Pregenerated sensors for CD8B2 (Homo sapiens)
Ensembl gene IDs: ENSG00000254126Ensembl transcript IDs: ENST00000416057.2, ENST00000643224.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCCTTCCACTGCATCTCAGATGGAAAGGGAGACTGCCCTGGATTaGCCACAGACCAAGCACGGGCCATCCCTTCATCCGCATAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: PPSTASQMERETALD*PQTKHGPSLHPHRA Trigger: CGCCCTATGCGGATGAAGGGATGGCCCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CCA 90 bp | AAGGCTACTCTCCCTACAACCCTCCCCCTTCCACTGCATCTCAGATaGAAAGGGAGACTGCCCTGGATTGACCACAGACCAAGCACGGGC | + |
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Preference number: 1 (lower is better) Translates to: KATLPTTLPLPLHLR*KGRLPWIDHRPSTG Trigger: GCCCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGGAGGGTTGTAGGGAGAGTAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR TCA 90 bp | GAAACACCTACGTCTGGGGGCAGGGAATCTGAGGCCAATTTGTGCTaGCTTCTCAAAGCTGGAGCAAACGGAAAACACCTGGGTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ETPTSGGRESEANLC*LLKAGANGKHLGLG Trigger: CCCCAGACCCAGGTGTTTTCCGTTTGCTCCAGCTTTGAGAAGTCAGCACAAATTGGCCTCAGATTCCCTGCCCCCAGACGTAGGTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR TCA 90 bp | CCTGATTTGTCAATGTCCTTCCTTGAGCTGGCCAGGAGAAGCAGGTaGGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: PDLSMSFLELARRSR*GWILPGPGRGASVN Trigger: ATTAACAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTCTCCTGGCCAGCTCAAGGAAGGACATTGACAAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR GCA 90 bp | TTTACAACTCCCATGCAGCTTCAGGATGGCCTCGCTAGACACGCATaGAGTCTGAGCACCTGTTCAACCATACTCCACCAAGTCCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FTTPMQLQDGLARHA*SLSTCSTILHQVLQ Trigger: TTGCAGGACTTGGTGGAGTATGGTTGAACAGGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCTGCATGGGAGTTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| 3UTR GCA 90 bp | GGGCCCATGGGCTATCTGCTTAGGGTCCACTCCTACCATGTGGAGTaGTTTCTCACTTCAATAAATTCTTCCTTTTGCTGCGTTTATTCC | + |
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Preference number: 1 (lower is better) Translates to: GPMGYLLRVHSYHVE*FLTSINSSFCCVYS Trigger: GGAATAAACGCAGCAAAAGGAAGAATTTATTGAAGTGAGAAAGCACTCCACATGGTAGGAGTGGACCCTAAGCAGATAGCCCATGGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CCA 90 bp | AAACGCTCACCTTCAAACCTCATGCTCCCTCCTAATGACCATCACTaGACCAAGGGTAACTGTATCCTAACTTCTAACAACATATATTTG | + |
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Preference number: 1 (lower is better) Translates to: KRSPSNLMLPPNDHH*TKGNCILTSNNIYL Trigger: CAAATATATGTTGTTAGAAGTTAGGATACAGTTACCCTTGGTCCAGTGATGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTGAGCGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR GCA 90 bp | CTAGTAAGCAGCACTAGAAGGAACAATCTGATGCGTATTTCTTTGTaGATGCCACTTTTTGATGTATTTCTTTCAGATAAATGCCAACAA | + |
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Preference number: 1 (lower is better) Translates to: LVSSTRRNNLMRISL*MPLFDVFLSDKCQQ Trigger: TTGTTGGCATTTATCTGAAAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCTTCTAGTGCTGCTTACTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CAA 90 bp | AGTCTGAGCACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATaGATGATAAGCCTGCACACAGGCCACCCACGTGCTCTTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: SLSTCSTILHQVLQL*MISLHTGHPRALDQ Trigger: TTGGTCAAGAGCACGTGGGTGGCCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGTGCTCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGTCAATGTCCTTCCTTaGGCTGGCCAGGAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFVNVLP*AGQEKQ Trigger: CTGCTTCTCCTGGCCAGCTCAAGGAAGGACATTGAC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGACCCACAAACAAGTTaGTCCCATGCACGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFDPQTS*SHARHT Trigger: TGTGTGACGTGCATGGGAGCAACTTGTTTGTGGGTC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGAGACTGCCCTGGATTaGCCACAGACCAAGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLETALD*PQTKHG Trigger: CCCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTCCCTCCCCCTTCCACTaGATCTCAGATGGAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLPSPFH*ISDGKG Trigger: TCCCTTTCCATCTGAGATGCAGTGGAAGGGGGAGGG...