCCTCCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREAQGYN*PPSTTG
Trigger: GCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGATAGACACATGGTaGCCAGAGCCCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVQIDTW*PEPARL
Trigger: AAGCCTGGCGGGCTCTGGTCACCATGTGTCTATCTG...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGACGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTGPRIL*SVKLEA
Trigger: TGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCC...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGCGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAERMGPS*RPKRPV
Trigger: CACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCG...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCGAAACAGGCCAATCCTaGAAGCCACCCCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILETGQS*KPPHPY
Trigger: GTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTC...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCTCTTGACCTGCTGCTaGATGCTGAATGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGLLTCC*MLNAEA
Trigger: TGCTTCAGCATTCAGCATGCAGCAGCAGGTCAAGAG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCACCCTCTTGACCTGCTaGTGCATGCTGAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRATLLTC*CMLNAE
Trigger: TTCAGCATTCAGCATGCAGCAGCAGGTCAAGAGGGT...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCAGCCTATTGGTTGTGGTaGTGGTGGTGTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASAAYWLW*WWCGPM
Trigger: CATGGGACCACACCACCACCACCACAACCAATAGGC...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILVLPEL*WFLAYW
Trigger: CCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAASWSW*LHGSIS
Trigger: AGAGATGGAACCATGTAACCACCACGACCAAGAGGC...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCTATTTGCTGGAGCTCTaGTGGTTACTGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAYLLEL*WLLASW
Trigger: CCAAGAGGCCAGTAACCACCAGAGCTCCAGCAAATA...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCTGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCAGGGGGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: GAVYWQKPATMSHSSVQGVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...CCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CYLVLTGSLLAGAPSGCRPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...CCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAAGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAALKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGCAGACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATGCCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QQTIPLSGQPMKRMGPSCLKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...GCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCVRGES*GSCVCH
Trigger: GTGGCAAACACAGGAACCCCATGACTCGCCCCTCAC...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGCTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCA +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKLKGTH*EWPHKA
Trigger: TGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAG...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAGAGTGTGGGAGGCCCTaGAAACAGGCCAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPECGRP*KQANPA
Trigger: TGCAGGATTGGCCTGTTTCCAGGGCCTCCCACACTC...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGCGCTGGCCACCCCGGCAATGGTGCCAGGCTCTGCCACCATGCCTGATGCAGTTTACAAGTCACACCTaGACACAAGCACGTGAACAG +
Preference number: 4 (lower is better)
Translates to: GRWPPRQWCQALPPCLMQFTSHT*TQAREQ
Trigger: CTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAA...CTGCATCAGGCATGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCAGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CAA 72 bp ACCATCATCCTGGGTGCTGCGTGTGTGTGGTGTTACTaGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TIILGAACVWCY*VLTGSLLAGAP
Trigger: TGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCACACACACGCAGCACCCAGGATGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCTTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPGDKRWHHCACLQLDRAFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...GGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR TCA 90 bp AGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCCCTTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRVTSGGTIVHACSWTGPFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...GGGCCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGAAACCTGCCACAATaGGCCACTCCAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCRNLPQ*ATPVCR
Trigger: CCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCT...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGGTGTTACTTGGTGCTaGCCGGTTCGCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTGVTWC*PVRSLQ
Trigger: CTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACC...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGTGGTTCTGTCCCGTaGGCCTCTGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGCGSVP*ASDNRA
Trigger: AGCTCTGTTGTCAGAGGCTCACGGGACAGAACCACA...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGCTCACAAGGCAGCCTTaGGACGCACAGGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGLTRQP*DAQGYN
Trigger: GTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAG...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCTCACAATCTGGCCAATaGGTGTGGGAGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLSQSGQ*VWEALE
Trigger: TTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGA...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: CYLVLTGSLLAGAPSGCRLQTEG*GVFQAC
Trigger: ACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAG...CCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGCTGCATGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGLHAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCATGCAG...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR GCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGCGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CCTCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTGCCGTACCGGCACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PQDSETHQIQGRHCCRTGTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...GCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRAAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCAGACCGGTTCGCTCCTTaGAGGGGCTCCAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMADRFAP*RGSKWV
Trigger: CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTC...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAGACCGGTTCGCTCCTTaGAGGGGCTCCAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLDRFAP*RGSKWV
Trigger: CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTC...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCAGGGGTGGGGTTCCTGTGTTTaGCACGGTGAGCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: GAVYWQKPATMSHSSVQGWGSCV*HGEHGS
Trigger: GGAGCCATGCTCACCGTGGCAAACACAGGAACCCCA...CCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCACGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRARMGPS*RPKRPV
Trigger: CACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCG...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCTCAACTGCAGTCAGTaGTCCTGGGAACACGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLLNCSQ*SWEHGL
Trigger: GAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAG...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGAGCCCGCCAGGCTTCTaGAGGTGGCAGTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVSPPGF*RWQCRA
Trigger: TGCTCGACACTGCCACCTGCAGAAGCCTGGCGGGCT...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACCTTGGGACAGGCCCATaGTGGCCAGTGCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: AWTGSPEAQQHKTWDGEDLGTGP*WPVQPS
Trigger: TGAAGGTTGCACTGGCCAGCATGGGCCTGTCCCAAG...GTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTCTTGGGACAGGCCCATaGTGGCCAGTGCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTLGTGP*WPVQPS
Trigger: TGAAGGTTGCACTGGCCAGCATGGGCCTGTCCCAAG...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAACAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEQGRHC*RTGHHL
Trigger: GAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437787.6
CDS-3UTR CCA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCAGGCCACCATGGCTaGGAGCAGGCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWPGHHG*EQAEGP
Trigger: GGGGCCCTCCGCCTGCTCCCAGCCATGGTGGCCTGG...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCCAAATCCACACTACTaGAACGCTGGCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILPNPHY*NAGSTR
Trigger: CCTTGTGGAGCCAGCGTTCCAGTAGTGTGGATTTGG...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCTGGTTCCTGGCCTATTaGTTGTGGTGGTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILWFLAY*LWWWWC
Trigger: ACACCACCACCACCACAACCAATAGGCCAGGAACCA...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TGCGTGTGTGTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CVCVVLLGADRFAPCRGSSSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...GGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCACACACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGTACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
ENST00000634795.1
CDS-3UTR CCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCAGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMAVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAEPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGTCCCGAGGCTGGTGCTaGCTTTCTATCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAESRGWC*LSIRAG
Trigger: GCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGA...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLSSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGGTGCTGCGTGTGTGTaGTGTTACTTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALGAACV*CYLVLT
Trigger: GGTCAGCACCAAGTAACACCACACACACGCAGCACC...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCCTAGACCCTAGCATGTaGTTCTGTCCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLLDPSM*FCPVSL
Trigger: GAGGCTCACGGGACAGAACCACATGCTAGGGTCTAG...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCGGCACGCACTGGGAATaGCCTCACAAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELGTHWE*PHKAAL
Trigger: CAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCC...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCGCACCAGCCAGAGGGTaGGGCCATCGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGAPARG*GHRFST
Trigger: TGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGC...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCACTGCGGCCATCATCTTaGTCATCCAAAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPLRPSS*SSKASA
Trigger: GGCTGATGCTTTGGATGATCAAGATGATGGCCGCAG...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGTGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CYLVLTGSLLAGAPSGCRWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...CCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGTCTCCGGTGCAGAAATaGTTGCTAAAGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGSPVQK*LLKTFL
Trigger: GAGAAAGGTCTTTAGCAATCATTTCTGCACCGGAGA...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGCTCCTTGAGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATACACAGGGTGGAGGGTaGGCACCTCTCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: QLLEATVRGCLLAETCHNTQGGG*APLPNT
Trigger: TGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGT...ATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCTCAAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAACACAGGGTGGAGGGTaGGCACCTCTCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTTQGGG*APLPNT
Trigger: TGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGT...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCAGCAGGATTCTGGCTTTaGTGCTCGTTCTTGACATCG +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASAAGFWL*CSFLTS
Trigger: CGATGTCAAGAACGAGCATCAAAGCCAGAATCCTGC...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCATGTCCCGTGAGCCTCTaGCAACAGAGCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMACPVSL*QQSSPG
Trigger: TCCCGGTGAGCTCTGTTGTCAGAGGCTCACGGGACA...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTTGTCCCGTGAGCCTCTaGCAACAGAGCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRACPVSL*QQSSPG
