RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD96 (Homo sapiens)

Ensembl gene IDs: ENSG00000153283

Ensembl transcript IDs: ENST00000283285.10, ENST00000352690.9, ENST00000438817.6, ENST00000460744.1, ENST00000465428.1, ENST00000488054.1, ENST00000494798.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTCACTCTTGGTTAAGCTTCAGGCGTTTGGAGATGGAAGAGGGTaGGTTGCTGGGAAAACAGGTCACTCACTTCTGACTTCCATTTCA +
Preference number: 1 (lower is better)
Translates to: LSLLVKLQAFGDGRG*VAGKTGHSLLTSIS
Trigger: TGAAATGGAAGTCAGAAGTGAGTGACCTGTTTTCCCAGCAACTCACCCTCTTCCATCTCCAAACGCCTGAAGCTTAACCAAGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp CATAAAGATGTGAATAGTAGGAGGCAAGAACACTGGGGCTCATCTTaGAGGCTGGCCACCACAAGAGTTAAGCACCTACCTAAGATTCTG +
Preference number: 1 (lower is better)
Translates to: HKDVNSRRQEHWGSS*RLATTRVKHLPKIL
Trigger: CAGAATCTTAGGTAGGTGCTTAACTCTTGTGGTGGCCAGCCTCCAAGATGAGCCCCAGTGTTCTTGCCTCCTACTATTCACATCTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR TCA 90 bp TCTCTTGAGGTCTTGGTCAAAAGATCAACTGAAGTTGCAATTATCTaGAGACTTGACTGGAGGCTGGAGGATCTGCTTCCAAGATGGCTC +
Preference number: 1 (lower is better)
Translates to: SLEVLVKRSTEVAII*RLDWRLEDLLPRWL
Trigger: GAGCCATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTCAGTTGATCTTTTGACCAAGACCTCAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp TTGGTGTCTTCATGGCATGGGAATGGGCTTTTCCCAGTGTCAGTATaGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGTATTTTGTGAC +
Preference number: 1 (lower is better)
Translates to: LVSSWHGNGLFPVSV*SKRDQRRSHSVFCD
Trigger: GTCACAAAATACACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCCCATTCCCATGCCATGAAGACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp CTATCTGTCAACAACATCTGTTTTTCCCTCCTGGAGCAGGGAGTGTaGGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTC +
Preference number: 1 (lower is better)
Translates to: LSVNNICFSLLEQGV*EGFKRQGGLVIYSF
Trigger: GAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCCCACACTCCCTGCTCCAGGAGGGAAAAACAGATGTTGTTGACAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp CTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGCTCGATaGTTCTCAACTTTGGCTGAACATGTGAATCATTTGAGAGTGTTG +
Preference number: 1 (lower is better)
Translates to: LPKILSHEKELPQAR*FSTLAEHVNHLRVL
Trigger: CAACACTCTCAAATGATTCACATGTTCAGCCAAAGTTGAGAACCATCGAGCCTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp GGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATaGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTGGGAAA +
Preference number: 1 (lower is better)
Translates to: GWSLEKHSLVFFDMK*FNGERVSLLWSFGK
Trigger: TTTCCCAAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
3UTR CCA 90 bp AAAGTAGGGTTGGGCTTAGGCTGCCTGTTTACTTACAAAACAGTTTaGTTCCAGTTTGATGGACATACACACGAAGGCACTCAAATGAAA +
Preference number: 1 (lower is better)
Translates to: KVGLGLGCLFTYKTV*FQFDGHTHEGTQMK
Trigger: TTTCATTTGAGTGCCTTCGTGTGTATGTCCATCAAACTGGAACCAAACTGTTTTGTAAGTAAACAGGCAGCCTAAGCCCAACCCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 90 bp TATCTAATAGTGTTAGAAGTTCAGAAATTTAGTAAAAGGCTTAGCTaGGTAGTTCTGGCTCTCTTGAGGTCTTGGTCAAAAGATCAACTG +
Preference number: 1 (lower is better)
Translates to: YLIVLEVQKFSKRLS*VVLALLRSWSKDQL
Trigger: CAGTTGATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTACCCAGCTAAGCCTTTTACTAAATTTCTGAACTTCTAACACTATTAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR GCA 90 bp AGACTAATATGTACTTCTTACATAAGCAAGAAAACCACTACGAATTaGATTGAGTGTGAACATGACATATCCTCTCACTCTTGGTTAAGC +
Preference number: 1 (lower is better)
Translates to: RLICTSYISKKTTTN*IECEHDISSHSWLS
Trigger: GCTTAACCAAGAGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGCTTATGTAAGAAGTACATATTAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGCAGAGCACGTCTGGCTaGCTAGGTTTCTTCTCTGAC +
Preference number: 2 (lower is better)
Translates to: GFSQCQYGQREIKEEATVQSTSG*LGFFSD
Trigger: GTCAGAGAAGAAACCTAGTCAGCCAGACGTGCTCTG...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAACAGAGCACGTCTGGCTaGCTAGGTTTCTTCTCTGAC +
Preference number: 2 (lower is better)
Translates to: VRVVLILNIVQVHDPECEQSTSG*LGFFSD
Trigger: GTCAGAGAAGAAACCTAGTCAGCCAGACGTGCTCTG...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGAAGAGGGTGAGTTGCTaGGAAAACAGGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEKRVSC*ENRSLT
Trigger: AGTGAGTGACCTGTTTTCCCAGCAACTCACCCTCTT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCATGTGGCAGGAGTCTaGGCTGAACATGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYHVAGV*AEHGRK
Trigger: CTTCCTACCATGTTCAGCCCAGACTCCTGCCACATG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCTGGAGCAGGGAGTGTaGGAAGGTTTCAAGCGACAA +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYLEQGV*EGFKRQ
Trigger: TTGTCGCTTGAAACCTTCCCACACTCCCTGCTCCAG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 90 bp CTGAGCCATGAGAAAGAACTTCCACAGGCTCGATGGTTCTCAACTTaGGCTGAACATGTGAATCATTTGAGAGTGTTGATGCCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LSHEKELPQARWFST*AEHVNHLRVLMPVS
Trigger: AGACACAGGCATCAACACTCTCAAATGATTCACATGTTCAGCCAAAGTTGAGAACCATCGAGCCTGTGGAAGTTCTTTCTCATGGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 90 bp GTAGTTCTGGCTCTCTTGAGGTCTTGGTCAAAAGATCAACTGAAGTaGCAATTATCTGAAGACTTGACTGGAGGCTGGAGGATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VVLALLRSWSKDQLK*QLSEDLTGGWRICF
Trigger: GAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTCAGTTGATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGCATGGGCATACAGTTaGAACCATTGTTGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: TRVKHLPKILSHEKELPQAWAYS*NHCCPS
Trigger: GGAGGGACAACAATGGTTTCAACTGTATGCCCATGC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAAGTTTGGTTCCAGTTTaGTGGACATACACACGAAGG +
Preference number: 2 (lower is better)
Translates to: VRVVLILNIVQVHDPECESLVPV*WTYTRR
Trigger: CCTTCGTGTGTATGTCCATCAAACTGGAACCAAACT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTTCAGGCGTTTGGAGATaGAAGAGGGTGAGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTSGVWR*KRVSCW
Trigger: CCAGCAACTCACCCTCTTCCATCTCCAAACGCCTGA...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGCAGCAAAGGCATGGCTaGAGAGCGACTATATTAATA +
Preference number: 2 (lower is better)
Translates to: GFSQCQYGQREIKEEATVQQRHG*RATILI
Trigger: TATTAATATAGTCGCTCTTCAGCCATGCCTTTGCTG...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGCATGGGCATACAGTTaGAACCATTGTTGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMAWAYS*NHCCPS
Trigger: GGAGGGACAACAATGGTTTCAACTGTATGCCCATGC...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATACAGTGAAGGAGGATTaGAAATGTGGTTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYTVKED*KCGSCA
Trigger: TGCACAGGAACCACATTTTCAATCCTCCTTCACTGT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGAGTCCACACAGAATTTaGCTATCACTCTATCTGTCA +
Preference number: 2 (lower is better)
Translates to: PMVRVVLILNIVQVHDPESPHRI*LSLYLS
Trigger: TGACAGATAGAGTGATAGGCAAATTCTGTGTGGACT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGGAGGATTGAAAATGTaGTTCCTGTGCAAAGTATTC +
Preference number: 2 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEGGLKM*FLCKVF
Trigger: GAATACTTTGCACAGGAACCACATTTTCAATCCTCC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 90 bp GGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGTaGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTG +
Preference number: 2 (lower is better)
Translates to: GNAAKPQDFGKEFTM*IDVQIRGSGMGIQL
Trigger: CAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAAGTGCTGGTCTGATTTaGGGCTCTTTATCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: VRVVLILNIVQVHDPECESAGLI*GSLSFS
Trigger: TGAAAAAGATAAAGAGCCTCAAATCAGACCAGCACT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTTCACAAACTATTGCTaGATACAGAGCACGTCTGGC +
Preference number: 2 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTFTNYC*IQSTSG
Trigger: GCCAGACGTGCTCTGTATTCAGCAATAGTTTGTGAA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATACCTACCTAAGATTCTaGGCCATGAGAAAGAACTTC +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYTYLRF*AMRKNF
Trigger: GAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAAATTATCTTAGGGAATaGAGCAAAGCCCCAGGATTT +
Preference number: 2 (lower is better)
Translates to: VRVVLILNIVQVHDPECENYLRE*SKAPGF
Trigger: AAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATATATCCTCTCACTCTTaGTTAAGCTTCAGGCGTTTG +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYISSHS*LSFRRL
Trigger: CAAACGCCTGAAGCTTAACCAAGAGTGAGAGGATAT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGACGAAGGCACTCAAATaGAACCACTCTTGGCTAATA +
Preference number: 2 (lower is better)
Translates to: TRVKHLPKILSHEKELPQTKALK*NHSWLI
Trigger: TATTAGCCAAGAGTGGTTTCATTTGAGTGCCTTCGT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGTCAGGCGTTTGGAGATaGAAGAGGGTGAGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: GRFQATRRISNLFIHKLLSGVWR*KRVSCW
Trigger: CCAGCAACTCACCCTCTTCCATCTCCAAACGCCTGA...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAGATGGCTCCCTTACATaGCTGGCAAGTTGGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SNSHTYEASICFLRTNKEDGSLT*LASWCL
Trigger: CAAGCACCAACTTGCCAGCCATGTAAGGGAGCCATC...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
3UTR-3UTR TCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGCAGCAAAGGCATGGCTaGAGAGCGACTATATTAATA +
Preference number: 2 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMQQRHG*RATILI
Trigger: TATTAATATAGTCGCTCTTCAGCCATGCCTTTGCTG...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGAACAGGCAGATTAAATaGACAGGTAAATCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: TRVKHLPKILSHEKELPQNRQIK*TGKSPD
Trigger: ATCTGGGGATTTACCTGTTCATTTAATCTGCCTGTT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCTTCACAAACTATTGCTaGATACAGAGCACGTCTGGC +
Preference number: 2 (lower is better)
Translates to: KSTQNLPITLSVNNICFSFTNYC*IQSTSG
Trigger: GCCAGACGTGCTCTGTATTCAGCAATAGTTTGTGAA...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAAGAGGGTGAGTTGCTaGGAAAACAGGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTKRVSC*ENRSLT
Trigger: AGTGAGTGACCTGTTTTCCCAGCAACTCACCCTCTT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGGAGGATTGAAAATGTaGTTCCTGTGCAAAGTATTC +
Preference number: 2 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTGGLKM*FLCKVF
Trigger: GAATACTTTGCACAGGAACCACATTTTCAATCCTCC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTATGGTAGGAAGACAGTaGAGGAGGATTGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: KAFSCAVKDKHTASELKFMVGRQ*RRIENV
Trigger: CACATTTTCAATCCTCCTTCACTGTCTTCCTACCAT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTAAAACCACTACGAATTaGATTGAGTGTGAACATGAC +
Preference number: 2 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTKTTTN*IECEHD
Trigger: GTCATGTTCACACTCAATGCAATTCGTAGTGGTTTT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGAAAACCACTACGAATTaGATTGAGTGTGAACATGAC +
Preference number: 2 (lower is better)
Translates to: TRVKHLPKILSHEKELPQKTTTN*IECEHD
Trigger: GTCATGTTCACACTCAATGCAATTCGTAGTGGTTTT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGGGTTAATTAATCAGTaGTGGTCTGATTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: FESVDACVSLLRHSDLIEGLINQ*WSDLRL
Trigger: GAGCCTCAAATCAGACCAGCACTGATTAATTAACCC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTAAAGCCCCAGGATTTTaGCAAAGAGTTTACAATGTT +
Preference number: 2 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTKAPGF*QRVYNV
Trigger: AACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATTTAATTAATCAGTGCTaGTCTGATTTGAGGCTCTTT +
Preference number: 2 (lower is better)
Translates to: CIDCLPLILASGYTNHLYLINQC*SDLRLF
Trigger: AAAGAGCCTCAAATCAGACCAGCACTGATTAATTAA...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 90 bp GTTCAGAAATTTAGTAAAAGGCTTAGCTGGGTAGTTCTGGCTCTCTaGAGGTCTTGGTCAAAAGATCAACTGAAGTTGCAATTATCTGAA +
Preference number: 2 (lower is better)
Translates to: VQKFSKRLSWVVLAL*RSWSKDQLKLQLSE
Trigger: TTCAGATAATTGCAACTTCAGTTGATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTACCCAGCTAAGCCTTTTACTAAATTTCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAAGTGCTGGTCTGATTTaGGGCTCTTTATCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: FESVDACVSLLRHSDLIESAGLI*GSLSFS
Trigger: TGAAAAAGATAAAGAGCCTCAAATCAGACCAGCACT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTACTAGGTTTCTTCTCTaGCACCTATACATTCTGCTT +
Preference number: 2 (lower is better)
Translates to: KAFSCAVKDKHTASELKFTRFLL*HLYILL
Trigger: AAGCAGAATGTATAGGTGTCAGAGAAGAAACCTAGT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR GCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAAGTCCACACAGAATTTaGCTATCACTCTATCTGTCA +
Preference number: 2 (lower is better)
Translates to: FESVDACVSLLRHSDLIESPHRI*LSLYLS
Trigger: TGACAGATAGAGTGATAGGCAAATTCTGTGTGGACT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAATACAGAGCACGTCTaGCTGACTAGGTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SNSHTYEASICFLRTNKENTEHV*LTRFLL
Trigger: GAGAAGAAACCTAGTCAGCCAGACGTGCTCTGTATT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352690.9
3UTR-3UTR TCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAACCTACCTAAGATTCTaGGCCATGAGAAAGAACTTC +
Preference number: 2 (lower is better)
Translates to: SNSHTYEASICFLRTNKETYLRF*AMRKNF
Trigger: GAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
3UTR-3UTR GCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGGGTTAATTAATCAGTaGTGGTCTGATTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: GRFQATRRISNLFIHKLLGLINQ*WSDLRL
Trigger: GAGCCTCAAATCAGACCAGCACTGATTAATTAACCC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTAAAGCCCCAGGATTTTaGCAAAGAGTTTACAATGTT +
Preference number: 2 (lower is better)
Translates to: KAFSCAVKDKHTASELKFKAPGF*QRVYNV
Trigger: AACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTAGGCTACTGGGTTTTTaGCTAATTATCTCTTTGATC +
Preference number: 2 (lower is better)
Translates to: KAFSCAVKDKHTASELKFRLLGF*LIISLI
Trigger: GATCAAAGAGATAATTAGCCAAAAACCCAGTAGCCT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAAATTTTAGAGGCCAGTaGAGTTTTGTATCTTCTAGG +
Preference number: 2 (lower is better)
Translates to: FESVDACVSLLRHSDLIENFRGQ*SFVSSR
Trigger: CCTAGAAGATACAAAACTCCACTGGCCTCTAAAATT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGACACTGGGGCTCATCTaGGAGGCTGGCCACCACAAG +
Preference number: 3 (lower is better)
Translates to: PMVRVVLILNIVQVHDPETLGLI*EAGHHK
Trigger: CTTGTGGTGGCCAGCCTCCAAGATGAGCCCCAGTGT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp GTGAATAGTAGGAGGCAAGAACACTGGGGCTCATCTTaGAGGCTGGCCACCACAAGAGTTAAGCACCTACCT +
Preference number: 3 (lower is better)
Translates to: VNSRRQEHWGSS*RLATTRVKHLP
Trigger: AGGTAGGTGCTTAACTCTTGTGGTGGCCAGCCTCCAAGATGAGCCCCAGTGTTCTTGCCTCCTACTATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR GCA 72 bp CAATTATCTGAAGACTTGACTGGAGGCTGGAGGATCTaGTTCCAAGATGGCTCCCTTACATGGCTGGCAAGT +
Preference number: 3 (lower is better)
Translates to: QLSEDLTGGWRI*FQDGSLTWLAS
Trigger: ACTTGCCAGCCATGTAAGGGAGCCATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp GGTAGATTTCTCAATAGGGCTGCCTTGGTGTCTTCATaGCATGGGAATGGGCTTTTCCCAGTGTCAGTATGG +
Preference number: 3 (lower is better)
Translates to: GRFLNRAALVSS*HGNGLFPVSVW
Trigger: CCATACTGACACTGGGAAAAGCCCATTCCCATGCCATGAAGACACCAAGGCAGCCCTATTGAGAAATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTTAAGCTTCAGGCGTTaGGAGATGGAAGAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: PMVRVVLILNIVQVHDPELSFRR*EMEEGE
Trigger: CTCACCCTCTTCCATCTCCAAACGCCTGAAGCTTAA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGAGGCCAGTGGAGTTTaGTATCTTCTAGGCTACTGG +
