Pregenerated sensors for CD8B (Homo sapiens)
Ensembl gene IDs: ENSG00000172116Ensembl transcript IDs: ENST00000331469.6, ENST00000349455.7, ENST00000390655.12, ENST00000393759.6, ENST00000393761.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCCTTCCACTGCATCTCAGATGGAAAGGGAGACGGCCCTGGATTaGCCACAGACCAAGCACGGGCCATCCCTTCATCCGCATAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: PPSTASQMERETALD*PQTKHGPSLHPHRA Trigger: CGCCCTATGCGGATGAAGGGATGGCCCGTGCTTGGTCTGTGGTCAATCCAGGGCCGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR CCA 90 bp | AAGGCTACTCTCCCTACAACCCTCCCCCTTCCACTGCATCTCAGATaGAAAGGGAGACGGCCCTGGATTGACCACAGACCAAGCACGGGC | + |
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Preference number: 1 (lower is better) Translates to: KATLPTTLPLPLHLR*KGRRPWIDHRPSTG Trigger: GCCCGTGCTTGGTCTGTGGTCAATCCAGGGCCGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGGAGGGTTGTAGGGAGAGTAGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR TCA 90 bp | AGGAGTCTAGGGTCTGGGGGCAGGGAATCTAAGGCCAATTCGTGCTaGATCAAGGAGAAACATCTATGTCCGGGGGCAGGGAATCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RSLGSGGRESKANSC*IKEKHLCPGAGNLR Trigger: CCTCAGATTCCCTGCCCCCGGACATAGATGTTTCTCCTTGATTCAGCACGAATTGGCCTTAGATTCCCTGCCCCCAGACCCTAGACTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR TCA 90 bp | CCTGATTTGTCAATGTCCTTCTTTGAGCTGGCCAGGAAAAGCAGGTaGGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: PDLSMSFFELARKSR*GWILPGPGRGASVN Trigger: ATTAACAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGGCCAGCTCAAAGAAGGACATTGACAAATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 90 bp | GTGATTCCCAGATTGAGAAGCAGAAATGCTCACCTTCAAACCTCATaGTCCCTCCTAATGACCACCACTGGACCAAGGGTAACTGTATCC | + |
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Preference number: 1 (lower is better) Translates to: VIPRLRSRNAHLQTS*SLLMTTTGPRVTVS Trigger: GGATACAGTTACCCTTGGTCCAGTGGTGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTGAGCATTTCTGCTTCTCAATCTGGGAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 90 bp | GGGCCCATGGGCTATCTGCTTAGGGTCCACTCCTACCATGTGGAGTaGTTTCTCACTTCAATAAATTCTTCCTTTTGCTGCTTTTATTCC | + |
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Preference number: 1 (lower is better) Translates to: GPMGYLLRVHSYHVE*FLTSINSSFCCFYS Trigger: GGAATAAAAGCAGCAAAAGGAAGAATTTATTGAAGTGAGAAAGCACTCCACATGGTAGGAGTGGACCCTAAGCAGATAGCCCATGGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 90 bp | CTAGTAAGCAACACTAGAAGGAACAATCTGATGCGTATTTCTTTGTaGATGCCACTTTTTGATGTATTTCTTTCAGATAAATGCCAACAA | + |
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Preference number: 1 (lower is better) Translates to: LVSNTRRNNLMRISL*MPLFDVFLSDKCQQ Trigger: TTGTTGGCATTTATCTGAAAGAAATACATCAAAAAGTGGCATGCACAAAGAAATACGCATCAGATTGTTCCTTCTAGTGTTGCTTACTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGACCCACGAACAAGTTaGTCCCATGCACATCACACA | + |
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Preference number: 2 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLDPRTS*SHAHHT Trigger: TGTGTGATGTGCATGGGAGCAACTTGTTCGTGGGTC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGGAGCCCCCTATGACTTaGGGGGTTGATGGTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GVWEDPSERGRNLVKVVKEPPMT*GVDGGR Trigger: TCTGCCACCATCAACCCCCCAAGTCATAGGGGGCTC...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGTCTCTGCTGGGTGTGTaGGAGGATCCCTCTGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWSLLGV*EDPSER Trigger: TCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGA...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR TCA 90 bp | TTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAGTGGGAGGATCCCTCTaGGCGAGGGAGGAATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FIQDGYIWFHKGDTLGFTVGGSL*AREESG Trigger: ACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCAC...TGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGGCCAGGAAAAGCAGGTaGGGCTGGATTCTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLARKSR*GWILPG Trigger: TCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGGC...