RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD84 (Homo sapiens)

Ensembl gene IDs: ENSG00000066294

Ensembl transcript IDs: ENST00000311224.8, ENST00000360056.7, ENST00000368047.3, ENST00000368048.7, ENST00000368051.3, ENST00000368054.8, ENST00000466767.1, ENST00000534968.5

Found 613 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTCTGTGGACACGGCCCAAACCAGACAGGCCCCTTCCTGCCTGTaGCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCC +
Preference number: 1 (lower is better)
Translates to: LSVDTAQTRQAPSCL*PISKLAQPGYSLIA
Trigger: GGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCTGGTTTGGGCCGTGTCCACAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp GAAGTGCTCTCTGTGGACACGGCCCAAACCAGACAGGCCCCTTCCTaGCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTC +
Preference number: 1 (lower is better)
Translates to: EVLSVDTAQTRQAPS*LCPISKLAQPGYSL
Trigger: GAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp AAATATAGCCCAGCCATTCCTTCTCTCCAGGCAGGACCTAAGAAGTaGTCTCTGTGGACACGGCCCAAACCAGACAGGCCCCTTCCTGCC +
Preference number: 1 (lower is better)
Translates to: KYSPAIPSLQAGPKK*SLWTRPKPDRPLPA
Trigger: GGCAGGAAGGGGCCTGTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTCTTAGGTCCTGCCTGGAGAGAAGGAATGGCTGGGCTATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp ATTCCCAGACAAAGGGATGAGTGTGCTTATATGCAGCCCACATTCTaGTCTCCAAGCCATGCACTCGGGGGAAGGGCTGCATCTGCCTCA +
Preference number: 1 (lower is better)
Translates to: IPRQRDECAYMQPTF*SPSHALGGRAASAS
Trigger: TGAGGCAGATGCAGCCCTTCCCCCGAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCATATAAGCACACTCATCCCTTTGTCTGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp CTGGCTGGTGATCTGTTTGTGGGGCATGCCAGGGTGGCGGCACTCTaGCTCAGCTTAAACTCTAGTTCTCTGAGTCTTTGGAACTGGGAT +
Preference number: 1 (lower is better)
Translates to: LAGDLFVGHARVAAL*LSLNSSSLSLWNWD
Trigger: ATCCCAGTTCCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGATCACCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GACAGAAGGGAGAGAAGGGCATCCCAGACAACATGGGCAAAGGCATaGGAGGATTTGGTGGGTGTGTGGGCCCATGATAATTCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: DRRERRASQTTWAKA*EDLVGVWAHDNSVW
Trigger: CCACACAGAATTATCATGGGCCCACACACCCACCAAATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGCCCTTCTCTCCCTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp GGAAGGGCTGCATCTGCCTCAAGCGAAGGGTACATTTTCCTAATTTaGTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAC +
Preference number: 1 (lower is better)
Translates to: GRAASASSEGYIFLI*SRCVVKATHQGSSH
Trigger: GTGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp CACATTCTGCTCTCCAAGCCATGCACTCGGGGGAAGGGCTGCATCTaGCTCAAGCGAAGGGTACATTTTCCTAATTTGCTCAAGATGCGT +
Preference number: 1 (lower is better)
Translates to: HILLSKPCTRGKGCI*LKRRVHFPNLLKMR
Trigger: ACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCCCCGAGTGCATGGCTTGGAGAGCAGAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GTGAATGATTCTTCCTCATTGAGGAGAGTTAATGCCTGTGTAAGCTaGCTGGTGATCTGTTTGTGGGGCATGCCAGGGTGGCGGCACTCT +
Preference number: 1 (lower is better)
Translates to: VNDSSSLRRVNACVS*LVICLWGMPGWRHS
Trigger: AGAGTGCCGCCACCCTGGCATGCCCCACAAACAGATCACCAGCCAGCTTACACAGGCATTAACTCTCCTCAATGAGGAAGAATCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp GCACAAGCTATGCCCAGCAGAAGGTTTCCTGCTTTGCTTACAGGCTaGGATGTGGCAGTTTGCAATCTCCCAGTAAGAGTTGGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: AQAMPSRRFPALLTG*DVAVCNLPVRVGQR
Trigger: TCTCTGCCCAACTCTTACTGGGAGATTGCAAACTGCCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTGGGCATAGCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp GGAGGTTTTAGAAGGCCGCACAAGAGGGATATTCAGTCTGATGCTTaGTGTAGACAGAAGGGAGAGAAGGGCATCCCAGACAACATGGGC +
Preference number: 1 (lower is better)
Translates to: GGFRRPHKRDIQSDA*CRQKGEKGIPDNMG
Trigger: GCCCATGTTGTCTGGGATGCCCTTCTCTCCCTTCTGTCTACATCAAGCATCAGACTGAATATCCCTCTTGTGCGGCCTTCTAAAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp TATGACCAAGCCTCTTTCCTCCTTCCTGCACGTCTCTTCTTGGGGTaGTGTCTTTCACCTCCTTACAACTGGTTAGGTGCTTCAGCTGAC +
Preference number: 1 (lower is better)
Translates to: YDQASFLLPARLFLG*CLSPPYNWLGASAD
Trigger: GTCAGCTGAAGCACCTAACCAGTTGTAAGGAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAGGCTTGGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp ACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTaGGCTCTGGCTTCATCCCAGGTTTGCTCTTCTGGAAGACCTAAC +
Preference number: 1 (lower is better)
Translates to: TRVGCPESKGYLQNS*ALASSQVCSSGRPN
Trigger: GTTAGGTCTTCCAGAAGAGCAAACCTGGGATGAAGCCAGAGCCCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp AAACGCAGCCTGTTCAGTGTCACTTTGGAATTCCTCCATCCTTTATaGCCAAGCCTCTTTCCTCCTTCCTGCACGTCTCTTCTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: KRSLFSVTLEFLHPL*PSLFPPSCTSLLGV
Trigger: CACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAGGCTTGGTCATAAAGGATGGAGGAATTCCAAAGTGACACTGAACAGGCTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp GCATCTGCCTCAAGCGAAGGGTACATTTTCCTAATTTGCTCAAGATaGGTGGTGAAGGCCACGCACCAGGGATCTTCACACATACTGACT +
Preference number: 1 (lower is better)
Translates to: ASASSEGYIFLICSR*VVKATHQGSSHILT
Trigger: AGTCAGTATGTGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp TTCCTCATTTTCTCAGTTGAGTCCCTCAGTAAAGCCCAAGGTGTCTaGAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGGG +
Preference number: 1 (lower is better)
Translates to: FLIFSVESLSKAQGV*RQDCPNLLELSTRG
Trigger: CCCTCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTTACTGAGGGACTCAACTGAGAAAATGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp CCCAGAAGTGTGAGAAATATAAGCTGGTCAGTTCCTTTTGGAGAGTaGGAATACTGGGCATGGCTGCTTCTTCTGCTGAGGCTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: PRSVRNISWSVPFGE*EYWAWLLLLLRLLG
Trigger: TCCAAGCAGCCTCAGCAGAAGAAGCAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATTTCTCACACTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp CCAGTTCCCCAGAAGTGTGAGAAATATAAGCTGGTCAGTTCCTTTTaGAGAGTGGGAATACTGGGCATGGCTGCTTCTTCTGCTGAGGCT +
Preference number: 1 (lower is better)
Translates to: PVPQKCEKYKLVSSF*RVGILGMAASSAEA
Trigger: AGCCTCAGCAGAAGAAGCAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATTTCTCACACTTCTGGGGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GTGGCGGCACTCTGCCTCAGCTTAAACTCTAGTTCTCTGAGTCTTTaGAACTGGGATGAACCCAGTTTCATCATCTGCACCATCATCTCC +
Preference number: 1 (lower is better)
Translates to: VAALCLSLNSSSLSL*NWDEPSFIICTIIS
Trigger: GGAGATGATGGTGCAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp ATTCATAGCAGAGAAACTGAGAGGAGAGACAAGAGTAGGGTGTCCTaGGTCCAAAGGCTACCTTCAGAATTCCTGGGCTCTGGCTTCATC +
Preference number: 1 (lower is better)
Translates to: IHSRETERRDKSRVS*VQRLPSEFLGSGFI
Trigger: GATGAAGCCAGAGCCCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCCTCTCAGTTTCTCTGCTATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp TTCACACATACTGACTGTGAGCAGAGCATCTTGGCTGGTGTGCCATaGCCTATTACAGGTGTGCAAAATATTGATCCCCTTCTCCCACAG +
Preference number: 1 (lower is better)
Translates to: FTHTDCEQSILAGVP*PITGVQNIDPLLPQ
Trigger: CTGTGGGAGAAGGGGATCAATATTTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp ACGCACCAGGGATCTTCACACATACTGACTGTGAGCAGAGCATCTTaGCTGGTGTGCCATGGCCTATTACAGGTGTGCAAAATATTGATC +
Preference number: 1 (lower is better)
Translates to: THQGSSHILTVSRAS*LVCHGLLQVCKILI
Trigger: GATCAATATTTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAAGATCCCTGGTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GTGAGAAATATAAGCTGGTCAGTTCCTTTTGGAGAGTGGGAATACTaGGCATGGCTGCTTCTTCTGCTGAGGCTGCTTGGAGTGATACAG +
Preference number: 1 (lower is better)
Translates to: VRNISWSVPFGEWEY*AWLLLLLRLLGVIQ
Trigger: CTGTATCACTCCAAGCAGCCTCAGCAGAAGAAGCAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp TTTCAGGAAGGGTATGCATCCATTTGTCCATTTAGGCACAAGCTATaGCCAGCAGAAGGTTTCCTGCTTTGCTTACAGGCTGAGATGTGG +
Preference number: 1 (lower is better)
Translates to: FQEGYASICPFRHKL*PAEGFLLCLQAEMW
Trigger: CCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTGGGCATAGCTTGTGCCTAAATGGACAAATGGATGCATACCCTTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp CAGAAAGAACATTTTCCAACACTCCATTTGGAGAGTGTGTCTACATaGCTGAGAGCCACAACTCTGACAGAGACCCACACAGCACTGTCA +
Preference number: 1 (lower is better)
Translates to: QKEHFPTLHLESVST*LRATTLTETHTALS
Trigger: TGACAGTGCTGTGTGGGTCTCTGTCAGAGTTGTGGCTCTCAGCCATGTAGACACACTCTCCAAATGGAGTGTTGGAAAATGTTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp AATATAAGCTGGTCAGTTCCTTTTGGAGAGTGGGAATACTGGGCATaGCTGCTTCTTCTGCTGAGGCTGCTTGGAGTGATACAGAAGGAA +
Preference number: 1 (lower is better)
Translates to: NISWSVPFGEWEYWA*LLLLLRLLGVIQKE
Trigger: TTCCTTCTGTATCACTCCAAGCAGCCTCAGCAGAAGAAGCAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp CTGCAGTTCAGCGTTAACTGTAGTGTCTGTGCTGGAATTGTCTCCTaGGCTACACAAGAGCAGACATTATGCACATCTTCTACTTTGGGG +
Preference number: 1 (lower is better)
Translates to: LQFSVNCSVCAGIVS*ATQEQTLCTSSTLG
Trigger: CCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGCACAGACACTACAGTTAACGCTGAACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp GGTGAAGCAGTGAAGAATAGCAGTTCTGCACCCAGCCCCTGGAGTTaGATCCTGGCTTTTCTATTTACTAGGATGAGCTACTGTGATTCA +
Preference number: 1 (lower is better)
Translates to: GEAVKNSSSAPSPWS*ILAFLFTRMSYCDS
Trigger: TGAATCACAGTAGCTCATCCTAGTAAATAGAAAAGCCAGGATTCAACTCCAGGGGCTGGGTGCAGAACTGCTATTCTTCACTGCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp CCCACACAGCACTGTCATCTGTGTTTGGACTTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCAGACAAAGGGATGAGTGTGCTTATA +
Preference number: 1 (lower is better)
Translates to: PTQHCHLCLDLLSLL*PAQRFPDKGMSVLI
Trigger: TATAAGCACACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAAGTCCAAACACAGATGACAGTGCTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp AGAGTGGGAATACTGGGCATGGCTGCTTCTTCTGCTGAGGCTGCTTaGAGTGATACAGAAGGAAATCTTGGCCAGAAAGAAAATCCTATA +
Preference number: 1 (lower is better)
Translates to: RVGILGMAASSAEAA*SDTEGNLGQKENPI
Trigger: TATAGGATTTTCTTTCTGGCCAAGATTTCCTTCTGTATCACTCCAAGCAGCCTCAGCAGAAGAAGCAGCCATGCCCAGTATTCCCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp TGGTTGGATTATACCCAGTTCCCCAGAAGTGTGAGAAATATAAGCTaGTCAGTTCCTTTTGGAGAGTGGGAATACTGGGCATGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: WLDYTQFPRSVRNIS*SVPFGEWEYWAWLL
Trigger: AAGCAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATTTCTCACACTTCTGGGGAACTGGGTATAATCCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GCACTCTGCCTCAGCTTAAACTCTAGTTCTCTGAGTCTTTGGAACTaGGATGAACCCAGTTTCATCATCTGCACCATCATCTCCCAAGTT +
Preference number: 1 (lower is better)
Translates to: ALCLSLNSSSLSLWN*DEPSFIICTIISQV
Trigger: AACTTGGGAGATGATGGTGCAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp TCTCCTGAGCTACACAAGAGCAGACATTATGCACATCTTCTACTTTaGGGCCTTGCAGCTCCTAACATAGTGCTAATGGTAGTTGGTGCT +
Preference number: 1 (lower is better)
Translates to: SPELHKSRHYAHLLL*GLAAPNIVLMVVGA
Trigger: AGCACCAACTACCATTAGCACTATGTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTGTGTAGCTCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 90 bp ACAGCACTGTCATCTGTGTTTGGACTTACTAAGCCTGTTATGCCCTaGACAAAGATTCCCAGACAAAGGGATGAGTGTGCTTATATGCAG +
Preference number: 1 (lower is better)
Translates to: TALSSVFGLTKPVMP*TKIPRQRDECAYMQ
Trigger: CTGCATATAAGCACACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAAGTCCAAACACAGATGACAGTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp TCCATCCCAAACCCAGAGACTTGTACAGGGCTGTTGAGAACTGTCTaGGCAATCAGCCAGCAACAGTTAATAATTATCATCCATTCCTTT +
Preference number: 1 (lower is better)
Translates to: SIPNPETCTGLLRTV*AISQQQLIIIIHSF
Trigger: AAAGGAATGGATGATAATTATTAACTGTTGCTGGCTGATTGCCCAGACAGTTCTCAACAGCCCTGTACAAGTCTCTGGGTTTGGGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp AAGATGTTTGGGAATGAGTCTTCAACGCATCCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAACGCAGCCTGTTCAGTGTCACTTTGG +
Preference number: 1 (lower is better)
Translates to: KMFGNESSTHPQSEE*FYFRINAACSVSLW
Trigger: CCAAAGTGACACTGAACAGGCTGCGTTTATCCTAAAATAAAACCACTCCTCACTCTGTGGATGCGTTGAAGACTCATTCCCAAACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp CTTTATGTAATAGCAACCCAGGTAACACGTGATAAAGCAATGATCTaGGGGAGTGAGCATGTAGAGGGAAGGTGTATTAGAGAATTAGGC +
Preference number: 1 (lower is better)
Translates to: LYVIATQVTRDKAMI*GSEHVEGRCIRELG
Trigger: GCCTAATTCTCTAATACACCTTCCCTCTACATGCTCACTCCCTCAGATCATTGCTTTATCACGTGTTACCTGGGTTGCTATTACATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp GCCAAATGCTGTAAAAGTATAAATAGAGGGCAATATATTTCGCTTTaGACGGGAGGTTTTAGAAGGCCGCACAAGAGGGATATTCAGTCT +
Preference number: 1 (lower is better)
Translates to: AKCCKSINRGQYISL*TGGFRRPHKRDIQS
Trigger: AGACTGAATATCCCTCTTGTGCGGCCTTCTAAAACCTCCCGTCCAAAGCGAAATATATTGCCCTCTATTTATACTTTTACAGCATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 90 bp ACTGGCACACTTTGGTCTGATACAAGATCCTGTTCCATGATGCTTTaGTTTTATAGACCTCTTGGTCACAGTCTAGTTCATCTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: TGTLWSDTRSCSMML*FYRPLGHSLVHLES
Trigger: ACTTTCCAGATGAACTAGACTGTGACCAAGAGGTCTATAAAATCAAAGCATCATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 90 bp TCCAAAATGCATATAGAGAGCTCTATCCAACCTTCTTTAATTAAATaGGCATTTTCAGCAGGAAAGTTGAGTGGTTATCCAGATAGCAAT +
Preference number: 1 (lower is better)
Translates to: SKMHIESSIQPSLIK*AFSAGKLSGYPDSN
Trigger: ATTGCTATCTGGATAACCACTCAACTTTCCTGCTGAAAATGCCCATTTAATTAAAGAAGGTTGGATAGAGCTCTCTATATGCATTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTGGGGCATGCCAGGGTaGCGGCACTCTGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACWGMPG*RHSASA
Trigger: AGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATCTGTTTGTGGGGCATaGCAGGGTGGCGGCACTCTG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSVCGA*QGGGTL
Trigger: CAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTGGTGATCTGTTTGTaGGGCATGCCAGGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLVICL*GMPGWR
Trigger: CCGCCACCCTGGCATGCCCCACAAACAGATCACCAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTGAATACACCCCACTaGTCCAGGCCCCTGCTCATT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLNTPH*SRPLLI
Trigger: AATGAGCAGGGGCCTGGATCAGTGGGGTGTATTCAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 90 bp GGGAAGGGCTGCATCTGCCTCAAGCGAAGGGTACATTTTCCTAATTaGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACA +
Preference number: 2 (lower is better)
Translates to: GKGCICLKRRVHFPN*LKMRGEGHAPGIFT
Trigger: TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTTCCTTCTGGAGAATaGCTCTGCTTCTTGCAAGGT +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVPSGE*LCFLQG
Trigger: ACCTTGCAAGAAGCAGAGTCATTCTCCAGAAGGAAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAGGGTGGCGGCACTCTaGCTCAGCTTAAACTCTAGT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRRVAAL*LSLNSS
Trigger: ACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCACCCT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGTGCATCTGGAGAGGTaGTCTGAATACACCCCACTG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRVHLER*SEYTPL
Trigger: CAGTGGGGTGTATTCAGAGCACCTCTCCAGATGCAC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATGTGAGCATGCATGGTaGATCTGGAGAGGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRCEHAW*IWRGAL
Trigger: CAGAGCACCTCTCCAGATGCACCATGCATGCTCACA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCTTCTCCCTCCAAAGTaGCTTTACACTAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACLLPPK*LYTRNS
Trigger: GCTGTTCCTAGTGTAAAGGCACTTTGGAGGGAGAAG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCATGCATGGTGCATCTaGAGAGGTGCTCTGAATACA +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACHAWCI*RGALNT
Trigger: TGTATTCAGAGCACCTCTCCAGATGCACCATGCATG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTGCACGTCTCTTCTTaGGGTGCTGTCTTTCACCTC +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLHVSS*GAVFHL
Trigger: GAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATGCAGCCCACATTCTaGTCTCCAAGCCATGCACTC +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWMQPTF*SPSHAL
Trigger: GAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAGGGTGGCGGCACTCTaGCTCAGCTTAAACTCTAGT +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWRVAAL*LSLNSS
Trigger: ACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCACCCT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGTGCATCTGGAGAGGTaGTCTGAATACACCCCACTG +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWVHLER*SEYTPL