Trigger: TCCCGGTGAGCTCTGTTGTCAGAGGCTCACGGGACA...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTGTCCCGTGAGCCTCTaGCAACAGAGCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIACPVSL*QQSSPG
Trigger: TCCCGGTGAGCTCTGTTGTCAGAGGCTCACGGGACA...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGATGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRCHRWA*VPGSRL
Trigger: AAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCA...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCTGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGACHRWA*VPGSRL
Trigger: AAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCA...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAACAGATAGACACATGGTaGCCAGAGCCCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREQIDTW*PEPARL
Trigger: AAGCCTGGCGGGCTCTGGTCACCATGTGTCTATCTG...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGAAGGACTGTGCTGAGTaGTTCACATGGCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKKDCAE*FTWLLP
Trigger: TGGGAGGAGCCATGTGAAGCACTCAGCACAGTCCTT...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp GCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGAATACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AQQLPRLVLAFYQSWLLNTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...ATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp ACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGGTAAGGGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: TVQVCQGLKGRAGKGVVRAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...CCTTACCACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPGPRIL*SVKLEA
Trigger: TGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCC...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGGACCGGTTCGCTCCTTaGAGGGGCTCCAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKDRFAP*RGSKWV
Trigger: CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTC...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGACCGGTTCGCTCCTTaGAGGGGCTCCAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGADRFAP*RGSKWV
Trigger: CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTC...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAATGGGGTTCCTGTGTTTaGCACGGTGAGCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEWGSCV*HGEHGS
Trigger: GGAGCCATGCTCACCGTGGCAAACACAGGAACCCCA...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCACCAGGAAACCAGCTCTaGTCCAGCCCAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRAPGNQL*SSPNQA
Trigger: TGCCTGGTTTGGGCTGGAGCAGAGCTGGTTTCCTGG...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTCGCATGGGGCCATCATaGAGACCAAAGAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIARMGPS*RPKRPV
Trigger: CACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCG...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CAGCAGACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATGCGCATTTCTGCAGTGCTaGAGGTCCCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QQTIPLSGQPMKRMGPSCAFLQC*RSPFSH
Trigger: GTGGCTGAAGGGGGACCTGCAGCACTGCAGAAATGC...GCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGCATTTCTGCAGTGCTaGAGGTCCCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREAFLQC*RSPFSH
Trigger: GTGGCTGAAGGGGGACCTGCAGCACTGCAGAAATGC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACGCAGAGGCATTTCTaGAGTGCTGCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGRETQRHF*SAAGPP
Trigger: AGGGGGACCTGCAGCACTGCAGAAATGCCTCTGCGT...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CAGCAGACAATCCCGCTCAGTGGACAGCCTATGAAACGCATGGGGCCATCATGCACCGGTGGGCTTGAGTaGCAGGCTCTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QQTIPLSGQPMKRMGPSCTGGLE*QALGFV
Trigger: CACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGT...GCATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAGCCCGCCAGGCTTCTaGAGGTGGCAGTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: AYETHGAIMQTKEAREFCSPPGF*RWQCRA
Trigger: TGCTCGACACTGCCACCTGCAGAAGCCTGGCGGGCT...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: AYETHGAIMQTKEAREFCLAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGALAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTTATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALYWLWW*WCGPMA
Trigger: AGCCATGGGACCACACCACCACCACCACAACCAATA...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCCTGGCCTATTGGTTGTaGTGGTGGTGGTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELLAYWL*WWWCGP
Trigger: GGGACCACACCACCACCACCACAACCAATAGGCCAG...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGVLPEL*WFLAYW
Trigger: CCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGGTCCAATCCACTACCTaGAGGTTTTGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKVQSTT*RFCRSS
Trigger: AGAGCTCCGGCAAAACCTCCAGGTAGTGGATTGGAC...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR CCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWASWSW*LHGSIS
Trigger: AGAGATGGAACCATGTAACCACCACGACCAAGAGGC...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACCCAACAAGGAGCCGATaGCACAGAGCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RAHPGNSDQQGADGTEQHPTRSR*HRAAQQ
Trigger: CTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG...GTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAEKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCATCCCGAGGCTGGTGCTaGCTTTCTATCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAASRGWC*LSIRAG
Trigger: GCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGA...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGCTGGCTTTGGGAGTTaGTGGCTCAGCAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQAGFGS*WLSSSR
Trigger: TCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGC...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTATGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGVGSSHSADNPAQWTAYEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...ATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGGCACGCACTGGGAATaGCCTCACAAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAGTHWE*PHKAAL
Trigger: CAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTGCC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGCACCAGCCAGAGGGTaGGGCCATCGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWAPARG*GHRFST
Trigger: TGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGCACCAGCCAGAGGGTaGGGCCATCGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAAPARG*GHRFST
Trigger: TGTCGAGAACCGATGGCCCCACCCTCTGGCTGGTGC...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGTGCAGTCAGTGCTCCTaGGAACACGGTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMCSQCS*EHGLTD
Trigger: GTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCA...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCCCAGGCTTCTGCAGGTaGCAGTGTCGAGCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGPGFCR*QCRASV
Trigger: TACACTTGCTCGACACTGCCACCTGCAGAAGCCTGG...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGGGGACAGGCCCATGCTaGCCAGTGCAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVGTGPC*PVQPSD
Trigger: ATCTGAAGGTTGCACTGGCCAGCATGGGCCTGTCCC...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGTCTCCCCTCTCGCTTaGGACAGGCCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWVSPLA*DRPMLA
Trigger: GGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGAC...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGAGCCGGGTGACAAGCGGTGGCACCATTGTGCATGCCTGCAGCTGGACAGGGAATGGGGGAAGAATGTaGACAATTTACCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSRVTSGGTIVHACSWTGNGGRM*TIYQRG
Trigger: GCCTCTTTGGTAAATTGTTCACATTCTTCCCCCATT...CCCTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGCTTGTCACCCGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCGACCCTGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCDPAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCAGGGTC...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGACCCTGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALDPAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCAGGGTC...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
CDS-3UTR TCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CGTGAGCCTCTGACAACAGAGCTCACCGGGACAGAACCATATGTGGGCCAAAGGAGAAACCTGCCACAATaGGCCACTCCAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: REPLTTELTGTEPYVGQRRNLPQ*ATPVCR
Trigger: CCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCT...CCTTTGGCCCACATATGGTTCTGTCCCGGTGAGCTCTGTTGTCAGAGGCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCGGTGTTACTTGGTGCTaGCCGGTTCGCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGGVTWC*PVRSLQ
Trigger: CTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACC...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCWDGED*SETIIL
Trigger: CAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCA...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCTGGCCAGTGCATTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCG +
Preference number: 4 (lower is better)
Translates to: SVHCVSPLAWDRPMLASALYLNH*KPPLGP
Trigger: CGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAA...TGCACTGGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGTTTGATGCTCGTTCTTaGCATCGGTCACTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEFDARS*HRSLLL
Trigger: TAGCAAGAGTGACCGATGTCAAGAACGAGCATCAAA...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCGCAGGATTCTGGCTTTaGTGCTCGTTCTTGACATCG +
Preference number: 4 (lower is better)
Translates to: WCYLVLTGSLLAGAPSGCAGFWL*CSFLTS
Trigger: CGATGTCAAGAACGAGCATCAAAGCCAGAATCCTGC...GCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALSRQVG*PQSYKV
Trigger: GACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCT...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLSRQVG*PQSYKV
Trigger: GACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCT...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCTGTGGTTCTGTCCCGTaGGCCTCTGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELCGSVP*ASDNRA
Trigger: AGCTCTGTTGTCAGAGGCTCACGGGACAGAACCACA...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCATCTGACACAGCAAACTaGCTATCAGTAGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPSDTAN*LSVDRG
Trigger: GCCCCTGTCTACTGATAGTCAGTTTGCTGTGTCAGA...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGTCAGTGGACAGCCTATaGAACGCATGGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAESVDSL*NAWGHH
Trigger: ATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGA...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGTCAGTGGACAGCCTATaGAACGCATGGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGSVDSL*NAWGHH
Trigger: ATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGA...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGACTCACAAGGCAGCCTTaGGACGCACAGGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRLTRQP*DAQGYN
Trigger: GTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAG...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCACCCTTACTAACTTCCTaGAGCATGGGAAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPPLLTS*SMGSFS
Trigger: CGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGG...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACACAGATAGACACATGGTaGCCAGAGCCCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTQIDTW*PEPARL
Trigger: AAGCCTGGCGGGCTCTGGTCACCATGTGTCTATCTG...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCATCACGTAGTCTGCGTTaGGACCCTCTTGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAASRSLR*DPLDLL
Trigger: CAGCAGGTCAAGAGGGTCTCAACGCAGACTACGTGA...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGACTACCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVTTWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGT...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGACAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCACAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CCTATTGGTTGTGGTGGTGGTGGTGTGGTCCCATGGCTCTTGTTCCAAGGACTGATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PIGCGGGGVVPWLLFQGLIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...CAGTCCTTGGAACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCATCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPSLHVV*VETLLN
Trigger: ATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGA...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