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGATGGAAAGGGAGACTaGCCTGGATTGACCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLDGKGD*PGLTTD Trigger: GTCTGTGGTCAATCCAGGGCAGTCTCCCTTTCCATC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTTTGAACAACTCTTGCTaGGGCAGGAGTCTAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLLNNSC*GRSLGS Trigger: AGACCCTAGACTCCTGCCTCAGCAAGAGTTGTTCAA...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTAAACCCAGAAAACTTTaGAATTGGGCCCATGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLKPRKL*NWAHGL Trigger: TAGCCCATGGGCCCAATTGCAAAGTTTTCTGGGTTT...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGTTCTTTGTTCAAAATaGCAAGGACCTGGACAACTT | + |
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Preference number: 2 (lower is better) Translates to: RNNLMRISLCMPLFDVFLVLCSK*QGPGQL Trigger: AAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAAC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CAA 90 bp | CTCCTACCATGTGGAGTGCTTTCTCACTTCAATAAATTCTTCCTTTaGCTGCGTTTATTCCTTTATTACTTTGTATGTTTTGTTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: LLPCGVLSHFNKFFL*LRLFLYYFVCFVQF Trigger: GAACTGAACAAAACATACAAAGTAATAAAGGAATAAACGCAGCAAAAGGAAGAATTTATTGAAGTGAGAAAGCACTCCACATGGTAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR TCA 72 bp | ACTGCATCTCAGATGGAAAGGGAGACTGCCCTGGATTaGCCACAGACCAAGCACGGGCCATCCCTTCATCCG | + |
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Preference number: 3 (lower is better) Translates to: TASQMERETALD*PQTKHGPSLHP Trigger: CGGATGAAGGGATGGCCCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTCCCTTTCCATCTGAGATGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR TCA 72 bp | AGCTTCAGGATGGCCTCGCTAGACACGCATGCAGTCTaGGCACCTGTTCAACCATACTCCACCAAGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SFRMASLDTHAV*APVQPYSTKSC Trigger: GCAGGACTTGGTGGAGTATGGTTGAACAGGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| 3UTR GCA 72 bp | CCCATGCAGCTTCAGGATGGCCTCGCTAGACACGCATaGAGTCTGAGCACCTGTTCAACCATACTCCACCAA | + |
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Preference number: 3 (lower is better) Translates to: PMQLQDGLARHA*SLSTCSTILHQ Trigger: TTGGTGGAGTATGGTTGAACAGGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCTGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| 3UTR GCA 72 bp | CAAAGGCTACTCTCCCTACAACCCTCCCCCTTCCACTaGATCTCAGATGGAAAGGGAGACTGCCCTGGATTG | + |
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Preference number: 3 (lower is better) Translates to: QRLLSLQPSPFH*ISDGKGDCPGL Trigger: CAATCCAGGGCAGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGGAGGGTTGTAGGGAGAGTAGCCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCCACCCACGTGCTCTaGACCAAAGCGGATCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: EHLFNHTPPSPAIIDDKPATHVL*TKADQA Trigger: TGCCTGATCCGCTTTGGTCAAGAGCACGTGGGTGGC...AGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| 3UTR TCA 72 bp | TCAAGGAGAAACATCTATGTCTGGGGGCAGGGAATCTaGGGCCAATTTGTGCTGACTTCTCAAAGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: SRRNIYVWGQGI*GQFVLTSQSWI Trigger: GATCCAGCTTTGAGAAGTCAGCACAAATTGGCCTCAGATTCCCTGCCCCCAGACATAGATGTTTCTCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR GCA 72 bp | AGATTGAGAAGCAGAAACGCTCACCTTCAAACCTCATaGTCCCTCCTAATGACCATCACTGGACCAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: RLRSRNAHLQTS*SLLMTITGPRV Trigger: TACCCTTGGTCCAGTGATGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTGAGCGTTTCTGCTTCTCAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGGAGACTGCCCTGGATaGACCACAGACCAAGCACGG | + |