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CCA 90 bp | TTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACATCTCTGCTGGGTGTGTaGGAGGATCCCTCTGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: FIQDGYIWFHKGDTLGFTSLLGV*EDPSER Trigger: TCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGA...TGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGCAGAGAAGTCTCTGCTaGGTGTGTGGGAGGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: GQIYSRWIHLVPQGGHFGQRSLC*VCGRIP Trigger: AGGGATCCTCCCACACACCCAGCAGAGACTTCTCTG...CCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCCACCAGGGCAGAACTTaGGCCCCCTATGACTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRSLGFWANLFKMDTFGSHQGRT*APYDLG Trigger: CCCCAAGTCATAGGGGGCTCAAGTTCTGCCCTGGTG...GGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCCCATCTCCCCACACTaGGTAACCAAGGATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLPISPH*VTKDQR Trigger: CCTTTGATCCTTGGTTACTCAGTGTGGGGAGATGGG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGTTGAACACCTCTTGCTaGGGCAGGAGTCTAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLLNTSC*GRSLGS Trigger: AGACCCTAGACTCCTGCCTCAGCAAGAGGTGTTCAA...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CCA 90 bp | AGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACGAGCCCCCTATGACTTaGGGGGTTGATGGTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RILGKFIQDGYIWFHKGDEPPMT*GVDGGR Trigger: TCTGCCACCATCAACCCCCCAAGTCATAGGGGGCTC...GTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCTGGGGTTCACAAGGATaGGGGCCACAGCTCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRSLGFWANLFKMDTFGSWGSQG*GPQLTR Trigger: CCTGGTGAGCTGTGGCCCCCATCCTTGTGAACCCCA...GGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGTGTCCTTCTTTGAGCTaGCCAGGAAAAGCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLCPSLS*PGKAGE Trigger: CTCACCTGCTTTTCCTGGCCAGCTCAAAGAAGGACA...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGTGGGAGGATCCCTCTaGGCGAGGGAGGAATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLGFWANLFKMDTFGSTRVGGSL*AREESG Trigger: ACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCAC...CCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCAAAGCTGGATCAAATaGAAAACACCTGGGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLQSWIK*KTPGSG Trigger: CCCAGACCCAGGTGTTTTCCATTTGATCCAGCTTTG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR GCA 90 bp | TTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCTGGCAGAGAAGTCTCTaGTGGGTGTGTGGGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: FPVFRILGKFIQDGYIWFWQRSL*WVCGRI Trigger: GATCCTCCCACACACCCAGCAGAGACTTCTCTGCCA...GAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGACTCATCAGGACCTGTaGTTCTTGCCTATGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: IQDGYIWFHKGDTLGFTRTHQDL*FLPMFS Trigger: TGAAAACATAGGCAAGAAGCACAGGTCCTGATGAGT...CCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393759.6 |
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| 3UTR-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGAAAATGCCAAGGACCTaGACAACTTACACTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLKMPRT*TTYTQG Trigger: GCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTT...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGAGAAAACTTTGCAATTaGGCCCATGGGCTATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLRKLCN*AHGLSA Trigger: AGCAGATAGCCCATGGGCCCAATTGCAAAGTTTTCT...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGTGGCAGAGAAGTCTCTaGTGGGTGTGTGGGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: SLGFWANLFKMDTFGSTRWQRSL*WVCGRI Trigger: GATCCTCCCACACACCCAGCAGAGACTTCTCTGCCA...CCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTCAAGATGGATACATTTaGTTCCACAAGGGGGACACT | + |