Preference number: 3 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEEASGV*YLLGYW
Trigger: CCAGTAGCCTAGAAGATACAAAACTCCACTGGCCTC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR TCA 72 bp TGGCCACCACAAGAGTTAAGCACCTACCTAAGATTCTaGGCCATGAGAAAGAACTTCCACAGGCTCGATGGT +
Preference number: 3 (lower is better)
Translates to: WPPQELSTYLRF*AMRKNFHRLDG
Trigger: ACCATCGAGCCTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGTGGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp CTGAAGTTGCAATTATCTGAAGACTTGACTGGAGGCTaGAGGATCTGCTTCCAAGATGGCTCCCTTACATGG +
Preference number: 3 (lower is better)
Translates to: LKLQLSEDLTGG*RICFQDGSLTW
Trigger: CCATGTAAGGGAGCCATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAATTAAGCTTCAGGCGTTaGGAGATGGAAGAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: VRVVLILNIVQVHDPECELSFRR*EMEEGE
Trigger: CTCACCCTCTTCCATCTCCAAACGCCTGAAGCTTAA...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAGACAGTGAAGGAGGATaGAAAATGTGGTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: VRVVLILNIVQVHDPECEDSEGG*KMWFLC
Trigger: GCACAGGAACCACATTTTCAATCCTCCTTCACTGTC...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGCAAAGCCCCAGGATTTaGGCAAAGAGTTTACAATGT +
Preference number: 3 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEQSPRI*AKSLQC
Trigger: ACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTG...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR GCA 72 bp TTCCAAGATGGCTCCCTTACATGGCTGGCAAGTTGGTaGTTGTTAGCAAAATACCTTAGTTCCTTGACAGGT +
Preference number: 3 (lower is better)
Translates to: FQDGSLTWLASW*LLAKYLSSLTG
Trigger: ACCTGTCAAGGAACTAAGGTATTTTGCTAACAAGCACCAACTTGCCAGCCATGTAAGGGAGCCATCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp TGCATTGAGTGTGAACATGACATATCCTCTCACTCTTaGTTAAGCTTCAGGCGTTTGGAGATGGAAGAGGGT +
Preference number: 3 (lower is better)
Translates to: CIECEHDISSHS*LSFRRLEMEEG
Trigger: ACCCTCTTCCATCTCCAAACGCCTGAAGCTTAACCAAGAGTGAGAGGATATGTCATGTTCACACTCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp TCATGGCATGGGAATGGGCTTTTCCCAGTGTCAGTATaGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGTA +
Preference number: 3 (lower is better)
Translates to: SWHGNGLFPVSV*SKRDQRRSHSV
Trigger: TACACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCCCATTCCCATGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCATATCCTCTCACTCTaGGTTAAGCTTCAGGCGTTT +
Preference number: 3 (lower is better)
Translates to: CIDCLPLILASGYTNHLYHILSL*VKLQAF
Trigger: AAACGCCTGAAGCTTAACCAAGAGTGAGAGGATATG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAATACAGTTGAAACCATaGTTGTCCCTCCATCAGAGA +
Preference number: 3 (lower is better)
Translates to: VRVVLILNIVQVHDPECEIQLKP*LSLHQR
Trigger: TCTCTGATGGAGGGACAACAATGGTTTCAACTGTAT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAATACTTCTCCATTACTaGGCAGCCTTGTTAGCACTT +
Preference number: 3 (lower is better)
Translates to: VRVVLILNIVQVHDPECEILLHY*AALLAL
Trigger: AAGTGCTAACAAGGCTGCCAAGTAATGGAGAAGTAT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGGAACATGTGAATCATTaGAGAGTGTTGATGCCTGTG +
Preference number: 3 (lower is better)
Translates to: GFSQCQYGQREIKEEATVEHVNH*RVLMPV
Trigger: CACAGGCATCAACACTCTCAAATGATTCACATGTTC...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR TCA 72 bp AGAACTTCCACAGGCTCGATGGTTCTCAACTTTGGCTaGACATGTGAATCATTTGAGAGTGTTGATGCCTGT +
Preference number: 3 (lower is better)
Translates to: RTSTGSMVLNFG*TCESFESVDAC
Trigger: ACAGGCATCAACACTCTCAAATGATTCACATGTTCAGCCAAAGTTGAGAACCATCGAGCCTGTGGAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR TCA 72 bp GTCTTGGTCAAAAGATCAACTGAAGTTGCAATTATCTaGAGACTTGACTGGAGGCTGGAGGATCTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: VLVKRSTEVAII*RLDWRLEDLLP
Trigger: TGGAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTCAGTTGATCTTTTGACCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCATATCCTCTCACTCTaGGTTAAGCTTCAGGCGTTT +
Preference number: 3 (lower is better)
Translates to: TRVKHLPKILSHEKELPQHILSL*VKLQAF
Trigger: AAACGCCTGAAGCTTAACCAAGAGTGAGAGGATATG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTCAGTTTGGTTCCAGTTaGATGGACATACACACGAAG +
Preference number: 3 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTQFGSS*MDIHTK
Trigger: CTTCGTGTGTATGTCCATCAAACTGGAACCAAACTG...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCAGTGCTGGTCTGATTaGAGGCTCTTTATCTTTTTC +
Preference number: 3 (lower is better)
Translates to: CIDCLPLILASGYTNHLYQCWSD*RLFIFF
Trigger: GAAAAAGATAAAGAGCCTCAAATCAGACCAGCACTG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp ATTCTGAGCCATGAGAAAGAACTTCCACAGGCTCGATaGTTCTCAACTTTGGCTGAACATGTGAATCATTTG +
Preference number: 3 (lower is better)
Translates to: ILSHEKELPQAR*FSTLAEHVNHL
Trigger: CAAATGATTCACATGTTCAGCCAAAGTTGAGAACCATCGAGCCTGTGGAAGTTCTTTCTCATGGCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp AGGCTTAGCTGGGTAGTTCTGGCTCTCTTGAGGTCTTaGTCAAAAGATCAACTGAAGTTGCAATTATCTGAA +
Preference number: 3 (lower is better)
Translates to: RLSWVVLALLRS*SKDQLKLQLSE
Trigger: TTCAGATAATTGCAACTTCAGTTGATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTACCCAGCTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGATACAGTTGAAACCATaGTTGTCCCTCCATCAGAGA +
Preference number: 3 (lower is better)
Translates to: TRVKHLPKILSHEKELPQIQLKP*LSLHQR
Trigger: TCTCTGATGGAGGGACAACAATGGTTTCAACTGTAT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGACAGTGAAGGAGGATaGAAAATGTGGTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: KSTQNLPITLSVNNICFSDSEGG*KMWFLC
Trigger: GCACAGGAACCACATTTTCAATCCTCCTTCACTGTC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR TCA 72 bp CTGCCTGTTTACTTACAAAACAGTTTGGTTCCAGTTTaGTGGACATACACACGAAGGCACTCAAATGAAACC +
Preference number: 3 (lower is better)
Translates to: LPVYLQNSLVPV*WTYTRRHSNET
Trigger: GGTTTCATTTGAGTGCCTTCGTGTGTATGTCCATCAAACTGGAACCAAACTGTTTTGTAAGTAAACAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CCA 72 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATaGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGT +
Preference number: 3 (lower is better)
Translates to: LEKHSLVFFDMK*FNGERVSLLWS
Trigger: ACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
3UTR-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATCAGTTGAAACCATTGTaGTCCCTCCATCAGAGAATT +
Preference number: 3 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNQLKPL*SLHQRI
Trigger: AATTCTCTGATGGAGGGACAACAATGGTTTCAACTG...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCAGTTGAAACCATTGTaGTCCCTCCATCAGAGAATT +
Preference number: 3 (lower is better)
Translates to: KSTQNLPITLSVNNICFSQLKPL*SLHQRI
Trigger: AATTCTCTGATGGAGGGACAACAATGGTTTCAACTG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCATTACTTGGCAGCCTaGTTAGCACTTTTACATTTT +
Preference number: 3 (lower is better)
Translates to: TRVKHLPKILSHEKELPQHYLAA*LALLHF
Trigger: AAAATGTAAAAGTGCTAACAAGGCTGCCAAGTAATG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTTTCATTCACAAACTATaGCTGAATACAGAGCACGTC +
Preference number: 3 (lower is better)
Translates to: KAFSCAVKDKHTASELKFFIHKL*LNTEHV
Trigger: GACGTGCTCTGTATTCAGCAATAGTTTGTGAATGAA...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAATTCATTCACAAACTATaGCTGAATACAGAGCACGTC +
Preference number: 3 (lower is better)
Translates to: FESVDACVSLLRHSDLIEFIHKL*LNTEHV
Trigger: GACGTGCTCTGTATTCAGCAATAGTTTGTGAATGAA...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCATTACTTGGCAGCCTaGTTAGCACTTTTACATTTT +
Preference number: 3 (lower is better)
Translates to: KSTQNLPITLSVNNICFSHYLAA*LALLHF
Trigger: AAAATGTAAAAGTGCTAACAAGGCTGCCAAGTAATG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAAGTCCACACAGAATTaGCCTATCACTCTATCTGTC +
Preference number: 3 (lower is better)
Translates to: SNSHTYEASICFLRTNKEKSTQN*PITLSV
Trigger: GACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352690.9
3UTR GCA 72 bp TGTACTTCTTACATAAGCAAGAAAACCACTACGAATTaGATTGAGTGTGAACATGACATATCCTCTCACTCT +
Preference number: 3 (lower is better)
Translates to: CTSYISKKTTTN*IECEHDISSHS
Trigger: AGAGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGCTTATGTAAGAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR-3UTR CAA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGCCACTACGAATTGCATaGAGTGTGAACATGACATAT +
Preference number: 3 (lower is better)
Translates to: GRFQATRRISNLFIHKLLPLRIA*SVNMTY
Trigger: ATATGTCATGTTCACACTCAATGCAATTCGTAGTGG...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCTGGAATTGCTGGGTTaGGGAGTGGTGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHELELLG*GVVFGL
Trigger: GAGGCCAAACACCACTCCTCAACCCAGCAATTCCAG...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR GCA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGGACCCAAGAATCCGTaGTGCTGTTTTCCACCGACC +
Preference number: 4 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGGPKNP*CCFPPT
Trigger: GGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCC...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR GCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGGAGGCTGGAGGATCTaGTTCCAAGATGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEGGWRI*FQDGSL
Trigger: AAGGGAGCCATCTTGGAAGCAGATCCTCCAGCCTCC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GATCCCAGCCAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPSQYLLNRIPAEFCHGAVLDGR*WWLERW
Trigger: CCACCTTTCAAGCCACCACCACCTCCCATCAAGTAC...TGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTGGCTGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGTGGTGGTGGCTTaGAAGGTGGAGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHEVVVA*KVEVFP
Trigger: TGGAAAGACCTCCACCTTTCAAGCCACCACCACCTC...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTCCCAAGAATCCGTGCTaGTGTTTTCCACCGACCATG +
Preference number: 4 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGPKNPC*CFPPTM
Trigger: CATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGG...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGCTGGGTTGAGGAGTaGTGTTTGGCCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PMVRVVLILNIVQVHDPECWVEE*CLASRH
Trigger: GTGCCTTGAGGCCAAACACCACTCCTCAACCCAGCA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACTGCTGGGTTGAGGAGTaGTGTTTGGCCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHCWVEE*CLASRH
Trigger: GTGCCTTGAGGCCAAACACCACTCCTCAACCCAGCA...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGATGGCTCCCTTACATaGCTGGCAAGTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEDGSLT*LASWCL
Trigger: CAAGCACCAACTTGCCAGCCATGTAAGGGAGCCATC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGCAGGAGATACACTGCTaGCTGGAGAAGGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEQEIHC*LEKVGC
Trigger: ACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTG...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGTTGAGGAGTGGTGTTTaGCCTCAAGGCACTCACATC +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHELRSGV*PQGTHI
Trigger: GATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAA...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAATGCTGGGTTGAGGAGTaGTGTTTGGCCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECECWVEE*CLASRH
Trigger: GTGCCTTGAGGCCAAACACCACTCCTCAACCCAGCA...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAATGTGAAAGTCACAAGTaGCTCACAGGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGECESHK*LTGSPI
Trigger: TATGGGAGACCCTGTGAGTCACTTGTGACTTTCACA...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR TCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAAGTGCAGAGTCCATTTTaGCCCATTCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEVQSPF*PILRSF
Trigger: GAAACTCCTGAGAATGGGTCAAAATGGACTCTGCAC...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR GCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAATTGGACCATTGCATCTaGACGAAGAAGCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGELDHCI*TKKPTV
Trigger: GACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAA...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAACCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEPTVCV*QVRLTS
Trigger: TGATGTCAACCTGACCTGCCAAACACAGACAGTAGG...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGCAGGAGATACACTGCTaGCTGGAGAAGGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVQEIHC*LEKVGC
Trigger: ACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTG...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAAGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCT +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEGLSYW*PWTIAS
Trigger: AGATGCAATGGTCCAAGGTCACCAATAAGATAGACC...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR TCA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTTCTCAGGAGTTTCTGTaGAAGTCACAAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGSQEFL*KSQVTH
Trigger: GTGAGTCACTTGTGACTTTCACAGAAACTCCTGAGA...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR TCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGTCTCAGGAGTTTCTGTaGAAGTCACAAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHESQEFL*KSQVTH
Trigger: GTGAGTCACTTGTGACTTTCACAGAAACTCCTGAGA...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGAGGTGGTGGTGGCTTaGAAGGTGGAGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQEVVVA*KVEVFP
Trigger: TGGAAAGACCTCCACCTTTCAAGCCACCACCACCTC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACTTGGACCATTGCATCTaGACGAAGAAGCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHLDHCI*TKKPTV
Trigger: GACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAA...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp GATCCCAGCCAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAGCTGTTCCATTCATCTaGTGTAACGTGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: DPSQYLLNRIPAEFCHGAAVPFI*CNVCLN
Trigger: ATTCAGACACACGTTACAGCAGATGAATGGAACAGC...TGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTGGCTGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCCCAAGAATCCGTGCTaGTGTTTTCCACCGACCATG +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYPKNPC*CFPPTM
Trigger: CATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283285.10
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEIEDLD*REVESV
Trigger: TACAGACTCCACCTCTCTCCAGTCCAAATCTTCGAT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGAGCCATACACCAAATaGTCAAGTTGTCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEEPYTK*SSCLIG
Trigger: CCCAATCAGACAACTTGACCATTTGGTGTATGGCTC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATTCAGGCGTTTGGAGATaGAAGAGGGTGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYSGVWR*KRVSCW
Trigger: CCAGCAACTCACCCTCTTCCATCTCCAAACGCCTGA...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAGGTGTCTTCATGGCATaGGAATGGGCTTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECEGVFMA*EWAFPS
Trigger: ACTGGGAAAAGCCCATTCCCATGCCATGAAGACACC...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATGATCTGCTTCCAAGATaGCTCCCTTACATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYDLLPR*LPYMAG
Trigger: GCCAGCCATGTAAGGGAGCCATCTTGGAAGCAGATC...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGGTGCAGAGTCCATTTTaGCCCATTCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVVQSPF*PILRSF
Trigger: GAAACTCCTGAGAATGGGTCAAAATGGACTCTGCAC...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGACTCGTACCTTCCACTaGCTGAACAAGACATATTCC +
Preference number: 4 (lower is better)
Translates to: PMVRVVLILNIVQVHDPETRTFH*LNKTYS