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Preference number: 3 (lower is better) Translates to: RNNLMRISLCMPLFDVFLGDCPG*TTDQAR Trigger: CCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTCC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CCA 72 bp | CCTTCAAACCTCATGCTCCCTCCTAATGACCATCACTaGACCAAGGGTAACTGTATCCTAACTTCTAACAAC | + |
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Preference number: 3 (lower is better) Translates to: PSNLMLPPNDHH*TKGNCILTSNN Trigger: GTTGTTAGAAGTTAGGATACAGTTACCCTTGGTCCAGTGATGGTCATTAGGAGGGAGCATGAGGTTTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTAAAACCCAGAAAACTTaGCAATTGGGCCCATGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RNNLMRISLCMPLFDVFLKTQKT*QLGPWA Trigger: AGCCCATGGGCCCAATTGCAAAGTTTTCTGGGTTTT...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCATGCAGCTTCAGGATGGCCTCGCTAGACACGCATGCAGTCTGAGCACCGACACGCATGCAGTCTaGGCACCTGTTCAACCATAC | + |
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Preference number: 4 (lower is better) Translates to: TPMQLQDGLARHACSLSTDTHAV*APVQPY Trigger: GTATGGTTGAACAGGTGCTCAGACTGCATGCGTGTC...GGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCTGCATGGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR TCA 90 bp | TCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACACAGGCCCACCCACGTGCTCTTaGCCAAAGCGGATCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: STILHQVLQLLMISLHTGPPTCS*PKRIRQ Trigger: CTGCCTGATCCGCTTTGGTCAAGAGCACGTGGGTGG...GCCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGAGACTGCCCTGGATTaGCCACAGACCAAGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFETALD*PQTKHG Trigger: CCCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGACGGGGCTACAAAGTaGGCCCTTCTGGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFDGATK*ALLGLW Trigger: CCAGAGACCCAGAAGGGCCCACTTTGTAGCCCCGTC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CCA 90 bp | ACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACGACGGGGCTACAAAGTaGGCCCTTCTGGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TCSTILHQVLQLLMISLHDGATK*ALLGLW Trigger: CCAGAGACCCAGAAGGGCCCACTTTGTAGCCCCGTC...GTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR GCA 90 bp | CCCATGCAGCTTCAGGATGGCCTCGCTAGACACGCATGCAGTCTGAGCACCTGTGTTTATTTCTGCAACTaGTTCCCACATTCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PMQLQDGLARHACSLSTCVYFCN*FPHSKS Trigger: AGATTTGGAATGTGGGAAGCAGTTGCAGAAATAAAC...ACAGGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCTGCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCCCACTGCATCTCAGATaGAAAGGGAGACTGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFPLHLR*KGRLPW Trigger: CCAGGGCAGTCTCCCTTTCCATCTGAGATGCAGTGG...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGCAGTCTCAAACTCCTaGGCTCAGGAGATCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFAVSNS*AQEILP Trigger: TGGGAGGATCTCCTGAGCCCAGGAGTTTGAGACTGC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| 3UTR CAA 72 bp | ACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATaGATGATAAGCCTGCACACAGGCCACCCACGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TCSTILHQVLQL*MISLHTGHPRA Trigger: AGCACGTGGGTGGCCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGATGGAAAGGGAGACTaGCCTGGATTGACCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFDGKGD*PGLTTD Trigger: GTCTGTGGTCAATCCAGGGCAGTCTCCCTTTCCATC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCTTGAACAACTCTTGCTaGGGCAGGAGTCTAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFLNNSC*GRSLGS Trigger: AGACCCTAGACTCCTGCCTCAGCAAGAGTTGTTCAA...