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Preference number: 2 (lower is better) Translates to: FSRSLGFWANLFKMDTFGQDGYI*FHKGDT Trigger: AGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTG...ACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR CCA 72 bp | CAGCTCACCAGGGCAGAACTTGAGCCCCCTATGACTTaGGGGGTTGATGGTGGCAGAGAAGTCTCTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QLTRAELEPPMT*GVDGGREVSAG Trigger: CCCAGCAGAGACTTCTCTGCCACCATCAACCCCCCAAGTCATAGGGGGCTCAAGTTCTGCCCTGGTGAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
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| 3UTR TCA 72 bp | ACTGCATCTCAGATGGAAAGGGAGACGGCCCTGGATTaGCCACAGACCAAGCACGGGCCATCCCTTCATCCG | + |
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Preference number: 3 (lower is better) Translates to: TASQMERETALD*PQTKHGPSLHP Trigger: CGGATGAAGGGATGGCCCGTGCTTGGTCTGTGGTCAATCCAGGGCCGTCTCCCTTTCCATCTGAGATGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 72 bp | CAAAGGCTACTCTCCCTACAACCCTCCCCCTTCCACTaGATCTCAGATGGAAAGGGAGACGGCCCTGGATTG | + |
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Preference number: 3 (lower is better) Translates to: QRLLSLQPSPFH*ISDGKGDGPGL Trigger: CAATCCAGGGCCGTCTCCCTTTCCATCTGAGATGCAGTGGAAGGGGGAGGGTTGTAGGGAGAGTAGCCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR TCA 72 bp | TCAATGTCCTTCTTTGAGCTGGCCAGGAAAAGCAGGTaGGGCTGGATTCTCCCTGGACCTGGACGTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SMSFFELARKSR*GWILPGPGRGA Trigger: AGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGGCCAGCTCAAAGAAGGACATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR TCA 72 bp | ACGTCTGGGGGCAGGGAATCTGAGGCCAATTTGTGCTaGCTTCTCAAAGCTGGAGCAAACGGAAAACACCTG | + |
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Preference number: 3 (lower is better) Translates to: TSGGRESEANLC*LLKAGANGKHL Trigger: CAGGTGTTTTCCGTTTGCTCCAGCTTTGAGAAGTCAGCACAAATTGGCCTCAGATTCCCTGCCCCCAGACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR CCA 72 bp | GGCCAATTTGTGCTGACTTCTCAAAGCTGGATCAAATaGAAAACACCTGGGTCTGGGGGCAGGGCATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: GQFVLTSQSWIK*KTPGSGGRASK Trigger: CTTAGATGCCCTGCCCCCAGACCCAGGTGTTTTCCATTTGATCCAGCTTTGAGAAGTCAGCACAAATTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR TCA 72 bp | TCAAGGAGAAACATCTATGTCCGGGGGCAGGGAATCTaGGGCCAATTTGTGCTGACTTCTCAAAGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: SRRNIYVRGQGI*GQFVLTSQSWI Trigger: GATCCAGCTTTGAGAAGTCAGCACAAATTGGCCTCAGATTCCCTGCCCCCGGACATAGATGTTTCTCCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 72 bp | AGATTGAGAAGCAGAAATGCTCACCTTCAAACCTCATaGTCCCTCCTAATGACCACCACTGGACCAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: RLRSRNAHLQTS*SLLMTTTGPRV Trigger: TACCCTTGGTCCAGTGGTGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTGAGCATTTCTGCTTCTCAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CAA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGTCTTTTGAACACCTCTaGCTGAGGCAGGAGTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLSFEHL*LRQESR Trigger: CCTAGACTCCTGCCTCAGCAAGAGGTGTTCAAAAGA...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CAA 90 bp | ATGGTTCCCTTTTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATCACAAGGGGGACACTTaGGGGTTCACAAGGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: MVPFSRSLGFWANLFKMDHKGDT*GFTRMG Trigger: CCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTG...ATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAAGGGAACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR CCA 72 bp | CCTTCAAACCTCATGCTCCCTCCTAATGACCACCACTaGACCAAGGGTAACTGTATCCTAACTTCTAACAAC | + |