Trigger: CAGTGGGGTGTATTCAGAGCACCTCTCCAGATGCAC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGCCCCTTCCTGCCTGTaGCCGATTTCCAAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHAPSCL*PISKLA
Trigger: GGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGTTCCTTTTGGAGAGTaGGAATACTGGGCATGGCTG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRVPFGE*EYWAWL
Trigger: CAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAAC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCATGCTTCTCTCACTTaGAGGCCCTCTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWHASLT*RPSVFL
Trigger: GAGGAAGACAGAGGGCCTCCAAGTGAGAGAAGCATG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTGCAGCTTCCAGAAGTaGGCAATCTTGCTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACCSFQK*AILLVY
Trigger: ATAAACAAGCAAGATTGCTCACTTCTGGAAGCTGCA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATGCCCAGCTGCATCCTaGTATTTAATGCTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRCPAAS*YLMLAR
Trigger: TCTGGCAAGCATTAAATATCAGGATGCAGCTGGGCA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACATTCCTGACCTCAAGTaGTCCGCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINIPDLK*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAAT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGAAGGTTTCCTGCTTTaGTTACAGGCTGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTREGFLL*LQAEMW
Trigger: CCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGCCACCGTGCCCAGCTaGATCCTGATATTTAATGCT +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWATVPS*ILIFNA
Trigger: AGCATTAAATATCAGGATGCAGCTGGGCACGGTGGC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGCACATCTTCTACTTTaGGGCCTTGCAGCTCCTAAC +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWAHLLL*GLAAPN
Trigger: GTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGGGTTTTGCCATGCTaGCCAGGATCCTCTCAAATT +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGVLPC*PGSSQI
Trigger: AATTTGAGAGGATCCTGGCCAGCATGGCAAAACCCC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATCACCTCCTTACAACTaGTTAGGTGCTTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSPPYN*LGASAD
Trigger: GTCAGCTGAAGCACCTAACCAGTTGTAAGGAGGTGA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGCTCAAGATGCGTGGTaGAGGCCACGCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLAQDAW*RPRTRD
Trigger: ATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTTCCTCCATCCTTTATaGCCAAGCCTCTTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWFLHPL*PSLFPP
Trigger: AGGAGGAAAGAGGCTTGGTCATAAAGGATGGAGGAA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCAGCAGAAGGTTTCCTaGTTTGCTTACAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWQQKVS*FAYRLR
Trigger: TCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTTTAGGCACAAGCTATaGCCAGCAGAAGGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWFRHKL*PAEGFL
Trigger: CAGGAAACCTTCTGCTGGGCATAGCTTGTGCCTAAA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGACAGGCCCCTTCCTaGCTGTGCCCGATTTCCAAG +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHRQAPS*LCPISK
Trigger: CTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTCCCAAGTTCCTTCTaGAGAATGACTCTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLPSSF*RMTLLL
Trigger: AAGAAGCAGAGTCATTCTCCAGAAGGAACTTGGGAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAGTTCTCTGAGTCTTTaGAACTGGGATGAACCCAGT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSSLSL*NWDEPS
Trigger: ACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 90 bp CACGCACCAGGGATCTTCACACATACTGACTGTGAGCAGAGCATCTaGGCTGGTGTGCCATGGCCTATTACAGGTGTGCAAAATATTGAT +
Preference number: 2 (lower is better)
Translates to: HAPGIFTHTDCEQSI*AGVPWPITGVQNID
Trigger: ATCAATATTTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAAGATCCCTGGTGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 90 bp ATCCTTTATGACCAAGCCTCTTTCCTCCTTCCTGCACGTCTCTTCTaGGGGTGCTGTCTTTCACCTCCTTACAACTGGTTAGGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: ILYDQASFLLPARLF*GCCLSPPYNWLGAS
Trigger: TGAAGCACCTAACCAGTTGTAAGGAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAGGCTTGGTCATAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAGGTGTGCAAAATATTaGTCCCCTTCTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWRCAKY*SPSPTV
Trigger: AACTGTGGGAGAAGGGGATCAATATTTTGCACACCT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACATAGGCAAGGGACTGTaGGCATGCATGGTGCATCTG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINIGKGL*ACMVHL
Trigger: CAGATGCACCATGCATGCTCACAGTCCCTTGCCTAT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAACTAGGAACAGCCTCTaGTGTATGCATCCTGATATT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRTRNSL*CMHPDI
Trigger: AATATCAGGATGCATACATCAGAGGCTGTTCCTAGT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAAAGATGTTTGGGAATaGGTCTTCAACGCATCCACA +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRKDVWE*VFNAST
Trigger: TGTGGATGCGTTGAAGACTCATTCCCAAACATCTTT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATGAGTGTGCTTATATaGAGCCCACATTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWMSVLI*SPHSAL
Trigger: GAGAGCAGAATGTGGGCTGCATATAAGCACACTCAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGTTCATGCTATTACTTaGAGCTGCAGTTCAGCGTTA +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRVHAIT*SCSSAL
Trigger: TAACGCTGAACTGCAGCTGCAAGTAATAGCATGAAC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTGTGAGCATGCATGGTaGATCTGGAGAGGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINCEHAW*IWRGAL
Trigger: CAGAGCACCTCTCCAGATGCACCATGCATGCTCACA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGATGGGGTTTTGCCATaGTGGCCAGGATCCTCTCAA +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINDGVLP*WPGSSQ
Trigger: TTGAGAGGATCCTGGCCAGCATGGCAAAACCCCATC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCTCTTTCCTCCTTCCTaGACGTCTCTTCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLFPPS*TSLLGV
Trigger: CACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTGGTGATCTGTTTGTaGGGCATGCCAGGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLVICL*GMPGWR
Trigger: CCGCCACCCTGGCATGCCCCACAAACAGATCACCAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGCTGGAATTGTCTCCTaGGCTACACAAGAGCAGACA +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINAGIVS*ATQEQT
Trigger: TGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACTGAATACACCCCACTaGTCCAGGCCCCTGCTCATT +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLLNTPH*SRPLLI
Trigger: AATGAGCAGGGGCCTGGATCAGTGGGGTGTATTCAG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAAAGATGTTTGGGAATaGGTCTTCAACGCATCCACA +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWKDVWE*VFNAST
Trigger: TGTGGATGCGTTGAAGACTCATTCCCAAACATCTTT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATTGCCAGAATTTGATTaGACCATGCTTATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLPEFD*TMLIGF
Trigger: GAAGCCAATAAGCATGGTGCAATCAAATTCTGGCAA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGTACAGATGGGGTTTTaGCATGCTGGCCAGGATCCT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHVQMGF*HAGQDP
Trigger: AGGATCCTGGCCAGCATGGCAAAACCCCATCTGTAC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTTATTTTTGACAATATaGATAGGGGCATTAGGACAC +
Preference number: 2 (lower is better)
Translates to: CLCPISKLAQPGYSLIACLFLTI*IGALGH
Trigger: GTGTCCTAATGCCCCTATGCATATTGTCAAAAATAA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAAAGCCCAAGGTGTCTaGAGGCAGGACTGTCCTAAC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHKAQGV*RQDCPN
Trigger: GTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGCACATCTTCTACTTTaGGGCCTTGCAGCTCCTAAC +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINAHLLL*GLAAPN
Trigger: GTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGACTGTGAGCATGCATaGTGCATCTGGAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHDCEHA*CIWRGA
Trigger: AGCACCTCTCCAGATGCACCATGCATGCTCACAGTC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGGGGTTTTGCCATGCTaGCCAGGATCCTCTCAAATT +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINGVLPC*PGSSQI
Trigger: AATTTGAGAGGATCCTGGCCAGCATGGCAAAACCCC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAAAACTGGCACACTTTaGTCTGATACAAGATCCTGT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRKTGTL*SDTRSC
Trigger: ACAGGATCTTGTATCAGACCAAAGTGTGCCAGTTTT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAAGAAGTGCTCTCTGTaGACACGGCCCAAACCAGAC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHKKCSL*TRPKPD
Trigger: GTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTCTT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTTTCTACATGTGCTATaGTGGGAAGAAGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWFLHVL*WEEVWE
Trigger: TTCCCAAACTTCTTCCCATCATAGCACATGTAGAAA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCTCAAGATGCGTGGTaGAGGCCACGCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFAQDAW*RPRTRD
Trigger: ATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTTAGGTGCTTCAGCTaGCCTCTTAGTTGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVRCFS*PLSWSA
Trigger: GGCAGACCAACTAAGAGGTCAGCTGAAGCACCTAAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATGTTCCATGATGCTTTaGTTTTATAGACCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRCSMML*FYRPLG
Trigger: ACCAAGAGGTCTATAAAATCAAAGCATCATGGAACA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACAAGATCCTGTTCCATaGTGCTTTGATTTTATAGAC +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRQDPVP*CFDFID
Trigger: GTCTATAAAATCAAAGCATCATGGAACAGGATCTTG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGAAGGTTTCCTGCTTTaGTTACAGGCTGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINEGFLL*LQAEMW
Trigger: CCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGGCCTATTACAGGTGTaGAAAATATTGATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTGLLQV*KILIPF
Trigger: GAAGGGGATCAATATTTTGCACACCTGTAATAGGCC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGCCACCGTGCCCAGCTaGATCCTGATATTTAATGCT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHATVPS*ILIFNA
Trigger: AGCATTAAATATCAGGATGCAGCTGGGCACGGTGGC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAAAAGCCCAAGGTGTCTaGAGGCAGGACTGTCCTAAC +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLKAQGV*RQDCPN
Trigger: GTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGACTGTGAGCATGCATaGTGCATCTGGAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLDCEHA*CIWRGA
Trigger: AGCACCTCTCCAGATGCACCATGCATGCTCACAGTC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACATAATTCTGTGTGGCTaGAGCCTTAGGGAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHIILCG*SLREQA
Trigger: TGCCTGCTCCCTAAGGCTCCAGCCACACAGAATTAT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 90 bp ACTTGCAGCTGCAGTTCAGCGTTAACTGTAGTGTCTGTGCTGGAATaGTCTCCTGAGCTACACAAGAGCAGACATTATGCACATCTTCTA +
Preference number: 2 (lower is better)
Translates to: TCSCSSALTVVSVLE*SPELHKSRHYAHLL
Trigger: TAGAAGATGTGCATAATGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGCACAGACACTACAGTTAACGCTGAACTGCAGCTGCAAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTCTTTGGAACTGGGATaGACCCAGTTTCATCATCTG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINSLELG*TQFHHL
Trigger: CAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCATTCCTGACCTCAAGTaGTCCGCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFIPDLK*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAAT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCAGCAGAAGGTTTCCTaGTTTGCTTACAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHQQKVS*FAYRLR
Trigger: TCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTAAGCCTGTTATGCCCTaGACAAAGATTCCCAGACAA +
Preference number: 2 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSKPVMP*TKIPRQ
Trigger: TTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTTTATCTGCCTAATTaGAGCCCATTGCTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLYLPN*SPLLSS
Trigger: GCTGGACAGCAATGGGCTGCAATTAGGCAGATAAAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACTGATCCAGGCCCCTaGTCATTTTTCATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTDPGP*SFFMLL
Trigger: GAGAAGCATGAAAAATGAGCAGGGGCCTGGATCAGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTGATATTTAATGCTTaGCAGAATTTGATTGCACCA +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLIFNA*QNLIAP
Trigger: TGGTGCAATCAAATTCTGGCAAGCATTAAATATCAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGATGGGGTTTTGCCATaGTGGCCAGGATCCTCTCAA +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSDGVLP*WPGSSQ
Trigger: TTGAGAGGATCCTGGCCAGCATGGCAAAACCCCATC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATTATTTTTGACAATATaGATAGGGGCATTAGGACAC +
Preference number: 2 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLFLTI*IGALGH
Trigger: GTGTCCTAATGCCCCTATGCATATTGTCAAAAATAA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGAGAGTGTGTCTACATaGCTGAGAGCCACAACTCTG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLESVST*LRATTL
Trigger: CAGAGTTGTGGCTCTCAGCCATGTAGACACACTCTC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTTCCAACACTCCATTTaGAGAGTGTGTCTACATGGC +
Preference number: 2 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSFQHSI*RVCLHG
Trigger: GCCATGTAGACACACTCTCCAAATGGAGTGTTGGAA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTTCCTTTTGGAGAGTaGGAATACTGGGCATGGCTG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVPFGE*EYWAWL
Trigger: CAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAATGCCTGTGTAAGCTaGCTGGTGATCTGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHNACVS*LVICLW
Trigger: CCACAAACAGATCACCAGCCAGCTTACACAGGCATT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACATGCTTCTCTCACTTaGAGGCCCTCTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSHASLT*RPSVFL
Trigger: GAGGAAGACAGAGGGCCTCCAAGTGAGAGAAGCATG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAAC +
Preference number: 2 (lower is better)
Translates to: GETRVGCPESKGYLQNSWPQSEE*FYFRIN
Trigger: GTTTATCCTAAAATAAAACCACTCCTCACTCTGTGG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCCCGATTTCCAAGCTaGCCCAACCAGGCTATTCCC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFARFPS*PNQAIP
Trigger: GGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTGCAGCTTCCAGAAGTaGGCAATCTTGCTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSCSFQK*AILLVY
Trigger: ATAAACAAGCAAGATTGCTCACTTCTGGAAGCTGCA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACATGCTTGCCAGAATTTaGTTGCACCATGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINMLARI*LHHAYW
Trigger: CCAATAAGCATGGTGCAATCAAATTCTGGCAAGCAT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGAATGTTTATGACCTaGAACCCCTGCCTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHRMFMT*NPCLSK
Trigger: TTTGGACAGGCAGGGGTTTCAGGTCATAAACATTCT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGCTTCATCCCAGGTTTaGTCTTCTGGAAGACCTAAC +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLASSQV*SSGRPN
Trigger: GTTAGGTCTTCCAGAAGAGCAAACCTGGGATGAAGC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGTTCTCTGAGTCTTTaGAACTGGGATGAACCCAGT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSSLSL*NWDEPS
Trigger: ACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACATGCATGGTGCATCTaGAGAGGTGCTCTGAATACA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLHAWCI*RGALNT
Trigger: TGTATTCAGAGCACCTCTCCAGATGCACCATGCATG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAACATGTAAATGGACATaGGGTGAGGGCACACATCTG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLTCKWT*GEGTHL
Trigger: CAGATGTGTGCCCTCACCCCATGTCCATTTACATGT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACAAGGAAAGCAAGTTaGGAGGTCAGAAACAGACCT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTRKAS*EVRNRP
Trigger: AGGTCTGTTTCTGACCTCCCAACTTGCTTTCCTTGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGTTCCTTCTGGAGAATaGCTCTGCTTCTTGCAAGGT +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSVPSGE*LCFLQG
Trigger: ACCTTGCAAGAAGCAGAGTCATTCTCCAGAAGGAAC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATCTTTGGAACTGGGATaGACCCAGTTTCATCATCTG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLSLELG*TQFHHL
