Pregenerated sensors for CD99 (Homo sapiens)
Ensembl gene IDs: ENSG00000002586Ensembl transcript IDs: ENST00000381184.6, ENST00000381187.8, ENST00000381192.10, ENST00000449611.6, ENST00000482293.6, ENST00000482405.7, ENST00000497752.7, ENST00000611428.5, ENST00000623253.4, ENST00000624481.4, ENST00000645950.1, ENST00000646103.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGGAACTAGGGTGGTTGGGGTTTGGATTTGGCATCGGTTTGGGTaGGTTCGGTGGTCGTGGGTCGTCATTTTCTCCATCAACAACAGC | + |
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Preference number: 5 (lower is better) Translates to: GGTRVVGVWIWHRFG*VRWSWVVIFSINNS Trigger: GCTGTTGTTGATGGAGAAAATGACGACCCACGACCACCGAACCCACCCAAACCGATGCCAAATCCAAACCCCAACCACCCTAGTTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000381184.6 ENST00000381187.8 ENST00000381192.10 ENST00000449611.6 ENST00000482293.6 ENST00000482405.7 ENST00000497752.7 ENST00000611428.5 ENST00000623253.4 ENST00000624481.4 ENST00000645950.1 |
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| CDS GCA 90 bp | TGGACACATACAGGCGGACCTCCTTCACTGCACTTTGTCTTAAGGTaGTTTGCAAATACTGTGTGTTTTACAAACGGAAGGCCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WTHTGGPPSLHFVLR*FANTVCFTNGRPAA Trigger: TGCTGCAGGCCTTCCGTTTGTAAAACACACAGTATTTGCAAAGCACCTTAAGACAAAGTGCAGTGAAGGAGGTCCGCCTGTATGTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS GCA 90 bp | ATTTATATGTACTGGGAAGCCAAAAATTGCTATGACTCCTGTTATTaGGGTGGTCTAGAACCTAGCTGGAAATGGCTGGGATATGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IYMYWEAKNCYDSCY*GGLEPSWKWLGYAC Trigger: ACAGGCATATCCCAGCCATTTCCAGCTAGGTTCTAGACCACCGCAATAACAGGAGTCATAGCAATTTTTGGCTTCCCAGTACATATAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS GCA 90 bp | GTTGAGAGTAAACATAACATTTATATGTACTGGGAAGCCAAAAATTaGTATGACTCCTGTTATTGCGGTGGTCTAGAACCTAGCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: VESKHNIYMYWEAKN*YDSCYCGGLEPSWK Trigger: TTTCCAGCTAGGTTCTAGACCACCGCAATAACAGGAGTCATAGCAATTTTTGGCTTCCCAGTACATATAAATGTTATGTTTACTCTCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS CCA 90 bp | AAAAATTGCTATGACTCCTGTTATTGCGGTGGTCTAGAACCTAGCTaGAAATGGCTGGGATATGCCTGTATATACTATGTTAACATAAAA | + |
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Preference number: 5 (lower is better) Translates to: KNCYDSCYCGGLEPS*KWLGYACIYYVNIK Trigger: TTTTATGTTAACATAGTATATACAGGCATATCCCAGCCATTTCCAGCTAGGTTCTAGACCACCGCAATAACAGGAGTCATAGCAATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS CCA 72 bp | GCTACCGGAGGAACTAGGGTGGTTGGGGTTTGGATTTaGCATCGGTTTGGGTGGGTTCGGTGGTCGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ATGGTRVVGVWI*HRFGWVRWSWV Trigger: GACCCACGACCACCGAACCCACCCAAACCGATGCCAAATCCAAACCCCAACCACCCTAGTTCCTCCGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000381184.6 ENST00000381187.8 ENST00000381192.10 ENST00000449611.6 ENST00000482293.6 ENST00000482405.7 ENST00000497752.7 ENST00000611428.5 ENST00000623253.4 ENST00000624481.4 ENST00000645950.1 |
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| CDS CCA 72 bp | GGGGTTTGGATTTGGCATCGGTTTGGGTGGGTTCGGTaGTCGTGGGTCGTCATTTTCTCCATCAACAACAGC | + |