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Preference number: 3 (lower is better) Translates to: PSNLMLPPNDHH*TKGNCILTSNN Trigger: GTTGTTAGAAGTTAGGATACAGTTACCCTTGGTCCAGTGGTGGTCATTAGGAGGGAGCATGAGGTTTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 72 bp | GGCTATCTGCTTAGGGTCCACTCCTACCATGTGGAGTaGTTTCTCACTTCAATAAATTCTTCCTTTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GYLLRVHSYHVE*FLTSINSSFCC Trigger: GCAGCAAAAGGAAGAATTTATTGAAGTGAGAAAGCACTCCACATGGTAGGAGTGGACCCTAAGCAGATAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR CCA 72 bp | GTTTTGTTCAGTTCTTTGTTCAAAATGCCAAGGACCTaGACAACTTACACTCAAGGCCCTCCTTCCGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: VLFSSLFKMPRT*TTYTQGPPSGN Trigger: GTTACCGGAAGGAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAACTGAACAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTCACAAGGGGGACACTTaGGGGTTCACAAGGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: FSRSLGFWANLFKMDTFGHKGDT*GFTRMG Trigger: CCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTG...ACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| 3UTR GCA 72 bp | ACTCATATAAGTGATTCCCAGATTGAGAAGCAGAAATaGTCACCTTCAAACCTCATGCTCCCTCCTAATGAC | + |
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Preference number: 3 (lower is better) Translates to: THISDSQIEKQK*SPSNLMLPPND Trigger: GTCATTAGGAGGGAGCATGAGGTTTGAAGGTGAGCATTTCTGCTTCTCAATCTGGGAATCACTTATATGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR GCA 72 bp | TTACTTTGTATGTTTTGTTCAGTTCTTTGTTCAAAATaGCAAGGACCTGGACAACTTACACTCAAGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLCMFCSVLCSK*QGPGQLTLKAL Trigger: GAGGGCCTTGAGTGTAAGTTGTCCAGGTCCTTGGCATTTTGAACAAAGAACTGAACAAAACATACAAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| 3UTR CCA 72 bp | AGCTCAATGGTTCCCTTTTCCCGGTCTTTAGGATTTTaGGCAAATTTATTCAAGATGGATACATTTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSMVPFSRSLGF*ANLFKMDTFGS Trigger: GGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAAGGGAACCATTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393761.6 |
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| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGAGACGGCCCTGGATTaGCCACAGACCAAGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLETALD*PQTKHG Trigger: CCCGTGCTTGGTCTGTGGTCAATCCAGGGCCGTCTC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR GCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTGGAGAACTGTCAGCTaGGCGGCCAAGAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLWRTVS*AAKRSH Trigger: GTGGCTCCTCTTGGCCGCGCAGCTGACAGTTCTCCA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTGCTGGGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAGTGGGAGGATCCCTCTaGGCGAGGGAGGAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLLGVWEDPSERGRNLVVGGSL*AREESG Trigger: ACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCAC...TACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGATGGGGCTACAAAGTaGGCCCTTCTGGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLDGATK*ALLGLW Trigger: CCAGAGACCCAGAAGGGCCCACTTTGTAGCCCCATC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGAGGCTGGATTCTCCCTaGACCTGGACGTGGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLRLDSP*TWTWCF Trigger: GAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCT...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGAGGACTGAGTTGCCATaGAGAACTGTCAGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLRTELP*RTVSCA Trigger: CGCGCAGCTGACAGTTCTCCATGGCAACTCAGTCCT...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGCCCATCTCCCCACACTaGGTAACCAAGGATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLPISPH*VTKDQR Trigger: CCTTTGATCCTTGGTTACTCAGTGTGGGGAGATGGG...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTTGAACACCTCTTGCTaGGGCAGGAGTCTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLLNTSC*GRSLGS Trigger: AGACCCTAGACTCCTGCCTCAGCAAGAGGTGTTCAA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGCACCAGGGCAGAACTTaGGCCCCCTATGACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVWEDPSERGRNLVKVVKHQGRT*APYDLG Trigger: CCCCAAGTCATAGGGGGCTCAAGTTCTGCCCTGGTG...