Trigger: CAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACTAGGAACAGCCTCTaGTGTATGCATCCTGATATT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTRNSL*CMHPDI
Trigger: AATATCAGGATGCATACATCAGAGGCTGTTCCTAGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCCTCCCAGGTTCAAGTaGTTCTGTTGCCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFPPRFK*FCCLSF
Trigger: GAAGCTGAGGCAACAGAATCACTTGAACCTGGGAGG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAAAGCCTGTTATGCCCTaGACAAAGATTCCCAGACAA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLKPVMP*TKIPRQ
Trigger: TTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTTTATCTGCCTAATTaGAGCCCATTGCTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLYLPN*SPLLSS
Trigger: GCTGGACAGCAATGGGCTGCAATTAGGCAGATAAAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACTGATGTCTTTATCTaGCTAATTGCAGCCCATTGC +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTDVFI*LIAAHC
Trigger: GCAATGGGCTGCAATTAGGCAGATAAAGACATCAGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCAAGAGCAGACATTATaGACATCTTCTACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHQEQTL*TSSTLG
Trigger: CCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTTGCCAGAATTTGATTaGACCATGCTTATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLPEFD*TMLIGF
Trigger: GAAGCCAATAAGCATGGTGCAATCAAATTCTGGCAA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGTACAGATGGGGTTTTaGCATGCTGGCCAGGATCCT +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFVQMGF*HAGQDP
Trigger: AGGATCCTGGCCAGCATGGCAAAACCCCATCTGTAC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTTCTCCCTCCAAAGTaGCTTTACACTAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLLPPK*LYTRNS
Trigger: GCTGTTCCTAGTGTAAAGGCACTTTGGAGGGAGAAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTCTTTCCTCCTTCCTaGACGTCTCTTCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLFPPS*TSLLGV
Trigger: CACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTTTCTACATGTGCTATaGTGGGAAGAAGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHFLHVL*WEEVWE
Trigger: TTCCCAAACTTCTTCCCATCATAGCACATGTAGAAA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAATGATTCTTCCTCATTaGGGAGAGTTAATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLMILPH*GELMPV
Trigger: CACAGGCATTAACTCTCCTCAATGAGGAAGAATCAT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAATGCTTGCCAGAATTTaGTTGCACCATGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLMLARI*LHHAYW
Trigger: CCAATAAGCATGGTGCAATCAAATTCTGGCAAGCAT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCAGATAACGTGTTCATaGATCAGGAGATTCATAGCA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHQITCS*IRRFIA
Trigger: TGCTATGAATCTCCTGATTCATGAACACGTTATCTG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCAAGATCCTGTTCCATaGTGCTTTGATTTTATAGAC +
Preference number: 2 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINQDPVP*CFDFID
Trigger: GTCTATAAAATCAAAGCATCATGGAACAGGATCTTG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATGGCACACTTTGGTCTaGTACAAGATCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSWHTLV*YKILFH
Trigger: ATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTTCTATTTACTAGGATaGGCTACTGTGATTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHFYLLG*ATVIQP
Trigger: AGGCTGAATCACAGTAGCTCATCCTAGTAAATAGAA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGGCCTATTACAGGTGTaGAAAATATTGATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLGLLQV*KILIPF
Trigger: GAAGGGGATCAATATTTTGCACACCTGTAATAGGCC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLLLSLL*PAQRFP
Trigger: TGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTTCATGCTATTACTTaGAGCTGCAGTTCAGCGTTA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVHAIT*SCSSAL
Trigger: TAACGCTGAACTGCAGCTGCAAGTAATAGCATGAAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTGCTCAGTTGTGAATaGTTCTTCCTCATTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLLSCE*FFLIEE
Trigger: CTCCTCAATGAGGAAGAATCATTCACAACTGAGCAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTAGTTGGTGCTAGATaGGTCTATGGATTCATTTAC +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVVGAR*VYGFIY
Trigger: GTAAATGAATCCATAGACTCATCTAGCACCAACTAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACAGATAACGTGTTCATaGATCAGGAGATTCATAGCA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLQITCS*IRRFIA
Trigger: TGCTATGAATCTCCTGATTCATGAACACGTTATCTG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACAGAGCCCACATTTATaGCCACTCATTATATTTCCT +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLQSPHL*PLIIFP
Trigger: AGGAAATATAATGAGTGGTCATAAATGTGGGCTCTG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATTTTCTGACTGTTCATaGTATTACTTGCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLFSDCS*YYLQLQ
Trigger: CTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCTTCATCCCAGGTTTaGTCTTCTGGAAGACCTAAC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFASSQV*SSGRPN
Trigger: GTTAGGTCTTCCAGAAGAGCAAACCTGGGATGAAGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTCACCTCCTTACAACTaGTTAGGTGCTTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFSPPYN*LGASAD
Trigger: GTCAGCTGAAGCACCTAACCAGTTGTAAGGAGGTGA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTCATTTGCAAAGATTTaGCCATTTTCCAGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSFAKI*PFSSLR
Trigger: TCTGAGACTGGAAAATGGCCAAATCTTTGCAAATGA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTGGCACACTTTGGTCTaGTACAAGATCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFWHTLV*YKILFH
Trigger: ATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTCCCAAGTTCCTTCTaGAGAATGACTCTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLPSSF*RMTLLL
Trigger: AAGAAGCAGAGTCATTCTCCAGAAGGAACTTGGGAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTGAGTCTTTGGAACTaGGATGAACCCAGTTTCATC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLSLWN*DEPSFI
Trigger: GATGAAACTGGGTTCATCCCAGTTCCAAAGACTCAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCATGATTCTTCCTCATTaGGGAGAGTTAATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFMILPH*GELMPV
Trigger: CACAGGCATTAACTCTCCTCAATGAGGAAGAATCAT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCA +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLLSLL*PAQRFP
Trigger: TGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCACTGATGTCTTTATCTaGCTAATTGCAGCCCATTGC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFTDVFI*LIAAHC
Trigger: GCAATGGGCTGCAATTAGGCAGATAAAGACATCAGT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACTGATATTTAATGCTTaGCAGAATTTGATTGCACCA +
Preference number: 2 (lower is better)
Translates to: VFPAFQICQGIHMSALVLLIFNA*QNLIAP
Trigger: TGGTGCAATCAAATTCTGGCAAGCATTAAATATCAG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGTAGTTGGTGCTAGATaGGTCTATGGATTCATTTAC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFVVGAR*VYGFIY
Trigger: GTAAATGAATCCATAGACTCATCTAGCACCAACTAC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGTGAGAAATATAAGCTaGTCAGTTCCTTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFVRNIS*SVPFGE
Trigger: CTCTCCAAAAGGAACTGACCAGCTTATATTTCTCAC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTAAGAATCATGAGCTaGAACATTCCTCATTTTCTC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLRIMS*NIPHFL
Trigger: GAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAAC +
Preference number: 2 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFPQSEE*FYFRIN
Trigger: GTTTATCCTAAAATAAAACCACTCCTCACTCTGTGG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp TCTGTGGACACGGCCCAAACCAGACAGGCCCCTTCCTaGCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGC +
Preference number: 3 (lower is better)
Translates to: SVDTAQTRQAPS*LCPISKLAQPG
Trigger: GCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCTGGTTTGGGCCGTGTCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp GACACGGCCCAAACCAGACAGGCCCCTTCCTGCCTGTaGCCGATTTCCAAGCTGGCCCAACCAGGCTATTCC +
Preference number: 3 (lower is better)
Translates to: DTAQTRQAPSCL*PISKLAQPGYS
Trigger: GGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCTGGTTTGGGCCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp GTTAATGCCTGTGTAAGCTGGCTGGTGATCTGTTTGTaGGGCATGCCAGGGTGGCGGCACTCTGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: VNACVSWLVICL*GMPGWRHSASA
Trigger: AGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGATCACCAGCCAGCTTACACAGGCATTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCCTGCACGTCTCTTCTaGGGGTGCTGTCTTTCACCT +
Preference number: 3 (lower is better)
Translates to: CLCPISKLAQPGYSLIACPARLF*GCCLSP
Trigger: AGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp TGCTTATATGCAGCCCACATTCTGCTCTCCAAGCCATaGACTCGGGGGAAGGGCTGCATCTGCCTCAAGCGA +
Preference number: 3 (lower is better)
Translates to: CLYAAHILLSKP*TRGKGCICLKR
Trigger: TCGCTTGAGGCAGATGCAGCCCTTCCCCCGAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCATATAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp CAAAGGGATGAGTGTGCTTATATGCAGCCCACATTCTaGTCTCCAAGCCATGCACTCGGGGGAAGGGCTGCA +
Preference number: 3 (lower is better)
Translates to: QRDECAYMQPTF*SPSHALGGRAA
Trigger: TGCAGCCCTTCCCCCGAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCATATAAGCACACTCATCCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp GTAGACAGAAGGGAGAGAAGGGCATCCCAGACAACATaGGCAAAGGCATGGGAGGATTTGGTGGGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: VDRRERRASQTT*AKAWEDLVGVW
Trigger: CCACACACCCACCAAATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGCCCTTCTCTCCCTTCTGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAGTACAGATGGGGTTTaGCCATGCTGGCCAGGATCC +
Preference number: 3 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSTDGV*PCWPGS
Trigger: GGATCCTGGCCAGCATGGCAAAACCCCATCTGTACT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp CTCTCCAAGCCATGCACTCGGGGGAAGGGCTGCATCTaGCTCAAGCGAAGGGTACATTTTCCTAATTTGCTC +
Preference number: 3 (lower is better)
Translates to: LSKPCTRGKGCI*LKRRVHFPNLL
Trigger: GAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCCCCGAGTGCATGGCTTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp GATCTGTTTGTGGGGCATGCCAGGGTGGCGGCACTCTaGCTCAGCTTAAACTCTAGTTCTCTGAGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: DLFVGHARVAAL*LSLNSSSLSLW
Trigger: CCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCAGGTGTGCAAAATATaGATCCCCTTCTCCCACAGT +
Preference number: 3 (lower is better)
Translates to: CLCPISKLAQPGYSLIACQVCKI*IPFSHS
Trigger: ACTGTGGGAGAAGGGGATCAATATTTTGCACACCTG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACCTAATTGCAGCCCATaGCTGTCCAGCCTAGGACTA +
Preference number: 3 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRPNCSP*LSSLGL
Trigger: TAGTCCTAGGCTGGACAGCAATGGGCTGCAATTAGG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp GCATCTGCCTCAAGCGAAGGGTACATTTTCCTAATTTaGTCAAGATGCGTGGTGAAGGCCACGCACCAGGGA +
Preference number: 3 (lower is better)
Translates to: ASASSEGYIFLI*SRCVVKATHQG
Trigger: TCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp TCTTCCTCATTGAGGAGAGTTAATGCCTGTGTAAGCTaGCTGGTGATCTGTTTGTGGGGCATGCCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: SSSLRRVNACVS*LVICLWGMPGW
Trigger: CCACCCTGGCATGCCCCACAAACAGATCACCAGCCAGCTTACACAGGCATTAACTCTCCTCAATGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCGCGGTTTCACAACCTaGGCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINRGFTT*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGCG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGTGTCTGTGCTGGAATaGTCTCCTGAGCTACACAAG +
Preference number: 3 (lower is better)
Translates to: GETRVGCPESKGYLQNSWVSVLE*SPELHK
Trigger: CTTGTGTAGCTCAGGAGACAATTCCAGCACAGACAC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGGAACCTGCCAGTATaGGTGGTTGTAACTCAGTTT +
Preference number: 3 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGNLPV*VVVTQF
Trigger: AAACTGAGTTACAACCACCAATACTGGCAGGTTCCC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTTAGCCGATTATACTaGCTAACACATAAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVSRLY*LTHKGN
Trigger: GTTTCCCTTATGTGTTAGCAAGTATAATCGGCTAAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTAATGCTTGCCAGAATTaGATTGCACCATGCTTATTG +
Preference number: 3 (lower is better)
Translates to: CLCPISKLAQPGYSLIACNACQN*IAPCLL
Trigger: CAATAAGCATGGTGCAATCAAATTCTGGCAAGCATT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp AGAGAAACTGAGAGGAGAGACAAGAGTAGGGTGTCCTaGGTCCAAAGGCTACCTTCAGAATTCCTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: RETERRDKSRVS*VQRLPSEFLGS
Trigger: AGAGCCCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCCTCTCAGTTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp TCAAGCGAAGGGTACATTTTCCTAATTTGCTCAAGATaGGTGGTGAAGGCCACGCACCAGGGATCTTCACAC +
Preference number: 3 (lower is better)
Translates to: SSEGYIFLICSR*VVKATHQGSSH
Trigger: GTGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp TTCTCAGTTGAGTCCCTCAGTAAAGCCCAAGGTGTCTaGAGGCAGGACTGTCCTAACCTACTAGAACTTTCC +
Preference number: 3 (lower is better)
Translates to: FSVESLSKAQGV*RQDCPNLLELS
Trigger: GGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTTACTGAGGGACTCAACTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp GGATCTTCACACATACTGACTGTGAGCAGAGCATCTTaGCTGGTGTGCCATGGCCTATTACAGGTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GSSHILTVSRAS*LVCHGLLQVCK
Trigger: TTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACACTGTCATCTGTGTTaGGACTTACTAAGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRHCHLC*DLLSLL
Trigger: TAACAGGCTTAGTAAGTCCAAACACAGATGACAGTG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp ATGCCCAGCAGAAGGTTTCCTGCTTTGCTTACAGGCTaGGATGTGGCAGTTTGCAATCTCCCAGTAAGAGTT +
Preference number: 3 (lower is better)
Translates to: MPSRRFPALLTG*DVAVCNLPVRV
Trigger: AACTCTTACTGGGAGATTGCAAACTGCCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp TGTTATGCCCTGCACAAAGATTCCCAGACAAAGGGATaGGTGTGCTTATATGCAGCCCACATTCTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: CYALHKDSQTKG*VCLYAAHILLS
Trigger: GGAGAGCAGAATGTGGGCTGCATATAAGCACACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp GGGCCACATGGCAGAGTACAAGTGCATGGCCCTTGGTaGCAAGAAGTCTTGAATTCAAATACTGTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GPHGRVQVHGPW*QEVLNSNTVFP
Trigger: TGGGAAGACAGTATTTGAATTCAAGACTTCTTGTCACCAAGGGCCATGCACTTGTACTCTGCCATGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCCTAATTGCAGCCCATaGCTGTCCAGCCTAGGACTA +
Preference number: 3 (lower is better)
Translates to: LIANMTPSFWNTVSGICHPNCSP*LSSLGL
Trigger: TAGTCCTAGGCTGGACAGCAATGGGCTGCAATTAGG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTGGGGTTTCACCATGTaGGCCAGACTAATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINWGFTM*ARLISN
Trigger: GTTCGAGATTAGTCTGGCCAACATGGTGAAACCCCA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACCTGCACGTCTCTTCTaGGGGTGCTGTCTTTCACCT +
Preference number: 3 (lower is better)
Translates to: VFPAFQICQGIHMSALVLPARLF*GCCLSP
Trigger: AGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGCTGGTCAGTTCCTTTaGGAGAGTGGGAATACTGGG +
Preference number: 3 (lower is better)
Translates to: VFPAFQICQGIHMSALVLAGQFL*ESGNTG
Trigger: CCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCGCGGTTTCACAACCTaGGCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFRGFTT*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGCG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp GTGAAGAATAGCAGTTCTGCACCCAGCCCCTGGAGTTaGATCCTGGCTTTTCTATTTACTAGGATGAGCTAC +
Preference number: 3 (lower is better)
Translates to: VKNSSSAPSPWS*ILAFLFTRMSY
Trigger: GTAGCTCATCCTAGTAAATAGAAAAGCCAGGATTCAACTCCAGGGGCTGGGTGCAGAACTGCTATTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp CATATAGAGAAGTTGGAATTGACAGGACCTATTCTCTaGCTAGATGTAGAGGGGATCTGGGGTGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: HIEKLELTGPIL*LDVEGIWGDRE
Trigger: CTCCCTGTCACCCCAGATCCCCTCTACATCTAGTCAGAGAATAGGTCCTGTCAATTCCAACTTCTCTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp CACATACTGACTGTGAGCAGAGCATCTTGGCTGGTGTaGCATGGCCTATTACAGGTGTGCAAAATATTGATC +
Preference number: 3 (lower is better)
Translates to: HILTVSRASWLV*HGLLQVCKILI
Trigger: GATCAATATTTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp GATATTTGTGGTCCACCTATTATGTGTCAAGCAAAGTaGCAGGTGTGTGTACACCTAAGGCCAAGTACCAGG +