CDS-3UTR GCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGTCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLSLHVV*VETLLN
Trigger: ATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGA...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACTGGGGTTCCTGTGTTTaGCACGGTGAGCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHWGSCV*HGEHGS
Trigger: GGAGCCATGCTCACCGTGGCAAACACAGGAACCCCA...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTTGGGGTTCCTGTGTTTaGCACGGTGAGCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAWGSCV*HGEHGS
Trigger: GGAGCCATGCTCACCGTGGCAAACACAGGAACCCCA...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCGCATTTCTGCAGTGCTaGAGGTCCCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLAFLQC*RSPFSH
Trigger: GTGGCTGAAGGGGGACCTGCAGCACTGCAGAAATGC...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACGCAGAGGCATTTCTaGAGTGCTGCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLTQRHF*SAAGPP
Trigger: AGGGGGACCTGCAGCACTGCAGAAATGCCTCTGCGT...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIANGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAGCTCTGGTGGTTCCTaGCCTATTGGTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAESSGGS*PIGCGG
Trigger: ACCACCACAACCAATAGGCCAGGAACCACCAGAGCT...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: RPLSGAVYWQKPATMSHSVLPEL*WFLAYW
Trigger: CCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC...GGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCATAGCCACCTCGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: TLSRWRQATHAKILHSHLASWSW*LHGSIS
Trigger: AGAGATGGAACCATGTAACCACCACGACCAAGAGGC...GAGGTGGCTATGGAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCTGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLAWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: NSQTPRAHPGNSDQQGADVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...ATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: HPAPYGIRWETGLRIASYVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAAAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCTCCCGAGGCTGGTGCTaGCTTTCTATCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLSRGWC*LSIRAG
Trigger: GCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGA...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCCCGAGGCTGGTGCTaGCTTTCTATCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIASRGWC*LSIRAG
Trigger: GCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGA...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: RPLSGAVYWQKPATMSHSSSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...GGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRASSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NSQTPRAHPGNSDQQGADGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...ATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGCTGGCTTTGGGAGTTaGTGGCTCAGCAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWAGFGS*WLSSSR
Trigger: TCGGGAGCTGCTGAGCCACCAACTCCCAAAGCCAGC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGGAGGCAGGCTGGCTTTaGGAGTTGGTGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKEAGWL*ELVAQQ
Trigger: CTGCTGAGCCACCAACTCCCAAAGCCAGCCTGCCTC...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGAAACCATCATCCTaGGTGCTGCGTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGVKPSS*VLRVCG
Trigger: ACCACACACACGCAGCACCCAGGATGATGGTTTCAC...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGTGAAACCATCATCCTaGGTGCTGCGTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTVKPSS*VLRVCG
Trigger: ACCACACACACGCAGCACCCAGGATGATGGTTTCAC...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGCCCTATGGAATCAGATaGGAAACAGGCCTACGAATT +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEPYGIR*ETGLRI
Trigger: AATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGG...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGACACCCAGCCCCCTATaGAATCAGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMTPSPL*NQMGNR
Trigger: CCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPVRGES*GSCVCH
Trigger: GTGGCAAACACAGGAACCCCATGACTCGCCCCTCAC...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCACTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPLKGTH*EWPHKA
Trigger: TGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAG...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGAGTGTGGGAGGCCCTaGAAACAGGCCAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQECGRP*KQANPA
Trigger: TGCAGGATTGGCCTGTTTCCAGGGCCTCCCACACTC...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPGSRHT*YQGGTS
Trigger: GCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACC...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGCCAGGCTTCTGCAGGTaGCAGTGTCGAGCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVPGFCR*QCRASV
Trigger: TACACTTGCTCGACACTGCCACCTGCAGAAGCCTGG...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCGGGACAGGCCCATGCTaGCCAGTGCAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLGTGPC*PVQPSD
Trigger: ATCTGAAGGTTGCACTGGCCAGCATGGGCCTGTCCC...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGTGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVWLWWW*CGPMAA
Trigger: AGCAGCCATGGGACCACACCACCACCACCACAACCA...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 72 bp GTTTTGCCGGAGCTCTGGTGGTTCCTGGCCTATTGGTaGTGGTGGTGGTGGTGTGGTCCCATGGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VLPELWWFLAYW*WWWWCGPMALV
Trigger: AACAAGAGCCATGGGACCACACCACCACCACCACAACCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CAA 72 bp CCAGCCAGAGGGTGGGGCCATCGGTTCTCGACATACTaGGTATCAGGGAGGGACAAGCCTGACAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PARGWGHRFSTY*VSGRDKPDKVH
Trigger: GTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACCGATGGCCCCACCCTCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGCACAGGTTTATGTGTaGTTTGTCCATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALAQVYV*FVHGCS
Trigger: GCTACAGCCATGGACAAATCACACATAAACCTGTGC...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCCTGCGGCCATCATCTTaGTCATCCAAAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELLRPSS*SSKASA
Trigger: GGCTGATGCTTTGGATGATCAAGATGATGGCCGCAG...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTTTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCATTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp GCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: AWTGSPEAQQHKTWDGEDIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...GTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGCTCCTTGAGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QLLEATVRGCLLAETCHNGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...ATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCTCAAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGGGGGTCACAGTCCCTTaGGTTCAAACTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVGVTVP*VQTLVP
Trigger: GGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCC...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAAGAAACCTGCCACAATaGGCCACTCCAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTRNLPQ*ATPVCR
Trigger: CCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCT...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGGTGTTACTTGGTGCTaGCCGGTTCGCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRGVTWC*PVRSLQ
Trigger: CTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGGTGTTACTTGGTGCTaGCCGGTTCGCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRGVTWC*PVRSLQ
Trigger: CTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGTTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCG +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVLYLNH*KPPLGP
Trigger: CGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAA...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGTGGCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTTTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCG +
Preference number: 4 (lower is better)
Translates to: GGSAAPEAGAGFLSELALLYLNH*KPPLGP
Trigger: CGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAA...AAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGTCTCCGGTGCAGAAATaGTTGCTAAAGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWSPVQK*LLKTFL
Trigger: GAGAAAGGTCTTTAGCAATCATTTCTGCACCGGAGA...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCTGTGTTTGCCACGGTaGGCATGGCTCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPLCLPR*AWLPTH
Trigger: GTGCGTGGGGAGCCATGCTCACCGTGGCAAACACAG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGTCTGACACAGCAAACTaGCTATCAGTAGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKSDTAN*LSVDRG
Trigger: GCCCCTGTCTACTGATAGTCAGTTTGCTGTGTCAGA...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGATCCTGCCTGTCTGGTaGCTCATATCTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKILPVW*LISAFR
Trigger: TCTGAAAGCAGATATGAGTCACCAGACAGGCAGGAT...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACTCAGTGGACAGCCTATaGAACGCATGGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RAHPGNSDQQGADGTEQHSVDSL*NAWGHH
Trigger: ATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGA...GTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVLQTEG*GVFQAC
Trigger: ACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAG...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCCAGATAGACACATGGTaGCCAGAGCCCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAQIDTW*PEPARL
Trigger: AAGCCTGGCGGGCTCTGGTCACCATGTGTCTATCTG...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGAGCTTTATCTTTCCTTaGGCTGTGACTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGSFIFP*AVTSPS
Trigger: GCTGGGTGAAGTCACAGCTCAAGGAAAGATAAAGCT...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCACCATGGCTGCTTTACTaGGGAAGTTTCTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPPWLLY*GSFFHC
Trigger: GCAGTGAAAGAAACTTCCTCAGTAAAGCAGCCATGG...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAACCTGCTGCTGCATGCTaGATGCTGAAGCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREPAAAC*MLKQNF
Trigger: GAAGTTCTGCTTCAGCATTCAGCATGCAGCAGCAGG...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGTCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMSLHVV*VETLLN
Trigger: ATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGA...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGAGCTACAAAGTCACCTaGGTTTCACTAAACCAAGCG +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWSYKVT*VSLNQA
Trigger: CGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCT...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGCCAGGAAACCAGCTCTaGTCCAGCCCAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWPGNQL*SSPNQA
Trigger: TGCCTGGTTTGGGCTGGAGCAGAGCTGGTTTCCTGG...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCCAGGAAACCAGCTCTaGTCCAGCCCAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKPGNQL*SSPNQA
Trigger: TGCCTGGTTTGGGCTGGAGCAGAGCTGGTTTCCTGG...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAEHALDR*MWGLQI
Trigger: AATCTGCAGCCCCCACATGCATCTGTCTAACGCATG...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGGAAACAGGCCAATCCTaGAAGCCACCCCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVETGQS*KPPHPY
Trigger: GTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTC...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTGAAACAGGCCAATCCTaGAAGCCACCCCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIAETGQS*KPPHPY
Trigger: GTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTC...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCTCAACTGCAGTCAGTaGTCCTGGGAACACGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVLNCSQ*SWEHGL
Trigger: GAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAG...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCTCAACTGCAGTCAGTaGTCCTGGGAACACGGTCTC +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLLNCSQ*SWEHGL
Trigger: GAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAG...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCACTCAACTGCAGTCAGTaGTCCTGGGAACACGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPLNCSQ*SWEHGL
Trigger: GAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAG...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCACCGGTGGGCTTGAGTaGCAGGCTCTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FYQSWLLNFGTKSQHAWGTGGLE*QALGFV