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGTCAATGTCCTTCTTTaGGCTGGCCAGGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLVNVLL*AGQEKQ Trigger: CTGCTTTTCCTGGCCAGCTCAAAGAAGGACATTGAC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGAGGCCAATTTGTGCTaGCTTCTCAAAGCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLEANLC*LLKAGA Trigger: TGCTCCAGCTTTGAGAAGTCAGCACAAATTGGCCTC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR GCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGTGGAGAACTGTCAGCTaGGCGGCCAAGAGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVWEDPSERGRNLVKVVKWRTVS*AAKRSH Trigger: GTGGCTCCTCTTGGCCGCGCAGCTGACAGTTCTCCA...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGCACCTTCAAACCTCATaGTCCCTCCTAATGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLHLQTS*SLLMTT Trigger: GGTGGTCATTAGGAGGGAGCATGAGGTTTGAAGGTG...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAAGGACTGAGTTGCCATaGAGAACTGTCAGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVWEDPSERGRNLVKVRTELP*RTVSCA Trigger: CGCGCAGCTGACAGTTCTCCATGGCAACTCAGTCCT...TACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTACAGAGAAGTCTCTGCTaGGTGTGTGGGAGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVWEDPSERGRNLVKVQRSLC*VCGRIP Trigger: AGGGATCCTCCCACACACCCAGCAGAGACTTCTCTG...TACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTGTCCTTCTTTGAGCTaGCCAGGAAAAGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLCPSLS*PGKAGE Trigger: CTCACCTGCTTTTCCTGGCCAGCTCAAAGAAGGACA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTATGGCAGAGAAGTCTCTaGTGGGTGTGTGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGVWEDPSERGRNLVKVVWQRSL*WVCGRI Trigger: GATCCTCCCACACACCCAGCAGAGACTTCTCTGCCA...TACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGTCTCTGCTGGGTGTGTaGGAGGATCCCTCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVWEDPSERGRNLVKVVKSLLGV*EDPSER Trigger: TCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGA...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | ATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGGGGTCTCTGCTGGGTGTGTaGGAGGATCCCTCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MDTFGSTRGTLWGSQGWGSLLGV*EDPSER Trigger: TCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGA...CCCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGCAAAGCTGGATCAAATaGAAAACACCTGGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLQSWIK*KTPGSG Trigger: CCCAGACCCAGGTGTTTTCCATTTGATCCAGCTTTG...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATTGGGGGACAAAGGTTCCTGATATACCTTCCCCTTGAGGCCTGTATACAGAGAAGTCTCTGCTaGGTGTGTGGGAGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGIGGQRFLIYLPLEACIQRSLC*VCGRIP Trigger: AGGGATCCTCCCACACACCCAGCAGAGACTTCTCTG...TATACAGGCCTCAAGGGGAAGGTATATCAGGAACCTTTGTCCCCCAATGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393759.6 |
||
| CDS-3UTR CCA 90 bp | ATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGGGGCAGAGAAGTCTCTGCTaGGTGTGTGGGAGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MDTFGSTRGTLWGSQGWGQRSLC*VCGRIP Trigger: AGGGATCCTCCCACACACCCAGCAGAGACTTCTCTG...CCCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGTGGGGTTCACAAGGATaGGGGCCACAGCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWWGSQG*GPQLTR Trigger: CCTGGTGAGCTGTGGCCCCCATCCTTGTGAACCCCA...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGGAGCCCCCTATGACTTaGGGGGTTGATGGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWEPPMT*GVDGGR Trigger: TCTGCCACCATCAACCCCCCAAGTCATAGGGGGCTC...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTTATTAGACTGTGTCTaGATTTATCTGACCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLLLDCV*IYLTSP Trigger: GGGACTGGTCAGATAAATTCAGACACAGTCTAATAA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTATGTTTTCAGGATCCATGGGTTAAGCAGCTTCTGTGAGGTTGTAGTATGGAGAACTGTCAGCTaGGCGGCCAAGAGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAYVFRIHGLSSFCEVVVWRTVS*AAKRSH Trigger: GTGGCTCCTCTTGGCCGCGCAGCTGACAGTTCTCCA...TACTACAACCTCACAGAAGCTGCTTAACCCATGGATCCTGAAAACATAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393759.6 |
||