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Preference number: 6 (lower is better) Translates to: GVWIWHRFGWVR*SWVVIFSINNS Trigger: GCTGTTGTTGATGGAGAAAATGACGACCCACGACCACCGAACCCACCCAAACCGATGCCAAATCCAAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000381184.6 ENST00000381187.8 ENST00000381192.10 ENST00000449611.6 ENST00000482293.6 ENST00000482405.7 ENST00000497752.7 ENST00000611428.5 ENST00000623253.4 ENST00000624481.4 ENST00000645950.1 |
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| CDS CCA 72 bp | AGGTCAGCATCTGAAAAGCTACCGGAGGAACTAGGGTaGTTGGGGTTTGGATTTGGCATCGGTTTGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSASEKLPEELG*LGFGFGIGLGG Trigger: CCCACCCAAACCGATGCCAAATCCAAACCCCAACCACCCTAGTTCCTCCGGTAGCTTTTCAGATGCTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000381184.6 ENST00000381187.8 ENST00000381192.10 ENST00000449611.6 ENST00000482293.6 ENST00000482405.7 ENST00000497752.7 ENST00000611428.5 ENST00000623253.4 ENST00000624481.4 ENST00000645950.1 |
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| CDS CAA 72 bp | TCAGCATCTGAAAAGCTACCGGAGGAACTAGGGTGGTaGGGGTTTGGATTTGGCATCGGTTTGGGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SASEKLPEELGW*GFGFGIGLGGF Trigger: GAACCCACCCAAACCGATGCCAAATCCAAACCCCAACCACCCTAGTTCCTCCGGTAGCTTTTCAGATGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000381184.6 ENST00000381187.8 ENST00000381192.10 ENST00000449611.6 ENST00000482293.6 ENST00000482405.7 ENST00000497752.7 ENST00000611428.5 ENST00000623253.4 ENST00000624481.4 ENST00000645950.1 |
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| CDS GCA 72 bp | CTTTGCAAATACTGTGTGTTTTACAAACGGAAGGCCTaGAGCAACCCTGTGGCAAGCCAGACTCTCGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LCKYCVFYKRKA*SNPVASQTLGI Trigger: GATGCCGAGAGTCTGGCTTGCCACAGGGTTGCTGCAGGCCTTCCGTTTGTAAAACACACAGTATTTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS GCA 72 bp | TACTGGGAAGCCAAAAATTGCTATGACTCCTGTTATTaGGGTGGTCTAGAACCTAGCTGGAAATGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: YWEAKNCYDSCY*GGLEPSWKWLG Trigger: TCCCAGCCATTTCCAGCTAGGTTCTAGACCACCGCAATAACAGGAGTCATAGCAATTTTTGGCTTCCCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS CCA 72 bp | TCCTGTTATTGCGGTGGTCTAGAACCTAGCTGGAAATaGCTGGGATATGCCTGTATATACTATGTTAACATA | + |
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Preference number: 6 (lower is better) Translates to: SCYCGGLEPSWK*LGYACIYYVNI Trigger: TATGTTAACATAGTATATACAGGCATATCCCAGCCATTTCCAGCTAGGTTCTAGACCACCGCAATAACAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS GCA 72 bp | AAACATAACATTTATATGTACTGGGAAGCCAAAAATTaGTATGACTCCTGTTATTGCGGTGGTCTAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: KHNIYMYWEAKN*YDSCYCGGLEP Trigger: AGGTTCTAGACCACCGCAATAACAGGAGTCATAGCAATTTTTGGCTTCCCAGTACATATAAATGTTATGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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| CDS CCA 72 bp | ACTACAGTTGAGAGTAAACATAACATTTATATGTACTaGGAAGCCAAAAATTGCTATGACTCCTGTTATTGC | + |
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Preference number: 6 (lower is better) Translates to: TTVESKHNIYMY*EAKNCYDSCYC Trigger: GCAATAACAGGAGTCATAGCAATTTTTGGCTTCCCAGTACATATAAATGTTATGTTTACTCTCAACTGTAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646103.1 |
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