Trigger: CACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGT...GCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGCCAAGGTTTCTTTCCTTCAGCCCGCCAGGCTTCTaGAGGTGGCAGTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: NFLKHGKLLETRPRFLSFSPPGF*RWQCRA
Trigger: TGCTCGACACTGCCACCTGCAGAAGCCTGGCGGGCT...GAAGGAAAGAAACCTTGGCCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKNGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGANGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWNGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAAGAGACCCTCTTGACCTaGTGCTGCATGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTEETLLT*CCMLNA
Trigger: AGCATTCAGCATGCAGCAGCAGGTCAAGAGGGTCTC...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCATCCCTTCACGTAGTCTaGGTTGAGACCCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAASLHVV*VETLLT
Trigger: GGTCAAGAGGGTCTCAACGCAGACTACGTGAAGGGA...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR CCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPLAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGACTGAATGCATACTATaGCATACCGTGCAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAETECIL*HTVQCL
Trigger: TAAGCACTGCACGGTATGCCATAGTATGCATTCAGT...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHSSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CCGCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: PLGPALRKPSNIKPGMGKVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...CTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSSSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPSSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FYQSWLLNFGTKSQHAWGKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...GCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGGTGCTGCGTGTGTGTaGTGTTACTTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAGAACV*CYLVLT
Trigger: GGTCAGCACCAAGTAACACCACACACACGCAGCACC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCAGTGAAACCATCATCCTaGGTGCTGCGTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAAVKPSS*VLRVCG
Trigger: ACCACACACACGCAGCACCCAGGATGATGGTTTCAC...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCCTGAAAGCCTCCGCTTaGACCGGCTCTCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLALKASA*TGSPEA
Trigger: GGCTTCCGGAGAGCCGGTCCAAGCGGAGGCTTTCAG...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCCCTGAGGTCACGCTGTCCAGGTGGCGACAGGCCACGCATGCCAAAATCCTCCCCTATGGAATCAGATaGGAAACAGGCCTACGAATT +
Preference number: 4 (lower is better)
Translates to: TPEVTLSRWRQATHAKILPYGIR*ETGLRI
Trigger: AATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGG...GAGGATTTTGGCATGCGTGGCCTGTCGCCACCTGGACAGCGTGACCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGTGAGGGGCGAGTCATaGGGTTCCTGTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRVRGES*GSCVCH
Trigger: GTGGCAAACACAGGAACCCCATGACTCGCCCCTCAC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAGGACAGAACCATATGTaGGCCAAAGGAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPGQNHM*AKGTFQ
Trigger: CTGGAATGTTCCTTTGGCCCACATATGGTTCTGTCC...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTAGACCCTAGCATGTaGTTCTGTCCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSLDPSM*FCPVSL
Trigger: GAGGCTCACGGGACAGAACCACATGCTAGGGTCTAG...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGACAAAGTTCACAATCTaGCCAATGAGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVTKFTI*PMSVGG
Trigger: GCCTCCCACACTCATTGGCCAGATTGTGAACTTTGT...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCAGGGGGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: GAVYWQKPATMSHSSVQGGSRHT*YQGGTS
Trigger: GCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACC...CCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACGGGACAGGCCCATGCTaGCCAGTGCAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHGTGPC*PVQPSD
Trigger: ATCTGAAGGTTGCACTGGCCAGCATGGGCCTGTCCC...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GAGCAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAAGTCTCCCCTCTCGCTTaGGACAGGCCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EQTSRLTTELQSHLRFTKVSPLA*DRPMLA
Trigger: GGCCAGCATGGGCCTGTCCCAAGCGAGAGGGGAGAC...TTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAACCTTCAGTGGGCCCTaGAGGTTTTGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRTFSGP*RFCRSS
Trigger: AGAGCTCCGGCAAAACCTCCAGGGCCCACTGAAGGT...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR TCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGAGGCAGAGATTGGAGTaGTGCAACCACAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVRQRLE*CNHKPR
Trigger: CCTTGGTTTGTGGTTGCATCACTCCAATCTCTGCCT...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTGCGGCCATCATCTTaGTCATCCAAAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSLRPSS*SSKASA
Trigger: GGCTGATGCTTTGGATGATCAAGATGATGGCCGCAG...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGAGAAACCTGCCACAATaGGCCACTCCAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWRNLPQ*ATPVCR
Trigger: CCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCT...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCATGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQWDGED*SETIIL
Trigger: CAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCA...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCAGGATTCTGGCTTTaGTGCTCGTTCTTGACATCG +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAAAGFWL*CSFLTS
Trigger: CGATGTCAAGAACGAGCATCAAAGCCAGAATCCTGC...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQSRQVG*PQSYKV
Trigger: GACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCT...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCCAGCTCCACGCCAGGTaGGGGGCGAGTCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPQLHAR*GASHGV
Trigger: AACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTG...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATACTCACAAGGCAGCCTTaGGACGCACAGGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSILTRQP*DAQGYN
Trigger: GTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAG...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTCTGCAAACAGAAGGCTaGGGGGTCTTCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: AYETHGAIMQTKEAREFCLQTEG*GVFQAC
Trigger: ACATGCCTGGAAGACCCCTCAGCCTTCTGTTTGCAG...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCATCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRASFLEL*LHPACA
Trigger: AGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGA...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCTTGGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACCTGGACACAAGCACGTaGACAGATGTACAGGGAATT +
Preference number: 4 (lower is better)
Translates to: AWTGSPEAQQHKTWDGEDLDTST*TDVQGI
Trigger: AATTCCCTGTACATCTGTTCACGTGCTTGTGTCCAG...GTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGCAGGCTGAGGGAAGTTTCTTTCACTaGATCCTCCAGGTTAAAATC +
Preference number: 4 (lower is better)
Translates to: LGADRFAPCRGSKWVQAEGSFFH*ILQVKI
Trigger: GATTTTAACCTGGAGGATGCAGTGAAAGAAACTTCC...CTCAGCCTGCACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAACTACCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRTTWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGT...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCATCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TQSSSGKLRPTRSRWHRASLHVV*VETLLN
Trigger: ATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGA...TGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
CDS-3UTR GCA 90 bp CCTCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTGCCGTACCGGCTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: PQDSETHQIQGRHCCRTGSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...GCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp ATACTTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATCGGCGGCGGCGGCTCTaGAGACTGCGTGTGCAACGT +
Preference number: 4 (lower is better)
Translates to: ILIRKIPKLSRQDYHEMHRRRRL*RLRVQR
Trigger: ACGTTGCACACGCAGTCTGCAGAGCCGCCGCCGCCG...ATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAAGTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HPAPYGIRWETGLRIASYTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQLLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAACTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGRELLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CGTGAGCCTCTGACAACAGAGCTCACCGGGACAGAACCATATGTGGGCCAAAGGAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: REPLTTELTGTEPYVGQRNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...CCTTTGGCCCACATATGGTTCTGTCCCGGTGAGCTCTGTTGTCAGAGGCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: RAHPGNSDQQGADGTEQHHALDR*MWGLQI
Trigger: AATCTGCAGCCCCCACATGCATCTGTCTAACGCATG...GTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTAACGAACACGAGGCATaGGTTAGACAGATGCATGTG +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTNEHEA*VRQMHV
Trigger: CACATGCATCTGTCTAACGCATGCCTCGTGTTCGTT...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACACGCAGAGGCATTTCTaGAGTGCTGCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HPAPYGIRWETGLRIASYTQRHF*SAAGPP
Trigger: AGGGGGACCTGCAGCACTGCAGAAATGCCTCTGCGT...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGAAACAGGCCAATCCTaGAAGCCACCCCACCCTTAC +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWETGQS*KPPHPY
Trigger: GTAAGGGTGGGGTGGCTTGCAGGATTGGCCTGTTTC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTCCTTCAGAGAGAATGTaGCCCAACCAACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTPSERM*PNQHLD
Trigger: ATCAAGGTGTTGGTTGGGCCACATTCTCTCTGAAGG...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp CCTCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTGCCGTACCGGCAATTCAGTGTTGGCGTaGGTCTGGGAAAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: PQDSETHQIQGRHCCRTGNSVLA*VWENRY
Trigger: GTACCTGTTTTCCCAGACCCACGCCAACACTGAATT...GCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCTATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLYWLWW*WCGPMA
Trigger: AGCCATGGGACCACACCACCACCACCACAACCAATA...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGGCCTATTGGTTGTGGTaGTGGTGGTGTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKAYWLW*WWCGPM
Trigger: CATGGGACCACACCACCACCACCACAACCAATAGGC...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGTGGTTCCTGGCCTATTaGTTGTGGTGGTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRWFLAY*LWWWWC
Trigger: ACACCACCACCACCACAACCAATAGGCCAGGAACCA...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCAGCTCTGGTGGTTCCTaGCCTATTGGTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGSSGGS*PIGCGG
Trigger: ACCACCACAACCAATAGGCCAGGAACCACCAGAGCT...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGCTCCTTGAGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATAGCTCTGGTGGTTCCTaGCCTATTGGTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QLLEATVRGCLLAETCHNSSGGS*PIGCGG
Trigger: ACCACCACAACCAATAGGCCAGGAACCACCAGAGCT...ATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCTCAAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGTCCAATCCACTACCTaGAGGTTTTGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAVQSTT*RFCRSS
Trigger: AGAGCTCCGGCAAAACCTCCAGGTAGTGGATTGGAC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR CCA 90 bp GCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGAATGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: AQQLPRLVLAFYQSWLLNASWSW*LHGSIS
Trigger: AGAGATGGAACCATGTAACCACCACGACCAAGAGGC...ATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTATCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCTCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTTCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRASSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SWLLNFGTKSQHAWGRAETACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...CTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGTCTCAGCACGCTTaGGGCAGGGCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: AYETHGAIMQTKEAREFCKSQHA*GRAEKP
Trigger: TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAGCAGCTCCCGAGGCTaGTGCTGGCTTTCTATCAGA +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGASSSRG*CWLSIR