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | ACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACCTCGCTAGACACGCATaGAGTCTGAGCACCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TCSTILHQVLQLLMISLHLARHA*SLSTCS Trigger: TGAACAGGTGCTCAGACTGCATGCGTGTCTAGCGAG...GTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCTGCAATTATTGATGATAAGCCTGCACACAGGCCACCCACGTGCTCTATCCATGGGGAAATGTaGAAACAGTTCACAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PSPAIIDDKPAHRPPTCSIHGEM*KQFTRS Trigger: AGATCTTGTGAACTGTTTTCACATTTCCCCATGGAT...AGAGCACGTGGGTGGCCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCCACCTTCAAACCTCATaGTCCCTCCTAATGACCATC | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFHLQTS*SLLMTI Trigger: GATGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTG...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGAGGTCTTGCTATGTTaGCTAGGCTGCTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFEVLLC*LGCSQT Trigger: AGTTTGAGAGCAGCCTAGGCAACATAGCAAGACCTC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | TTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACACAGGTTTTTACAACTCCCATaGAGCTTCAGGATGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FNHTPPSPAIIDDKPAHRFLQLP*SFRMAS Trigger: CGAGGCCATCCTGAAGCTGCATGGGAGTTGTAAAAA...CCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCCCTAATGACCATCACTaGACCAAGGGTAACTGTATC | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFPNDHH*TKGNCI Trigger: GATACAGTTACCCTTGGTCCAGTGATGGTCATTAGG...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTTTGCCCAGGCTGGAGTaGAGTGGCGTGATCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: RNNLMRISLCMPLFDVFLLPRLE*SGVITA Trigger: AGCTGTGATCACGCCACTGCACTCCAGCCTGGGCAA...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR TCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGTCAATGTCCTTCCTTaGGCTGGCCAGGAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RNNLMRISLCMPLFDVFLVNVLP*AGQEKQ Trigger: CTGCTTCTCCTGGCCAGCTCAAGGAAGGACATTGAC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGCACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATCTTGCTAGGCATCCATaGGGAAATGTGAAAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: QSEHLFNHTPPSPAIIDDLARHP*GNVKTV Trigger: AACTGTTTTCACATTTCCCCATGGATGCCTAGCAAG...ATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGTGCTCAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR TCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTCTGGGATTACAGGCATaGGCTGTAATCCCATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RNNLMRISLCMPLFDVFLLGLQA*AVIPCA Trigger: AGCACATGGGATTACAGCTCATGCCTGTAATCCCAG...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCTTTCTTTCAGATAAATaGCAACAAGTGGAACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFFLSDK*QQVELL Trigger: TAGCAGTTCCACTTGTTGGCATTTATCTGAAAGAAA...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCATGCGTATTTCTTTGTaGATGCCACTTTTTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFMRISL*MPLFDV Trigger: TACATCAAAAAGTGGCATGCACAAAGAAATACGCAT...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR TCA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTGTTTTCTTCTGTGCTTaGATTTTAACAGTGACTACG | + |