Preference number: 3 (lower is better)
Translates to: DICGPPIMCQAK*QVCVHLRPSTR
Trigger: CCTGGTACTTGGCCTTAGGTGTACACACACCTGGCACTTTGCTTGACACATAATAGGTGGACCACAAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp CTCTGCCTCAGCTTAAACTCTAGTTCTCTGAGTCTTTaGAACTGGGATGAACCCAGTTTCATCATCTGCACC +
Preference number: 3 (lower is better)
Translates to: LCLSLNSSSLSL*NWDEPSFIICT
Trigger: GGTGCAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGGGAACCTGCCAGTATaGGTGGTTGTAACTCAGTTT +
Preference number: 3 (lower is better)
Translates to: LIANMTPSFWNTVSGICHGNLPV*VVVTQF
Trigger: AAACTGAGTTACAACCACCAATACTGGCAGGTTCCC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTGAGATGTGGCAGTTaGCAATCTCCCAGTAAGAGT +
Preference number: 3 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLRCGS*QSPSKS
Trigger: ACTCTTACTGGGAGATTGCAAACTGCCACATCTCAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTAGTGAGCAATCTTGCTaGTTTATCCCAGTGTGCCAT +
Preference number: 3 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSSEQSC*FIPVCH
Trigger: ATGGCACACTGGGATAAACAAGCAAGATTGCTCACT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGCTGGTCAGTTCCTTTaGGAGAGTGGGAATACTGGG +
Preference number: 3 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSAGQFL*ESGNTG
Trigger: CCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTGTCTGTGCTGGAATaGTCTCCTGAGCTACACAAG +
Preference number: 3 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVSVLE*SPELHK
Trigger: CTTGTGTAGCTCAGGAGACAATTCCAGCACAGACAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp TTCCCGAACTTTGCCATGCACAGGCACATTCCTGTATaGGCAACACCTCATTTAATCCCCACATCAACCTTA +
Preference number: 3 (lower is better)
Translates to: FPNFAMHRHIPV*ATPHLIPTSTL
Trigger: TAAGGTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATGGCAAAGTTCGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp TCATCTGTGTTTGGACTTACTAAGCCTGTTATGCCCTaGACAAAGATTCCCAGACAAAGGGATGAGTGTGCT +
Preference number: 3 (lower is better)
Translates to: SSVFGLTKPVMP*TKIPRQRDECA
Trigger: AGCACACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAAGTCCAAACACAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp CACTGTCATCTGTGTTTGGACTTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCAGACAAAGGGATGAGT +
Preference number: 3 (lower is better)
Translates to: HCHLCLDLLSLL*PAQRFPDKGMS
Trigger: ACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAAGTCCAAACACAGATGACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp CCCTGCCCCCTCATAAGGTATTTTTCTGACTGTTCATaGTATTACTTGCAGCTGCAGTTCAGCGTTAACTGT +
Preference number: 3 (lower is better)
Translates to: PCPLIRYFSDCS*YYLQLQFSVNC
Trigger: ACAGTTAACGCTGAACTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAAATACCTTATGAGGGGGCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp GGGAATGAGTCTTCAACGCATCCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAACGCAGCCTGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: GNESSTHPQSEE*FYFRINAACSV
Trigger: CACTGAACAGGCTGCGTTTATCCTAAAATAAAACCACTCCTCACTCTGTGGATGCGTTGAAGACTCATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACAGGTGTGCAAAATATaGATCCCCTTCTCCCACAGT +
Preference number: 3 (lower is better)
Translates to: VFPAFQICQGIHMSALVLQVCKI*IPFSHS
Trigger: ACTGTGGGAGAAGGGGATCAATATTTTGCACACCTG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp AGCGTTAACTGTAGTGTCTGTGCTGGAATTGTCTCCTaGGCTACACAAGAGCAGACATTATGCACATCTTCT +
Preference number: 3 (lower is better)
Translates to: SVNCSVCAGIVS*ATQEQTLCTSS
Trigger: AGAAGATGTGCATAATGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGCACAGACACTACAGTTAACGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp ATTTGCAAAGATTTGGCCATTTTCCAGTCTCAGAATTaGTCCATCCCAAACCCAGAGACTTGTACAGGGCTG +
Preference number: 3 (lower is better)
Translates to: ICKDLAIFQSQN*SIPNPETCTGL
Trigger: CAGCCCTGTACAAGTCTCTGGGTTTGGGATGGATCAATTCTGAGACTGGAAAATGGCCAAATCTTTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp ATAGCAACCCAGGTAACACGTGATAAAGCAATGATCTaGGGGAGTGAGCATGTAGAGGGAAGGTGTATTAGA +
Preference number: 3 (lower is better)
Translates to: IATQVTRDKAMI*GSEHVEGRCIR
Trigger: TCTAATACACCTTCCCTCTACATGCTCACTCCCTCAGATCATTGCTTTATCACGTGTTACCTGGGTTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp TTGCAGCCCATTGCTGTCCAGCCTAGGACTATTCATTaGGATTTAGGAGTTAGCCGATTATACTTGCTAACA +
Preference number: 3 (lower is better)
Translates to: LQPIAVQPRTIH*DLGVSRLYLLT
Trigger: TGTTAGCAAGTATAATCGGCTAACTCCTAAATCCCAATGAATAGTCCTAGGCTGGACAGCAATGGGCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp AACCCAGAGACTTGTACAGGGCTGTTGAGAACTGTCTaGGCAATCAGCCAGCAACAGTTAATAATTATCATC +
Preference number: 3 (lower is better)
Translates to: NPETCTGLLRTV*AISQQQLIIII
Trigger: GATGATAATTATTAACTGTTGCTGGCTGATTGCCCAGACAGTTCTCAACAGCCCTGTACAAGTCTCTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTGAGATGTGGCAGTTaGCAATCTCCCAGTAAGAGT +
Preference number: 3 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLRCGS*QSPSKS
Trigger: ACTCTTACTGGGAGATTGCAAACTGCCACATCTCAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGTACATTTTCCTAATTaGCTCAAGATGCGTGGTGAA +
Preference number: 3 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSVHFPN*LKMRGE
Trigger: TTCACCACGCATCTTGAGCAAATTAGGAAAATGTAC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCACTGTCATCTGTGTTaGGACTTACTAAGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: LIANMTPSFWNTVSGICHHCHLC*DLLSLL
Trigger: TAACAGGCTTAGTAAGTCCAAACACAGATGACAGTG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGCAAGGTCTTCTATTTaGATGGTTGGATTATACCCA +
Preference number: 3 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSARSSI*MVGLYP
Trigger: TGGGTATAATCCAACCATCAAAATAGAAGACCTTGC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp AGACCTAGAGAGAAGGGTGAACAGATAACGTGTTCATaGATCAGGAGATTCATAGCAGAGAAACTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: RPREKGEQITCS*IRRFIAEKLRG
Trigger: TCCTCTCAGTTTCTCTGCTATGAATCTCCTGATTCATGAACACGTTATCTGTTCACCCTTCTCTCTAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp CTGGCACACTTTGGTCTGATACAAGATCCTGTTCCATaGTGCTTTGATTTTATAGACCTCTTGGTCACAGTC +
Preference number: 3 (lower is better)
Translates to: LAHFGLIQDPVP*CFDFIDLLVTV
Trigger: GACTGTGACCAAGAGGTCTATAAAATCAAAGCATCATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp GAGTACAAGTGCATGGCCCTTGGTGACAAGAAGTCTTaGATTCAAATACTGTCTTCCCAGCTTTCCAGATTT +
Preference number: 3 (lower is better)
Translates to: EYKCMALGDKKS*IQILSSQLSRF
Trigger: AAATCTGGAAAGCTGGGAAGACAGTATTTGAATTCAAGACTTCTTGTCACCAAGGGCCATGCACTTGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR GCA 72 bp GGTATTTTTCTGACTGTTCATGCTATTACTTGCAGCTaGAGTTCAGCGTTAACTGTAGTGTCTGTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: GIFLTVHAITCS*SSALTVVSVLE
Trigger: TTCCAGCACAGACACTACAGTTAACGCTGAACTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATGTTCATGCTATTACTaGCAGCTGCAGTTCAGCGTT +
Preference number: 3 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSCSCYY*QLQFSV
Trigger: AACGCTGAACTGCAGCTGCAAGTAATAGCATGAACA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp CAGACCCAGGCACTCTACTGTCAGAGCCCACATTTATaGCCACTCATTATATTTCCTCTTATTGTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: QTQALYCQSPHL*PLIIFPLIVFV
Trigger: AACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGACAGTAGAGTGCCTGGGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CCA 72 bp TATTTTAGGATAAACGCAGCCTGTTCAGTGTCACTTTaGAATTCCTCCATCCTTTATGACCAAGCCTCTTTC +
Preference number: 3 (lower is better)
Translates to: YFRINAACSVSL*NSSILYDQASF
Trigger: GAAAGAGGCTTGGTCATAAAGGATGGAGGAATTCCAAAGTGACACTGAACAGGCTGCGTTTATCCTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGCAAGGTCTTCTATTTaGATGGTTGGATTATACCCA +
Preference number: 3 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSARSSI*MVGLYP
Trigger: TGGGTATAATCCAACCATCAAAATAGAAGACCTTGC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTGTTCATGCTATTACTaGCAGCTGCAGTTCAGCGTT +
Preference number: 3 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFCSCYY*QLQFSV
Trigger: AACGCTGAACTGCAGCTGCAAGTAATAGCATGAACA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAAATGCTTGCCAGAATTaGATTGCACCATGCTTATTG +
Preference number: 3 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSNACQN*IAPCLL
Trigger: CAATAAGCATGGTGCAATCAAATTCTGGCAAGCATT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR TCA 72 bp CTTTGGTCTGATACAAGATCCTGTTCCATGATGCTTTaGTTTTATAGACCTCTTGGTCACAGTCTAGTTCAT +
Preference number: 3 (lower is better)
Translates to: LWSDTRSCSMML*FYRPLGHSLVH
Trigger: ATGAACTAGACTGTGACCAAGAGGTCTATAAAATCAAAGCATCATGGAACAGGATCTTGTATCAGACCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTTGCCTCAGCTTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAAGCTGAGGCAAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGCCCCTTCCTGCCTGTaGCCGATTTCCAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRAPSCL*PISKLA
Trigger: GGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTAGACAGGCCCCTTCCTaGCTGTGCCCGATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACRQAPS*LCPISK
Trigger: CTTGGAAATCGGGCACAGGCAGGAAGGGGCCTGTCT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGCCCGATTTCCAAGCTaGCCCAACCAGGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACARFPS*PNQAIP
Trigger: GGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGGGAAGGGCTGCATCTaGCTCAAGCGAAGGGTACAT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACGKGCI*LKRRVH
Trigger: ATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCTGGACTCTGCTGGCTaGGTGTTCCTTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACLDSAG*VFLEAM
Trigger: CATGGCTTCAAGGAACACCCAGCCAGCAGAGTCCAG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTAGTACGGAAGCCCATTaGGATGTCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACSTEAH*DVCTEL
Trigger: CAGCTCTGTGCAGACATCGCAATGGGCTTCCGTACT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGATGGGGTTTTGCCATaGTGGCCAGGATCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACDGVLP*WPGSSQ
Trigger: TTGAGAGGATCCTGGCCAGCATGGCAAAACCCCATC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTACAGATGGGGTTTTaGCATGCTGGCCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVQMGF*HAGQDP
Trigger: AGGATCCTGGCCAGCATGGCAAAACCCCATCTGTAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGCCCCTTCCTGCCTGTaGCCGATTTCCAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTAPSCL*PISKLA
Trigger: GGCCAGCTTGGAAATCGGGCACAGGCAGGAAGGGGC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCCAAGCCGACAGGTTTaGAGGCAAAGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACPSRQV*RQRSKI
Trigger: GATCTTGCTCCTTTGCCTGCAAACCTGTCGGCTTGG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCTGGTGATCTGTTTGTaGGGCATGCCAGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLVICL*GMPGWR
Trigger: CCGCCACCCTGGCATGCCCCACAAACAGATCACCAG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGCCCGATTTCCAAGCTaGCCCAACCAGGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRARFPS*PNQAIP
Trigger: GGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGCATCCCAGACAACATaGGCAAAGGCATGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACASQTT*AKAWED
Trigger: ATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAAGCAACCCGGTGTGGTaGGTACGGAAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTSNPVW*VRKPIA
Trigger: CGCAATGGGCTTCCGTACTCACCACACCGGGTTGCT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATCTGTTTGTGGGGCATaGCAGGGTGGCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTSVCGA*QGGGTL
Trigger: CAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTGGGGCATGCCAGGGTaGCGGCACTCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINWGMPG*RHSASA
Trigger: AGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGCACATCTTCTACTTTaGGGCCTTGCAGCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACAHLLL*GLAAPN
Trigger: GTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGGGGTTTTGCCATGCTaGCCAGGATCCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACGVLPC*PGSSQI
Trigger: AATTTGAGAGGATCCTGGCCAGCATGGCAAAACCCC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp GCATCCCAGACAACATGGGCAAAGGCATGGGAGGATTaGGTGGGTGTGTGGGCCCATGATAATTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASQTTWAKAWED*VGVWAHDNSVW
Trigger: CCACACAGAATTATCATGGGCCCACACACCCACCAAATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAATTCCTGACCTCAAGTaGTCCGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTIPDLK*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAAT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTTCCTCCATCCTTTATaGCCAAGCCTCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACFLHPL*PSLFPP
Trigger: AGGAGGAAAGAGGCTTGGTCATAAAGGATGGAGGAA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTAGAGGGCTCTGTCTCTaGGACTTCCATTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACRGLCL*DFHFDA
Trigger: TGCATCAAAATGGAAGTCTCAGAGACAGAGCCCTCT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACCTCCCAGGTTCAAGTaGTTCTGTTGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRPPRFK*FCCLSF
Trigger: GAAGCTGAGGCAACAGAATCACTTGAACCTGGGAGG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATGTCTGCACAGAGCTaGCGGGCAGAGATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWMSAQS*RAEMES
Trigger: TGACTCCATCTCTGCCCGGCAGCTCTGTGCAGACAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAATGCAGCCCACATTCTaGTCTCCAAGCCATGCACTC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRMQPTF*SPSHAL
Trigger: GAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCAT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAAAGCCCAAGGTGTCTaGAGGCAGGACTGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRKAQGV*RQDCPN
Trigger: GTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGTTGTAGCGCTTGGTaGTGGTGTAGGGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGCSAW*WCRDQP
Trigger: AGGCTGATCCCTACACCACCACCAAGCGCTACAACC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATCACTGGCTCTTCCTTaGAGGGAAGCACCTTGGACT +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSLALP*REAPWT
Trigger: AGTCCAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAACATGGGCAAAGGCATaGGAGGATTTGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRTWAKA*EDLVGV
Trigger: CACACCCACCAAATCCTCCCATGCCTTTGCCCATGT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp TGCATCTGCCTCAAGCGAAGGGTACATTTTCCTAATTaGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: CICLKRRVHFPN*LKMRGEGHAPG
Trigger: CCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAGTCAGAATTGTTGCTaGCAGGGTTCTGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSQNCC*QGSGLY
Trigger: GTACAGCCCAGAACCCTGTCAGCAACAATTCTGACT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGAGCAACCCGGTGTGGTaGGTACGGAAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVSNPVW*VRKPIA
Trigger: CGCAATGGGCTTCCGTACTCACCACACCGGGTTGCT...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTGGCTGGGTGTTCCTTaGAGCCATGATATATGTGTA +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACWLGVP*SHDICV
Trigger: TACACATATATCATGGCTTCAAGGAACACCCAGCCA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGCTCAAGATGCGTGGTaGAGGCCACGCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINAQDAW*RPRTRD
Trigger: ATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATAGGCAAGGGACTGTaGGCATGCATGGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWIGKGL*ACMVHL
Trigger: CAGATGCACCATGCATGCTCACAGTCCCTTGCCTAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTAGAATGTTTATGACCTaGAACCCCTGCCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACRMFMT*NPCLSK
Trigger: TTTGGACAGGCAGGGGTTTCAGGTCATAAACATTCT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAATGATCTGAGGGAGTaGGCATGTAGAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRNDLRE*ACRGKV
Trigger: CACCTTCCCTCTACATGCTCACTCCCTCAGATCATT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTCTGTTTGTGGGGCATaGCAGGGTGGCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINSVCGA*QGGGTL
Trigger: CAGAGTGCCGCCACCCTGGCATGCCCCACAAACAGA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGCAGGTTGTAGCGCTTaGTGGTGGTGTAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTAGCSA*WWCRDQ