| CDS-3UTR GCA 90 bp | AAGTCTCTGCTGGGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAACTCATCAGGACCTGTaGTTCTTGCCTATGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLLGVWEDPSERGRNLVTHQDL*FLPMFS Trigger: TGAAAACATAGGCAAGAAGCACAGGTCCTGATGAGT...TACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACCCAGCAGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR GCA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGTGGCAGAGAAGTCTCTaGTGGGTGTGTGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWWQRSL*WVCGRI Trigger: GATCCTCCCACACACCCAGCAGAGACTTCTCTGCCA...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGATTGAGAAGCAGAAATaGTCACCTTCAAACCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLIEKQK*SPSNLM Trigger: CATGAGGTTTGAAGGTGAGCATTTCTGCTTCTCAAT...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCAGCTCACTGCAGTCTaGAACTCCTGGGGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLQLTAV*NSWGQE Trigger: CTCCTGACCCCAGGAGTTTCAGACTGCAGTGAGCTG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACATGGAGAACTGTCAGCTaGGCGGCCAAGAGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIQDGYIWFHKGDTLGFTWRTVS*AAKRSH Trigger: GTGGCTCCTCTTGGCCGCGCAGCTGACAGTTCTCCA...TGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCCACTGCATCTCAGATaGAAAGGGAGACGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLPLHLR*KGRRPW Trigger: CCAGGGCCGTCTCCCTTTCCATCTGAGATGCAGTGG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGGATATACCTTCCCCTTaGGGCTGTTTCATGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: GVWEDPSERGRNLVKVVKDIPSP*GCFMKR Trigger: TCGTTTCATGAAACAGCCTCAAGGGGAAGGTATATC...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000349455.7 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTATGTTTTCAGGATCCATGGGTTAAGCAGCTTCTGTGAGGTTGTAGTAAGGACTGAGTTGCCATaGAGAACTGTCAGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAYVFRIHGLSSFCEVVVRTELP*RTVSCA Trigger: CGCGCAGCTGACAGTTCTCCATGGCAACTCAGTCCT...TACTACAACCTCACAGAAGCTGCTTAACCCATGGATCCTGAAAACATAGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393759.6 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTAAAAGTAGTAAAGATCCACTCATCAGGACCTGTGCTTCTTGCCTATTGGGGTTCACAAGGATaGGGGCCACAGCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVKVVKIHSSGPVLLAYWGSQG*GPQLTR Trigger: CCTGGTGAGCTGTGGCCCCCATCCTTGTGAACCCCA...ATAGGCAAGAAGCACAGGTCCTGATGAGTGGATCTTTACTACTTTTACCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | ATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGGGGCAAGATGGATACATTTaGTTCCACAAGGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: MDTFGSTRGTLWGSQGWGQDGYI*FHKGDT Trigger: AGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTG...CCCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCAAATGGAAAACACCTaGGTCTGGGGGCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLQMENT*VWGQGI Trigger: GATGCCCTGCCCCCAGACCCAGGTGTTTTCCATTTG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTGGGAGGATCCCTCTGAGCGAGGGAGGAATCTGGTAAAAGTAGTAAAGGTTAAGCAGCTTCTGTaGGGTTGTAGTATTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVWEDPSERGRNLVKVVKVKQLL*GCSIAV Trigger: TACAGCAATACTACAACCTCACAGAAGCTGCTTAAC...CTTTACTACTTTTACCAGATTCCTCCCTCGCTCAGAGGGATCCTCCCACACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000349455.7 ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR TCA 90 bp | TTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGCACCAGGGCAGAACTTaGGCCCCCTATGACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFWANLFKMDTFGSTRGHQGRT*APYDLG Trigger: CCCCAAGTCATAGGGGGCTCAAGTTCTGCCCTGGTG...CCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTTCCCTTTTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATCACCAGGGCAGAACTTaGGCCCCCTATGACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVPFSRSLGFWANLFKMDHQGRT*APYDLG Trigger: CCCCAAGTCATAGGGGGCTCAAGTTCTGCCCTGGTG...ATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAAGGGAACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR GCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGGTGATCACAGCTCACTaGAGTCTGAAACTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLVITAH*SLKLLG Trigger: CCCCAGGAGTTTCAGACTGCAGTGAGCTGTGATCAC...