Trigger: TCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HPAPYGIRWETGLRIASYKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NSQTPRAHPGNSDQQGADKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...ATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGGTGCTGCGTGTGTGTaGTGTTACTTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWGAACV*CYLVLT
Trigger: GGTCAGCACCAAGTAACACCACACACACGCAGCACC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGGTGCTGCGTGTGTGTaGTGTTACTTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRGAACV*CYLVLT
Trigger: GGTCAGCACCAAGTAACACCACACACACGCAGCACC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGGTGCTGCGTGTGTGTaGTGTTACTTGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRGAACV*CYLVLT
Trigger: GGTCAGCACCAAGTAACACCACACACACGCAGCACC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAACCAGGCAGCTCCACGCCAGGTGAGGGGCGAGTCATGGGGTTCCTGTGTTTGCCCTATGGAATCAGATaGGAAACAGGCCTACGAATT +
Preference number: 4 (lower is better)
Translates to: KPGSSTPGEGRVMGFLCLPYGIR*ETGLRI
Trigger: AATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGG...CAAACACAGGAACCCCATGACTCGCCCCTCACCTGGCGTGGAGCTGCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAACACCCAGCCCCCTATaGAATCAGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPTPSPL*NQMGNR
Trigger: CCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGACACCCAGCCCCCTATaGAATCAGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRTPSPL*NQMGNR
Trigger: CCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGCTAGACCCTAGCATGTaGTTCTGTCCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWLDPSM*FCPVSL
Trigger: GAGGCTCACGGGACAGAACCACATGCTAGGGTCTAG...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGACTAGACCCTAGCATGTaGTTCTGTCCCGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRLDPSM*FCPVSL
Trigger: GAGGCTCACGGGACAGAACCACATGCTAGGGTCTAG...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGACCGGCTCTCCGGAAGCCCAGCAACATAAAACCTGGGATGGGGAAGACTGAATTAGACAGATGCATGTaGGGGCTGCAGATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPALRKPSNIKPGMGKTELDRCM*GLQIPV
Trigger: CACTGGAATCTGCAGCCCCCACATGCATCTGTCTAA...TTCAGTCTTCCCCATCCCAGGTTTTATGTTGCTGGGCTTCCGGAGAGCCGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCTCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATTGCTGCCGTACCGGCACAAAGTTCACAATCTaGCCAATGAGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PQDSETHQIQGRHCCRTGTKFTI*PMSVGG
Trigger: GCCTCCCACACTCATTGGCCAGATTGTGAACTTTGT...GCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGACCATAAAGGTAAAGTaGACAACCCCTGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKTIKVK*TTPEVT
Trigger: CGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGT...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGCAGTCAGTGCTCCTaGGAACACGGTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWCSQCS*EHGLTD
Trigger: GTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCA...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAGTGTAAGATGTCTGTaGGAAGGAGAAGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPSVRCL*EGEAPE
Trigger: TTCAGGAGCTTCTCCTTCCCACAGACATCTTACACT...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTGACCACCCTCCACCAAGTGTAAGATGTCTGTaGGAAGGAGAAGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ASQGSLETHRATTDHPPPSVRCL*EGEAPE
Trigger: TTCAGGAGCTTCTCCTTCCCACAGACATCTTACACT...TGGTGGAGGGTGGTCAGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGGACAGGCCCATGCTaGCCAGTGCAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWGTGPC*PVQPSD
Trigger: ATCTGAAGGTTGCACTGGCCAGCATGGGCCTGTCCC...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATATGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSIWLWWW*CGPMAA
Trigger: AGCAGCCATGGGACCACACCACCACCACCACAACCA...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 72 bp TCAGGATTCAGAAACCCACCAGATCCAGGGTCGTCATaGCTGCCGTACCGGCCATCACCTTTACCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGFRNPPDPGSS*LPYRPSPLPLS
Trigger: TGACAAGGGTAAAGGTGATGGCCGGTACGGCAGCAATGACGACCCTGGATCTGGTGGGTTTCTGAATCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTTTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAAFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGCAGAGGAAGCAACCAGAGATGCATTTGTATCAGGGGAGCAGAGGGACGGCTTTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQRKQPEMHLYQGSRGTAFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...AGCCGTCCCTCTGCTCCCCTGATACAAATGCATCTCTGGTTGCTTCCTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR TCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGATGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGGTAAGGTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: TVQVCQGLKGRAGKGVVRWDGED*SETIIL
Trigger: CAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCA...CCTTACCACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAWDGED*SETIIL
Trigger: CAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCA...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCTGGGATGGGGAAGACTaGAGTGAAACCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLWDGED*SETIIL
Trigger: CAGGATGATGGTTTCACTTCAGTCTTCCCCATCCCA...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAGCAGGATTCTGGCTTTaGTGCTCGTTCTTGACATCG +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTAGFWL*CSFLTS
Trigger: CGATGTCAAGAACGAGCATCAAAGCCAGAATCCTGC...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAACTGTGTTTGCCACGGTaGGCATGGCTCCCCACGCAC +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSELCLPR*AWLPTH
Trigger: GTGCGTGGGGAGCCATGCTCACCGTGGCAAACACAG...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGTGTGGTTCTGTCCCGTaGGCCTCTGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWCGSVP*ASDNRA
Trigger: AGCTCTGTTGTCAGAGGCTCACGGGACAGAACCACA...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACTCTGACACAGCAAACTaGCTATCAGTAGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHSDTAN*LSVDRG
Trigger: GCCCCTGTCTACTGATAGTCAGTTTGCTGTGTCAGA...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCATCCTGCCTGTCTGGTaGCTCATATCTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELILPVW*LISAFR
Trigger: TCTGAAAGCAGATATGAGTCACCAGACAGGCAGGAT...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAAGCACAGGGCTACAACTaGCCACCCTCCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSEAQGYN*PPSTTG
Trigger: GCCTGTGGTGGAGGGTGGTCAGTTGTAGCCCTGTGC...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGGTAAGGCCCTTACTAACTTCCTaGAGCATGGGAAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TVQVCQGLKGRAGKGVVRPLLTS*SMGSFS
Trigger: CGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGG...CCTTACCACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAGGGAGGGACAAGCCTaGCAAAGTTCACAATCTGGC +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAREGQA*QSSQSG
Trigger: GCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCTGCCACCGGTGGGCTTaGGTGCCAGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPCHRWA*VPGSRL
Trigger: AAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCA...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIASFLEL*LHPACA
Trigger: AGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGA...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGTCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQSFLEL*LHPACA
Trigger: AGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGA...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACCATGGCTGCTTTACTaGGGAAGTTTCTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAAPWLLY*GSFFHC
Trigger: GCAGTGAAAGAAACTTCCTCAGTAAAGCAGCCATGG...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGTGGGGAAGTTTCTTTCACTaGATCCTCCAGGTTAAAATC +
Preference number: 4 (lower is better)
Translates to: RSRWHRAAQQLRVQMKGWGSFFH*ILQVKI
Trigger: GATTTTAACCTGGAGGATGCAGTGAAAGAAACTTCC...CCACCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLAIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: RPLSGAVYWQKPATMSHSSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...GGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAASADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LSGAVYWQKPATMSHSSVLLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...CACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CAGCTCCTTGAGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: QLLEATVRGCLLAETCHNLLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...ATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCTCAAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCTATTGGCAGAAACCTaGCACAATGAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRALLAET*HNEPLQ
Trigger: CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAG...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAACGAACACGAGGCATaGGTTAGACAGATGCATGTG +
Preference number: 4 (lower is better)
Translates to: RAHPGNSDQQGADGTEQHNEHEA*VRQMHV
Trigger: CACATGCATCTGTCTAACGCATGCCTCGTGTTCGTT...GTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCACCGGTGGGCTTGAGTaGCAGGCTCTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLATGGLE*QALGFV
Trigger: CACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGT...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCTTGGGACAGGCCCATaGTGGCCAGTGCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPLGTGP*WPVQPS
Trigger: TGAAGGTTGCACTGGCCAGCATGGGCCTGTCCCAAG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCCTTGGGACAGGCCCATaGTGGCCAGTGCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLALGTGP*WPVQPS
Trigger: TGAAGGTTGCACTGGCCAGCATGGGCCTGTCCCAAG...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTATCTCTTGACCTGCTGCTaGATGCTGAATGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TGVGSSHSADNPAQWTAYLLTCC*MLNAEA
Trigger: TGCTTCAGCATTCAGCATGCAGCAGCAGGTCAAGAG...ATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTACCCTCTTGACCTGCTaGTGCATGCTGAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRATLLTC*CMLNAE
Trigger: TTCAGCATTCAGCATGCAGCAGCAGGTCAAGAGGGT...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCTATGAAACGCATGGGGCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTTGGTTCCTGGCCTATTaGTTGTGGTGGTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AYETHGAIMQTKEAREFCWFLAY*LWWWWC
Trigger: ACACCACCACCACCACAACCAATAGGCCAGGAACCA...ACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGCCCCATGCGTTTCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGCCTCTTGGTCGTGGTaGTTACATGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAASWSW*LHGSIS
Trigger: AGAGATGGAACCATGTAACCACCACGACCAAGAGGC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCTGGCCTCTTGGTCGTaGTGGTTACATGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKLASWS*WLHGSI
Trigger: GATGGAACCATGTAACCACCACGACCAAGAGGCCAG...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCTATTTGCTGGAGCTCTaGTGGTTACTGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPYLLEL*WLLASW
Trigger: CCAAGAGGCCAGTAACCACCAGAGCTCCAGCAAATA...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACTATTTGCTGGAGCTCTaGTGGTTACTGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHYLLEL*WLLASW
Trigger: CCAAGAGGCCAGTAACCACCAGAGCTCCAGCAAATA...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp TTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCTCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: FYQSWLLNFGTKSQHAWGSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...GCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCTGGCCACCCCGGCAATaGTGCCAGGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVWPPRQ*CQALPP
Trigger: TGGTGGCAGAGCCTGGCACCATTGCCGGGGTGGCCA...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGRETACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCACCGGGTGACAAGCGGTaGCACCATTGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPPGDKR*HHCACL
Trigger: CAGGCATGCACAATGGTGCCACCGCTTGTCACCCGG...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAGTCCAAATGAAGGGGTaGGGGGAGCCGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPVQMKG*GEPGDK
Trigger: CTTGTCACCCGGCTCCCCCCACCCCTTCATTTGGAC...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACACAGTCCAGGTCTGTCAGGGATTAAAGGGCCGAGCAGGAAAAGGGGTGGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: SHTVQVCQGLKGRAGKGVAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...CACCCCTTTTCCTGCTCGGCCCTTTAATCCCTGACAGACCTGGACTGTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGAATGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: AQQLPRLVLAFYQSWLLNAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...ATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGGTGAAACCATCATCCTaGGTGCTGCGTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKVKPSS*VLRVCG