Trigger: CTGATCCCTACACCACCACCAAGCGCTACAACCTGC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAAGAAGTGCTCTCTGTaGACACGGCCCAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWKKCSL*TRPKPD
Trigger: GTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTCTT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGCAACCCGGTGTGGTaGGTACGGAAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSNPVW*VRKPIA
Trigger: CGCAATGGGCTTCCGTACTCACCACACCGGGTTGCT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGCTCAAGATGCGTGGTaGAGGCCACGCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHAQDAW*RPRTRD
Trigger: ATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGCTGGAATTGTCTCCTaGGCTACACAAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWAGIVS*ATQEQT
Trigger: TGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAATAGGCAAGGGACTGTaGGCATGCATGGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTIGKGL*ACMVHL
Trigger: CAGATGCACCATGCATGCTCACAGTCCCTTGCCTAT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATTCCTGACCTCAAGTaGTCCGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSIPDLK*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGTTGCCTCAGCTTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINVASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAAGCTGAGGCAAC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAATGATCTGAGGGAGTaGGCATGTAGAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWNDLRE*ACRGKV
Trigger: CACCTTCCCTCTACATGCTCACTCCCTCAGATCATT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAAGTACGGAAGCCCATTaGGATGTCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTSTEAH*DVCTEL
Trigger: CAGCTCTGTGCAGACATCGCAATGGGCTTCCGTACT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGTACAGATGGGGTTTTaGCATGCTGGCCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTVQMGF*HAGQDP
Trigger: AGGATCCTGGCCAGCATGGCAAAACCCCATCTGTAC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACTTCTCCCTCCAAAGTaGCTTTACACTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLLPPK*LYTRNS
Trigger: GCTGTTCCTAGTGTAAAGGCACTTTGGAGGGAGAAG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACTCTTTCCTCCTTCCTaGACGTCTCTTCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTLFPPS*TSLLGV
Trigger: CACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATGGGGCATGCCAGGGTaGCGGCACTCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSWGMPG*RHSASA
Trigger: AGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACATGCTTCTCTCACTTaGAGGCCCTCTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTHASLT*RPSVFL
Trigger: GAGGAAGACAGAGGGCCTCCAAGTGAGAGAAGCATG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGACTGTGAGCATGCATaGTGCATCTGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTDCEHA*CIWRGA
Trigger: AGCACCTCTCCAGATGCACCATGCATGCTCACAGTC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCAGGTAAGTAGACTGTaGTATAATAACGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACQVSRL*YNNEGN
Trigger: GTTCCCCTCGTTATTATACCACAGTCTACTTACCTG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCTGTTGAGAACTGTCTaGGCAATCAGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLLRTV*AISQQQ
Trigger: CTGTTGCTGGCTGATTGCCCAGACAGTTCTCAACAG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACATGGGAGGATTTGGTaGGTGTGTGGGCCCATGATA +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTHGRIW*VCGPMI
Trigger: TATCATGGGCCCACACACCCACCAAATCCTCCCATG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAGGCATGGGAGGATTTaGTGGGTGTGTGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINRHGRI*WVCGPM
Trigger: CATGGGCCCACACACCCACCAAATCCTCCCATGCCT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAACATGGGCAAAGGCATaGGAGGATTTGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTTWAKA*EDLVGV
Trigger: CACACCCACCAAATCCTCCCATGCCTTTGCCCATGT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp GGGATCTTCACACATACTGACTGTGAGCAGAGCATCTaGGCTGGTGTGCCATGGCCTATTACAGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GIFTHTDCEQSI*AGVPWPITGVQ
Trigger: TTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAAGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTACGGAACAAAAACACTaGAGACAGAATGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACTEQKH*RQNENK
Trigger: CTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGT...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATGGCTGGGTGTTCCTTaGAGCCATGATATATGTGTA +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRWLGVP*SHDICV
Trigger: TACACATATATCATGGCTTCAAGGAACACCCAGCCA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTATATGGTTTTCTTTaGGGCAGCATCTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVYGFL*GSILSS
Trigger: AGAAGACAAGATGCTGCCTCAAAGAAAACCATATAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATCTTTGGAACTGGGATaGACCCAGTTTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSLELG*TQFHHL
Trigger: CAGATGATGAAACTGGGTTCATCCCAGTTCCAAAGA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTAGTTGGTGCTAGATaGGTCTATGGATTCATTTAC +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVVGAR*VYGFIY
Trigger: GTAAATGAATCCATAGACTCATCTAGCACCAACTAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGCTGGAATTGTCTCCTaGGCTACACAAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTAGIVS*ATQEQT
Trigger: TGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTGCCCAGCTGCATCCTaGTATTTAATGCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWCPAAS*YLMLAR
Trigger: TCTGGCAAGCATTAAATATCAGGATGCAGCTGGGCA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATGGCACACTTTGGTCTaGTACAAGATCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRWHTLV*YKILFH
Trigger: ATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAACGCTAAACTTGAGGTaGCTTCTGACATCTATGCAG +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRTLNLR*LLTSMQ
Trigger: CTGCATAGATGTCAGAAGTCACCTCAAGTTTAGCGT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGATGTCTGCACAGAGCTaGCGGGCAGAGATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWMSAQS*RAEMES
Trigger: TGACTCCATCTCTGCCCGGCAGCTCTGTGCAGACAT...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATGTCTGCACAGAGCTaGCGGGCAGAGATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSMSAQS*RAEMES
Trigger: TGACTCCATCTCTGCCCGGCAGCTCTGTGCAGACAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGTAGCGCTTGGTGGTaGTGTAGGGATCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRSQFHSLKSQEVYCPVCCSAWW*CRDQPV
Trigger: CACAGGCTGATCCCTACACCACCACCAAGCGCTACA...GCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTGTAGCGCTTGGTGGTaGTGTAGGGATCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSCSAWW*CRDQPV
Trigger: CACAGGCTGATCCCTACACCACCACCAAGCGCTACA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGGTTGTAGCGCTTGGTaGTGGTGTAGGGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPGCSAW*WCRDQP
Trigger: AGGCTGATCCCTACACCACCACCAAGCGCTACAACC...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGGCAGGTTGTAGCGCTTaGTGGTGGTGTAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWAGCSA*WWCRDQ
Trigger: CTGATCCCTACACCACCACCAAGCGCTACAACCTGC...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCTGGACTCTGCTGGCTaGGTGTTCCTTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLDSAG*VFLEAM
Trigger: CATGGCTTCAAGGAACACCCAGCCAGCAGAGTCCAG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTACTGTCCTGTGTGCTaGCTTTCCCCATCTTATCAG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWYCPVC*LSPSYQ
Trigger: CTGATAAGATGGGGAAAGCCAGCACACAGGACAGTA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATTCCAACACTCCATTTaGAGAGTGTGTCTACATGGC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRFQHSI*RVCLHG
Trigger: GCCATGTAGACACACTCTCCAAATGGAGTGTTGGAA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTGAGAAATATAAGCTaGTCAGTTCCTTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVRNIS*SVPFGE
Trigger: CTCTCCAAAAGGAACTGACCAGCTTATATTTCTCAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACTGGTGATCTGTTTGTaGGGCATGCCAGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLLVICL*GMPGWR
Trigger: CCGCCACCCTGGCATGCCCCACAAACAGATCACCAG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGGGGTTTTGCCATGCTaGCCAGGATCCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTGVLPC*PGSSQI
Trigger: AATTTGAGAGGATCCTGGCCAGCATGGCAAAACCCC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTCACCTCCTTACAACTaGTTAGGTGCTTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWSPPYN*LGASAD
Trigger: GTCAGCTGAAGCACCTAACCAGTTGTAAGGAGGTGA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGCGGTTTCACAACCTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSAVSQP*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTGGACCCCTCACACTTaGATGGGGGCTTATTTAAGT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWWTPHT*MGAYLS
Trigger: ACTTAAATAAGCCCCCATCCAAGTGTGAGGGGTCCA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTATTTACAGGGAAAGTaGCTGACTCTCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWYLQGK*LTLPES
Trigger: GGATTCTGGGAGAGTCAGTCACTTTCCCTGTAAATA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAATGATTCTTCCTCATTaGGGAGAGTTAATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRMILPH*GELMPV
Trigger: CACAGGCATTAACTCTCCTCAATGAGGAAGAATCAT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTGAATACACCCCACTaGTCCAGGCCCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLNTPH*SRPLLI
Trigger: AATGAGCAGGGGCCTGGATCAGTGGGGTGTATTCAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAAGAGGGCTCTGTCTCTaGGACTTCCATTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTRGLCL*DFHFDA
Trigger: TGCATCAAAATGGAAGTCTCAGAGACAGAGCCCTCT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTCCTCCCAGGTTCAAGTaGTTCTGTTGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSPPRFK*FCCLSF
Trigger: GAAGCTGAGGCAACAGAATCACTTGAACCTGGGAGG...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGATAAAGCAATGATCTaGGGGAGTGAGCATGTAGAG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWDKAMI*GSEHVE
Trigger: CTCTACATGCTCACTCCCTCAGATCATTGCTTTATC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTAGTACGGAAGCCCATTaGGATGTCTGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPSTEAH*DVCTEL
Trigger: CAGCTCTGTGCAGACATCGCAATGGGCTTCCGTACT...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATTTAGGCACAAGCTATaGCCAGCAGAAGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTFRHKL*PAEGFL
Trigger: CAGGAAACCTTCTGCTGGGCATAGCTTGTGCCTAAA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATGCAGCCCACATTCTaGTCTCCAAGCCATGCACTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSMQPTF*SPSHAL
Trigger: GAGTGCATGGCTTGGAGAGCAGAATGTGGGCTGCAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRLLSLL*PAQRFP
Trigger: TGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAACTGATGTCTTTATCTaGCTAATTGCAGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRTDVFI*LIAAHC
Trigger: GCAATGGGCTGCAATTAGGCAGATAAAGACATCAGT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAACTAAGAAACCAGGATaGAGACCCAGGCACTCTACT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTTKKPG*RPRHST
Trigger: AGTAGAGTGCCTGGGTCTGCATCCTGGTTTCTTAGT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATAAACTGTGTTCACTaGCTCTTCCTTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWINCVH*LFLGGK
Trigger: CTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATACTGTCCTGTGTGCTaGCTTTCCCCATCTTATCAG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTYCPVC*LSPSYQ
Trigger: CTGATAAGATGGGGAAAGCCAGCACACAGGACAGTA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCTCCCAAGTTCCTTCTaGAGAATGACTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLPSSF*RMTLLL
Trigger: AAGAAGCAGAGTCATTCTCCAGAAGGAACTTGGGAG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAGTTCTCTGAGTCTTTaGAACTGGGATGAACCCAGT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWSSLSL*NWDEPS
Trigger: ACTGGGTTCATCCCAGTTCCAAAGACTCAGAGAACT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTCATGCTTCTCTCACTTaGAGGCCCTCTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSHASLT*RPSVFL
Trigger: GAGGAAGACAGAGGGCCTCCAAGTGAGAGAAGCATG...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAACATGTAAATGGACATaGGGTGAGGGCACACATCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTTCKWT*GEGTHL
Trigger: CAGATGTGTGCCCTCACCCCATGTCCATTTACATGT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTCTGCACGTCTCTTCTTaGGGTGCTGTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSLHVSS*GAVFHL
Trigger: GAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAG...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTCAACCTTGGCCAGGCTaGTCTCGAACTCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSQPWPG*SRTPCD
Trigger: ATCACAAGGAGTTCGAGACCAGCCTGGCCAAGGTTG...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATGGACCCCTCACACTTaGATGGGGGCTTATTTAAGT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTWTPHT*MGAYLS
Trigger: ACTTAAATAAGCCCCCATCCAAGTGTGAGGGGTCCA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGCATCCCAGACAACATaGGCAAAGGCATGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINASQTT*AKAWED
Trigger: ATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCAGTCAGAATTGTTGCTaGCAGGGTTCTGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PRSQFHSLKSQEVYCPVCSQNCC*QGSGLY
Trigger: GTACAGCCCAGAACCCTGTCAGCAACAATTCTGACT...GCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATTTCTACATGTGCTATaGTGGGAAGAAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRFLHVL*WEEVWE
Trigger: TTCCCAAACTTCTTCCCATCATAGCACATGTAGAAA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTGCAGCTTCCAGAAGTaGGCAATCTTGCTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWCSFQK*AILLVY
Trigger: ATAAACAAGCAAGATTGCTCACTTCTGGAAGCTGCA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGATGCTTGCCAGAATTTaGTTGCACCATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWMLARI*LHHAYW
Trigger: CCAATAAGCATGGTGCAATCAAATTCTGGCAAGCAT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAAGAGTAGGGTGTCCTaGGTCCAAAGGCTACCTTCA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINKSRVS*VQRLPS
Trigger: TGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACAGAGCCCACATTTATaGCCACTCATTATATTTCCT +
Preference number: 4 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRQSPHL*PLIIFP
Trigger: AGGAAATATAATGAGTGGTCATAAATGTGGGCTCTG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATCATCAGAATGTTTATaGCCTGAAACCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTSSECL*PETPAC
Trigger: ACAGGCAGGGGTTTCAGGTCATAAACATTCTGATGA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGCAATGATTTTAACTTaGCGTGGTTCTTGGATATTT +
Preference number: 4 (lower is better)
Translates to: CLCPISKLAQPGYSLIACAMILT*RGSWIF
Trigger: AAATATCCAAGAACCACGGCAAGTTAAAATCATTGC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGCCTATTACAGGTGTaGAAAATATTGATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGLLQV*KILIPF
Trigger: GAAGGGGATCAATATTTTGCACACCTGTAATAGGCC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGGGAAGGGCTGCATCTaGCTCAAGCGAAGGGTACAT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLGKGCI*LKRRVH
Trigger: ATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTGTGAGCATGCATGGTaGATCTGGAGAGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHCEHAW*IWRGAL
Trigger: CAGAGCACCTCTCCAGATGCACCATGCATGCTCACA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGCCACCGTGCCCAGCTaGATCCTGATATTTAATGCT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSATVPS*ILIFNA
Trigger: AGCATTAAATATCAGGATGCAGCTGGGCACGGTGGC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGGGGTCTAACCTTCTGTaGAAAAGCACGGCACTGTTC +
Preference number: 4 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVGSNLL*KSTALF
Trigger: GAACAGTGCCGTGCTTTTCCACAGAAGGTTAGACCC...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGGGTCTAACCTTCTGTaGAAAAGCACGGCACTGTTC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSGSNLL*KSTALF
Trigger: GAACAGTGCCGTGCTTTTCCACAGAAGGTTAGACCC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGTCACTGGCTCTTCCTTaGAGGGAAGCACCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWSLALP*REAPCL
Trigger: AAGACAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGA...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACTCCCAAGTTCCTTCTaGAGAATGACTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTLPSSF*RMTLLL