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | AATCTGGTAAAAGTAGTAAAGATCCACTCATCAGGACCTGTGCTTCTTGCCTATGAGCCCCCTATGACTTaGGGGGTTGATGGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLVKVVKIHSSGPVLLAYEPPMT*GVDGGR Trigger: TCTGCCACCATCAACCCCCCAAGTCATAGGGGGCTC...ATAGGCAAGAAGCACAGGTCCTGATGAGTGGATCTTTACTACTTTTACCAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | AGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACAGGACTGAGTTGCCATaGAGAACTGTCAGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RILGKFIQDGYIWFHKGDRTELP*RTVSCA Trigger: CGCGCAGCTGACAGTTCTCCATGGCAACTCAGTCCT...GTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGCAAGATGGATACATTTaGTTCCACAAGGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWQDGYI*FHKGDT Trigger: AGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTG...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
||
| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGAGTGATCATTCTGTGTaGGCCTCCCAAAGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLSDHSV*ASQSTG Trigger: CCCAGTACTTTGGGAGGCCCACACAGAATGATCACT...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCTGCTCTCAAACTCCTaGGCTCAAGTGATCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLLLSNS*AQVIIL Trigger: CAGAATGATCACTTGAGCTCAGGAGTTTGAGAGCAG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
||
| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCTGACTTCTCAAAGCTaGAGCAAACGGAAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLLTSQS*SKRKTP Trigger: AGGTGTTTTCCGTTTGCTCCAGCTTTGAGAAGTCAG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR TCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGGTGTCTGAATTTATCTaGCCAGTCCCTTTTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLVSEFI*PVPFDG Trigger: TCCATCAAAAGGGACTGGTCAGATAAATTCAGACAC...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCTGACTTCTCAAAGCTaGATCAAATGGAAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLLTSQS*IKWKTP Trigger: AGGTGTTTTCCATTTGATCCAGCTTTGAGAAGTCAG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR CCA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGTGTACAAAGCAGAAGTaGAAATTCCGCAGAGTAACT | + |
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Preference number: 4 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLCTKQK*KFRRVT Trigger: AGTTACTCTGCGGAATTTCCACTTCTGCTTTGTACA...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR TCA 90 bp | TCAATGGTTCCCTTTTCCCGGTCTTTAGGATTTTGGGCAAATTTATTCAAGATGGTTAAGCAGCTTCTGTaGGGTTGTAGTATTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SMVPFSRSLGFWANLFKMVKQLL*GCSIAV Trigger: TACAGCAATACTACAACCTCACAGAAGCTGCTTAAC...CATCTTGAATAAATTTGCCCAAAATCCTAAAGACCGGGAAAAGGGAACCATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393761.6 |
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| CDS-3UTR TCA 90 bp | TCTTTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGTTAAGCAGCTTCTGTaGGGTTGTAGTATTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLGFWANLFKMDTFGSTRVKQLL*GCSIAV Trigger: TACAGCAATACTACAACCTCACAGAAGCTGCTTAAC...CCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGGGAGACGGCCCTGGATaGACCACAGACCAAGCACGG | + |
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Preference number: 5 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLGDGPG*TTDQAR Trigger: CCGTGCTTGGTCTGTGGTCAATCCAGGGCCGTCTCC...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTGTCAATGTCCTTCTTaGAGCTGGCCAGGAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLCQCPS*SWPGKA Trigger: TGCTTTTCCTGGCCAGCTCAAAGAAGGACATTGACA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGAAAACCCAGAAAACTTaGCAATTGGGCCCATGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLKTQKT*QLGPWA Trigger: AGCCCATGGGCCCAATTGCAAAGTTTTCTGGGTTTT...