Trigger: ACCACACACACGCAGCACCCAGGATGATGGTTTCAC...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGGACAATCCCGCTCAGTaGACAGCCTATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRDNPAQ*TAYETH
Trigger: ATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTC...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCGACAATCCCGCTCAGTaGACAGCCTATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSDNPAQ*TAYETH
Trigger: ATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTC...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCTCAAGGGCACGCACTaGGAATGGCCTCACAAGGCA +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPLKGTH*EWPHKA
Trigger: TGCCTTGTGAGGCCATTCCCAGTGCGTGCCCTTGAG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTGSRHT*YQGGTS
Trigger: GCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACC...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTCATACTGCAGTCAGTGCTCCTaGGAACACGGTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: HPAPYGIRWETGLRIASYCSQCS*EHGLTD
Trigger: GTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCA...GTATGAAGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGTGACTTACCCAAGGTaGCAGTTCAGAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRVTYPR*QFRSGR
Trigger: TCTGCCACTTCTGAACTGTCACCTTGGGTAAGTCAC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCATTCAAGATCCTTGTCTaGAAAACCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMAFKILV*KTSSSS
Trigger: GCTGGAGGAGGAGGTTTTTCAGACAAGGATCTTGAA...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000466436.5
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTCTCCGGTGCAGAAATaGTTGCTAAAGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ATVRGCLLAETCHNEPLQSPVQK*LLKTFL
Trigger: GAGAAAGGTCTTTAGCAATCATTTCTGCACCGGAGA...CTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTTTTGATGCTCGTTCTTaGCATCGGTCACTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRETQTNKEPMAQSSTAAFDARS*HRSLLL
Trigger: TAGCAAGAGTGACCGATGTCAAGAACGAGCATCAAA...AGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAGCAGACAAGTAGGCTaGCCACAGAGCTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGASRQVG*PQSYKV
Trigger: GACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGTCTGACACAGCAAACTaGCTATCAGTAGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKSDTAN*LSVDRG
Trigger: GCCCCTGTCTACTGATAGTCAGTTTGCTGTGTCAGA...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGATCCTGCCTGTCTGGTaGCTCATATCTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQILPVW*LISAFR
Trigger: TCTGAAAGCAGATATGAGTCACCAGACAGGCAGGAT...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAACTCACAAGGCAGCCTTaGGACGCACAGGGCTACAAC +
Preference number: 4 (lower is better)
Translates to: SVQGSQSLEFKLLSPKHKLTRQP*DAQGYN
Trigger: GTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAG...TTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATAGGGAGGGACAAGCCTaGCAAAGTTCACAATCTGGC +
Preference number: 4 (lower is better)
Translates to: NSQTPRAHPGNSDQQGADREGQA*QSSQSG
Trigger: GCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCT...ATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCAGCTTTATCTTTCCTTaGGCTGTGACTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLSFIFP*AVTSPS
Trigger: GCTGGGTGAAGTCACAGCTCAAGGAAAGATAAAGCT...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGCCATGGCTGCTTTACTaGGGAAGTTTCTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LSELALEFRHQVSARLGQPWLLY*GSFFHC
Trigger: GCAGTGAAAGAAACTTCCTCAGTAAAGCAGCCATGG...CTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCCTGCATGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLLHAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCATGCAG...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613030.4
CDS-3UTR GCA 90 bp ACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAGGAAGTTTCTTTCACTaGATCCTCCAGGTTAAAATC +
Preference number: 4 (lower is better)
Translates to: TQTNKEPMAQSSTAAAGPGSFFH*ILQVKI
Trigger: GATTTTAACCTGGAGGATGCAGTGAAAGAAACTTCC...TGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp TCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCTGGCATACCGTGCAGTaGTTAAAACGAATAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SELALEFRHQVSARLGQGWHTVQ*LKRIRD
Trigger: ATCCCTTATTCGTTTTAAGCACTGCACGGTATGCCA...GCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp AGAGGGACGGCTCTCTCTCCCTCTGTAAAGATCAGCTATCAGTTTGTATTGCCAATCCAGGGTCGTCATTaGTGCCGTACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: RGTALSPSVKISYQFVLPIQGRH*CRTGHH
Trigger: GTGATGGCCGGTACGGCAGCAATGACGACCCTGGAT...TGGCAATACAAACTGATAGCTGATCTTTACAGAGGGAGAGAGAGCCGTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR GCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTATCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAATGTCATCGCGGTGGCACCATTGTaGATGCCTGCAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGHSPLSSNSCPLSINVIAVAPL*MPAAGQ
Trigger: CTGTCCAGCTGCAGGCATGCACAATGGTGCCACCGC...GATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAAGGCCCCCGCATCCTGTaGTCAGTAAAGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSEGPRIL*SVKLEA
Trigger: TGCCTCCAGCTTTACTGAGCACAGGATGCGGGGGCC...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGANHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAAACCATCATCCTGGGTaGTGCGTGTGTGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRNHHPG*CVCVVL
Trigger: TAACACCACACACACGCAGCACCCAGGATGATGGTT...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCCTATGACATCGGTCACTCTTaGTACCAAAACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: TGVGSSHSADNPAQWTAYDIGHS*YQNRDT
Trigger: TGTGTCCCTGTTTTGGTAGCAAGAGTGACCGATGTC...ATAGGCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCAGGGGCTGGTGACTCATATCTaGTTTCAGAAGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GAVYWQKPATMSHSSVQGLVTHI*FQKCFL
Trigger: CAGAAAGCACTTCTGAAAGCAGATATGAGTCACCAG...CCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTCTGGTGACTCATATCTaGTTTCAGAAGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTLVTHI*FQKCFL
Trigger: CAGAAAGCACTTCTGAAAGCAGATATGAGTCACCAG...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: FYQSWLLNFGTKSQHAWGHALDR*MWGLQI
Trigger: AATCTGCAGCCCCCACATGCATCTGTCTAACGCATG...GCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGCCACCCCACCCTTACTAACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGAACGAACACGAGGCATaGGTTAGACAGATGCATGTG +
Preference number: 4 (lower is better)
Translates to: SHPTLTNFLKHGKLLETRNEHEA*VRQMHV
Trigger: CACATGCATCTGTCTAACGCATGCCTCGTGTTCGTT...CCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGGTGGGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCCACCACAGGCATGTTTaGAAAACGAACACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EFRHQVSARLGQGRETKLHHRHV*KTNTRH
Trigger: ATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTG...GAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCACCACAGGCATGTTTaGAAAACGAACACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAHHRHV*KTNTRH
Trigger: ATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTG...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TGCGTGTGTGTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCACTTCACCCAGCATGTaGTCAGAGTTGTTACAAATT +
Preference number: 4 (lower is better)
Translates to: CVCVVLLGADRFAPCRGSTSPSM*SELLQI
Trigger: AATTTGTAACAACTCTGAGCACATGCTGGGTGAAGT...GGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCACACACACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCGTGTGGTCCCATGGCTaGTTTACTGAGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TKSQHAWGRAEKPNSQTPVWSHG*FTEEVS
Trigger: AGAAACTTCCTCAGTAAAGCAGCCATGGGACCACAC...GGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAGTGTGGTCCCATGGCTaGTTTACTGAGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRVWSHG*FTEEVS
Trigger: AGAAACTTCCTCAGTAAAGCAGCCATGGGACCACAC...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCACTGCCAGTAAGGAAATaGCAATACAGGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPLPVRK*QYRSWP
Trigger: TGGCCATGACCTGTATTGCCATTTCCTTACTGGCAG...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATATATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSIYWLWW*WCGPMA
Trigger: AGCCATGGGACCACACCACCACCACCACAACCAATA...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGCCGCCTATTGGTTGTGGTaGTGGTGGTGTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: STYLVSGRDKPDKVHNLAAYWLW*WWCGPM
Trigger: CATGGGACCACACCACCACCACCACAACCAATAGGC...GGCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCAGTCGTGGTGGTTACATaGTTCCATCTCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMAVVVVT*FHLSLP
Trigger: AGGAAGAGAGAGATGGAACCATGTAACCACCACGAC...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGATATTTGCTGGAGCTCTaGTGGTTACTGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRYLLEL*WLLASW
Trigger: CCAAGAGGCCAGTAACCACCAGAGCTCCAGCAAATA...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: SQHAWGRAEKPNSQTPRAVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...AGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp CTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: LLNFGTKSQHAWGRAEKPVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...TGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR CCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTTACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GGACACAGGGTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GHRVEGEHLSPTQDKTHLTACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...GAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCACCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp TCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACGTGCATGCCTGCAGCTaGACAGGGCCCTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: SPQHRIKLISGAEMIAKDVHACS*TGPSDP
Trigger: CGGATCTGAGGGCCCTGTCCAGCTGCAGGCATGCAC...GTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GTGGAGGGTGAGCACCTCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: VEGEHLSPTQDKTHLRCRAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...TCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGAGGTGCTCACCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAAAAGCTGGAGGCAGGCTaGCTTTGGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVQGSQSLEFKLLSPKHKKLEAG*LWELVA
Trigger: AGCCACCAACTCCCAAAGCCAGCCTGCCTCCAGCTT...TTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAACACCCAGCCCCCTATaGAATCAGATGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSITPSPL*NQMGNR
Trigger: CCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGT...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCTTAGACAGATGCATGTaGGGGCTGCAGATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGALDRCM*GLQIPV
Trigger: CACTGGAATCTGCAGCCCCCACATGCATCTGTCTAA...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGGTTCTCGACATACTTaGTATCAGGGAGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRGSRHT*YQGGTS
Trigger: GCTTGTCCCTCCCTGATACCAAGTATGTCGAGAACC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAATGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVQGSQSLEFKLLSPKHKWLWWW*CGPMAA
Trigger: AGCAGCCATGGGACCACACCACCACCACCACAACCA...TTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGACCCTGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NSQTPRAHPGNSDQQGADDPAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCAGGGTC...ATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
CDS-3UTR TCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAGACCCTGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSIDPAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCAGGGTC...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR TCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCGGTGTTACTTGGTGCTaGCCGGTTCGCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPGVTWC*PVRSLQ
Trigger: CTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACC...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGCCACACCCAGCCCCCTATGGAATCAGATGGGAAACAGGCCTACGAATTGCTTTTGATGCTCGTTCTTaGCATCGGTCACTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: RPHPAPYGIRWETGLRIAFDARS*HRSLLL