Trigger: AAGAAGCAGAGTCATTCTCCAGAAGGAACTTGGGAG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGCAACCTCCACTTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHATSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAAGTGGAGGTTGC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCAACCTTGGCCAGGCTaGTCTCGAACTCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHQPWPG*SRTPCD
Trigger: ATCACAAGGAGTTCGAGACCAGCCTGGCCAAGGTTG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATAATTCTGTGTGGCTaGAGCCTTAGGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSIILCG*SLREQA
Trigger: TGCCTGCTCCCTAAGGCTCCAGCCACACAGAATTAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCATGGGAGGATTTGGTaGGTGTGTGGGCCCATGATA +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHHGRIW*VCGPMI
Trigger: TATCATGGGCCCACACACCCACCAAATCCTCCCATG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGACGGAACAAAAACACTaGAGACAGAATGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWTEQKH*RQNENK
Trigger: CTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGTATATGGTTTTCTTTaGGGCAGCATCTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWVYGFL*GSILSS
Trigger: AGAAGACAAGATGCTGCCTCAAAGAAAACCATATAC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGCTGTCATGAGTATTaGCAACAATGTATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGCHEY*QQCMKH
Trigger: ATGCTTCATACATTGTTGTCAATACTCATGACAGCC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGGGTGACAAGAAGTCTTaGATTCAAATACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWGDKKS*IQILSS
Trigger: GGAAGACAGTATTTGAATTCAAGACTTCTTGTCACC...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTTGTACAGGGCTGTTaGGAACTGTCTGGGCAATCA +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLVQGC*ELSGQS
Trigger: TGATTGCCCAGACAGTTCTCAACAGCCCTGTACAAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTTCCAGTCTCAGAATTaGTCCATCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSFQSQN*SIPNPE
Trigger: CTCTGGGTTTGGGATGGATCAATTCTGAGACTGGAA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGCTTTGTAGTCTCCTaGGTCTTCCATCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: PRSQFHSLKSQEVYCPVCCFVVS*VFHPQI
Trigger: GATCTGAGGATGGAAGACGCAGGAGACTACAAAGCA...GCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACAAGAGCAGACATTATaGACATCTTCTACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTQEQTL*TSSTLG
Trigger: CCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATGTGAGCATGCATGGTaGATCTGGAGAGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLCEHAW*IWRGAL
Trigger: CAGAGCACCTCTCCAGATGCACCATGCATGCTCACA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTTGCCAGAATTTGATTaGACCATGCTTATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLPEFD*TMLIGF
Trigger: GAAGCCAATAAGCATGGTGCAATCAAATTCTGGCAA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGCTTCATCCCAGGTTTaGTCTTCTGGAAGACCTAAC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINASSQV*SSGRPN
Trigger: GTTAGGTCTTCCAGAAGAGCAAACCTGGGATGAAGC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTACTAAGAAACCAGGATaGAGACCCAGGCACTCTACT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSTKKPG*RPRHST
Trigger: AGTAGAGTGCCTGGGTCTGCATCCTGGTTTCTTAGT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAACTTGCCGTGGTTCTTaGATATTTACAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTTCRGS*IFTGKV
Trigger: CACTTTCCCTGTAAATATCCAAGAACCACGGCAAGT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGACTCTGTGTAATTTTTaGTTTCCCAAGCCGACGATA +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWTLCNF*FPKPTI
Trigger: TATCGTCGGCTTGGGAAACCAAAAATTACACAGAGT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGTACTGTCCTGTGTGCTaGCTTTCCCCATCTTATCAG +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWYCPVC*LSPSYQ
Trigger: CTGATAAGATGGGGAAAGCCAGCACACAGGACAGTA...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGAGAGTGTGTCTACATaGCTGAGAGCCACAACTCTG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHESVST*LRATTL
Trigger: CAGAGTTGTGGCTCTCAGCCATGTAGACACACTCTC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGTTCCTTTTGGAGAGTaGGAATACTGGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHVPFGE*EYWAWL
Trigger: CAGCCATGCCCAGTATTCCCACTCTCCAAAAGGAAC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAATGCCTGTGTAAGCTaGCTGGTGATCTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINNACVS*LVICLW
Trigger: CCACAAACAGATCACCAGCCAGCTTACACAGGCATT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGCGGTTTCACAACCTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSAVSQP*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTGTTGAGAACTGTCTaGGCAATCAGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLLRTV*AISQQQ
Trigger: CTGTTGCTGGCTGATTGCCCAGACAGTTCTCAACAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGCACTGTGAAGATTTCTaGGTCTTTTCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVHCEDF*VFSSCF
Trigger: GAAGCAGCTGGAAAAGACTCAGAAATCTTCACAGTG...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCACTGTGAAGATTTCTaGGTCTTTTCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINHCEDF*VFSSCF
Trigger: GAAGCAGCTGGAAAAGACTCAGAAATCTTCACAGTG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR TCA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTATTTACAGGGAAAGTaGCTGACTCTCCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVYLQGK*LTLPES
Trigger: GGATTCTGGGAGAGTCAGTCACTTTCCCTGTAAATA...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGGGAGTCTGGAAGATTTaGAGGACATTACCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVGVWKI*RTLPSS
Trigger: AGAAGAGGGTAATGTCCTTCAAATCTTCCAGACTCC...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAAGTCAGAATTGTTGCTaGCAGGGTTCTGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLSQNCC*QGSGLY
Trigger: GTACAGCCCAGAACCCTGTCAGCAACAATTCTGACT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTAGGTGTGCAAAATATTaGTCCCCTTCTCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSRCAKY*SPSPTV
Trigger: AACTGTGGGAGAAGGGGATCAATATTTTGCACACCT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAGGTGTGCAAAATATTaGTCCCCTTCTCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINRCAKY*SPSPTV
Trigger: AACTGTGGGAGAAGGGGATCAATATTTTGCACACCT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGACTTCACCTTTCTGTaGCCCAGTTTCCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINDFTFL*PSFLLC
Trigger: ACAAAGTAGGAAACTGGGTCACAGAAAGGTGAAGTC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGGTTTACTGTCCTGTGTaGTGGCTTTCCCCATCTTAT +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWVYCPV*WLSPSY
Trigger: ATAAGATGGGGAAAGCCAGCACACAGGACAGTAAAC...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGTTTACTGTCCTGTGTaGTGGCTTTCCCCATCTTAT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSVYCPV*WLSPSY
Trigger: ATAAGATGGGGAAAGCCAGCACACAGGACAGTAAAC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAAGCCTGTTATGCCCTaGACAAAGATTCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINKPVMP*TKIPRQ
Trigger: TTGTCTGGGAATCTTTGTGCAGGGCATAACAGGCTT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATTGCCAGAATTTGATTaGACCATGCTTATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTLPEFD*TMLIGF
Trigger: GAAGCCAATAAGCATGGTGCAATCAAATTCTGGCAA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTCTTTCCTCCTTCCTaGACGTCTCTTCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLFPPS*TSLLGV
Trigger: CACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACCAGCTTTCCAGATTTaGCAAGGTATTCATATGTCA +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTPAFQI*QGIHMS
Trigger: TGACATATGAATACCTTGGCAAATCTGGAAAGCTGG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTATAAACTGTGTTCACTaGCTCTTCCTTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPINCVH*LFLGGK
Trigger: CTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTAT...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTTCCAACACTCCATTTaGAGAGTGTGTCTACATGGC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINFQHSI*RVCLHG
Trigger: GCCATGTAGACACACTCTCCAAATGGAGTGTTGGAA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTCACCTCCTTACAACTaGTTAGGTGCTTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSPPYN*LGASAD
Trigger: GTCAGCTGAAGCACCTAACCAGTTGTAAGGAGGTGA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTGCACGTCTCTTCTTaGGGTGCTGTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLHVSS*GAVFHL
Trigger: GAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAAAGAAGTGCTCTCTGTaGACACGGCCCAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSKKCSL*TRPKPD
Trigger: GTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTCTT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTCATTTGCAAAGATTTaGCCATTTTCCAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWSFAKI*PFSSLR
Trigger: TCTGAGACTGGAAAATGGCCAAATCTTTGCAAATGA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCAGGCATGGGAGGATTTaGTGGGTGTGTGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFRHGRI*WVCGPM
Trigger: CATGGGCCCACACACCCACCAAATCCTCCCATGCCT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp TGCAGTTCAGCGTTAACTGTAGTGTCTGTGCTGGAATaGTCTCCTGAGCTACACAAGAGCAGACATTATGCA +
Preference number: 4 (lower is better)
Translates to: CSSALTVVSVLE*SPELHKSRHYA
Trigger: TGCATAATGTCTGCTCTTGTGTAGCTCAGGAGACAATTCCAGCACAGACACTACAGTTAACGCTGAACTGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTCACAATTTCATAGCTTaGAGTCCCAGGAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPHNFIA*SPRRFT
Trigger: AGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTG...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATGATTCTTCCTCATTaGGGAGAGTTAATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSMILPH*GELMPV
Trigger: CACAGGCATTAACTCTCCTCAATGAGGAAGAATCAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTGAATACACCCCACTaGTCCAGGCCCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLNTPH*SRPLLI
Trigger: AATGAGCAGGGGCCTGGATCAGTGGGGTGTATTCAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAAAGATGTTTGGGAATaGGTCTTCAACGCATCCACA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINKDVWE*VFNAST
Trigger: TGTGGATGCGTTGAAGACTCATTCCCAAACATCTTT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACAAGATCCTGTTCCATaGTGCTTTGATTTTATAGAC +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTQDPVP*CFDFID
Trigger: GTCTATAAAATCAAAGCATCATGGAACAGGATCTTG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTTGTACAGGGCTGTTaGGAACTGTCTGGGCAATCA +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLVQGC*ELSGQS
Trigger: TGATTGCCCAGACAGTTCTCAACAGCCCTGTACAAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGACTTCACCTTTCTGTaGCCCAGTTTCCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHDFTFL*PSFLLC
Trigger: ACAAAGTAGGAAACTGGGTCACAGAAAGGTGAAGTC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTTTATTGTGTCCTGCTaGAATGGAGCTTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINFIVSC*NGACSL
Trigger: GAGACTACAAGCTCCATTTCAGCAGGACACAATAAA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGCTGTGTATTTATGTCTaGTTTGTAGTCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWLCIYV*FVVSCV
Trigger: GACGCAGGAGACTACAAAGCAGACATAAATACACAG...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGAAGGTTTCCTGCTTTaGTTACAGGCTGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLEGFLL*LQAEMW
Trigger: CCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTTACTAAGCCTGTTATaGCCTGCACAAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSLLSLL*PAQRFP
Trigger: TGGGAATCTTTGTGCAGGGCATAACAGGCTTAGTAA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGTTCATGCTATTACTTaGAGCTGCAGTTCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINVHAIT*SCSSAL
Trigger: TAACGCTGAACTGCAGCTGCAAGTAATAGCATGAAC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGTTCATGCTATTACTTaGAGCTGCAGTTCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSVHAIT*SCSSAL
Trigger: TAACGCTGAACTGCAGCTGCAAGTAATAGCATGAAC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAACTGATCCAGGCCCCTaGTCATTTTTCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLTDPGP*SFFMLL
Trigger: GAGAAGCATGAAAAATGAGCAGGGGCCTGGATCAGT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGTTATTTTTGACAATATaGATAGGGGCATTAGGACAC +
Preference number: 4 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLFLTI*IGALGH
Trigger: GTGTCCTAATGCCCCTATGCATATTGTCAAAAATAA...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAATGGCAGAGTACAAGTaGATGGCCCTTGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSMAEYK*MALGDK
Trigger: CTTGTCACCAAGGGCCATGCACTTGTACTCTGCCAT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGGGTCTAACCTTCTGTaGAAAAGCACGGCACTGTTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSGSNLL*KSTALF
Trigger: GAACAGTGCCGTGCTTTTCCACAGAAGGTTAGACCC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGACTTGCCGTGGTTCTTaGATATTTACAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWTCRGS*IFTGKV
Trigger: CACTTTCCCTGTAAATATCCAAGAACCACGGCAAGT...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGATTTTAACTTGCCGTaGTTCTTGGATATTTACAGG +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTDFNLP*FLDIYR
Trigger: CCTGTAAATATCCAAGAACCACGGCAAGTTAAAATC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACATAAACTGTGTTCACTaGCTCTTCCTTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHINCVH*LFLGGK
Trigger: CTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTAT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTGAGTCTTTGGAACTaGGATGAACCCAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLSLWN*DEPSFI
Trigger: GATGAAACTGGGTTCATCCCAGTTCCAAAGACTCAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGCACATCTTCTACTTTaGGGCCTTGCAGCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSAHLLL*GLAAPN
Trigger: GTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTTCTCTCAGTCTAACTaGGGAGGCAGATATAGCATC +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHFSQSN*GGRYSI
Trigger: GATGCTATATCTGCCTCCCCAGTTAGACTGAGAGAA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTATGACACCTAGCTTCTaGAATACGGTTAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSMTPSF*NTVSGI
Trigger: AATGCCACTAACCGTATTCCAGAAGCTAGGTGTCAT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACACTCTGTGTAATTTTTaGTTTCCCAAGCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINTLCNF*FPKPTG
Trigger: ACCTGTCGGCTTGGGAAACCAAAAATTACACAGAGT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534968.5
3UTR CAA 72 bp AAAAGGGCCACATGGCAGAGTACAAGTGCATGGCCCTaGGTGACAAGAAGTCTTGAATTCAAATACTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRATWQSTSAWP*VTRSLEFKYCL
Trigger: AAGACAGTATTTGAATTCAAGACTTCTTGTCACCAAGGGCCATGCACTTGTACTCTGCCATGTGGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGACGGAACAAAAACACTaGAGACAGAATGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWTEQKH*RQNENK
Trigger: CTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGT...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGCACCTTGTCTTCTCTTaGACAAACGGAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWHLVFS*TNGTKT
Trigger: TGTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGGTG...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGTAGTTGGTGCTAGATaGGTCTATGGATTCATTTAC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINVVGAR*VYGFIY
Trigger: GTAAATGAATCCATAGACTCATCTAGCACCAACTAC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGTTAGGTGCTTCAGCTaGCCTCTTAGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFVRCFS*PLSWSA
Trigger: GGCAGACCAACTAAGAGGTCAGCTGAAGCACCTAAC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCAGAGCCCACATTTATaGCCACTCATTATATTTCCT +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINQSPHL*PLIIFP
Trigger: AGGAAATATAATGAGTGGTCATAAATGTGGGCTCTG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATCATCAGAATGTTTATaGCCTGAAACCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLSSECL*PETPAC
Trigger: ACAGGCAGGGGTTTCAGGTCATAAACATTCTGATGA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTCATCCATTCCTTTATaGATTCCCAAAGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSSSIPL*IPKVCK
Trigger: CTTGCAGACTTTGGGAATTCATAAAGGAATGGATGA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTCCAGTCTCAGAATTaGTCCATCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFQSQN*SIPNPE