Trigger: GGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACACTCGTACCTTCCACTaGCTGAACAAGACATATTCC +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHTRTFH*LNKTYS
Trigger: GGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGT...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTCCGACCATGCATAGGTaGACTCAGATGAAATTTTTG +
Preference number: 4 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGPTMHR*TQMKFL
Trigger: CAAAAATTTCATCTGAGTTCACCTATGCATGGTCGG...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR TCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGACGAAGGCACTCAAATaGAACCACTCTTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHETKALK*NHSWLI
Trigger: TATTAGCCAAGAGTGGTTTCATTTGAGTGCCTTCGT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGAGATAAGTGTTTCCTaGGTTCCATTATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEEISVS*VPLSST
Trigger: GGTGGAGGATAATGGAACTCAGGAAACACTTATCTC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAATGCTGTAACTTCCACTaGCTGAACAAGACATATTCC +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGECCNFH*LNKTYS
Trigger: GGAATATGTCTTGTTCAGTCAGTGGAAGTTACAGCA...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR GCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGCTGTTCCATTCATCTaGTGTAACGTGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEAVPFI*CNVCLN
Trigger: ATTCAGACACACGTTACAGCAGATGAATGGAACAGC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR GCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGGAGGCTGGAGGATCTaGTTCCAAGATGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTGGWRI*FQDGSL
Trigger: AAGGGAGCCATCTTGGAAGCAGATCCTCCAGCCTCC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACATCCATTGGCAGTTGTaGGGACTTCTGAAAATGCTC +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHIHWQL*GLLKML
Trigger: GAGCATTTTCAGAAGTCCCCACAACTGCCAATGGAT...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTCAGGCGTTTGGAGATaGAAGAGGGTGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTSGVWR*KRVSCW
Trigger: CCAGCAACTCACCCTCTTCCATCTCCAAACGCCTGA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTCATGTGGCAGGAGTCTaGGCTGAACATGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTHVAGV*AEHGRK
Trigger: CTTCCTACCATGTTCAGCCCAGACTCCTGCCACATG...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAGTCTTTCACCCAGATTaGAGTGTGCAGTGGCACAAT +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECEVFHPD*SVQWHN
Trigger: ATTGTGCCACTGCACACTCCAATCTGGGTGAAAGAC...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGTTTGCTCTGGAGTTTTaGGAAAATCAAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEFALEF*ENQRAP
Trigger: TGGAGCCCTTTGATTTTCCCAAAACTCCAGAGCAAA...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTCTGGAATTGCTGGGTTaGGGAGTGGTGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFLELLG*GVVFGL
Trigger: GAGGCCAAACACCACTCCTCAACCCAGCAATTCCAG...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTCTGGAATTGCTGGGTTaGGGAGTGGTGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFLELLG*GVVFGL
Trigger: GAGGCCAAACACCACTCCTCAACCCAGCAATTCCAG...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTAGTTGTGGGGACTTCTaGAAATGCTCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTSCGDF*KCSGCA
Trigger: AGCACAGCCAGAGCATTTTCAGAAGTCCCCACAACT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTGAGGTGGTGGTGGCTTaGAAGGTGGAGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFEVVVA*KVEVFP
Trigger: TGGAAAGACCTCCACCTTTCAAGCCACCACCACCTC...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGAATGCAAGTGTACTTaGTGGGAGGTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTECKCT*WEVVVA
Trigger: AGCCACCACCACCTCCCATCAAGTACACTTGCATTC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGAATGCAAGTGTACTTaGTGGGAGGTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERECKCT*WEVVVA
Trigger: AGCCACCACCACCTCCCATCAAGTACACTTGCATTC...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGACAGTGAAGGAGGATTaGAAATGTGGTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVTVKED*KCGSCA
Trigger: TGCACAGGAACCACATTTTCAATCCTCCTTCACTGT...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTCAGAGCACGTCTGGCTaGCTAGGTTTCTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTQSTSG*LGFFSD
Trigger: GTCAGAGAAGAAACCTAGTCAGCCAGACGTGCTCTG...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGTTCACAAACTATTGCTaGATACAGAGCACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVFTNYC*IQSTSG
Trigger: GCCAGACGTGCTCTGTATTCAGCAATAGTTTGTGAA...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAATTTCTATCGTATGGTTaGTGTTCCATTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEFLSYG*CSIHLL
Trigger: CAGCAGATGAATGGAACAGCAACCATACGATAGAAA...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR GCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGGACCCAAGAATCCGTaGTGCTGTTTTCCACCGACC +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSGPKNP*CCFPPT
Trigger: GGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283285.10
CDS-3UTR GCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGTTGCAGGAGATACACTaGTGGCTGGAGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMLQEIH*WLEKVG
Trigger: CCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAA...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCTTGCAGGAGATACACTaGTGGCTGGAGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFLQEIH*WLEKVG
Trigger: CCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAA...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGAATTATCTTAGGGAATaGAGCAAAGCCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHENYLRE*SKAPGF
Trigger: AAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAGGGTTGGGCTTAGGCTaGCTGTTTACTTACAAAACA +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECEGLGLG*LFTYKT
Trigger: TGTTTTGTAAGTAAACAGGCAGCCTAAGCCCAACCC...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVIEDLD*REVESV
Trigger: TACAGACTCCACCTCTCTCCAGTCCAAATCTTCGAT...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTGPTLM*QENFRP
Trigger: TGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCTACCAAGACATCCGTaGAGTTATTTTCCACAATCA +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHELPRHP*SYFPQS
Trigger: TGATTGTGGAAAATAACTCCACGGATGTCTTGGTAG...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCCACACTTTATTTCCTaGGACTGGAGACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYPHFIS*DWRQSH
Trigger: ATGGCTCTGTCTCCAGTCCCAGGAAATAAAGTGTGG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTCTGGCTGGAGAAGGTTaGGTGTCAAGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTLAGEG*VSRVDS
Trigger: AGAATCTACCCTTGACACCCAACCTTCTCCAGCCAG...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCCAGGAGATACACTGCTaGCTGGAGAAGGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFQEIHC*LEKVGC
Trigger: ACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTG...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTTGAGGAGTGGTGTTTaGCCTCAAGGCACTCACATC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTLRSGV*PQGTHI
Trigger: GATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGTCATACTGGAATTGCTaGGTTGAGGAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVSYWNC*VEEWCL
Trigger: CAAACACCACTCCTCAACCCAGCAATTCCAGTATGA...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMVLDGR*WWLERW
Trigger: CCACCTTTCAAGCCACCACCACCTCCCATCAAGTAC...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGAGCAGAGTTCTGCCATaGGGCAAAGTCTCACGAGAC +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMSRVLP*GKVSRD
Trigger: GTCTCGTGAGACTTTGCCCCATGGCAGAACTCTGCT...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGAATACAGAGCACGTCTaGCTGACTAGGTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVNTEHV*LTRFLL
Trigger: GAGAAGAAACCTAGTCAGCCAGACGTGCTCTGTATT...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCCTTGGTGTCTTCATaGCATGGGAATGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTALVSS*HGNGLF
Trigger: GAAAAGCCCATTCCCATGCCATGAAGACACCAAGGC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGATGGCTCCCTTACATaGCTGGCAAGTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTDGSLT*LASWCL
Trigger: CAAGCACCAACTTGCCAGCCATGTAAGGGAGCCATC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGACTTGACTGGAGGCTaGAGGATCTGCTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTDLTGG*RICFQD
Trigger: ATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp TCTTCTAGGCTACTGGGTTTTTGGCTAATTATCTCTTaGATCCCTCTTCATCCTGGTCCATGTGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSRLLGFWLIIS*IPLHPGPCGRS
Trigger: ACTCCTGCCACATGGACCAGGATGAAGAGGGATCAAAGAGATAATTAGCCAAAAACCCAGTAGCCTAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTCAAAATGTATCTGGATaGTGTAATAGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGQNVSG*CNRQHS
Trigger: ACTGTGCTGTCTATTACATCATCCAGATACATTTTG...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGTGTGAAAGTCACAAGTaGCTCACAGGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQCESHK*LTGSPI
Trigger: TATGGGAGACCCTGTGAGTCACTTGTGACTTTCACA...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATTCTCAGGAGTTTCTGTaGAAGTCACAAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYSQEFL*KSQVTH
Trigger: GTGAGTCACTTGTGACTTTCACAGAAACTCCTGAGA...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGTGCAGAGTCCATTTTaGCCCATTCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTVQSPF*PILRSF
Trigger: GAAACTCCTGAGAATGGGTCAAAATGGACTCTGCAC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGCCGACCATGCATAGGTaGACTCAGATGAAATTTTTG +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVPTMHR*TQMKFL
Trigger: CAAAAATTTCATCTGAGTTCACCTATGCATGGTCGG...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGAGTTGTGGGGACTTCTaGAAATGCTCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMSCGDF*KCSGCA
Trigger: AGCACAGCCAGAGCATTTTCAGAAGTCCCCACAACT...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGAATGCAAGTGTACTTaGTGGGAGGTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEECKCT*WEVVVA
Trigger: AGCCACCACCACCTCCCATCAAGTACACTTGCATTC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAACAGAGCACGTCTGGCTaGCTAGGTTTCTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEQSTSG*LGFFSD
Trigger: GTCAGAGAAGAAACCTAGTCAGCCAGACGTGCTCTG...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCCACAGTGTATTTTGTaGCCTAGCCTTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQPQCIL*PSLGHF
Trigger: GAAGTGACCAAGGCTAGGTCACAAAATACACTGTGG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTTGGACCATTGCATCTaGACGAAGAAGCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTLDHCI*TKKPTV
Trigger: GACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTTTCTATCGTATGGTTaGTGTTCCATTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEFLSYG*CSIHLL
Trigger: CAGCAGATGAATGGAACAGCAACCATACGATAGAAA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACTTTCTATCGTATGGTTaGTGTTCCATTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHFLSYG*CSIHLL
Trigger: CAGCAGATGAATGGAACAGCAACCATACGATAGAAA...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGTCAACATTGTGCAAGTaGATGACCCTGAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVSTLCK*MTLSVN
Trigger: ATTCACACTCAGGGTCATGCACTTGCACAATGTTGA...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAATCATTCTCAACATTGTaGAAGTGCATGACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECESFSTL*KCMTLS
Trigger: ACTCAGGGTCATGCACTTGCACAATGTTGAGAATGA...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFGPTLM*QENFRP
Trigger: TGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCC...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGAATCACAGGGATTTCTaGTTTAGCAAAAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHENHRDF*FSKNLD
Trigger: GTCAAGGTTTTTGCTAAACCAGAAATCCCTGTGATT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATTTTATTTCCTGGGACTaGAGACAGAGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYFISWD*RQSHTP
Trigger: TGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAAA...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFVLDGR*WWLERW
Trigger: CCACCTTTCAAGCCACCACCACCTCCCATCAAGTAC...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTAGCAGAGTTCTGCCATaGGGCAAAGTCTCACGAGAC +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFSRVLP*GKVSRD
Trigger: GTCTCGTGAGACTTTGCCCCATGGCAGAACTCTGCT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTAGCAGAGTTCTGCCATaGGGCAAAGTCTCACGAGAC +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFSRVLP*GKVSRD
Trigger: GTCTCGTGAGACTTTGCCCCATGGCAGAACTCTGCT...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGCTCATCTTGGAGGCTaGCCACCACAAGAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEAHLGG*PPQELS
Trigger: GCTTAACTCTTGTGGTGGCCAGCCTCCAAGATGAGC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGATTGGAGTGTGCAGTaGCACAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSDWSVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGCACACTCCAATC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGATTGGAGTGTGCAGTaGCACAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNDWSVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGCACACTCCAATC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGACATGGCTGGCAAGTTaGTGCTTGTTAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVTWLAS*CLLAKY
Trigger: GTATTTTGCTAACAAGCACCAACTTGCCAGCCATGT...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp TCAAAAGATCAACTGAAGTTGCAATTATCTGAAGACTaGACTGGAGGCTGGAGGATCTGCTTCCAAGATGGC +
Preference number: 4 (lower is better)
Translates to: SKDQLKLQLSED*TGGWRICFQDG
Trigger: GCCATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTCAGTTGATCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACCAAAATGTATCTGGATaGTGTAATAGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHQNVSG*CNRQHS
Trigger: ACTGTGCTGTCTATTACATCATCCAGATACATTTTG...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTCTCAGGAGTTTCTGTaGAAGTCACAAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTSQEFL*KSQVTH
Trigger: GTGAGTCACTTGTGACTTTCACAGAAACTCCTGAGA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCGTGCAGAGTCCATTTTaGCCCATTCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFVQSPF*PILRSF
Trigger: GAAACTCCTGAGAATGGGTCAAAATGGACTCTGCAC...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCCGACCATGCATAGGTaGACTCAGATGAAATTTTTG +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYPTMHR*TQMKFL
Trigger: CAAAAATTTCATCTGAGTTCACCTATGCATGGTCGG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAGAATTGCTGATGAGGTaGTTTTGGGAGATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECEELLMR*FWEISV
Trigger: AACACTTATCTCCCAAAATCACCTCATCAGCAATTC...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATATCTACAAGGGTCACTaGAGATGTAGCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYIYKGH*RCSWIS
Trigger: AGATATCCAGCTACATCTTCAGTGACCCTTGTAGAT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCAAGTTGTGGGGACTTCTaGAAATGCTCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPSCGDF*KCSGCA
Trigger: AGCACAGCCAGAGCATTTTCAGAAGTCCCCACAACT...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATCCAGTGATATGGACGTaGTTAGTTTTCGTAGATCCA +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYPVIWT*LVFVDP
Trigger: TGGATCTACGAAAACTAATCACGTCCATATCACTGG...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTGCATGGGCATACAGTTaGAACCATTGTTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFAWAYS*NHCCPS
Trigger: GGAGGGACAACAATGGTTTCAACTGTATGCCCATGC...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTAGTTTGGTTCCAGTTTaGTGGACATACACACGAAGG +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTSLVPV*WTYTRR