Trigger: TAGCAAGAGTGACCGATGTCAAGAACGAGCATCAAA...AGCAATTCGTAGGCCTGTTTCCCATCTGATTCCATAGGGGGCTGGGTGTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATGTGGTTCTGTCCCGTaGGCCTCTGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPCGSVP*ASDNRA
Trigger: AGCTCTGTTGTCAGAGGCTCACGGGACAGAACCACA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCGAGAAGCTCCTGAAATaGACGTTCTGCAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: SQTPRAHPGNSDQQGADGEKLLK*TFCKQK
Trigger: CTTCTGTTTGCAGAACGTTCATTTCAGGAGCTTCTC...GCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCCTGGACACAAGCACGTaGACAGATGTACAGGGAATT +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGALDTST*TDVQGI
Trigger: AATTCCCTGTACATCTGTTCACGTGCTTGTGTCCAG...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCAGTGTGCAGGGGATCATTTCGCTTTACTaGGGAAGTTTCTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GAVYWQKPATMSHSSVQGIISLY*GSFFHC
Trigger: GCAGTGAAAGAAACTTCCTCAGTAAAGCGAAATGAT...CCCCTGCACACTGGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355149.8
CDS-3UTR GCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGCAGACATTTACTGAATaGATACTATGGCATACCGTG +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMQTFTE*ILWHTV
Trigger: CACGGTATGCCATAGTATGCATTCAGTAAATGTCTG...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR GCA 90 bp GAGCAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAAACTACCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EQTSRLTTELQSHLRFTKTTWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGT...TTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR GCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACTCTGCAGACTGCGTGTaGAACGTGGAGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHSADCV*NVEYFT
Trigger: AGTGAAATACTCCACGTTGCACACGCAGTCTGCAGA...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAGACATCGGTCACTCTTaGTACCAAAACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRDIGHS*YQNRDT
Trigger: TGTGTCCCTGTTTTGGTAGCAAGAGTGACCGATGTC...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CAACCAGTCCTTTCAGTCCACTGTGTCTCCCCTCTCGCTTGGGACAGGCCCATGATCTGCTTTCAGAAGTaGTTTCTGACACAGCAAACT +
Preference number: 4 (lower is better)
Translates to: QPVLSVHCVSPLAWDRPMICFQK*FLTQQT
Trigger: AGTTTGCTGTGTCAGAAAGCACTTCTGAAAGCAGAT...CATGGGCCTGTCCCAAGCGAGAGGGGAGACACAGTGGACTGAAAGGACTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGATCTGCTTTCAGAAGTaGTTTCTGACACAGCAAACT +
Preference number: 4 (lower is better)
Translates to: NKEPMAQSSTAAAGPNEGICFQK*FLTQQT
Trigger: AGTTTGCTGTGTCAGAAAGCACTTCTGAAAGCAGAT...CCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCCTGGTGACTCATATCTaGTTTCAGAAGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELLVTHI*FQKCFL
Trigger: CAGAAAGCACTTCTGAAAGCAGATATGAGTCACCAG...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCAACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGAGTTTTGTAAGATCCTaGCTGTCTGGTGACTCATAT +
Preference number: 4 (lower is better)
Translates to: PTRSRWHRAAQQLRVQMKSFVRS*LSGDSY
Trigger: ATATGAGTCACCAGACAGGCAGGATCTTACAAAACT...CTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAAAATGGTGCCAGGCTCTaGCACCATGCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSENGARL*HHARSR
Trigger: CCTGGATCTGGCATGGTGGCAGAGCCTGGCACCATT...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATGGTTGTGGTGGTGGTaGTGTGGTCCCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPWLWWW*CGPMAL
Trigger: AAGAGCCATGGGACCACACCACCACCACCACAACCA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR CCA 90 bp TTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCGTCGTGGTGGTTACATaGTTCCATCTCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FYQSWLLNFGTKSQHAWGVVVVT*FHLSLP
Trigger: AGGAAGAGAGAGATGGAACCATGTAACCACCACGAC...GCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACGTGGAGTATTTCACTTaGGGTTCCTCACATACCACG +
Preference number: 4 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHVEYFT*GSSHTT
Trigger: CGTGGTATGTGAGGAACCCCAAGTGAAATACTCCAC...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGACTGCGTGTGCAACGTaGAGTATTTCACTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKTACAT*SISLGV
Trigger: AACCCCAAGTGAAATACTCCACGTTGCACACGCAGT...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGGCTTTCTATCAGAGCTaGCTCTTGAATTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKAFYQS*LLNFGT
Trigger: GGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAATGTCATCTCCCGAGGCTGGTGCTaGCTTTCTATCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGHSPLSSNSCPLSINVISRGWC*LSIRAG
Trigger: GCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGA...GATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGGGACAGAACCATATGTaGGCCAAAGGAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWGQNHM*AKGTFQ
Trigger: CTGGAATGTTCCTTTGGCCCACATATGGTTCTGTCC...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACACAAAGTTCACAATCTaGCCAATGAGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVSAPGNTVSQTAHILRHTKFTI*PMSVGG
Trigger: GCCTCCCACACTCATTGGCCAGATTGTGAACTTTGT...GTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCCATCATGCAGACCAAAGAGGCCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGACCATAAAGGTAAAGTaGACAACCCCTGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: AIMQTKEAREFCKILPVWTIKVK*TTPEVT
Trigger: CGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGT...CCAGACAGGCAGGATCTTACAAAACTCACGGGCCTCTTTGGTCTGCATGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAAACTGGAGTTGGCTCATCCCACTCAGCAGACAATCCCGCTCAGTGGACAGCTTTACAAGTCACACCTaGACACAAGCACGTGAACAG +
Preference number: 4 (lower is better)
Translates to: RNWSWLIPLSRQSRSVDSFTSHT*TQAREQ
Trigger: CTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAA...GCTGTCCACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACGTCGTGGTGGTTACATaGTTCCATCTCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: ISAPSLSTLGAGQRNQTHVVVVT*FHLCFT
Trigger: AGTAAAGCAGAGATGGAACCATGTAACCACCACGAC...GTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466436.5
3UTR CAA 72 bp CTGCCGTACCGGCCATCACCTTTACCCTTGTCAGGTTaGTATTCTCCACCCCCTACTATGTCTTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: LPYRPSPLPLSG*YSPPPTMSSRS
Trigger: GGATCTTGAAGACATAGTAGGGGGTGGAGAATACAAACCTGACAAGGGTAAAGGTGATGGCCGGTACGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346693.8
3UTR CAA 72 bp GCTGCAGATTCCAGTGGTTTCCTTAAGAAACTGGAGTaGGCTCATCCCACTCAGCAGACAATCCCGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AADSSGFLKKLE*AHPTQQTIPLS
Trigger: ACTGAGCGGGATTGTCTGCTGAGTGGGATGAGCCAACTCCAGTTTCTTAAGGAAACCACTGGAATCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAACTGCGGCCATCATCTTaGTCATCCAAAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SVQGSQSLEFKLLSPKHKLRPSS*SSKASA
Trigger: GGCTGATGCTTTGGATGATCAAGATGATGGCCGCAG...TTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GCCACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAATGCAGTTTCTAGCTTaGCTTTTCCCTTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: ATPVCRGHSPLSSNSCPLMQFLA*LFPWLS
Trigger: ACTAAGCCAAGGGAAAAGTCAAGCTAGAAACTGCAT...TAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGGACCCTGCTGAATGCTaGAGCAGAACTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPDPAEC*SRTSSA
Trigger: AGCAGAAGAAGTTCTGCTTCAGCATTCAGCAGGGTC...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR TCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GAGCAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAATCAGTGGACAGCCTATaGAACGCATGGGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: EQTSRLTTELQSHLRFTKSVDSL*NAWGHH
Trigger: ATGATGGCCCCATGCGTTTCATAGGCTGTCCACTGA...TTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCCCTTACTAACTTCCTaGAGCATGGGAAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPPLLTS*SMGSFS
Trigger: CGAGAAGCTTCCCATGCTTCAGGAAGTTAGTAAGGG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGAGAAGCTCCTGAAATaGACGTTCTGCAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPREKLLK*TFCKQK
Trigger: CTTCTGTTTGCAGAACGTTCATTTCAGGAGCTTCTC...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAGGAATTCTGGAATTTTaGGATCAGTCCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LALEFRHQVSARLGQGREGILEF*DQSPFL
Trigger: AAGAAATGGGGACTGATCTCAAAATTCCAGAATTCC...TTCTCTGCCCTGCCCCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCAGGAATTCTGGAATTTTaGGATCAGTCCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: QSSSGKLRPTRSRWHRAAGILEF*DQSPFL
Trigger: AAGAAATGGGGACTGATCTCAAAATTCCAGAATTCC...TGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCGGAAGTTTCTTTCACTaGATCCTCCAGGTTAAAATC +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELGSFFH*ILQVKI
Trigger: GATTTTAACCTGGAGGATGCAGTGAAAGAAACTTCC...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000466436.5
ENST00000613030.4
CDS-3UTR GCA 90 bp CCATCTTTGCAGCTATCTTATTTAGGAGTAGAATGGGAGGCACGTTTGCCTGATCAGGGTCGTCATTGCTaGCGTACCGGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: PSLQLSYLGVEWEARLPDQGRHC*RTGHHL
Trigger: AAGGTGATGGCCGGTACGGCAGCAATGACGACCCTG...ATCAGGCAAACGTGCCTCCCATTCTACTCCTAAATAAGATAGCTGCAAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR GCA 90 bp AACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGCCAAGGTTTCTTTCCTTCTCCCTTCACGTAGTCTaGGTTGAGACCCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: NFLKHGKLLETRPRFLSFSLHVV*VETLLN
Trigger: ATTCAGCAGGGTCTCAACGCAGACTACGTGAAGGGA...GAAGGAAAGAAACCTTGGCCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
CDS-3UTR GCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCACCATTGTGCATGCCTaGAGCTGGACAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVTIVHA*SWTGPS
Trigger: TGAGGGCCCTGTCCAGCTGCAGGCATGCACAATGGT...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GTGGTGTTACTTGGTGCTGACCGGTTCGCTCCTTGCAGGGGCTCCAAGTGGGTGAGGACTATCACGAGATaGATGTTTGTACTTAAATCA +
Preference number: 4 (lower is better)
Translates to: VVLLGADRFAPCRGSKWVRTITR*MFVLKS
Trigger: TGATTTAAGTACAAACATGCATCTCGTGATAGTCCT...CACCCACTTGGAGCCCCTGCAAGGAGCGAACCGGTCAGCACCAAGTAACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ACAAGGAGCCGATGGCACAGAGCAGCACAGCAGCTGCGGGTCCAAATGAAGGGGAGGACTATCACGAGATaGATGTTTGTACTTAAATCA +
Preference number: 4 (lower is better)
Translates to: TRSRWHRAAQQLRVQMKGRTITR*MFVLKS
Trigger: TGATTTAAGTACAAACATGCATCTCGTGATAGTCCT...CCCCTTCATTTGGACCCGCAGCTGCTGTGCTGCTCTGTGCCATCGGCTCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAAACAGGCCTACGAATTaGTTCATACTTATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTNRPTN*FILIRK
Trigger: CTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTT...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAGACATCGGTCACTCTTaGTACCAAAACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: PVCRGHSPLSSNSCPLSIDIGHS*YQNRDT
Trigger: TGTGTCCCTGTTTTGGTAGCAAGAGTGACCGATGTC...TATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCATGCGTTAGACAGATaGATGTGGGGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPHALDR*MWGLQI
Trigger: AATCTGCAGCCCCCACATGCATCTGTCTAACGCATG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp ATACTTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATGCATTTCTGCAGTGCTaGAGGTCCCCCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ILIRKIPKLSRQDYHEMHAFLQC*RSPFSH
Trigger: GTGGCTGAAGGGGGACCTGCAGCACTGCAGAAATGC...ATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACACCGGTGGGCTTGAGTaGCAGGCTCTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPQHRIKLISGAEMIAKDTGGLE*QALGFV
Trigger: CACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGT...GTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACAGAGCAGCACACTTCACCCAGCATGTaGTCAGAGTTGTTACAAATT +
Preference number: 4 (lower is better)
Translates to: RAHPGNSDQQGADGTEQHTSPSM*SELLQI
Trigger: AATTTGTAACAACTCTGAGCACATGCTGGGTGAAGT...GTGCTGCTCTGTGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGTGTGGTCCCATGGCTaGTTTACTGAGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWVWSHG*FTEEVS
Trigger: AGAAACTTCCTCAGTAAAGCAGCCATGGGACCACAC...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAGCTCACATGGTTCCATCTCTaGTTTACTGAGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSTLGAGQRNQTHKHPELTWFHL*FTEEVS
Trigger: AGAAACTTCCTCAGTAAAGCAGAGATGGAACCATGT...GAGCTCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466436.5