Trigger: CTCTGGGTTTGGGATGGATCAATTCTGAGACTGGAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAACAGGACCTATTCTCTaGCTAGATGTAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSTGPIL*LDVEGI
Trigger: GATCCCCTCTACATCTAGTCAGAGAATAGGTCCTGT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATGCTTTGTAGTCTCCTaGGTCTTCCATCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSCFVVS*VFHPQI
Trigger: GATCTGAGGATGGAAGACGCAGGAGACTACAAAGCA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR GCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTTTACTGTCCTGTGTaGTGGCTTTCCCCATCTTAT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVYCPV*WLSPSY
Trigger: ATAAGATGGGGAAAGCCAGCACACAGGACAGTAAAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTTAGGCACAAGCTATaGCCAGCAGAAGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFRHKL*PAEGFL
Trigger: CAGGAAACCTTCTGCTGGGCATAGCTTGTGCCTAAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAACTGATCCAGGCCCCTaGTCATTTTTCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSTDPGP*SFFMLL
Trigger: GAGAAGCATGAAAAATGAGCAGGGGCCTGGATCAGT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACTGATATTTAATGCTTaGCAGAATTTGATTGCACCA +
Preference number: 4 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTLIFNA*QNLIAP
Trigger: TGGTGCAATCAAATTCTGGCAAGCATTAAATATCAG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCCAGCTTTCCAGATTTaGCAAGGTATTCATATGTCA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINPAFQI*QGIHMS
Trigger: TGACATATGAATACCTTGGCAAATCTGGAAAGCTGG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTACTCTGTGTAATTTTTaGTTTCCCAAGCCGACGATA +
Preference number: 4 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPTLCNF*FPKPTI
Trigger: TATCGTCGGCTTGGGAAACCAAAAATTACACAGAGT...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATTTCATCATAGATTCTaGACTCTGCTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLFHHRF*TLLAGC
Trigger: ACACCCAGCCAGCAGAGTCCAGAATCTATGATGAAA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTCACTGGCTCTTCCTTaGAGGGAAGCACCTTGGACT +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFSLALP*REAPWT
Trigger: AGTCCAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAAATGCCTGTGTAAGCTaGCTGGTGATCTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSNACVS*LVICLW
Trigger: CCACAAACAGATCACCAGCCAGCTTACACAGGCATT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACATGCATGGTGCATCTaGAGAGGTGCTCTGAATACA +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSHAWCI*RGALNT
Trigger: TGTATTCAGAGCACCTCTCCAGATGCACCATGCATG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCAACCTCCACTTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFATSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAAGTGGAGGTTGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTAAAACTGGCACACTTTaGTCTGATACAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSKTGTL*SDTRSC
Trigger: ACAGGATCTTGTATCAGACCAAAGTGTGCCAGTTTT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACACAATTTCATAGCTTaGAGTCCCAGGAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLHNFIA*SPRRFT
Trigger: AGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTCAAGATCCTGTTCCATaGTGCTTTGATTTTATAGAC +
Preference number: 4 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSQDPVP*CFDFID
Trigger: GTCTATAAAATCAAAGCATCATGGAACAGGATCTTG...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAACGCTAAACTTGAGGTaGCTTCTGACATCTATGCAG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSTLNLR*LLTSMQ
Trigger: CTGCATAGATGTCAGAAGTCACCTCAAGTTTAGCGT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAATGAGTGTGCTTATATaGAGCCCACATTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSMSVLI*SPHSAL
Trigger: GAGAGCAGAATGTGGGCTGCATATAAGCACACTCAT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCTAAGAATCATGAGCTaGAACATTCCTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLRIMS*NIPHFL
Trigger: GAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCATGGCAGAGTACAAGTaGATGGCCCTTGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFMAEYK*MALGDK
Trigger: CTTGTCACCAAGGGCCATGCACTTGTACTCTGCCAT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGGATTTTAACTTGCCGTaGTTCTTGGATATTTACAGG +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWDFNLP*FLDIYR
Trigger: CCTGTAAATATCCAAGAACCACGGCAAGTTAAAATC...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTTCATCATAGATTCTaGACTCTGCTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFHHRF*TLLAGC
Trigger: ACACCCAGCCAGCAGAGTCCAGAATCTATGATGAAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTCTCTCAGTCTAACTaGGGAGGCAGATATAGCATC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFSQSN*GGRYSI
Trigger: GATGCTATATCTGCCTCCCCAGTTAGACTGAGAGAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAACAAGGAAAGCAAGTTaGGAGGTCAGAAACAGACCT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSTRKAS*EVRNRP
Trigger: AGGTCTGTTTCTGACCTCCCAACTTGCTTTCCTTGT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAATGACACCTAGCTTCTaGAATACGGTTAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLMTPSF*NTVSGI
Trigger: AATGCCACTAACCGTATTCCAGAAGCTAGGTGTCAT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACACAATTTCATAGCTTaGAGTCCCAGGAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSHNFIA*SPRRFT
Trigger: AGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAATGCTTGCCAGAATTTaGTTGCACCATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSMLARI*LHHAYW
Trigger: CCAATAAGCATGGTGCAATCAAATTCTGGCAAGCAT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTGTTCCATGATGCTTTaGTTTTATAGACCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHCSMML*FYRPLG
Trigger: ACCAAGAGGTCTATAAAATCAAAGCATCATGGAACA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTATCATCCATTCCTTTATaGATTCCCAAAGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLSSIPL*IPKVCK
Trigger: CTTGCAGACTTTGGGAATTCATAAAGGAATGGATGA...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCACAGGACCTATTCTCTaGCTAGATGTAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFTGPIL*LDVEGI
Trigger: GATCCCCTCTACATCTAGTCAGAGAATAGGTCCTGT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACATCTTATTGCAAACATaGCACCTAGCTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHILLQT*HLASGI
Trigger: TATTCCAGAAGCTAGGTGTCATGTTTGCAATAAGAT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTTATTGTGTCCTGCTaGAATGGAGCTTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFIVSC*NGACSL
Trigger: GAGACTACAAGCTCCATTTCAGCAGGACACAATAAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGGCAATGATTTTAACTTaGCGTGGTTCTTGGATATTT +
Preference number: 4 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWAMILT*RGSWIF
Trigger: AAATATCCAAGAACCACGGCAAGTTAAAATCATTGC...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGGCCTATTACAGGTGTaGAAAATATTGATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSGLLQV*KILIPF
Trigger: GAAGGGGATCAATATTTTGCACACCTGTAATAGGCC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTTTATCTGCCTAATTaGAGCCCATTGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLYLPN*SPLLSS
Trigger: GCTGGACAGCAATGGGCTGCAATTAGGCAGATAAAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCTGATATTTAATGCTTaGCAGAATTTGATTGCACCA +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLIFNA*QNLIAP
Trigger: TGGTGCAATCAAATTCTGGCAAGCATTAAATATCAG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTTATTTTTGACAATATaGATAGGGGCATTAGGACAC +
Preference number: 4 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLFLTI*IGALGH
Trigger: GTGTCCTAATGCCCCTATGCATATTGTCAAAAATAA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACCTAAGAATCATGAGCTaGAACATTCCTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LIANMTPSFWNTVSGICHLRIMS*NIPHFL
Trigger: GAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAG...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGTGAGAAATATAAGCTaGTCAGTTCCTTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLVRNIS*SVPFGE
Trigger: CTCTCCAAAAGGAACTGACCAGCTTATATTTCTCAC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACAGGTAAGTAGACTGTaGTATAATAACGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSQVSRL*YNNEGN
Trigger: GTTCCCCTCGTTATTATACCACAGTCTACTTACCTG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACAATATATTTCGCTTTaGACGGGAGGTTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLQYISL*TGGFRR
Trigger: CCTTCTAAAACCTCCCGTCCAAAGCGAAATATATTG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAGGCTGTCATGAGTATTaGCAACAATGTATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSGCHEY*QQCMKH
Trigger: ATGCTTCATACATTGTTGTCAATACTCATGACAGCC...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCAGAATGTTTATGACCTaGAACCCCTGCCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFRMFMT*NPCLSK
Trigger: TTTGGACAGGCAGGGGTTTCAGGTCATAAACATTCT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTCTATTTACTAGGATaGGCTACTGTGATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFYLLG*ATVIQP
Trigger: AGGCTGAATCACAGTAGCTCATCCTAGTAAATAGAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAATCTTATTGCAAACATaGCACCTAGCTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLILLQT*HLASGI
Trigger: TATTCCAGAAGCTAGGTGTCATGTTTGCAATAAGAT...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATTTTCTGACTGTTCATaGTATTACTTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSFSDCS*YYLQLQ
Trigger: CTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTACCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAAC +
Preference number: 4 (lower is better)
Translates to: VFPAFQICQGIHMSALVLPQSEE*FYFRIN
Trigger: GTTTATCCTAAAATAAAACCACTCCTCACTCTGTGG...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAAAAACTGGCACACTTTaGTCTGATACAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSKTGTL*SDTRSC
Trigger: ACAGGATCTTGTATCAGACCAAAGTGTGCCAGTTTT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCACTAGGAACAGCCTCTaGTGTATGCATCCTGATATT +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFTRNSL*CMHPDI
Trigger: AATATCAGGATGCATACATCAGAGGCTGTTCCTAGT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCAAAGATGTTTGGGAATaGGTCTTCAACGCATCCACA +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFKDVWE*VFNAST
Trigger: TGTGGATGCGTTGAAGACTCATTCCCAAACATCTTT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCAAGAGCAGACATTATaGACATCTTCTACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFQEQTL*TSSTLG
Trigger: CCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACCACAGAGTGAGGAGTaGTTTTATTTTAGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSPQSEE*FYFRIN
Trigger: GTTTATCCTAAAATAAAACCACTCCTCACTCTGTGG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp CTTGAATTCAAATACTGTCTTCCCAGCTTTCCAGATTaGCCAAGGTATTCATATGTCAGCCTTAGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LEFKYCLPSFPD*PRYSYVSLSVN
Trigger: GTTAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGACAGTATTTGAATTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCAGATAACGTGTTCATaGATCAGGAGATTCATAGCA +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFQITCS*IRRFIA
Trigger: TGCTATGAATCTCCTGATTCATGAACACGTTATCTG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR GCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTTTTCTGACTGTTCATaGTATTACTTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFFSDCS*YYLQLQ
Trigger: CTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR TCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTGTTCCATGATGCTTTaGTTTTATAGACCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFCSMML*FYRPLG
Trigger: ACCAAGAGGTCTATAAAATCAAAGCATCATGGAACA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CCA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTCATTTGCAAAGATTTaGCCATTTTCCAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFSFAKI*PFSSLR
Trigger: TCTGAGACTGGAAAATGGCCAAATCTTTGCAAATGA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
3UTR CAA 72 bp ACTATTCATTGGGATTTAGGAGTTAGCCGATTATACTaGCTAACACATAAGGGAAACACTTCCTTAAATGAT +
Preference number: 4 (lower is better)
Translates to: TIHWDLGVSRLY*LTHKGNTSLND
Trigger: ATCATTTAAGGAAGTGTTTCCCTTATGTGTTAGCAAGTATAATCGGCTAACTCCTAAATCCCAATGAATAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp ACAAGCAGAAAGAACATAGCCAGCACGCTCAGCAACCCGGTGTGGTaGGTACGGAAGCCCATTGCGATGTCTGCACAGAGCTGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: TSRKNIASTLSNPVW*VRKPIAMSAQSCRA
Trigger: TGCCCGGCAGCTCTGTGCAGACATCGCAATGGGCTTCCGTACTCACCACACCGGGTTGCTGAGCGTGCTGGCTATGTTCTTTCTGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACGCGGTTTCACAACCTaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRRGFTT*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGCG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCCCAAGCCGACAGGTTaGCAGGCAAAGGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: CLCPISKLAQPGYSLIACPKPTG*QAKEQD
Trigger: ATCTTGCTCCTTTGCCTGCAAACCTGTCGGCTTGGG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534968.5
CDS TCA 90 bp GAATGTGGCCCACGTTCAGACCTTGCAGCTCCTCAGAGTGATCTCTaGGACTCACCAGGAGAGATGGGCAGAGCTGGTTACCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: ECGPRSDLAAPQSDL*DSPGEMGRAGYLHR
Trigger: TCTGTGCAGGTAACCAGCTCTGCCCATCTCTCCTGGTGAGTCTCAGAGATCACTCTGAGGAGCTGCAAGGTCTGAACGTGGGCCACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368047.3
CDS GCA 90 bp GTGATCTCTGAGACTCACCAGGAGAGATGGGCAGAGCTGGTTACCTaGACAGAGCTGCCGGGCAGAGATGGAGTCAGAATTGTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VISETHQERWAELVT*TELPGRDGVRIVAD
Trigger: GTCAGCAACAATTCTGACTCCATCTCTGCCCGGCAGCTCTGTGCAGGTAACCAGCTCTGCCCATCTCTCCTGGTGAGTCTCAGAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368047.3
CDS-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTCGTGTAAGTCAGCTCTaGGTCCTCAGGAGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: CLCPISKLAQPGYSLIACRVSQL*VLRSLE
Trigger: TTCCAGACTCCTGAGGACCAAGAGCTGACTTACACG...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp TGTCTGCACAGAGCTGCCGGGCAGAGATGGAGTCAGAATTGTTGCTaGCAGGGTTCTGGGCTGTACACGTGTAAGTCAGCTCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: CLHRAAGQRWSQNCC*QGSGLYTCKSALGP
Trigger: AGGACCAAGAGCTGACTTACACGTGTACAGCCCAGAACCCTGTCAGCAACAATTCTGACTCCATCTCTGCCCGGCAGCTCTGTGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTTGGAGGGAAGCACCTaGGACTGCAGGATTTCATCA +
Preference number: 5 (lower is better)
Translates to: CLCPISKLAQPGYSLIACLEGST*DCRISS
Trigger: TGATGAAATCCTGCAGTCCAAGGTGCTTCCCTCCAA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAAAGGCATGGGAGGATTaGGTGGGTGTGTGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTKAWED*VGVWAH
Trigger: ATGGGCCCACACACCCACCAAATCCTCCCATGCCTT...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGAGATGGAGTCAGAATaGTTGCTGACAGGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTREMESE*LLTGFW
Trigger: CCAGAACCCTGTCAGCAACAATTCTGACTCCATCTC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGAGTACGGAAGCCCATaGCGATGTCTGCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTEYGSP*RCLHRA
Trigger: AGCTCTGTGCAGACATCGCAATGGGCTTCCGTACTC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTGGCTGGTGATCTGTTaGTGGGGCATGCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINWLVIC*WGMPGW
Trigger: CCACCCTGGCATGCCCCACAAACAGATCACCAGCCA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTGGCTGGTGATCTGTTaGTGGGGCATGCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSWLVIC*WGMPGW
Trigger: CCACCCTGGCATGCCCCACAAACAGATCACCAGCCA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACCTGCACGTCTCTTCTaGGGGTGCTGTCTTTCACCT +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTPARLF*GCCLSP
Trigger: AGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGACACAAGGAAAGCAAGTaGGGAGGTCAGAAACAGACC +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRHKESK*GGQKQT
Trigger: GGTCTGTTTCTGACCTCCCAACTTGCTTTCCTTGTG...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAACCCAGCCCCTGGAGTaGAATCCTGGCTTTTCTATT +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRTQPLE*NPGFSI
Trigger: AATAGAAAAGCCAGGATTCAACTCCAGGGGCTGGGT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACACCTAATTGCAGCCCATaGCTGTCCAGCCTAGGACTA +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTPNCSP*LSSLGL