Trigger: CCTTCGTGTGTATGTCCATCAAACTGGAACCAAACT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGAAGTTGCAATTATCTaGAGACTTGACTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQEVAII*RLDWRL
Trigger: CAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCGAAATGGTTCAACGGTaGGAGGGTAAGTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFEMVQR*EGKFAL
Trigger: CAGAGCAAACTTACCCTCTCACCGTTGAACCATTTC...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATAGTCTGAATGCCCTCTaGATACAGAACAAGCATACA +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYSLNAL*IQNKHT
Trigger: TGTATGCTTGTTCTGTATCCAGAGGGCATTCAGACT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTIEDLD*REVESV
Trigger: TACAGACTCCACCTCTCTCCAGTCCAAATCTTCGAT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTGPTLM*QENFRP
Trigger: TGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCC...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACAATCACAGGGATTTCTaGTTTAGCAAAAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHNHRDF*FSKNLD
Trigger: GTCAAGGTTTTTGCTAAACCAGAAATCCCTGTGATT...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGAGCCATACACCAAATaGTCAAGTTGTCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQEPYTK*SSCLIG
Trigger: CCCAATCAGACAACTTGACCATTTGGTGTATGGCTC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGCTGGCTGGAGAAGGTTaGGTGTCAAGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWLAGEG*VSRVDS
Trigger: AGAATCTACCCTTGACACCCAACCTTCTCCAGCCAG...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIERYTAG*RRLGVK
Trigger: CTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFRYTAG*RRLGVK
Trigger: CTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFRYTAG*RRLGVK
Trigger: CTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCT...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTTTGAGGAGTGGTGTTTaGCCTCAAGGCACTCACATC +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFLRSGV*PQGTHI
Trigger: GATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAA...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTATCCATTGGCAGTTGTaGGGACTTCTGAAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTIHWQL*GLLKML
Trigger: GAGCATTTTCAGAAGTCCCCACAACTGCCAATGGAT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACACTGGAGCAGGGAGTGTaGGAAGGTTTCAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTLEQGV*EGFKRQ
Trigger: TTGTCGCTTGAAACCTTCCCACACTCCCTGCTCCAG...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAATTCCCAGTGTCAGTATaGTCAAAGAGAGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: VRVVLILNIVQVHDPECEFPVSV*SKRDQR
Trigger: TCTTTGATCTCTCTTTGACCATACTGACACTGGGAA...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGCCTTGGTGTCTTCATaGCATGGGAATGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEALVSS*HGNGLF
Trigger: GAAAAGCCCATTCCCATGCCATGAAGACACCAAGGC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAGATCTGCTTCCAAGATaGCTCCCTTACATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKDLLPR*LPYMAG
Trigger: GCCAGCCATGTAAGGGAGCCATCTTGGAAGCAGATC...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGACTTGACTGGAGGCTaGAGGATCTGCTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNDLTGG*RICFQD
Trigger: ATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAGTC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp GAGAAAGAACTTCCACAGGCTCGATGGTTCTCAACTTaGGCTGAACATGTGAATCATTTGAGAGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: EKELPQARWFST*AEHVNHLRVLM
Trigger: CATCAACACTCTCAAATGATTCACATGTTCAGCCAAAGTTGAGAACCATCGAGCCTGTGGAAGTTCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCTGTGAAAGTCACAAGTaGCTCACAGGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSCESHK*LTGSPI
Trigger: TATGGGAGACCCTGTGAGTCACTTGTGACTTTCACA...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCATGTGAAAGTCACAAGTaGCTCACAGGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPCESHK*LTGSPI
Trigger: TATGGGAGACCCTGTGAGTCACTTGTGACTTTCACA...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGATCTACAAGGGTCACTaGAGATGTAGCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQIYKGH*RCSWIS
Trigger: AGATATCCAGCTACATCTTCAGTGACCCTTGTAGAT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAGCATGGGCATACAGTTaGAACCATTGTTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKAWAYS*NHCCPS
Trigger: GGAGGGACAACAATGGTTTCAACTGTATGCCCATGC...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGACCTACCTAAGATTCTaGGCCATGAGAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQTYLRF*AMRKNF
Trigger: GAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTCCACAGTGTATTTTGTaGCCTAGCCTTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFPQCIL*PSLGHF
Trigger: GAAGTGACCAAGGCTAGGTCACAAAATACACTGTGG...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGAAGTTGCAATTATCTaGAGACTTGACTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTEVAII*RLDWRL
Trigger: CAGCCTCCAGTCAAGTCTTCAGATAATTGCAACTTC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGGGTCAAAAGATCAACTaGAGTTGCAATTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVGQKIN*SCNYLK
Trigger: CTTCAGATAATTGCAACTTCAGTTGATCTTTTGACC...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCGAGATAAGTGTTTCCTaGGTTCCATTATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFEISVS*VPLSST
Trigger: GGTGGAGGATAATGGAACTCAGGAAACACTTATCTC...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR GCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGCTGTTCCATTCATCTaGTGTAACGTGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQAVPFI*CNVCLN
Trigger: ATTCAGACACACGTTACAGCAGATGAATGGAACAGC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGTTGCAGGAGATACACTaGTGGCTGGAGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLLQEIH*WLEKVG
Trigger: CCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAA...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTTGCAGGAGATACACTaGTGGCTGGAGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSALQEIH*WLEKVG
Trigger: CCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR GCA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGAAAACCACTACGAATTaGATTGAGTGTGAACATGAC +
Preference number: 4 (lower is better)
Translates to: GFSQCQYGQREIKEEATVKTTTN*IECEHD
Trigger: GTCATGTTCACACTCAATGCAATTCGTAGTGGTTTT...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCACCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPPTVCV*QVRLTS
Trigger: TGATGTCAACCTGACCTGCCAAACACAGACAGTAGG...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAACCATCATCGAAGATTTaGACTGGAGAGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEPSSKI*TGERWS
Trigger: ACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGG...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCCATCATCGAAGATTTaGACTGGAGAGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSPSSKI*TGERWS
Trigger: ACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCACCATCATCGAAGATTTaGACTGGAGAGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPPSSKI*TGERWS
Trigger: ACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGG...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAGPTLM*QENFRP
Trigger: TGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTTTTATTTCCTGGGACTaGAGACAGAGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTFISWD*RQSHTP
Trigger: TGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAAA...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCACCACACTTTATTTCCTaGGACTGGAGACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPPHFIS*DWRQSH
Trigger: ATGGCTCTGTCTCCAGTCCCAGGAAATAAAGTGTGG...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACACTGGCTGGAGAAGGTTaGGTGTCAAGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTLAGEG*VSRVDS
Trigger: AGAATCTACCCTTGACACCCAACCTTCTCCAGCCAG...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCAGGAGATACACTGCTaGCTGGAGAAGGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAQEIHC*LEKVGC
Trigger: ACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTTGGTGGCTTGAAAGGTaGAGGTCTTTCCATTATTTC +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTWWLER*RSFHYF
Trigger: GAAATAATGGAAAGACCTCCACCTTTCAAGCCACCA...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCGCAGATCACTTTCGTTaGGCTCTTGAATGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFADHFR*ALECKC
Trigger: ACACTTGCATTCAAGAGCCCAACGAAAGTGATCTGC...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATAAGAGGGTGAGTTGCTaGGAAAACAGGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNKRVSC*ENRSLT
Trigger: AGTGAGTGACCTGTTTTCCCAGCAACTCACCCTCTT...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGATATCCTCTCACTCTTaGTTAAGCTTCAGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQISSHS*LSFRRL
Trigger: CAAACGCCTGAAGCTTAACCAAGAGTGAGAGGATAT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTAATACAGAGCACGTCTaGCTGACTAGGTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTNTEHV*LTRFLL
Trigger: GAGAAGAAACCTAGTCAGCCAGACGTGCTCTGTATT...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGCTGGAGCAGGGAGTGTaGGAAGGTTTCAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLLEQGV*EGFKRQ
Trigger: TTGTCGCTTGAAACCTTCCCACACTCCCTGCTCCAG...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGCTCATCTTGGAGGCTaGCCACCACAAGAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLAHLGG*PPQELS
Trigger: GCTTAACTCTTGTGGTGGCCAGCCTCCAAGATGAGC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATATCTGTATTCAGCATTaGAGGGGACCACATAAAGAT +
Preference number: 4 (lower is better)
Translates to: CIDCLPLILASGYTNHLYICIQH*RGPHKD
Trigger: ATCTTTATGTGGTCCCCTCCAATGCTGAATACAGAT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGGTGTCTTCATGGCATaGGAATGGGCTTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTGVFMA*EWAFPS
Trigger: ACTGGGAAAAGCCCATTCCCATGCCATGAAGACACC...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTCTCTTTCTTGGGTaGAGTCTGGAGAAACACAGC +
Preference number: 4 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWSLFLG*SLEKHS
Trigger: GCTGTGTTTCTCCAGACTCCACCCAAGAAAGAGACT...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
3UTR CAA 72 bp TCAACTTTGGCTGAACATGTGAATCATTTGAGAGTGTaGATGCCTGTGTCTCACTCCTCAGACATTCTGATT +
Preference number: 4 (lower is better)
Translates to: STLAEHVNHLRV*MPVSHSSDILI
Trigger: AATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAATGATTCACATGTTCAGCCAAAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp TTTAGTAAAAGGCTTAGCTGGGTAGTTCTGGCTCTCTaGAGGTCTTGGTCAAAAGATCAACTGAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: FSKRLSWVVLAL*RSWSKDQLKLQ
Trigger: TTGCAACTTCAGTTGATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTACCCAGCTAAGCCTTTTACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp TTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTaGCTCTGGAGTTTTGGGAAAATCAAAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FDMKWFNGERVS*LWSFGKIKGLQ
Trigger: TTGGAGCCCTTTGATTTTCCCAAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCT +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNGLSYW*PWTIAS
Trigger: AGATGCAATGGTCCAAGGTCACCAATAAGATAGACC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCT +
Preference number: 4 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFGLSYW*PWTIAS
Trigger: AGATGCAATGGTCCAAGGTCACCAATAAGATAGACC...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCTTTCGTTGGGCTCTTaGATGCAAGTGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSLSLGS*MQVYLM
Trigger: CATCAAGTACACTTGCATTCAAGAGCCCAACGAAAG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGCTTTCGTTGGGCTCTTaGATGCAAGTGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWLSLGS*MQVYLM
Trigger: CATCAAGTACACTTGCATTCAAGAGCCCAACGAAAG...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTACAGTGAAGGAGGATTaGAAATGTGGTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFTVKED*KCGSCA
Trigger: TGCACAGGAACCACATTTTCAATCCTCCTTCACTGT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGATGGTAGGAAGACAGTaGAGGAGGATTGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMMVGRQ*RRIENV
Trigger: CACATTTTCAATCCTCCTTCACTGTCTTCCTACCAT...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGACGAAGGCACTCAAATaGAACCACTCTTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMTKALK*NHSWLI
Trigger: TATTAGCCAAGAGTGGTTTCATTTGAGTGCCTTCGT...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTAACAGGCAGATTAAATaGACAGGTAAATCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTNRQIK*TGKSPD
Trigger: ATCTGGGGATTTACCTGTTCATTTAATCTGCCTGTT...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTACCTACCTAAGATTCTaGGCCATGAGAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTTYLRF*AMRKNF
Trigger: GAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGT...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTAATTATCTGAAGACTTaGCTGGAGGCTGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFNYLKT*LEAGGS
Trigger: AGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGGTTGGGCTTAGGCTaGCTGTTTACTTACAAAACA +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNGLGLG*LFTYKT
Trigger: TGTTTTGTAAGTAAACAGGCAGCCTAAGCCCAACCC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGGGTTAATTAATCAGTaGTGGTCTGATTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTGLINQ*WSDLRL
Trigger: GAGCCTCAAATCAGACCAGCACTGATTAATTAACCC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAACCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKPTVCV*QVRLTS
Trigger: TGATGTCAACCTGACCTGCCAAACACAGACAGTAGG...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGTTTATTTCCTGGGACTaGAGACAGAGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWFISWD*RQSHTP
Trigger: TGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAAA...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAACCACACTTTATTTCCTaGGACTGGAGACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKPHFIS*DWRQSH
Trigger: ATGGCTCTGTCTCCAGTCCCAGGAAATAAAGTGTGG...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCTGGCTGGAGAAGGTTaGGTGTCAAGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSALAGEG*VSRVDS
Trigger: AGAATCTACCCTTGACACCCAACCTTCTCCAGCCAG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSARYTAG*RRLGVK
Trigger: CTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCATCATACTGGAATTGCTaGGTTGAGGAGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPSYWNC*VEEWCL
Trigger: CAAACACCACTCCTCAACCCAGCAATTCCAGTATGA...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCATCCATTGGCAGTTGTaGGGACTTCTGAAAATGCTC +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSIHWQL*GLLKML
Trigger: GAGCATTTTCAGAAGTCCCCACAACTGCCAATGGAT...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGTGGTGGCTTGAAAGGTaGAGGTCTTTCCATTATTTC +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMWWLER*RSFHYF
Trigger: GAAATAATGGAAAGACCTCCACCTTTCAAGCCACCA...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGCAGATCACTTTCGTTaGGCTCTTGAATGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEADHFR*ALECKC
Trigger: ACACTTGCATTCAAGAGCCCAACGAAAGTGATCTGC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGCAGATCACTTTCGTTaGGCTCTTGAATGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSADHFR*ALECKC
Trigger: ACACTTGCATTCAAGAGCCCAACGAAAGTGATCTGC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTGTGAAAGTCACAAGTaGCTCACAGGGTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSACESHK*LTGSPI
Trigger: TATGGGAGACCCTGTGAGTCACTTGTGACTTTCACA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGTGCAGAGTCCATTTTaGCCCATTCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAVQSPF*PILRSF