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS TCA 90 bp | AGTATTGCTGTAGTATCCATGCAGGCATTGGGGGACAAAGGTTCCTaGTATACCTTCCCCTTGAGGCCCTTCTGGGTCTCTGGCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SIAVVSMQALGDKGS*YTFPLRPFWVSGLG Trigger: ACCCAGGCCAGAGACCCAGAAGGGCCTCAAGGGGAAGGTATATCAGGAACCTTTGTCCCCCAATGCCTGCATGGATACTACAGCAATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | AAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATGGCACAAGGGGGACACTTaGGGGTTCACAAGGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: KMDTFGSTRGTLWGSQGWHKGDT*GFTRMG Trigger: CCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTG...CCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | TCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGGTTCACAAGGATCACAAGGGGGACACTTaGGGGTTCACAAGGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: SRWIHLVPQGGHFGVHKDHKGDT*GFTRMG Trigger: CCCCATCCTTGTGAACCCCAAAGTGTCCCCCTTGTG...ATCCTTGTGAACCCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGCTGATGCGTATTTCTTaGTGCATGCCACTTTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLLMRIS*CMPLFD Trigger: ATCAAAAAGTGGCATGCACAAAGAAATACGCATCAG...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS TCA 90 bp | AGTATTGCTGTAGTATCCATGCAGGCATTGGGGGACAAAGGTTCCTaGTATACCTTCCCCTTGAGGCTGTTTCATGAAACGAAGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SIAVVSMQALGDKGS*YTFPLRLFHETKPG Trigger: GCCCGGCTTCGTTTCATGAAACAGCCTCAAGGGGAAGGTATATCAGGAACCTTTGTCCCCCAATGCCTGCATGGATACTACAGCAATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331469.6 ENST00000349455.7 |
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| CDS-3UTR CAA 90 bp | CCAGGAAAAGCAGGTGAGGCTGGATTCTCCCTGGACCTGGACGTGGTGCTTCTGTGCTCATTTGTAAAATaGTTTCATGAAACGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PGKAGEAGFSLDLDVVLLCSFVK*FHETKP Trigger: CGGCTTCGTTTCATGAAACAATTTTACAAATGAGCA...CAGAAGCACCACGTCCAGGTCCAGGGAGAATCCAGCCTCACCTGCTTTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS-3UTR CAA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGCGAGGTCTTGCTATGTaGCCTAGGCTGCTCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLRGLAM*PRLLSN Trigger: GTTTGAGAGCAGCCTAGGCAACATAGCAAGACCTCG...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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| CDS TCA 90 bp | AGTATTGCTGTAGTATCCATGCAGGCATTGGGGGACAAAGGTTCCTaGTATACCTTCCCCTTGAGGCCTGTATATTCAGTAGTCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: SIAVVSMQALGDKGS*YTFPLRPVYSVVHS Trigger: AGAATGGACTACTGAATATACAGGCCTCAAGGGGAAGGTATATCAGGAACCTTTGTCCCCCAATGCCTGCATGGATACTACAGCAATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393759.6 |
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| CDS-3UTR CAA 90 bp | GGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGACACTTTGGGTCAAGATGGATACATTaGGTTCCACAAGGGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: GQIYSRWIHLVPQGGHFGSRWIH*VPQGGH Trigger: GTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGA...CCCAAAGTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | TTAGGATTTTGGGCAAATTTATTCAAGATGGATACATTTGGTTCCACAAGGGGGTCAAGATGGATACATTaGGTTCCACAAGGGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: LGFWANLFKMDTFGSTRGSRWIH*VPQGGH Trigger: GTGTCCCCCTTGTGGAACCAAATGTATCCATCTTGA...CCCCCTTGTGGAACCAAATGTATCCATCTTGAATAAATTTGCCCAAAATCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393759.6 ENST00000393761.6 |
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| CDS-3UTR CAA 90 bp | CGCCTAAACCCCCTTATTAGACTGTGTCTGAATTTATCTGACCAGTCCCTTTTGGTTTTGTTCAGTTCTTaGTTCAAAATGCCAAGGACC | + |
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Preference number: 5 (lower is better) Translates to: RLNPLIRLCLNLSDQSLLVLFSS*FKMPRT Trigger: GGTCCTTGGCATTTTGAACAAAGAACTGAACAAAAC...CAAAAGGGACTGGTCAGATAAATTCAGACACAGTCTAATAAGGGGGTTTAGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000390655.12 |
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