CDS-3UTR CCA 90 bp CAACACAGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACCTTTCTCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QHRIKLISGAEMIAKDLSLAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...AGAAAGGTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCTGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACCTTTCTCATGTCCTCGCTGGACCAGGGTaGCCAAGGAGAAAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RIKLISGAEMIAKDLSHVLAGPG*PRRKRG
Trigger: GCCTCGCTTTCTCCTTGGCCACCCTGGTCCAGCGAG...GACATGAGAAAGGTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPYWLWW*WCGPMA
Trigger: AGCCATGGGACCACACCACCACCACCACAACCAATA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GAGCAGAGGGACGGCTCTCTCTCCCTCTGTAAAGATCAGCTATCAGTTTGTATTTATTGGTTGTGGTGGTaGTGGTGTGGTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: EQRDGSLSLCKDQLSVCIYWLWW*WCGPMA
Trigger: AGCCATGGGACCACACCACCACCACCACAACCAATA...AATACAAACTGATAGCTGATCTTTACAGAGGGAGAGAGAGCCGTCCCTCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR CCA 90 bp ATACTTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATCTGGCCTATTGGTTGTaGTGGTGGTGGTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ILIRKIPKLSRQDYHEMHLAYWL*WWWCGP
Trigger: GGGACCACACCACCACCACCACAACCAATAGGCCAG...ATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGAGGGACGGCTCTCTCTCCCTCTGTAAAGATCAGCTATCAGTTTGTATTGCCAAGCTCTGGTGGTTCCTaGCCTATTGGTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGTALSPSVKISYQFVLPSSGGS*PIGCGG
Trigger: ACCACCACAACCAATAGGCCAGGAACCACCAGAGCT...TGGCAATACAAACTGATAGCTGATCTTTACAGAGGGAGAGAGAGCCGTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR CCA 90 bp TGTAGGCAAATTGTGAGGGAGGCGTGCAGCTTTTTCCATCTTTGCAGCTATCTTGTTTTGCCGGAGCTCTaGTGGTTCCTGGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: CRQIVREACSFFHLCSYLVLPEL*WFLAYW
Trigger: CCAATAGGCCAGGAACCACCAGAGCTCCGGCAAAAC...AAGATAGCTGCAAAGATGGAAAAAGCTGCACGCCTCCCTCACAATTTGCCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCACTGGCCTCTTGGTCGTaGTGGTTACATGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPLASWS*WLHGSI
Trigger: GATGGAACCATGTAACCACCACGACCAAGAGGCCAG...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPSSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp CAGACAAGTAGGCTGACCACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCATCCTCCTCCAGCAATTaGTTTCCTGCGGCCATCATC +
Preference number: 4 (lower is better)
Translates to: QTSRLTTELQSHLRFTKPSSSSN*FPAAII
Trigger: GATGATGGCCGCAGGAAACCAATTGCTGGAGGAGGA...TGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGTGGTCAGCCTACTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp AGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATGTTTGTACTTAAAGGCTTTGGGAGTTGGTaGCTCAGCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RFLSSQGRTITRCMFVLKGFGSW*LSSSRG
Trigger: GCCTCGGGAGCTGCTGAGCCACCAACTCCCAAAGCC...TTTAAGTACAAACATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCTTTCTATCAGAGCTGGCTCTTGAATTTCGGCACCAAGTCTCAGCACGCTTGGGGACAGAACCATATGTaGGCCAAAGGAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: AFYQSWLLNFGTKSQHAWGQNHM*AKGTFQ
Trigger: CTGGAATGTTCCTTTGGCCCACATATGGTTCTGTCC...CCAAGCGTGCTGAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGATAGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AACTTCCTGAAGCATGGGAAGCTTCTCGAGACCAGGCCAAGGTTTCTTTCCTTCGACAATCCCGCTCAGTaGACAGCCTATGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: NFLKHGKLLETRPRFLSFDNPAQ*TAYETH
Trigger: ATGCGTTTCATAGGCTGTCCACTGAGCGGGATTGTC...GAAGGAAAGAAACCTTGGCCTGGTCTCGAGAAGCTTCCCATGCTTCAGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAACCAGGCTTCTGCAGGTaGCAGTGTCGAGCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSEPGFCR*QCRASV
Trigger: TACACTTGCTCGACACTGCCACCTGCAGAAGCCTGG...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp GCTCAGCAGCTCCCGAGGCTGGTGCTGGCTTTCTATCAGAGCTGGCTCTTGAATATGTACAGGGAATTCTaGAATTTTGAGATCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AQQLPRLVLAFYQSWLLNMYREF*NFEISP
Trigger: GGGACTGATCTCAAAATTCCAGAATTCCCTGTACAT...ATTCAAGAGCCAGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCTGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp AGGCCACTGTCAGGGGCTGTCTATTGGCAGAAACCTGCCACAATGAGCCACTCCATGTACAGGGAATTCTaGAATTTTGAGATCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPLSGAVYWQKPATMSHSMYREF*NFEISP
Trigger: GGGACTGATCTCAAAATTCCAGAATTCCCTGTACAT...GGAGTGGCTCATTGTGGCAGGTTTCTGCCAATAGACAGCCCCTGACAGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CACTCCAGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGTTTACAAGTCACACCTaGACACAAGCACGTGAACAG +
Preference number: 4 (lower is better)
Translates to: HSSVQGSQSLEFKLLSPKFTSHT*TQAREQ
Trigger: CTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAA...CTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACTGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCAAACTCACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCTTTACAAGTCACACCTaGACACAAGCACGTGAACAG +
Preference number: 4 (lower is better)
Translates to: PNSQTPRAHPGNSDQQGAFTSHT*TQAREQ
Trigger: CTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAA...GGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTGAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
3UTR CAA 72 bp AGTGTGCAGGGGTCACAGTCCCTTGAGTTCAAACTCTaGTCCCCTAAGCATAAATGTCATCAGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SVQGSQSLEFKL*SPKHKCHQASA
Trigger: TGCTGAGGCCTGATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCTGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp CACAAACACCCAGAGCTCATCCGGGAAACTCAGACCAACAAGGAGCCGATGGCACACTCAGACATTTACTaGATGCATACTATGGCATAC +
Preference number: 4 (lower is better)
Translates to: HKHPELIRETQTNKEPMAHSDIY*MHTMAY
Trigger: GTATGCCATAGTATGCATTCAGTAAATGTCTGAGTG...TGCCATCGGCTCCTTGTTGGTCTGAGTTTCCCGGATGAGCTCTGGGTGTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346693.8
CDS-3UTR TCA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGATCAGAGCTGGCTCTTaGATTTCGGCACCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWIRAGS*ISAPSL
Trigger: GAGACTTGGTGCCGAAATTCAAGAGCCAGCTCTGAT...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAATGTCATCTGGGGAAGACTGAAGTaGAACCATCATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGHSPLSSNSCPLSINVIWGRLK*NHHPGC
Trigger: GCACCCAGGATGATGGTTTCACTTCAGTCTTCCCCA...GATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGTTGTACTTAAATCACTaGAAGCCTCCGCTTGGACCG +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPLYLNH*KPPLGP
Trigger: CGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAA...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346693.8
ENST00000355149.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACTCACAATCTGGCCAATaGGTGTGGGAGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPQHRIKLISGAEMIAKDSQSGQ*VWEALE
Trigger: TTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGA...GTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp ATACTTATCCGGAAGATTCCTAAGCTCTCAAGGCAGGACTATCACGAGATGCATTCACAATCTGGCCAATaGGTGTGGGAGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILIRKIPKLSRQDYHEMHSQSGQ*VWEALE
Trigger: TTCCAGGGCCTCCCACACTCATTGGCCAGATTGTGA...ATGCATCTCGTGATAGTCCTGCCTTGAGAGCTTAGGAATCTTCCGGATAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp AGGGGTCACAGTCCCTTGAGTTCAAACTCTTGTCCCCTAAGCATAAATGTCATCAGGGAGGGACAAGCCTaGCAAAGTTCACAATCTGGC +
Preference number: 4 (lower is better)
Translates to: RGHSPLSSNSCPLSINVIREGQA*QSSQSG
Trigger: GCCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCT...GATGACATTTATGCTTAGGGGACAAGAGTTTGAACTCAAGGGACTGTGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp TCTCGACATACTTGGTATCAGGGAGGGACAAGCCTGACAAAGTTCACAATCTGGTCTTTCCTTGAGCTGTaGCTTCACCCAGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: SRHTWYQGGTSLTKFTIWSFLEL*LHPACA
Trigger: AGCACATGCTGGGTGAAGTCACAGCTCAAGGAAAGA...CCAGATTGTGAACTTTGTCAGGCTTGTCCCTCCCTGATACCAAGTATGTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR TCA 90 bp GGGCAGAGGAAGCAACCAGAGATGCATTTGTATCAGGGGAGCAGAGGGACGGCTTTTGTATTGCCAGGGTaGAATTCACAGAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: GQRKQPEMHLYQGSRGTAFVLPG*NSQNCF
Trigger: AAAACAGTTCTGTGAATTTCACCCTGGCAATACAAA...AGCCGTCCCTCTGCTCCCCTGATACAAATGCATCTCTGGTTGCTTCCTCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR GCA 90 bp CCATCTTTGCAGCTATCTTATTTAGGAGTAGAATGGGAGGCACGTTTGCCTGATACTACCTGGAGGTTTTaGCGGAGCTCTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSLQLSYLGVEWEARLPDTTWRF*RSSGGS
Trigger: GGAACCACCAGAGCTCCGGCAAAACCTCCAGGTAGT...ATCAGGCAAACGTGCCTCCCATTCTACTCCTAAATAAGATAGCTGCAAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR GCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp TCTCCCCAACACAGGATAAAACTCATCTCCGGTGCAGAAATGATTGCTAAAGACAGCTCCCGAGGCTGGTaGTGGCTTTCTATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPQHRIKLISGAEMIAKDSSRGW*WLSIRA
Trigger: AGCTCTGATAGAAAGCCAGCACCAGCCTCGGGAGCT...GTCTTTAGCAATCATTTCTGCACCGGAGATGAGTTTTATCCTGTGTTGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp CACGCACTGGGAATGGCCTCACAAGGCAGCCTTGAGACGCACAGGGCTACAACTAGGACTATCACGAGATaGATGTTTGTACTTAAATCA +
Preference number: 4 (lower is better)
Translates to: HALGMASQGSLETHRATTRTITR*MFVLKS
Trigger: TGATTTAAGTACAAACATGCATCTCGTGATAGTCCT...AGTTGTAGCCCTGTGCGTCTCAAGGCTGCCTTGTGAGGCCATTCCCAGTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AAGTCTCAGCACGCTTGGGGCAGGGCAGAGAAACCAAACTCACAAACACCCAGAAACAGGCCTACGAATTaGTTCATACTTATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KSQHAWGRAEKPNSQTPRNRPTN*FILIRK
Trigger: CTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTT...TCTGGGTGTTTGTGAGTTTGGTTTCTCTGCCCTGCCCCAAGCGTGCTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGGCTTCTGCAGGTGGCAGTGTCGAGCAAGTGTAAGATGTCTGTGGGAAGGAGAAACAGGCCTACGAATTaGTTCATACTTATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLQVAVSSKCKMSVGRRNRPTN*FILIRK
Trigger: CTTCCGGATAAGTATGAAGCAATTCGTAGGCCTGTT...TCTCCTTCCCACAGACATCTTACACTTGCTCGACACTGCCACCTGCAGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp GTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACAAGTTTTGTAAGATCCTaGCTGTCTGGTGACTCATAT +
Preference number: 4 (lower is better)
Translates to: VSLNCSQCSWEHGLTDSTSFVRS*LSGDSY
Trigger: ATATGAGTCACCAGACAGGCAGGATCTTACAAAACT...TGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR GCA 90 bp AGATGCATGTTTGTACTTAAATCACTGAAAGCCTCCGCTTGGACCGGCTCTCCGCACCACAGGCATGTTTaGAAAACGAACACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RCMFVLKSLKASAWTGSPHHRHV*KTNTRH
Trigger: ATGCCTCGTGTTCGTTTTGCAAACATGCCTGTGGTG...CGGAGAGCCGGTCCAAGCGGAGGCTTTCAGTGATTTAAGTACAAACATGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCGCCTATTGGTTGTGGTaGTGGTGGTGTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVAYWLW*WWCGPM
Trigger: CATGGGACCACACCACCACCACCACAACCAATAGGC...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp CCCGTGAGTTTTGTAAGATCCTGCCTGTCTGGTGACTCATATCTGCTTTCAGAAAGCTCTGGTGGTTCCTaGCCTATTGGTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PVSFVRSCLSGDSYLLSESSGGS*PIGCGG
Trigger: ACCACCACAACCAATAGGCCAGGAACCACCAGAGCT...TTCTGAAAGCAGATATGAGTCACCAGACAGGCAGGATCTTACAAAACTCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000437787.6
ENST00000613030.4
CDS-3UTR CCA 90 bp ACAGAGCTACAAAGTCACCTGCGTTTCACTAAACCAAGCGAATGTCTCTTTCCCCTGGCCTCTTGGTCGTaGTGGTTACATGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: TELQSHLRFTKPSECLFPLASWS*WLHGSI
Trigger: GATGGAACCATGTAACCACCACGACCAAGAGGCCAG...GGGAAAGAGACATTCGCTTGGTTTAGTGAAACGCAGGTGACTTTGTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346693.8
ENST00000370377.8
ENST00000613030.4
CDS-3UTR CCA 90 bp TTACATAAGCAATTGGGCAGAGGAAGCAACCAGAGATGCATTTGTATCAGGGGAAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LHKQLGRGSNQRCICIRGSSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...TCCCCTGATACAAATGCATCTCTGGTTGCTTCCTCTGCCCAATTGCTTATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418547.2
CDS-3UTR CCA 90 bp ATTAAGCTGATAGAGATTGGCCACTTTCAACCAGTCCTTTCAGTCCACTGTGTCAGCTCTGGTGGTTACTaGCCTCTTGGTCGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IKLIEIGHFQPVLSVHCVSSGGY*PLGRGG
Trigger: ACCACCACGACCAAGAGGCCAGTAACCACCAGAGCT...GACACAGTGGACTGAAAGGACTGGTTGAAAGTGGCCAATCTCTATCAGCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346693.8