Trigger: GAAACTCCTGAGAATGGGTCAAAATGGACTCTGCAC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAACTCGTACCTTCCACTaGCTGAACAAGACATATTCC +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKTRTFH*LNKTYS
Trigger: GGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGT...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCACCGACCATGCATAGGTaGACTCAGATGAAATTTTTG +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPPTMHR*TQMKFL
Trigger: CAAAAATTTCATCTGAGTTCACCTATGCATGGTCGG...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAATGGTCAAGTTGTCTaGTTGGGCTGGTTTATTACT +
Preference number: 4 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFNGQVV*LGWFIT
Trigger: AGTAATAAACCAGCCCAATCAGACAACTTGACCATT...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGATCTACAAGGGTCACTaGAGATGTAGCTGGATATCT +
Preference number: 4 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWIYKGH*RCSWIS
Trigger: AGATATCCAGCTACATCTTCAGTGACCCTTGTAGAT...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTCCAGTGATATGGACGTaGTTAGTTTTCGTAGATCCA +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFPVIWT*LVFVDP
Trigger: TGGATCTACGAAAACTAATCACGTCCATATCACTGG...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCACCAGTGATATGGACGTaGTTAGTTTTCGTAGATCCA +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPPVIWT*LVFVDP
Trigger: TGGATCTACGAAAACTAATCACGTCCATATCACTGG...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACACTTTCGTTGGGCTCTTaGATGCAAGTGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTLSLGS*MQVYLM
Trigger: CATCAAGTACACTTGCATTCAAGAGCCCAACGAAAG...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATCAGCAAAGGCATGGCTaGAGAGCGACTATATTAATA +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNQQRHG*RATILI
Trigger: TATTAATATAGTCGCTCTTCAGCCATGCCTTTGCTG...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCATGGTAGGAAGACAGTaGAGGAGGATTGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSMVGRQ*RRIENV
Trigger: CACATTTTCAATCCTCCTTCACTGTCTTCCTACCAT...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTAACAGGCAGATTAAATaGACAGGTAAATCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTNRQIK*TGKSPD
Trigger: ATCTGGGGATTTACCTGTTCATTTAATCTGCCTGTT...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAATTCACAAACTATTGCTaGATACAGAGCACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKFTNYC*IQSTSG
Trigger: GCCAGACGTGCTCTGTATTCAGCAATAGTTTGTGAA...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGGTCAAAAGATCAACTaGAGTTGCAATTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQGQKIN*SCNYLK
Trigger: CTTCAGATAATTGCAACTTCAGTTGATCTTTTGACC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAATTGGACCATTGCATCTaGACGAAGAAGCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKELDHCI*TKKPTV
Trigger: GACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAA...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR GCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTTGGACCATTGCATCTaGACGAAGAAGCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSALDHCI*TKKPTV
Trigger: GACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR GCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAATCATTCTCAACATTGTaGAAGTGCATGACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIESFSTL*KCMTLS
Trigger: ACTCAGGGTCATGCACTTGCACAATGTTGAGAATGA...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAACCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKEPTVCV*QVRLTS
Trigger: TGATGTCAACCTGACCTGCCAAACACAGACAGTAGG...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAPTVCV*QVRLTS
Trigger: TGATGTCAACCTGACCTGCCAAACACAGACAGTAGG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAAGTCTGAATGCCCTCTaGATACAGAACAAGCATACA +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIESLNAL*IQNKHT
Trigger: TGTATGCTTGTTCTGTATCCAGAGGGCATTCAGACT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCAAGTCTGAATGCCCTCTaGATACAGAACAAGCATACA +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPSLNAL*IQNKHT
Trigger: TGTATGCTTGTTCTGTATCCAGAGGGCATTCAGACT...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCCATCATCGAAGATTTaGACTGGAGAGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAPSSKI*TGERWS
Trigger: ACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGCTACCAAGACATCCGTaGAGTTATTTTCCACAATCA +
Preference number: 4 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERLPRHP*SYFPQS
Trigger: TGATTGTGGAAAATAACTCCACGGATGTCTTGGTAG...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCCACACTTTATTTCCTaGGACTGGAGACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAPHFIS*DWRQSH
Trigger: ATGGCTCTGTCTCCAGTCCCAGGAAATAAAGTGTGG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCATGGTGGCTTGAAAGGTaGAGGTCTTTCCATTATTTC +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPWWLER*RSFHYF
Trigger: GAAATAATGGAAAGACCTCCACCTTTCAAGCCACCA...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAATATCCTCTCACTCTTaGTTAAGCTTCAGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: FESVDACVSLLRHSDLIEISSHS*LSFRRL
Trigger: CAAACGCCTGAAGCTTAACCAAGAGTGAGAGGATAT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGGAGGATTGAAAATGTaGTTCCTGTGCAAAGTATTC +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMGGLKM*FLCKVF
Trigger: GAATACTTTGCACAGGAACCACATTTTCAATCCTCC...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTTTCCCAGTGTCAGTATaGTCAAAGAGAGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTFPVSV*SKRDQR
Trigger: TCTTTGATCTCTCTTTGACCATACTGACACTGGGAA...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGTCTTTCACCCAGATTaGAGTGTGCAGTGGCACAAT +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLVFHPD*SVQWHN
Trigger: ATTGTGCCACTGCACACTCCAATCTGGGTGAAAGAC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCACATGGCTGGCAAGTTaGTGCTTGTTAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSTWLAS*CLLAKY
Trigger: GTATTTTGCTAACAAGCACCAACTTGCCAGCCATGT...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCT +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLGLSYW*PWTIAS
Trigger: AGATGCAATGGTCCAAGGTCACCAATAAGATAGACC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAGLSYW*PWTIAS
Trigger: AGATGCAATGGTCCAAGGTCACCAATAAGATAGACC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTCTCAGGAGTTTCTGTaGAAGTCACAAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSASQEFL*KSQVTH
Trigger: GTGAGTCACTTGTGACTTTCACAGAAACTCCTGAGA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTACTCGTACCTTCCACTaGCTGAACAAGACATATTCC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSATRTFH*LNKTYS
Trigger: GGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTGAGATAAGTGTTTCCTaGGTTCCATTATCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFEISVS*VPLSSF
Trigger: AAAGGAGGATAATGGAACTCAGGAAACACTTATCTC...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283285.10
CDS-3UTR TCA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCAGAATTGCTGATGAGGTaGTTTTGGGAGATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPELLMR*FWEISV
Trigger: AACACTTATCTCCCAAAATCACCTCATCAGCAATTC...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATAATGGTCAAGTTGTCTaGTTGGGCTGGTTTATTACT +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNNGQVV*LGWFIT
Trigger: AGTAATAAACCAGCCCAATCAGACAACTTGACCATT...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGAGTTTGGTTCCAGTTTaGTGGACATACACACGAAGG +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLSLVPV*WTYTRR
Trigger: CCTTCGTGTGTATGTCCATCAAACTGGAACCAAACT...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAATTATCTGAAGACTTaGCTGGAGGCTGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKENYLKT*LEAGGS
Trigger: AGATCCTCCAGCCTCCAGTCAAGTCTTCAGATAATT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGAGATAAGTGTTTCCTaGGTTCCATTATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAEISVS*VPLSST
Trigger: GGTGGAGGATAATGGAACTCAGGAAACACTTATCTC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGCAGCTTAGTTTTCTTTaGTATGAAATGGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERQLSFL*YEMVQR
Trigger: CCGTTGAACCATTTCATATCAAAGAAAACTAAGCTG...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAIEDLD*REVESV
Trigger: TACAGACTCCACCTCTCTCCAGTCCAAATCTTCGAT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGAGCCATACACCAAATaGTCAAGTTGTCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAEPYTK*SSCLIG
Trigger: CCCAATCAGACAACTTGACCATTTGGTGTATGGCTC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTTTATTTCCTGGGACTaGAGACAGAGCCATACACCA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAFISWD*RQSHTP
Trigger: TGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAAA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGAATTTTAGAGGCCAGTaGAGTTTTGTATCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMNFRGQ*SFVSSR
Trigger: CCTAGAAGATACAAAACTCCACTGGCCTCTAAAATT...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGTTAATTAATCAGTGCTaGTCTGATTTGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TRVKHLPKILSHEKELPQLINQC*SDLRLF
Trigger: AAAGAGCCTCAAATCAGACCAGCACTGATTAATTAA...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTATCTGTATTCAGCATTaGAGGGGACCACATAAAGAT +
Preference number: 4 (lower is better)
Translates to: KAFSCAVKDKHTASELKFICIQH*RGPHKD
Trigger: ATCTTTATGTGGTCCCCTCCAATGCTGAATACAGAT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGAGGGTAAGTTTGCTCTaGAGTTTTGGGAAAATCAAA +
Preference number: 4 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERRVSLL*SFGKIK
Trigger: TTTGATTTTCCCAAAACTCCAGAGCAAACTTACCCT...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CCA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGTTCTTTGATATGAAATaGTTCAACGGTGAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERFFDMK*FNGERV
Trigger: TACCCTCTCACCGTTGAACCATTTCATATCAAAGAA...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR TCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCAAAATGTATCTGGATaGTGTAATAGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSQNVSG*CNRQHS
Trigger: ACTGTGCTGTCTATTACATCATCCAGATACATTTTG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCCGACCATGCATAGGTaGACTCAGATGAAATTTTTG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAPTMHR*TQMKFL
Trigger: CAAAAATTTCATCTGAGTTCACCTATGCATGGTCGG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGAATTGCTGATGAGGTaGTTTTGGGAGATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTELLMR*FWEISV
Trigger: AACACTTATCTCCCAAAATCACCTCATCAGCAATTC...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAATGGTCAAGTTGTCTaGTTGGGCTGGTTTATTACT +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTNGQVV*LGWFIT
Trigger: AGTAATAAACCAGCCCAATCAGACAACTTGACCATT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGCAGCAAAGGCATGGCTaGAGAGCGACTATATTAATA +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLQQRHG*RATILI
Trigger: TATTAATATAGTCGCTCTTCAGCCATGCCTTTGCTG...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAGTGCTGGTCTGATTTaGGGCTCTTTATCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTSAGLI*GSLSFS
Trigger: TGAAAAAGATAAAGAGCCTCAAATCAGACCAGCACT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAACTAGGTTTCTTCTCTaGCACCTATACATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKTRFLL*HLYILL
Trigger: AAGCAGAATGTATAGGTGTCAGAGAAGAAACCTAGT...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGACCACATAAAGATGTaGATAGTAGGAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLDHIKM*IVGGKN
Trigger: GTTCTTGCCTCCTACTATTCACATCTTTATGTGGTC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGCTGTTCCATTCATCTaGTGTAACGTGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAAVPFI*CNVCLN
Trigger: ATTCAGACACACGTTACAGCAGATGAATGGAACAGC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR GCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACATTTCTATCGTATGGTTaGTGTTCCATTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTFLSYG*CSIHLL
Trigger: CAGCAGATGAATGGAACAGCAACCATACGATAGAAA...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCAAAACCACTACGAATTaGATTGAGTGTGAACATGAC +
Preference number: 4 (lower is better)
Translates to: KSTQNLPITLSVNNICFSKTTTN*IECEHD
Trigger: GTCATGTTCACACTCAATGCAATTCGTAGTGGTTTT...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAGTCCACACAGAATTTaGCTATCACTCTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTSPHRI*LSLYLS
Trigger: TGACAGATAGAGTGATAGGCAAATTCTGTGTGGACT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR GCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGTCAACATTGTGCAAGTaGATGACCCTGAGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLSTLCK*MTLSVN
Trigger: ATTCACACTCAGGGTCATGCACTTGCACAATGTTGA...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTAGTCTGAATGCCCTCTaGATACAGAACAAGCATACA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSASLNAL*IQNKHT
Trigger: TGTATGCTTGTTCTGTATCCAGAGGGCATTCAGACT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATAGGCTACTGGGTTTTTaGCTAATTATCTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNRLLGF*LIISLI
Trigger: GATCAAAGAGATAATTAGCCAAAAACCCAGTAGCCT...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp ACAAGGAGGATTAGTAATTTATTCATTCACAAACTATaGCTGAATACAGAGCACGTCTGGCTGACTAGGTTT +
Preference number: 4 (lower is better)
Translates to: TRRISNLFIHKL*LNTEHVWLTRF
Trigger: AAACCTAGTCAGCCAGACGTGCTCTGTATTCAGCAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACACAAAATGTATCTGGATaGTGTAATAGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTQNVSG*CNRQHS
Trigger: ACTGTGCTGTCTATTACATCATCCAGATACATTTTG...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGAATTGCTGATGAGGTaGTTTTGGGAGATAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAELLMR*FWEISV
Trigger: AACACTTATCTCCCAAAATCACCTCATCAGCAATTC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTAATGGTCAAGTTGTCTaGTTGGGCTGGTTTATTACT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSANGQVV*LGWFIT
Trigger: AGTAATAAACCAGCCCAATCAGACAACTTGACCATT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAGTGCTGGTCTGATTTaGGGCTCTTTATCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKESAGLI*GSLSFS
Trigger: TGAAAAAGATAAAGAGCCTCAAATCAGACCAGCACT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR GCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTTTCTATCGTATGGTTaGTGTTCCATTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAFLSYG*CSIHLL
Trigger: CAGCAGATGAATGGAACAGCAACCATACGATAGAAA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR GCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAGTCCACACAGAATTTaGCTATCACTCTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKESPHRI*LSLYLS
Trigger: TGACAGATAGAGTGATAGGCAAATTCTGTGTGGACT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCTACCAAGACATCCGTaGAGTTATTTTCCACAATCA +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSALPRHP*SYFPQS
Trigger: TGATTGTGGAAAATAACTCCACGGATGTCTTGGTAG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAGGCTACTGGGTTTTTaGCTAATTATCTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTRLLGF*LIISLI
Trigger: GATCAAAGAGATAATTAGCCAAAAACCCAGTAGCCT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAAATTTTAGAGGCCAGTaGAGTTTTGTATCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKNFRGQ*SFVSSR
Trigger: CCTAGAAGATACAAAACTCCACTGGCCTCTAAAATT...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCAAAATGTATCTGGATaGTGTAATAGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAQNVSG*CNRQHS