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Preference number: 4 (lower is better) Translates to: RNNLMRISLCMPLFDVFLVFFCA*ILTVTT Trigger: CGTAGTCACTGTTAAAATTCAAGCACAGAAGAAAAC...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CAA 90 bp | CCCATGCAGCTTCAGGATGGCCTCGCTAGACACGCATGCAGTCTGAGCACCTGTGGCAGTCCCAGTCCCTaGCTAGGCATCCATGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PMQLQDGLARHACSLSTCGSPSP*LGIHGE Trigger: TTCCCCATGGATGCCTAGCAAGGGACTGGGACTGCC...ACAGGTGCTCAGACTGCATGCGTGTCTAGCGAGGCCATCCTGAAGCTGCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS TCA 90 bp | GCAATTATTGATGATAAGCCTGCACACAGGCCACCCACGTGCTCTTaGCCAAAGCGGATCAGGCAGTCCCAGTCCCTTGCTAGGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: AIIDDKPAHRPPTCS*PKRIRQSQSLARHP Trigger: TGGATGCCTAGCAAGGGACTGGGACTGCCTGATCCGCTTTGGTCAAGAGCACGTGGGTGGCCTGTGTGCAGGCTTATCATCAATAATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGTTCAAAATGCCAAGGACCTGGACAACTTACACTCAAGGCCCTCCTTCGGAGACTGCCCTGGATaGACCACAGACCAAGCACGG | + |
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Preference number: 5 (lower is better) Translates to: FFVQNAKDLDNLHSRPSFGDCPG*TTDQAR Trigger: CCGTGCTTGGTCTGTGGTCAATCCAGGGCAGTCTCC...GAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS-3UTR CAA 90 bp | TTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACACAGGGCCACCCACGTGCTCTaGACCAAAGCGGATCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FNHTPPSPAIIDDKPAHRATHVL*TKADQA Trigger: TGCCTGATCCGCTTTGGTCAAGAGCACGTGGGTGGC...CCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS TCA 90 bp | GGATCAGGCAGTCCCAGTCCCTTGCTAGGCATCCATGGGGAAATGTaGAAACAGTTCACAAGATCTGGGTTGTTTCATGAAACGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GSGSPSPLLGIHGEM*KQFTRSGLFHETKP Trigger: CGGCTTCGTTTCATGAAACAACCCAGATCTTGTGAACTGTTTTCACATTTCCCCATGGATGCCTAGCAAGGGACTGGGACTGCCTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CAA 90 bp | CATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACACAGGCCACCCCAAGTCCTGCAATTATaGATGATAAGCCTGCACACA | + |
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Preference number: 5 (lower is better) Translates to: HTPPSPAIIDDKPAHRPPQVLQL*MISLHT Trigger: TGTGTGCAGGCTTATCATCAATAATTGCAGGACTTG...GGGTGGCCTGTGTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTTCAACCATACTCCACCAAGTCCTGCAATTATTGATGATAAGCCTGCACTTCACAAGATCTGGGTaGTTTCATGAAACGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TCSTILHQVLQLLMISLHFTRSG*FHETKP Trigger: CGGCTTCGTTTCATGAAACAACCCAGATCTTGTGAA...GTGCAGGCTTATCATCAATAATTGCAGGACTTGGTGGAGTATGGTTGAACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS-3UTR CAA 90 bp | AGGAACAATCTGATGCGTATTTCTTTGTGCATGCCACTTTTTGATGTATTTCTTTCTTTTGAACAACTCTaGCTGAGGCAGGAGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RNNLMRISLCMPLFDVFLSFEQL*LRQESR Trigger: CCTAGACTCCTGCCTCAGCAAGAGTTGTTCAAAAGA...AAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643224.2 |
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| CDS TCA 72 bp | GATGATAAGCCTGCACACAGGCCACCCACGTGCTCTTaGCCAAAGCGGATCAGGCAGTCCCAGTCCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DDKPAHRPPTCS*PKRIRQSQSLA Trigger: AGCAAGGGACTGGGACTGCCTGATCCGCTTTGGTCAAGAGCACGTGGGTGGCCTGTGTGCAGGCTTATCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS CCA 72 bp | CGGATCAGGCAGTCCCAGTCCCTTGCTAGGCATCCATaGGGAAATGTGAAAACAGTTCACAAGATCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RIRQSQSLARHP*GNVKTVHKIWV Trigger: AACCCAGATCTTGTGAACTGTTTTCACATTTCCCCATGGATGCCTAGCAAGGGACTGGGACTGCCTGATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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| CDS TCA 72 bp | AGTCCCAGTCCCTTGCTAGGCATCCATGGGGAAATGTaGAAACAGTTCACAAGATCTGGGTTGTTTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: SPSPLLGIHGEM*KQFTRSGLFHE Trigger: TTCATGAAACAACCCAGATCTTGTGAACTGTTTTCACATTTCCCCATGGATGCCTAGCAAGGGACTGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416057.2 |
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