Trigger: ACTGTGCTGTCTATTACATCATCCAGATACATTTTG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGATCACAAAGTCAATTaGTGTTTTCAAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSADHKVN*CFQANS
Trigger: GGAGTTTGCTTGAAAACATCAATTGACTTTGTGATC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTATCAATAGCTCAGTGTaGAAACATTCTTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAINSSV*KHSYLQ
Trigger: CTGCAAGTAAGAATGTTTTCACACTGAGCTATTGAT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR TCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTAGAAACAGGCATGAATaGTGCAAGTTTGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSARNRHE*CKFAEI
Trigger: AATTTCAGCAAACTTGCATCATTCATGCCTGTTTCT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAAATCACAGGGATTTCTaGTTTAGCAAAAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: SNSHTYEASICFLRTNKENHRDF*FSKNLD
Trigger: GTCAAGGTTTTTGCTAAACCAGAAATCCCTGTGATT...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR CCA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTAATCACAGGGATTTCTaGTTTAGCAAAAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: ETGMNDASLLKFYRYQSANHRDF*FSKNLD
Trigger: GTCAAGGTTTTTGCTAAACCAGAAATCCCTGTGATT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CCA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGAAAGCCCCAGGATTTTaGCAAAGAGTTTACAATGTT +
Preference number: 4 (lower is better)
Translates to: GRFQATRRISNLFIHKLLKAPGF*QRVYNV
Trigger: AACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTT...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CCA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAATTAATTAATCAGTGCTaGTCTGATTTGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKLINQC*SDLRLF
Trigger: AAAGAGCCTCAAATCAGACCAGCACTGATTAATTAA...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
3UTR CAA 72 bp GCAAGTTGGTGCTTGTTAGCAAAATACCTTAGTTCCTaGACAGGTAGATTTCTTTCTTTCTTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASWCLLAKYLSS*TGRFLSFFLSF
Trigger: GAAAGAAAGAAAGAAAGAAAGAAATCTACCTGTCAAGGAACTAAGGTATTTTGCTAACAAGCACCAACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAAGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEGDLGP*HLHEEA
Trigger: GGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACC...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEGDLGP*HLHEEA
Trigger: GGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CAA 90 bp GATCCCAGCCAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCACCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DPSQYLLNRIPAEFCHGAPIIED*DWREVE
Trigger: CTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGG...TGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTGGCTGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAACACTGGGGCTCATCTaGGAGGCTGGCCACCACAAG +
Preference number: 5 (lower is better)
Translates to: VRVVLILNIVQVHDPECETLGLI*EAGHHK
Trigger: CTTGTGGTGGCCAGCCTCCAAGATGAGCCCCAGTGT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATC +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGAYCLC*AGQVDI
Trigger: GATGTCAACCTGACCTGCCAAACACAGACAGTAGGC...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATC +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEAYCLC*AGQVDI
Trigger: GATGTCAACCTGACCTGCCAAACACAGACAGTAGGC...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEGDLGP*HLHEEA
Trigger: GGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATACACTGGGGCTCATCTaGGAGGCTGGCCACCACAAG +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYTLGLI*EAGHHK
Trigger: CTTGTGGTGGCCAGCCTCCAAGATGAGCCCCAGTGT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTGAAGTTTGGCAGGTCAGGTaGACATCAGAGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: KKDPRIRAAVFHRPCIGEVWQVR*TSEPSV
Trigger: TACACTTGGCTCTGATGTCAACCTGACCTGCCAAAC...TTCACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGCCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEPIIED*DWREVE
Trigger: CTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGG...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGTTGAGGAGTGGTGTTaGGCCTCAAGGCACTCACAT +
Preference number: 5 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHVEEWC*ASRHSH
Trigger: ATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAAC...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACACTGGAATTGCTGGGTaGAGGAGTGGTGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHTGIAG*RSGVWP
Trigger: AGGCCAAACACCACTCCTCAACCCAGCAATTCCAGT...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS TCA 90 bp CATCATTCTTTAGCATCCTACCCTCATCCCCCTGCCCAACAAGAATaGCAAGTATCCAGGGAAACAGACTCCAGCACTGTTACCCACATG +
Preference number: 5 (lower is better)
Translates to: HHSLASYPHPPAQQE*QVSRETDSSTVTHM
Trigger: CATGTGGGTAACAGTGCTGGAGTCTGTTTCCCTGGATACTTGTCATTCTTGTTGGGCAGGGGGATGAGGGTAGGATGCTAAAGAATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465428.1
CDS CCA 90 bp ACTGTGGTGGAGCTCCTCAAGATTTTGTTAGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCATCATCGAAGATTTGGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: TVVELLKILLGPTLM*QENFRPSSKIWTGE
Trigger: CTCTCCAGTCCAAATCTTCGATGATGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTCCACCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGTTTGGCAGGTCAGGTaGACATCAGAGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEVWQVR*TSEPSV
Trigger: TACACTTGGCTCTGATGTCAACCTGACCTGCCAAAC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTATCTTATTGGTGACCTaGGACCATTGCATCTGCACG +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGILLVT*DHCICT
Trigger: CGTGCAGATGCAATGGTCCAAGGTCACCAATAAGAT...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp GATCCCAGCCAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAACAGTAGAAGCCGTATaGGGGATGATAGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: DPSQYLLNRIPAEFCHGATVEAV*GMIDSN
Trigger: ATTGCTGTCTATCATCCCCAATACGGCTTCTACTGT...TGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTGGCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTC +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYAGWRR*GVKGRF
Trigger: GAATCTACCCTTGACACCCAACCTTCTCCAGCCAGC...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS TCA 90 bp AGCCGTATTGGGGATGATAGACAGCAATCAGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCTGCACGAAGAAGCCTACTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SRIGDDRQQSGLSYW*PWTIASARRSLLSV
Trigger: CACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCTGATTGCTGTCTATCATCCCCAATACGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS GCA 90 bp ACAGCAATCAGGTCTATCTTATTGGTGACCTTGGACCATTGCATCTaGACGAAGAAGCCTACTGTCTGTGTTTGGCAGGTCAGGTTGACA +
Preference number: 5 (lower is better)
Translates to: TAIRSILLVTLDHCI*TKKPTVCVWQVRLT
Trigger: TGTCAACCTGACCTGCCAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCTGATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CCA 90 bp TCTAATGTGGCAAGAGAACTTCCGCCCATCATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTAGTCTGTACCAAGCTTGACTCTATC +
Preference number: 5 (lower is better)
Translates to: SNVARELPPIIEDLD*REVESVVCTKLDSI
Trigger: GATAGAGTCAAGCTTGGTACAGACTACAGACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGGCGGAAGTTCTCTTGCCACATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS CCA 90 bp GCTCAGTGTGAAAACATTCTTACTTGCAGGAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAGGGTAGATTCTGTAACACTCAGTGG +
Preference number: 5 (lower is better)
Translates to: AQCENILTCRRYTAG*RRLGVKGRFCNTQW
Trigger: CCACTGAGTGTTACAGAATCTACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGTAAGAATGTTTTCACACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTATCAGGTCTATCTTATaGGTGACCTTGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGIRSIL*VTLDHC
Trigger: GCAATGGTCCAAGGTCACCAATAAGATAGACCTGAT...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTACAGTAGAAGCCGTATaGGGGATGATAGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGTVEAV*GMIDSN
Trigger: ATTGCTGTCTATCATCCCCAATACGGCTTCTACTGT...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGGACAGTGAAGGAGGATaGAAAATGTGGTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEDSEGG*KMWFLC
Trigger: GCACAGGAACCACATTTTCAATCCTCCTTCACTGTC...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCAGTTTGGTTCCAGTTaGATGGACATACACACGAAG +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEQFGSS*MDIHTK
Trigger: CTTCGTGTGTATGTCCATCAAACTGGAACCAAACTG...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS GCA 90 bp CTGTTAACAGAATCATCATTCTTTAGCATCCTACCCTCATCCCCCTaGCCAACAAGAATGACAAGTATCCAGGGAAACAGACTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLTESSFFSILPSSP*PTRMTSIQGNRLQH
Trigger: GTGCTGGAGTCTGTTTCCCTGGATACTTGTCATTCTTGTTGGGCAGGGGGATGAGGGTAGGATGCTAAAGAATGATGATTCTGTTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465428.1
CDS-3UTR CAA 90 bp GATCCCAGCCAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCATTTTCCCAAACTCCCTaGACAAAATGTATCTGGATG +
Preference number: 5 (lower is better)
Translates to: DPSQYLLNRIPAEFCHGAFSQTP*TKCIWM
Trigger: CATCCAGATACATTTTGTCAAGGGAGTTTGGGAAAA...TGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTGGCTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp CAATACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATG +
Preference number: 5 (lower is better)
Translates to: QYLLNRIPAEFCHGAKSHELLKI*LGPTLM
Trigger: CATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTC...GTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGTTGAGGAGTGGTGTTaGGCCTCAAGGCACTCACAT +
Preference number: 5 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTVEEWC*ASRHSH
Trigger: ATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAAC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGACTGGAATTGCTGGGTaGAGGAGTGGTGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQTGIAG*RSGVWP
Trigger: AGGCCAAACACCACTCCTCAACCCAGCAATTCCAGT...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGCATTGTCATGAAGTGTaGAGCCTGCACCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMHCHEV*SLHLTG
Trigger: CCCCGTCAGGTGCAGGCTCAACACTTCATGACAATG...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGCATTGTCATGAAGTGTaGAGCCTGCACCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERHCHEV*SLHLTG
Trigger: CCCCGTCAGGTGCAGGCTCAACACTTCATGACAATG...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCCATCTTTGGGCTTATaGACCACAATACCAGTGATA +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEPSLGL*TTIPVI
Trigger: TATCACTGGTATTGTGGTCAATAAGCCCAAAGATGG...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGCAGTTGAAACCATTGTaGTCCCTCCATCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEQLKPL*SLHQRI
Trigger: AATTCTCTGATGGAGGGACAACAATGGTTTCAACTG...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATGAGGCCAGTGGAGTTTaGTATCTTCTAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYEASGV*YLLGYW
Trigger: CCAGTAGCCTAGAAGATACAAAACTCCACTGGCCTC...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGAAGTCCACACAGAATTaGCCTATCACTCTATCTGTC +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEKSTQN*PITLSV
Trigger: GACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TACCTTCTCAATAGGATTCCAGCAGAGTTCTGCCATGGGGCAAAGTCTCACGAGATCCGTGAAAATTTTTaGGTATCTGTCCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: YLLNRIPAEFCHGAKSHEIRENF*VSVPLE
Trigger: CTCCAGTGGGACAGATACCAAAAAATTTTCACGGAT...CTCGTGAGACTTTGCCCCATGGCAGAACTCTGCTGGAATCCTATTGAGAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTTTTTCCCAAACTCCCTaGACAAAATGTATCTGGATG +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGFSQTP*TKCIWM
Trigger: CATCCAGATACATTTTGTCAAGGGAGTTTGGGAAAA...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATC +
Preference number: 5 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMAYCLC*AGQVDI
Trigger: GATGTCAACCTGACCTGCCAAACACAGACAGTAGGC...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AGAAAGAAGGACCCAAGAATCCGTGCTGCTGTTTTCCACCGACCATGCATAGGTATTTCTATCGTATGGTaGCTGTTCCATTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: RKKDPRIRAAVFHRPCIGISIVW*LFHSSA
Trigger: AGCAGATGAATGGAACAGCAACCATACGATAGAAAT...ACCTATGCATGGTCGGTGGAAAACAGCAGCACGGATTCTTGGGTCCTTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488054.1
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTCCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTPIIED*DWREVE
Trigger: CTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGG...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGGTTTAGCAAAAACCTaGACTGTGGTGGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQGLAKT*TVVELL
Trigger: GAGGAGCTCCACCACAGTCAAGGTTTTTGCTAAACC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTC +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNAGWRR*GVKGRF
Trigger: GAATCTACCCTTGACACCCAACCTTCTCCAGCCAGC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTC +
Preference number: 5 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFAGWRR*GVKGRF
Trigger: GAATCTACCCTTGACACCCAACCTTCTCCAGCCAGC...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAACGTGAAACTGATTTTTaGGTATCTGTCCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: VRVVLILNIVQVHDPECERETDF*VSVPLE
Trigger: CTCCAGTGGGACAGATACCAAAAAATCAGTTTCACG...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATCATTGTCATGAAGTGTaGAGCCTGCACCTGACGGGG +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNHCHEV*SLHLTG
Trigger: CCCCGTCAGGTGCAGGCTCAACACTTCATGACAATG...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATGTTTTCGTAGATCCATaGGCAGTTGTGGGGACTTCT +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYVFVDP*AVVGTS
Trigger: AGAAGTCCCCACAACTGCCAATGGATCTACGAAAAC...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGACTTTCGTTGGGCTCTaGAATGCAAGTGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPETFVGL*NASVLD
Trigger: ATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGATACTTCTCCATTACTaGGCAGCCTTGTTAGCACTT +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEILLHY*AALLAL
Trigger: AAGTGCTAACAAGGCTGCCAAGTAATGGAGAAGTAT...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGGCTAATTATCTCTTaGATCCCTCTTCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEWLIIS*IPLHPG
Trigger: ACCAGGATGAAGAGGGATCAAAGAGATAATTAGCCA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS TCA 90 bp GAATGCCCTCTGGATACAGAACAAGCATACACTCGTACCTTCCACTaGCTGAACAAGACATATTCCTTAAGTGCAGAGTCCATTTTGACC +
Preference number: 5 (lower is better)
Translates to: ECPLDTEQAYTRTFH*LNKTYSLSAESILT
Trigger: GGTCAAAATGGACTCTGCACTTAAGGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGTGTATGCTTGTTCTGTATCCAGAGGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS TCA 90 bp GACGTGATTAGTTTTCGTAGATCCATTGGCAGTTGTGGGGACTTCTaGAAATGCTCTGGCTGTGCTGGTAAAGACATTGTCATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: DVISFRRSIGSCGDF*KCSGCAGKDIVMKC
Trigger: ACACTTCATGACAATGTCTTTACCAGCACAGCCAGAGCATTTTCAGAAGTCCCCACAACTGCCAATGGATCTACGAAAACTAATCACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS GCA 90 bp ATCTGCTTGGTTAAATCAATAGCTCAGTGTGAAAACATTCTTACTTaGAGGAGATACACTGCTGGCTGGAGAAGGTTGGGTGTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: ICLVKSIAQCENILT*RRYTAGWRRLGVKG
Trigger: ACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGTAAGAATGTTTTCACACTGAGCTATTGATTTAACCAAGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS CCA 90 bp TCCACACTTTATTTCCTGGGACTGGAGACAGAGCCATACACCAAATaGTCAAGTTGTCTGATTGGGCTGGTTTATTACTATGTACCCTTG +
Preference number: 5 (lower is better)
Translates to: STLYFLGLETEPYTK*SSCLIGLVYYYVPL
Trigger: CAAGGGTACATAGTAATAAACCAGCCCAATCAGACAACTTGACCATTTGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAAAGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS CCA 90 bp ACTTTCGTTGGGCTCTTGAATGCAAGTGTACTTGATGGGAGGTGGTaGTGGCTTGAAAGGTGGAGGTCTTTCCATTATTTCTTTTTGGTA +
Preference number: 5 (lower is better)
Translates to: TFVGLLNASVLDGRW*WLERWRSFHYFFLV
Trigger: TACCAAAAAGAAATAATGGAAAGACCTCCACCTTTCAAGCCACCACCACCTCCCATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CCA 90 bp ATCACTTTCGTTGGGCTCTTGAATGCAAGTGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGGAGGTCTTTCCATTATTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ITFVGLLNASVLDGR*WWLERWRSFHYFFL
Trigger: CAAAAAGAAATAATGGAAAGACCTCCACCTTTCAAGCCACCACCACCTCCCATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTTTTCCCAAACTCCCTaGACAAAATGTATCTGGATG +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEFSQTP*TKCIWM
Trigger: CATCCAGATACATTTTGTCAAGGGAGTTTGGGAAAA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGGTTTGGCAGGTCAGGTaGACATCAGAGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMVWQVR*TSEPSV
Trigger: TACACTTGGCTCTGATGTCAACCTGACCTGCCAAAC...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCGTTTGGCAGGTCAGGTaGACATCAGAGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFVWQVR*TSEPSV
Trigger: TACACTTGGCTCTGATGTCAACCTGACCTGCCAAAC...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTGDLGP*HLHEEA
Trigger: GGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACC...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATGCTGATGAGGTGATTTaGGGAGATAAGTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYADEVI*GDKCFL
Trigger: CAGGAAACACTTATCTCCCAAAATCACCTCATCAGC...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGTTGAGGAGTGGTGTTaGGCCTCAAGGCACTCACAT +
Preference number: 5 (lower is better)
Translates to: KSTQNLPITLSVNNICFSVEEWC*ASRHSH
Trigger: ATGTGAGTGCCTTGAGGCCAAACACCACTCCTCAAC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAACTGGAATTGCTGGGTaGAGGAGTGGTGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: FESVDACVSLLRHSDLIETGIAG*RSGVWP
Trigger: AGGCCAAACACCACTCCTCAACCCAGCAATTCCAGT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGCCACTACGAATTGCATaGAGTGTGAACATGACATAT +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEPLRIA*SVNMTY
Trigger: ATATGTCATGTTCACACTCAATGCAATTCGTAGTGG...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CCAATGGTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTTCATTCACAAACTATaGCTGAATACAGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: PMVRVVLILNIVQVHDPEFIHKL*LNTEHV
Trigger: GACGTGCTCTGTATTCAGCAATAGTTTGTGAATGAA...CTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCACCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS CCA 90 bp GGGACTGGAGACAGAGCCATACACCAAATGGTCAAGTTGTCTGATTaGGCTGGTTTATTACTATGTACCCTTGTTAAAACAGACTTCAGT +
Preference number: 5 (lower is better)
Translates to: GTGDRAIHQMVKLSD*AGLLLCTLVKTDFS
Trigger: ACTGAAGTCTGTTTTAACAAGGGTACATAGTAATAAACCAGCCCAATCAGACAACTTGACCATTTGGTGTATGGCTCTGTCTCCAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAGDLGP*HLHEEA
Trigger: GGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GTGAGAGTGGTACTCATTCTCAACATTGTGCAAGTGCATGACCCTGAGTGTGAAATTTCTATCGTATGGTaGCTGTTCCATTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: VRVVLILNIVQVHDPECEISIVW*LFHSSA
Trigger: AGCAGATGAATGGAACAGCAACCATACGATAGAAAT...TTCACACTCAGGGTCATGCACTTGCACAATGTTGAGAATGAGTACCACTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGGCTGATGAGGTGATTTaGGGAGATAAGTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQADEVI*GDKCFL
Trigger: CAGGAAACACTTATCTCCCAAAATCACCTCATCAGC...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTGGTTTAGCAAAAACCTaGACTGTGGTGGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: KAFSCAVKDKHTASELKFGLAKT*TVVELL
Trigger: GAGGAGCTCCACCACAGTCAAGGTTTTTGCTAAACC...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGGGTTTAGCAAAAACCTaGACTGTGGTGGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWGLAKT*TVVELL
Trigger: GAGGAGCTCCACCACAGTCAAGGTTTTTGCTAAACC...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTC +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAAGWRR*GVKGRF
Trigger: GAATCTACCCTTGACACCCAACCTTCTCCAGCCAGC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCGTGAAACTGATTTTTaGGTATCTGTCCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQRETDF*VSVPLE
Trigger: CTCCAGTGGGACAGATACCAAAAAATCAGTTTCACG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTGTTTTCGTAGATCCATaGGCAGTTGTGGGGACTTCT +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTVFVDP*AVVGTS
Trigger: AGAAGTCCCCACAACTGCCAATGGATCTACGAAAAC...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTTTTCGTAGATCCATaGGCAGTTGTGGGGACTTCT +
Preference number: 5 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERVFVDP*AVVGTS
Trigger: AGAAGTCCCCACAACTGCCAATGGATCTACGAAAAC...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATTTAAGCTTCAGGCGTTaGGAGATGGAAGAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNLSFRR*EMEEGE
Trigger: CTCACCCTCTTCCATCTCCAAACGCCTGAAGCTTAA...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATATACAGTTGAAACCATaGTTGTCCCTCCATCAGAGA +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYIQLKP*LSLHQR
Trigger: TCTCTGATGGAGGGACAACAATGGTTTCAACTGTAT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TGCATTGATTGCCTCCCCTTAATCCTGGCCTCAGGTTACACAAATCATCTGTATATACTTCTCCATTACTaGGCAGCCTTGTTAGCACTT +
Preference number: 5 (lower is better)
Translates to: CIDCLPLILASGYTNHLYILLHY*AALLAL
Trigger: AAGTGCTAACAAGGCTGCCAAGTAATGGAGAAGTAT...ATACAGATGATTTGTGTAACCTGAGGCCAGGATTAAGGGGAGGCAATCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAGAGGCCAGTGGAGTTTaGTATCTTCTAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: FESVDACVSLLRHSDLIEEASGV*YLLGYW
Trigger: CCAGTAGCCTAGAAGATACAAAACTCCACTGGCCTC...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTTTGCTCTGGAGTTTaGGGAAAATCAAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERVCSGV*GKSKGS
Trigger: GGAGCCCTTTGATTTTCCCAAAACTCCAGAGCAAAC...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS GCA 90 bp ATACACTCGTACCTTCCACTGACTGAACAAGACATATTCCTTAAGTaGAGAGTCCATTTTGACCCATTCTCAGGAGTTTCTGTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: IHSYLPLTEQDIFLK*RVHFDPFSGVSVKV
Trigger: GACTTTCACAGAAACTCCTGAGAATGGGTCAAAATGGACTCTGCACTTAAGGAATATGTCTTGTTCAGTCAGTGGAAGGTACGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS-3UTR CAA 90 bp AGCAACAGCCATACATATGAAGCTAGCATTTGTTTCTTGAGAACTAATAAGGAAGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATC +
Preference number: 5 (lower is better)
Translates to: SNSHTYEASICFLRTNKEAYCLC*AGQVDI
Trigger: GATGTCAACCTGACCTGCCAAACACAGACAGTAGGC...TTCCTTATTAGTTCTCAAGAAACAAATGCTAGCTTCATATGTATGGCTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATC +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAAYCLC*AGQVDI
Trigger: GATGTCAACCTGACCTGCCAAACACAGACAGTAGGC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp TTTGAGAGTGTTGATGCCTGTGTCTCACTCCTCAGACATTCTGATTTAATTGAAATCTTATTGGTGACCTaGGACCATTGCATCTGCACG +
Preference number: 5 (lower is better)
Translates to: FESVDACVSLLRHSDLIEILLVT*DHCICT
Trigger: CGTGCAGATGCAATGGTCCAAGGTCACCAATAAGAT...TTCAATTAAATCAGAATGTCTGAGGAGTGAGACACAGGCATCAACACTCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGATCTTATTGGTGACCTaGGACCATTGCATCTGCACG +
Preference number: 5 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWILLVT*DHCICT
Trigger: CGTGCAGATGCAATGGTCCAAGGTCACCAATAAGAT...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp CTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGATCAGGTCTATCTTATaGGTGACCTTGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: LEKHSLVFFDMKWFNGERIRSIL*VTLDHC
Trigger: GCAATGGTCCAAGGTCACCAATAAGATAGACCTGAT...CCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTCCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAPIIED*DWREVE
Trigger: CTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGG...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTCCATCTTTGGGCTTATaGACCACAATACCAGTGATA +
Preference number: 5 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTPSLGL*TTIPVI
Trigger: TATCACTGGTATTGTGGTCAATAAGCCCAAAGATGG...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCCATCTTTGGGCTTATaGACCACAATACCAGTGATA +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQPSLGL*TTIPVI
Trigger: TATCACTGGTATTGTGGTCAATAAGCCCAAAGATGG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCAGGACATTCCATCTTaGGGCTTATTGACCACAATA +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQQDIPS*GLLTTI
Trigger: TATTGTGGTCAATAAGCCCAAAGATGGAATGTCCTG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTCAGTTGAAACCATTGTaGTCCCTCCATCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTQLKPL*SLHQRI
Trigger: AATTCTCTGATGGAGGGACAACAATGGTTTCAACTG...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAAGAGTTAAGCACCTACCTAAGATTCTGAGCCATGAGAAAGAACTTCCACAGCAAAGCCCCAGGATTTaGGCAAAGAGTTTACAATGT +
Preference number: 5 (lower is better)
Translates to: TRVKHLPKILSHEKELPQQSPRI*AKSLQC
Trigger: ACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTG...CTGTGGAAGTTCTTTCTCATGGCTCAGAATCTTAGGTAGGTGCTTAACTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GGCTTTTCCCAGTGTCAGTATGGTCAAAGAGAGATCAAAGAAGAAGCCACAGTGCATTACTTGGCAGCCTaGTTAGCACTTTTACATTTT +
Preference number: 5 (lower is better)
Translates to: GFSQCQYGQREIKEEATVHYLAA*LALLHF
Trigger: AAAATGTAAAAGTGCTAACAAGGCTGCCAAGTAATG...CACTGTGGCTTCTTCTTTGATCTCTCTTTGACCATACTGACACTGGGAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTCAGTTTGGTTCCAGTTaGATGGACATACACACGAAG +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTQFGSS*MDIHTK
Trigger: CTTCGTGTGTATGTCCATCAAACTGGAACCAAACTG...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTCCAAATAACTCTGCACAAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGAACATGTGAATCATTaGAGAGTGTTGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LQITLHKAFSCAVKDKHTEHVNH*RVLMPV
Trigger: CACAGGCATCAACACTCTCAAATGATTCACATGTTC...AGTATGCTTATCCTTGACTGCACATGAGAATGCCTTGTGCAGAGTTATTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp CTTGGGTGGAGTCTGGAGAAACACAGCTTAGTTTTCTTTGATATGAAATGGTTCATGAAAGTCTCTTTCTaGGGTGGAGTCTGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: LGWSLEKHSLVFFDMKWFMKVSF*GGVWRN
Trigger: GTTTCTCCAGACTCCACCCAAGAAAGAGACTTTCAT...GAACCATTTCATATCAAAGAAAACTAAGCTGTGTTTCTCCAGACTCCACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGTTTGGCAGGTCAGGTaGACATCAGAGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAVWQVR*TSEPSV
Trigger: TACACTTGGCTCTGATGTCAACCTGACCTGCCAAAC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAATCTTATTGGTGACCTaGGACCATTGCATCTGCACG +
Preference number: 5 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTILLVT*DHCICT
Trigger: CGTGCAGATGCAATGGTCCAAGGTCACCAATAAGAT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAGTTTTGCTGATGAGGTGATTTaGGGAGATAAGTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: FFDMKWFNGERVSLLWSFADEVI*GDKCFL
Trigger: CAGGAAACACTTATCTCCCAAAATCACCTCATCAGC...AAAACTCCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATG +
Preference number: 5 (lower is better)
Translates to: KSTQNLPITLSVNNICFSELLKI*LGPTLM
Trigger: CATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGGTTTAGCAAAAACCTaGACTGTGGTGGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAGLAKT*TVVELL
Trigger: GAGGAGCTCCACCACAGTCAAGGTTTTTGCTAAACC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATTCAGTGGAGGGTCTGTaGAGGAAATTTCAGAACCTA +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNSVEGL*RKFQNL
Trigger: TAGGTTCTGAAATTTCCTCAACAGACCCTCCACTGA...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCATCAGTGGAGGGTCTGTaGAGGAAATTTCAGAACCTA +
Preference number: 5 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPSVEGL*RKFQNL
Trigger: TAGGTTCTGAAATTTCCTCAACAGACCCTCCACTGA...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTCAGGACATTCCATCTTaGGGCTTATTGACCACAATA +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTQDIPS*GLLTTI
Trigger: TATTGTGGTCAATAAGCCCAAAGATGGAATGTCCTG...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCATATCCTCTCACTCTaGGTTAAGCTTCAGGCGTTT +
Preference number: 5 (lower is better)
Translates to: KSTQNLPITLSVNNICFSHILSL*VKLQAF
Trigger: AAACGCCTGAAGCTTAACCAAGAGTGAGAGGATATG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGCAAAGCCCCAGGATTTaGGCAAAGAGTTTACAATGT +
Preference number: 5 (lower is better)
Translates to: IILGNAAKPQDFGKEFTMQSPRI*AKSLQC
Trigger: ACATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTG...CATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAGACAGTGAAGGAGGATaGAAAATGTGGTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKDSEGG*KMWFLC
Trigger: GCACAGGAACCACATTTTCAATCCTCCTTCACTGTC...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCGTAGTTCTGGCTCTCTaGAGGTCTTGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: KSTQNLPITLSVNNICFSVVLAL*RSWSKD
Trigger: ATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTAC...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTTTTTCCCAAACTCCCTaGACAAAATGTATCTGGATG +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTFSQTP*TKCIWM
Trigger: CATCCAGATACATTTTGTCAAGGGAGTTTGGGAAAA...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTATCTTATTGGTGACCTaGGACCATTGCATCTGCACG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAILLVT*DHCICT
Trigger: CGTGCAGATGCAATGGTCCAAGGTCACCAATAAGAT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAATCAGGTCTATCTTATaGGTGACCTTGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTIRSIL*VTLDHC
Trigger: GCAATGGTCCAAGGTCACCAATAAGATAGACCTGAT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAACAGTAGAAGCCGTATaGGGGATGATAGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKTVEAV*GMIDSN
Trigger: ATTGCTGTCTATCATCCCCAATACGGCTTCTACTGT...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATG +
Preference number: 5 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKELLKI*LGPTLM
Trigger: CATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTC...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGCAGGACATTCCATCTTaGGGCTTATTGACCACAATA +
Preference number: 5 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWQDIPS*GLLTTI
Trigger: TATTGTGGTCAATAAGCCCAAAGATGGAATGTCCTG...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTACTTTCGTTGGGCTCTaGAATGCAAGTGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: KAFSCAVKDKHTASELKFTFVGL*NASVLD
Trigger: ATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGT...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCAACTTTCGTTGGGCTCTaGAATGCAAGTGTACTTGAT +
Preference number: 5 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPTFVGL*NASVLD
Trigger: ATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGT...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GCAAGAAAACCACTACGAATTGCATTGAGTGTGAACATGACATATCCTCTCACTCCACTACGAATTGCATaGAGTGTGAACATGACATAT +
Preference number: 5 (lower is better)
Translates to: ARKPLRIALSVNMTYPLTPLRIA*SVNMTY
Trigger: ATATGTCATGTTCACACTCAATGCAATTCGTAGTGG...AGTGAGAGGATATGTCATGTTCACACTCAATGCAATTCGTAGTGGTTTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATATACAGTTGAAACCATaGTTGTCCCTCCATCAGAGA +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNIQLKP*LSLHQR
Trigger: TCTCTGATGGAGGGACAACAATGGTTTCAACTGTAT...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTTGGCTAATTATCTCTTaGATCCCTCTTCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: KAFSCAVKDKHTASELKFWLIIS*IPLHPG
Trigger: ACCAGGATGAAGAGGGATCAAAGAGATAATTAGCCA...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGGCATTCTCATGTGCAGTCAAGGATAAGCATACTGCAAGTGAACTAAAGTTTCAGTGCTGGTCTGATTaGAGGCTCTTTATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KAFSCAVKDKHTASELKFQCWSD*RLFIFF
Trigger: GAAAAAGATAAAGAGCCTCAAATCAGACCAGCACTG...AAACTTTAGTTCACTTGCAGTATGCTTATCCTTGACTGCACATGAGAATGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AAGTCCACACAGAATTTGCCTATCACTCTATCTGTCAACAACATCTGTTTTTCCCAGTGCTGGTCTGATTaGAGGCTCTTTATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KSTQNLPITLSVNNICFSQCWSD*RLFIFF
Trigger: GAAAAAGATAAAGAGCCTCAAATCAGACCAGCACTG...GGAAAAACAGATGTTGTTGACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AATTATCTTAGGGAATGCAGCAAAGCCCCAGGATTTTGGCAAAGAGTTTACAATGAACATGTGAATCATTaGAGAGTGTTGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: NYLRECSKAPGFWQRVYNEHVNH*RVLMPV
Trigger: CACAGGCATCAACACTCTCAAATGATTCACATGTTC...ATTGTAAACTCTTTGCCAAAATCCTGGGGCTTTGCTGCATTCCCTAAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACATACTCATTCTCAACATaGTGCAAGTGCATGACCCTG +
Preference number: 5 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTYSFST*CKCMTL
Trigger: CAGGGTCATGCACTTGCACAATGTTGAGAATGAGTA...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAATACTCATTCTCAACATaGTGCAAGTGCATGACCCTG +
Preference number: 5 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKYSFST*CKCMTL
Trigger: CAGGGTCATGCACTTGCACAATGTTGAGAATGAGTA...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTATCAGGTCTATCTTATaGGTGACCTTGGACCATTGC +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAIRSIL*VTLDHC
Trigger: GCAATGGTCCAAGGTCACCAATAAGATAGACCTGAT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGACAGTAGAAGCCGTATaGGGGATGATAGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: GRFQATRRISNLFIHKLLTVEAV*GMIDSN
Trigger: ATTGCTGTCTATCATCCCCAATACGGCTTCTACTGT...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTACAGTAGAAGCCGTATaGGGGATGATAGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSATVEAV*GMIDSN
Trigger: ATTGCTGTCTATCATCCCCAATACGGCTTCTACTGT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AAATTGATTGAAGTTTTGGTGGATCCCAGCCAATACCTTCTCAATAGGATTCCAATTTCTATCGTATGGTaGCTGTTCCATTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: KLIEVLVDPSQYLLNRIPISIVW*LFHSSA
Trigger: AGCAGATGAATGGAACAGCAACCATACGATAGAAAT...TGGAATCCTATTGAGAAGGTATTGGCTGGGATCCACCAAAACTTCAATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGCTGATGAGGTGATTTaGGGAGATAAGTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAADEVI*GDKCFL
Trigger: CAGGAAACACTTATCTCCCAAAATCACCTCATCAGC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAELLKI*LGPTLM
Trigger: CATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGTCAGTGGAGGGTCTGTaGAGGAAATTTCAGAACCTA +
Preference number: 5 (lower is better)
Translates to: GRFQATRRISNLFIHKLLSVEGL*RKFQNL
Trigger: TAGGTTCTGAAATTTCCTCAACAGACCCTCCACTGA...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTCAGTGGAGGGTCTGTaGAGGAAATTTCAGAACCTA +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSASVEGL*RKFQNL
Trigger: TAGGTTCTGAAATTTCCTCAACAGACCCTCCACTGA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp AGAGTTTACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAAAGTCCACACAGAATTaGCCTATCACTCTATCTGTC +
Preference number: 5 (lower is better)
Translates to: RVYNVDRCSNKRIRHGHTKSTQN*PITLSV
Trigger: GACAGATAGAGTGATAGGCAAATTCTGTGTGGACTT...TGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGTAAACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGGTAGTTCTGGCTCTCTaGAGGTCTTGGTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: GRFQATRRISNLFIHKLLVVLAL*RSWSKD
Trigger: ATCTTTTGACCAAGACCTCAAGAGAGCCAGAACTAC...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp TTAGTTTTCTTTGATATGAAATGGTTCAACGGTGAGAGGGTAAGTTTGCTCTGGAAATTGATTGAAGTTTaGGTGGATCCCAGCCAATAC +
Preference number: 5 (lower is better)
Translates to: LVFFDMKWFNGERVSLLWKLIEV*VDPSQY
Trigger: GTATTGGCTGGGATCCACCAAAACTTCAATCAATTT...CCAGAGCAAACTTACCCTCTCACCGTTGAACCATTTCATATCAAAGAAAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494798.1
CDS-3UTR CAA 90 bp ACAATGTTGATAGATGTTCAAATAAGAGGATCAGGCATGGGCATACAGTTGAAAATTTCTATCGTATGGTaGCTGTTCCATTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: TMLIDVQIRGSGMGIQLKISIVW*LFHSSA
Trigger: AGCAGATGAATGGAACAGCAACCATACGATAGAAAT...TTTCAACTGTATGCCCATGCCTGATCCTCTTATTTGAACATCTATCAACATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTTTTCCCAAACTCCCTaGACAAAATGTATCTGGATG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAFSQTP*TKCIWM
Trigger: CATCCAGATACATTTTGTCAAGGGAGTTTGGGAAAA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTATTTCTATCGTATGGTaGCTGTTCCATTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAISIVW*LFHSSA
Trigger: AGCAGATGAATGGAACAGCAACCATACGATAGAAAT...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GGAAGGTTTCAAGCGACAAGGAGGATTAGTAATTTATTCATTCACAAACTATTGTTCATTCACAAACTATaGCTGAATACAGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: GRFQATRRISNLFIHKLLFIHKL*LNTEHV
Trigger: GACGTGCTCTGTATTCAGCAATAGTTTGTGAATGAA...CAATAGTTTGTGAATGAATAAATTACTAATCCTCCTTGTCGCTTGAAACCTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283285.10
ENST00000352690.9
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTTCGTTATCAATCTGCTaGGTTAAATCAATAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSASLSIC*VKSIAQ
Trigger: CTGAGCTATTGATTTAACCAAGCAGATTGATAACGA...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS-3UTR CAA 90 bp GAAACAGGCATGAATGATGCAAGTTTGCTGAAATTTTATCGTTATCAATCTGCTGAAAATGTTCTGAAATaGGCTGTAGTCATGGTTGTA +
Preference number: 5 (lower is better)
Translates to: ETGMNDASLLKFYRYQSAENVLK*AVVMVV
Trigger: TACAACCATGACTACAGCCAATTTCAGAACATTTTC...AGCAGATTGATAACGATAAAATTTCAGCAAACTTGCATCATTCATGCCTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS CCA 72 bp TCCAGGGAAACAGACTCCAGCACTGTTACCCACATGTaGCTGCTCTGCAGCATAATAGGGTGCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SRETDSSTVTHM*LLCSIIGCFLF
Trigger: GAAGAGGAAGCACCCTATTATGCTGCAGAGCAGCCACATGTGGGTAACAGTGCTGGAGTCTGTTTCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465428.1
CDS CAA 90 bp ACCGACTCTAATGTGGCAAGAGAACTTCCGCCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAGTCTGTAGTCTGTACCAAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: TDSNVARELPPIIED*DWREVESVVCTKLD
Trigger: GTCAAGCTTGGTACAGACTACAGACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS CAA 90 bp GAGGGTCTCCATCTCATGATAAGGCAGATCACTTTCGTTGGGCTCTaGAATGCAAGTGTACTTGATGGGAGGTGGTGGTGGCTTGAAAGG +
Preference number: 6 (lower is better)
Translates to: EGLHLMIRQITFVGL*NASVLDGRWWWLER
Trigger: CCTTTCAAGCCACCACCACCTCCCATCAAGTACACTTGCATTCAAGAGCCCAACGAAAGTGATCTGCCTTATCATGAGATGGAGACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CCA 72 bp CATTGCATCTGCACGAAGAAGCCTACTGTCTGTGTTTaGCAGGTCAGGTTGACATCAGAGCCAAGTGTAGCA +
Preference number: 6 (lower is better)
Translates to: HCICTKKPTVCV*QVRLTSEPSVA
Trigger: TGCTACACTTGGCTCTGATGTCAACCTGACCTGCCAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CCA 72 bp GCAAGAGAACTTCCGCCCATCATCGAAGATTTGGACTaGAGAGAGGTGGAGTCTGTAGTCTGTACCAAGCTT +
Preference number: 6 (lower is better)
Translates to: ARELPPIIEDLD*REVESVVCTKL
Trigger: AAGCTTGGTACAGACTACAGACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGGCGGAAGTTCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS CAA 72 bp AATGTGGCAAGAGAACTTCCGCCCATCATCGAAGATTaGGACTGGAGAGAGGTGGAGTCTGTAGTCTGTACC +
Preference number: 6 (lower is better)
Translates to: NVARELPPIIED*DWREVESVVCT
Trigger: GGTACAGACTACAGACTCCACCTCTCTCCAGTCCAAATCTTCGATGATGGGCGGAAGTTCTCTTGCCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS CAA 72 bp CTTACTTGCAGGAGATACACTGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTCTGTAACACTCAGTGG +
Preference number: 6 (lower is better)
Translates to: LTCRRYTAGWRR*GVKGRFCNTQW
Trigger: CCACTGAGTGTTACAGAATCTACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS GCA 72 bp AGGTCTATCTTATTGGTGACCTTGGACCATTGCATCTaGACGAAGAAGCCTACTGTCTGTGTTTGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: RSILLVTLDHCI*TKKPTVCVWQV
Trigger: GACCTGCCAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CCA 72 bp TGTAGCTGGATATCTTGCAGGAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAGGGTAGATTCTGTAAC +
Preference number: 6 (lower is better)
Translates to: CSWISCRRYTAG*RRLGVKGRFCN
Trigger: GTTACAGAATCTACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGATATCCAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CCA 72 bp GTTGGGCTCTTGAATGCAAGTGTACTTGATGGGAGGTaGTGGTGGCTTGAAAGGTGGAGGTCTTTCCATTAT +
Preference number: 6 (lower is better)
Translates to: VGLLNASVLDGR*WWLERWRSFHY
Trigger: ATAATGGAAAGACCTCCACCTTTCAAGCCACCACCACCTCCCATCAAGTACACTTGCATTCAAGAGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CAA 72 bp ATATCTTGCAGGAGATACACTGCTGGCTGGAGAAGGTaGGGTGTCAAGGGTAGATTCTGTAACACTCAGTGG +
Preference number: 6 (lower is better)
Translates to: ISCRRYTAGWRR*GVKGRFCNTQW
Trigger: CCACTGAGTGTTACAGAATCTACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CAA 90 bp GACCTTGGACCATTGCATCTGCACGAAGAAGCCTACTGTCTGTGTTaGGCAGGTCAGGTTGACATCAGAGCCAAGTGTAGCATAAACATT +
Preference number: 6 (lower is better)
Translates to: DLGPLHLHEEAYCLC*AGQVDIRAKCSINI
Trigger: AATGTTTATGCTACACTTGGCTCTGATGTCAACCTGACCTGCCAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CAA 90 bp AAGCCCTTACCAAAAACCTTGACTGTGGTGGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATGTGGCAAGAGAACTTCCGCCCATCA +
Preference number: 6 (lower is better)
Translates to: KPLPKTLTVVELLKI*LGPTLMWQENFRPS
Trigger: TGATGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTCCACCACAGTCAAGGTTTTTGGTAAGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465428.1
CDS CAA 90 bp ATGATAGACAGCAATCAGGTCTATCTTATTGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCCTACTGTCTGTGTTTGGCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: MIDSNQVYLIGDLGP*HLHEEAYCLCLAGQ
Trigger: CTGACCTGCCAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCTGATTGCTGTCTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CAA 90 bp TCTGGTTTAGCAAAAACCTTGACTGTGGTGGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATGTGGCAAGAGAACTTCCGCCCATCA +
Preference number: 6 (lower is better)
Translates to: SGLAKTLTVVELLKI*LGPTLMWQENFRPS
Trigger: TGATGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTCCACCACAGTCAAGGTTTTTGCTAAACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS TCA 72 bp GGGGATGATAGACAGCAATCAGGTCTATCTTATTGGTaGCCTTGGACCATTGCATCTGCACGAAGAAGCCTA +
Preference number: 6 (lower is better)
Translates to: GDDRQQSGLSYW*PWTIASARRSL
Trigger: TAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCTGATTGCTGTCTATCATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CCA 72 bp GAGCTCCTCAAGATTTTGTTAGGACCGACTCTAATGTaGCAAGAGAACTTCCGCCCATCATCGAAGATTTGG +
Preference number: 6 (lower is better)
Translates to: ELLKILLGPTLM*QENFRPSSKIW
Trigger: CCAAATCTTCGATGATGGGCGGAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000465428.1
ENST00000494798.1
CDS CAA 72 bp CTCACAGGGTCTCCCATAGGCACAGTAGAAGCCGTATaGGGGATGATAGACAGCAATCAGGTCTATCTTATT +
Preference number: 6 (lower is better)
Translates to: LTGSPIGTVEAV*GMIDSNQVYLI
Trigger: AATAAGATAGACCTGATTGCTGTCTATCATCCCCAATACGGCTTCTACTGTGCCTATGGGAGACCCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS TCA 72 bp AGTTTTCGTAGATCCATTGGCAGTTGTGGGGACTTCTaGAAATGCTCTGGCTGTGCTGGTAAAGACATTGTC +
Preference number: 6 (lower is better)
Translates to: SFRRSIGSCGDF*KCSGCAGKDIV
Trigger: GACAATGTCTTTACCAGCACAGCCAGAGCATTTTCAGAAGTCCCCACAACTGCCAATGGATCTACGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CCA 72 bp GAAAACATTCTTACTTGCAGGAGATACACTGCTGGCTaGAGAAGGTTGGGTGTCAAGGGTAGATTCTGTAAC +
Preference number: 6 (lower is better)
Translates to: ENILTCRRYTAG*RRLGVKGRFCN
Trigger: GTTACAGAATCTACCCTTGACACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGTAAGAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS CAA 72 bp AGCAATCAGGTCTATCTTATTGGTGACCTTGGACCATaGCATCTGCACGAAGAAGCCTACTGTCTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: SNQVYLIGDLGP*HLHEEAYCLCL
Trigger: CAAACACAGACAGTAGGCTTCTTCGTGCAGATGCAATGGTCCAAGGTCACCAATAAGATAGACCTGATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000488054.1
ENST00000494798.1
CDS CAA 72 bp GCAAAAACCTTGACTGTGGTGGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATGTGGCAAGAGAACTTC +
Preference number: 6 (lower is better)
Translates to: AKTLTVVELLKI*LGPTLMWQENF
Trigger: GAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTCCACCACAGTCAAGGTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS CAA 72 bp GGGACTGGAGACAGAGCCATACACCAAATGGTCAAGTaGTCTGATTGGGCTGGTTTATTACTATGTACCCTT +
Preference number: 6 (lower is better)
Translates to: GTGDRAIHQMVK*SDWAGLLLCTL
Trigger: AAGGGTACATAGTAATAAACCAGCCCAATCAGACAACTTGACCATTTGGTGTATGGCTCTGTCTCCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS CAA 72 bp CCAAAAACCTTGACTGTGGTGGAGCTCCTCAAGATTTaGTTAGGACCGACTCTAATGTGGCAAGAGAACTTC +
Preference number: 6 (lower is better)
Translates to: PKTLTVVELLKI*LGPTLMWQENF
Trigger: GAAGTTCTCTTGCCACATTAGAGTCGGTCCTAACAAAATCTTGAGGAGCTCCACCACAGTCAAGGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465428.1
CDS TCA 72 bp TTGGGCTTATTGACCACAATACCAGTGATATGGACGTaGTTAGTTTTCGTAGATCCATTGGCAGTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: LGLLTTIPVIWT*LVFVDPLAVVG
Trigger: CCCCACAACTGCCAATGGATCTACGAAAACTAATCACGTCCATATCACTGGTATTGTGGTCAATAAGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS CCA 72 bp AGTGTACTTGATGGGAGGTGGTGGTGGCTTGAAAGGTaGAGGTCTTTCCATTATTTCTTTTTGGTACTGACA +
Preference number: 6 (lower is better)
Translates to: SVLDGRWWWLER*RSFHYFFLVLT
Trigger: TGTCAGTACCAAAAAGAAATAATGGAAAGACCTCCACCTTTCAAGCCACCACCACCTCCCATCAAGTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000494798.1
CDS GCA 72 bp GTTAAATCAATAGCTCAGTGTGAAAACATTCTTACTTaGAGGAGATACACTGCTGGCTGGAGAAGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: VKSIAQCENILT*RRYTAGWRRLG
Trigger: ACCCAACCTTCTCCAGCCAGCAGTGTATCTCCTGCAAGTAAGAATGTTTTCACACTGAGCTATTGATTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438817.6
CDS CCA 72 bp AATGAGAAGGTTGTAGATTTTAGTCTGAATGCCCTCTaGATACAGAACAAGCATACACTCGTACCTTCCACT +
Preference number: 6 (lower is better)
Translates to: NEKVVDFSLNAL*IQNKHTLVPST
Trigger: AGTGGAAGGTACGAGTGTATGCTTGTTCTGTATCCAGAGGGCATTCAGACTAAAATCTACAACCTTCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS CAA 90 bp TTATTTCCTGGGACTGGAGACAGAGCCATACACCAAATGGTCAAGTaGTCTGATTGGGCTGGTTTATTACTATGTACCCTTGTTAAAACA +
Preference number: 6 (lower is better)
Translates to: LFPGTGDRAIHQMVK*SDWAGLLLCTLVKT
Trigger: TGTTTTAACAAGGGTACATAGTAATAAACCAGCCCAATCAGACAACTTGACCATTTGGTGTATGGCTCTGTCTCCAGTCCCAGGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1
CDS CAA 72 bp TCTGTGTCAGTCAAGCTGCGTCTTTTTAGTTTCAGCTaGACTGTTATCAAACTCATCTATGTAAGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: SVSVKLRLFSFS*TVIKLIYVSEA
Trigger: TGCCTCACTTACATAGATGAGTTTGATAACAGTCAAGCTGAAACTAAAAAGACGCAGCTTGACTGACACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460744.1
CDS CAA 72 bp AGTTGTCTGATTGGGCTGGTTTATTACTATGTACCCTaGTTAAAACAGACTTCAGTTCCAAAAATCCATCTT +
Preference number: 6 (lower is better)
Translates to: SCLIGLVYYYVP*LKQTSVPKIHL
Trigger: AAGATGGATTTTTGGAACTGAAGTCTGTTTTAACAAGGGTACATAGTAATAAACCAGCCCAATCAGACAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283285.10
ENST00000352690.9
ENST00000438817.6
ENST00000494798.1