Trigger: TAGTCCTAGGCTGGACAGCAATGGGCTGCAATTAGG...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTTTTTCAGCAGGAAAGTaGAGTGGTTATCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: CLCPISKLAQPGYSLIACFSAGK*SGYPDS
Trigger: GCTATCTGGATAACCACTCAACTTTCCTGCTGAAAA...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGACTTGTACAGGGCTGTaGAGAACTGTCTGGGCAATC +
Preference number: 5 (lower is better)
Translates to: GETRVGCPESKGYLQNSWTCTGL*RTVWAI
Trigger: GATTGCCCAGACAGTTCTCAACAGCCCTGTACAAGT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAAGGCATGGGAGGATTaGGTGGGTGTGTGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINKAWED*VGVWAH
Trigger: ATGGGCCCACACACCCACCAAATCCTCCCATGCCTT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS GCA 90 bp GTAGCGCTTGGTGGTGGTGTAGGGATCAGCCTGTGTATTTATGTCTaGTTTGTAGTCTCCTGCGTCTTCCATCCTCAGATCGCTAATGAC +
Preference number: 5 (lower is better)
Translates to: VALGGGVGISLCIYV*FVVSCVFHPQIAND
Trigger: GTCATTAGCGATCTGAGGATGGAAGACGCAGGAGACTACAAAGCAGACATAAATACACAGGCTGATCCCTACACCACCACCAAGCGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS-3UTR CAA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGTGCTTCCGGCCAGGTTaGCAGGCAAAGGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWCFRPG*QAKEQD
Trigger: ATCTTGCTCCTTTGCCTGCAAACCTGGCCGGAAGCA...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAGGAGTCTGGAAGATTaGAAGGACATTACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRRSLED*KDITLF
Trigger: GAAGAGGGTAATGTCCTTCAAATCTTCCAGACTCCT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGAGATGGAGTCAGAATaGTTGCTGACAGGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTEMESE*LLTGFW
Trigger: CCAGAACCCTGTCAGCAACAATTCTGACTCCATCTC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGAGTACGGAAGCCCATaGCGATGTCTGCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPEYGSP*RCLHRA
Trigger: AGCTCTGTGCAGACATCGCAATGGGCTTCCGTACTC...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACGAGTACGGAAGCCCATaGCGATGTCTGCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINEYGSP*RCLHRA
Trigger: AGCTCTGTGCAGACATCGCAATGGGCTTCCGTACTC...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGCTGAGATGTGGCAGTTaGCAATCTCCCAGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: GETRVGCPESKGYLQNSWLRCGS*QSPSKS
Trigger: ACTCTTACTGGGAGATTGCAAACTGCCACATCTCAG...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TGCCTGTGCCCGATTTCCAAGCTGGCCCAACCAGGCTATTCCCTCATAGCCTGTGTACATTTTCCTAATTaGCTCAAGATGCGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: CLCPISKLAQPGYSLIACVHFPN*LKMRGE
Trigger: TTCACCACGCATCTTGAGCAAATTAGGAAAATGTAC...ACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTAGTACAGATGGGGTTTaGCCATGCTGGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSSTDGV*PCWPGS
Trigger: GGATCCTGGCCAGCATGGCAAAACCCCATCTGTACT...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp CATGTTCTGGGCCCACCAGCTACTGGTGATCTCAGGAATGGATTCTaGAGACCATTCAGGGTAATGTCATACCATCCTCAGAGCCATCAT +
Preference number: 5 (lower is better)
Translates to: HVLGPPATGDLRNGF*RPFRVMSYHPQSHH
Trigger: ATGATGGCTCTGAGGATGGTATGACATTACCCTGAATGGTCTTCAGAATCCATTCCTGAGATCACCAGTAGCTGGTGGGCCCAGAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 90 bp CCCCATCTTATCAGCAAACTGCACTTCGGAATAAACTGTGTTCACTaGCTCTTCCTTGGAGGGAAGCACCTTGGACTGCAGGATTTCATC +
Preference number: 5 (lower is better)
Translates to: PHLISKLHFGINCVH*LFLGGKHLGLQDFI
Trigger: GATGAAATCCTGCAGTCCAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTATTCCGAAGTGCAGTTTGCTGATAAGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311224.8
ENST00000368048.7
ENST00000368054.8
ENST00000466767.1
ENST00000534968.5
CDS CCA 90 bp GAAGCACAGCTTGTTCATGTATGTACTAAGCTCGAACCCATGTTCTaGGCCCACCAGCTACTGGTGATCTCAGGAATGGATTCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: EAQLVHVCTKLEPMF*AHQLLVISGMDSED
Trigger: GTCTTCAGAATCCATTCCTGAGATCACCAGTAGCTGGTGGGCCCAGAACATGGGTTCGAGCTTAGTACATACATGAACAAGCTGTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 90 bp TGGAGATCCTCTAGTCCAAACATTTCACATGTGAGGGCCCTGAGCTaGAAAGGTGAACACACTCGTACAGTGAAGCACAGCTTGTTCATG +
Preference number: 5 (lower is better)
Translates to: WRSSSPNISHVRALS*KGEHTRTVKHSLFM
Trigger: CATGAACAAGCTGTGCTTCACTGTACGAGTGTGTTCACCTTTCCAGCTCAGGGCCCTCACATGTGAAATGTTTGGACTAGAGGATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 90 bp AAGAAAGGAAGCCCCCAGGGATTAAATGGCTGCCATCCTTTGAAATaGATGCTTGGATCCTCAGAATGTCTCAGGAGTCACTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KKGSPQGLNGCHPLK*MLGSSECLRSHLAE
Trigger: CTCAGCCAAGTGACTCCTGAGACATTCTGAGGATCCAAGCATCCATTTCAAAGGATGGCAGCCATTTAATCCCTGGGGGCTTCCTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466767.1
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAAACTTGCCGTGGTTCTaGGATATTTACAGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRNLPWF*DIYRES
Trigger: ACTTTCCCTGTAAATATCCAAGAACCACGGCAAGTT...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAGGAGTCTGGAAGATTaGAAGGACATTACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GETRVGCPESKGYLQNSWRSLED*KDITLF
Trigger: GAAGAGGGTAATGTCCTTCAAATCTTCCAGACTCCT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTCGTGTAAGTCAGCTCTaGGTCCTCAGGAGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPRVSQL*VLRSLE
Trigger: TTCCAGACTCCTGAGGACCAAGAGCTGACTTACACG...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGATCACAATTTCATAGCTaGAAGTCCCAGGAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRSQFHS*KSQEVY
Trigger: GTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGA...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GGAGAGACAAGAGTAGGGTGTCCTGAGTCCAAAGGCTACCTTCAGAATTCCTGGAGTGAGCAATCTTGCTaGTTTATCCCAGTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: GETRVGCPESKGYLQNSWSEQSC*FIPVCH
Trigger: ATGGCACACTGGGATAAACAAGCAAGATTGCTCACT...CCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGTACAGATGGGGTTTaGCCATGCTGGCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSTDGV*PCWPGS
Trigger: GGATCCTGGCCAGCATGGCAAAACCCCATCTGTACT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACCCCAAACCCAGAGACTaGTACAGGGCTGTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINPKPRD*YRAVEN
Trigger: GTTCTCAACAGCCCTGTACAAGTCTCTGGGTTTGGG...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS CCA 90 bp TTGGTTTCCCAAGCCGACGATAGATTTGCAGGTTGTAGCGCTTGGTaGTGGTGTAGGGATCAGCCTGTGTATTTATGTCTGCTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: LVSQADDRFAGCSAW*WCRDQPVYLCLLCS
Trigger: ACTACAAAGCAGACATAAATACACAGGCTGATCCCTACACCACCACCAAGCGCTACAACCTGCAAATCTATCGTCGGCTTGGGAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS-3UTR CAA 90 bp CCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCAAGCCGACGATAGATTaGCAGGTTGTAGCGCTTGGT +
Preference number: 5 (lower is better)
Translates to: PRSQFHSLKSQEVYCPVCKPTID*QVVALG
Trigger: ACCAAGCGCTACAACCTGCAAATCTATCGTCGGCTT...GCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGAGATGGAGTCAGAATaGTTGCTGACAGGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPEMESE*LLTGFW
Trigger: CCAGAACCCTGTCAGCAACAATTCTGACTCCATCTC...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACTTGGAGGGAAGCACCTaGGACTGCAGGATTTCATCA +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINLEGST*DCRISS
Trigger: TGATGAAATCCTGCAGTCCAAGGTGCTTCCCTCCAA...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGCTGGTCAGTTCCTTTaGGAGAGTGGGAATACTGGG +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHAGQFL*ESGNTG
Trigger: CCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GCCCAAGGTGTCTGCAGGCAGGACTGTCCTAACCTACTAGAACTTTCCACCAGAGTTAGCCGATTATACTaGCTAACACATAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: AQGVCRQDCPNLLELSTRVSRLY*LTHKGN
Trigger: GTTTCCCTTATGTGTTAGCAAGTATAATCGGCTAAC...TCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTGGGGTTTCACCATGTaGGCCAGACTAATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSWGFTM*ARLISN
Trigger: GTTCGAGATTAGTCTGGCCAACATGGTGAAACCCCA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACATTTCCAGTCTCAGAATaGATCCATCCCAAACCCAGA +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTFPVSE*IHPKPR
Trigger: TCTGGGTTTGGGATGGATCAATTCTGAGACTGGAAA...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp TATGTACTAAGCTCGAACCCATGTTCTGGGCCCACCAGCTACTGGTaGTCTCAGGAATGGATTCTGAAGACCATTCAGGGTAATGTCATA +
Preference number: 5 (lower is better)
Translates to: YVLSSNPCSGPTSYW*SQEWILKTIQGNVI
Trigger: TATGACATTACCCTGAATGGTCTTCAGAATCCATTCCTGAGATCACCAGTAGCTGGTGGGCCCAGAACATGGGTTCGAGCTTAGTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 90 bp TTTTTGGTTTCCCAAGCCGACGATAGATTTGCAGGTTGTAGCGCTTaGTGGTGGTGTAGGGATCAGCCTGTGTATTTATGTCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: FLVSQADDRFAGCSA*WWCRDQPVYLCLLC
Trigger: ACAAAGCAGACATAAATACACAGGCTGATCCCTACACCACCACCAAGCGCTACAACCTGCAAATCTATCGTCGGCTTGGGAAACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCATGCTTCCGGCCAGGTTaGCAGGCAAAGGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSCFRPG*QAKEQD
Trigger: ATCTTGCTCCTTTGCCTGCAAACCTGGCCGGAAGCA...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CAA 90 bp CAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTTGGAGGGAAGCACCTaGTCTTCTCTTGAACAAACG +
Preference number: 5 (lower is better)
Translates to: QPRSQFHSLKSQEVYCPVLEGST*SSLEQT
Trigger: CGTTTGTTCAAGAGAAGACAAGGTGCTTCCCTCCAA...CACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACGTGTCTGTGCTGGAATaGTCTCCTGAGCTACACAAG +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHVSVLE*SPELHK
Trigger: CTTGTGTAGCTCAGGAGACAATTCCAGCACAGACAC...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTGGGGTTTCACCATGTaGGCCAGACTAATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHWGFTM*ARLISN
Trigger: GTTCGAGATTAGTCTGGCCAACATGGTGAAACCCCA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACTTGTACAGGGCTGTaGAGAACTGTCTGGGCAATC +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTCTGL*RTVWAI
Trigger: GATTGCCCAGACAGTTCTCAACAGCCCTGTACAAGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACACCCAGCCCCTGGAGTaGAATCCTGGCTTTTCTATT +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHTQPLE*NPGFSI
Trigger: AATAGAAAAGCCAGGATTCAACTCCAGGGGCTGGGT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGAGGAGTCTGGAAGATTaGAAGGACATTACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWRSLED*KDITLF
Trigger: GAAGAGGGTAATGTCCTTCAAATCTTCCAGACTCCT...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp TTTCCTAATTTGCTCAAGATGCGTGGTGAAGGCCACGCACCAGGGATCTTCACAGTACATTTTCCTAATTaGCTCAAGATGCGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: FPNLLKMRGEGHAPGIFTVHFPN*LKMRGE
Trigger: TTCACCACGCATCTTGAGCAAATTAGGAAAATGTAC...TGTGAAGATCCCTGGTGCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTTGTTCATGCTATTACTaGCAGCTGCAGTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSCSCYY*QLQFSV
Trigger: AACGCTGAACTGCAGCTGCAAGTAATAGCATGAACA...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACTGGACCCCTCACACTaGGATGGGGGCTTATTTAAG +
Preference number: 5 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSLDPSH*DGGLFK
Trigger: CTTAAATAAGCCCCCATCCAAGTGTGAGGGGTCCAG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACCCAAACCCAGAGACTaGTACAGGGCTGTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSPKPRD*YRAVEN
Trigger: GTTCTCAACAGCCCTGTACAAGTCTCTGGGTTTGGG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp GAGGGAAGCACCTTGTCTTCTCTTGAACAAACGGAACAAAAACACTaGAGACAGAATGAGAACAAGCAGAAAGAACATAGCCAGCACGCT +
Preference number: 5 (lower is better)
Translates to: EGSTLSSLEQTEQKH*RQNENKQKEHSQHA
Trigger: AGCGTGCTGGCTATGTTCTTTCTGCTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGGTGCTTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS GCA 90 bp TCTCTTTTTAAGATGAAGAAAGGAAGCCCCCAGGGATTAAATGGCTaGCATCCTTTGAAATGGATGCTTGGATCCTCAGAATGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SLFKMKKGSPQGLNG*HPLKWMLGSSECLR
Trigger: CCTGAGACATTCTGAGGATCCAAGCATCCATTTCAAAGGATGGCAGCCATTTAATCCCTGGGGGCTTCCTTTCTTCATCTTAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466767.1
CDS-3UTR CAA 90 bp AGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGGAACTTGCCGTGGTTCTaGGATATTTACAGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: RSQFHSLKSQEVYCPVCWNLPWF*DIYRES
Trigger: ACTTTCCCTGTAAATATCCAAGAACCACGGCAAGTT...CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTTCACAATTTCATAGCTaGAAGTCCCAGGAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPSQFHS*KSQEVY
Trigger: GTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGA...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTGCACCTTGTCTTCTCTaGAACAAACGGAACAAAAAC +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPAPCLL*NKRNKN
Trigger: GTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGGTGC...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGGGAACCTGCCAGTATaGGTGGTTGTAACTCAGTTT +
Preference number: 5 (lower is better)
Translates to: VFPAFQICQGIHMSALVLGNLPV*VVVTQF
Trigger: AAACTGAGTTACAACCACCAATACTGGCAGGTTCCC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTGTTCATGCTATTACTaGCAGCTGCAGTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHCSCYY*QLQFSV
Trigger: AACGCTGAACTGCAGCTGCAAGTAATAGCATGAACA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCCTGCACGTCTCTTCTaGGGGTGCTGTCTTTCACCT +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFPARLF*GCCLSP
Trigger: AGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp CAAGCAGGAACCTTGTCTTCTCTTGAACAAACGGAACAAAAACACTaGAGACAGAATGAGAACAAGCAGAAAGAACATAGCCAGCACGCT +
Preference number: 5 (lower is better)
Translates to: QAGTLSSLEQTEQKH*RQNENKQKEHSQHA
Trigger: AGCGTGCTGGCTATGTTCTTTCTGCTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGGTTCCTGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368048.7
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCGTGTAAGTCAGCTCTaGGTCCTCAGGAGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFRVSQL*VLRSLE
Trigger: TTCCAGACTCCTGAGGACCAAGAGCTGACTTACACG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTCACAATTTCATAGCTaGAAGTCCCAGGAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSQFHS*KSQEVY
Trigger: GTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGCATCTTGTCTTCTCTaGAACAAACGGAACAAAAAC +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSASCLL*NKRNKN
Trigger: GTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGATGC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CCAGTTTCATCATCTGCACCATCATCTCCCAAGTTCCTTCTGGAGAATGACTCTGTTAGCCGATTATACTaGCTAACACATAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PVSSSAPSSPKFLLENDSVSRLY*LTHKGN
Trigger: GTTTCCCTTATGTGTTAGCAAGTATAATCGGCTAAC...AGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CATGCACAGGCACATTCCTGTATGAGCAACACCTCATTTAATCCCCACATCAACAATGCTTGCCAGAATTaGATTGCACCATGCTTATTG +
Preference number: 5 (lower is better)
Translates to: HAQAHSCMSNTSFNPHINNACQN*IAPCLL
Trigger: CAATAAGCATGGTGCAATCAAATTCTGGCAAGCATT...GTTGATGTGGGGATTAAATGAGGTGTTGCTCATACAGGAATGTGCCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACTTTTCAGCAGGAAAGTaGAGTGGTTATCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHFSAGK*SGYPDS
Trigger: GCTATCTGGATAACCACTCAACTTTCCTGCTGAAAA...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCTGGACCCCTCACACTaGGATGGGGGCTTATTTAAG +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFLDPSH*DGGLFK
Trigger: CTTAAATAAGCCCCCATCCAAGTGTGAGGGGTCCAG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CAGCAGCCTAGATCACAATTTCATAGCTTGAAGTCCCAGGAGGTTTACTGTCCTAGCAATGATTTTAACTaGCCGTGGTTCTTGGATATT +
Preference number: 5 (lower is better)
Translates to: QQPRSQFHSLKSQEVYCPSNDFN*PWFLDI
Trigger: AATATCCAAGAACCACGGCAAGTTAAAATCATTGCT...AGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCAAGCCGACGATAGATTaGCAGGTTGTAGCGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFKPTID*QVVALG
Trigger: ACCAAGCGCTACAACCTGCAAATCTATCGTCGGCTT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368054.8
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCACAAGGAAAGCAAGTaGGGAGGTCAGAAACAGACC +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFHKESK*GGQKQT
Trigger: GGTCTGTTTCTGACCTCCCAACTTGCTTTCCTTGTG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp CTTATTGCAAACATGACACCTAGCTTCTGGAATACGGTTAGTGGCATTTGCCACAGCCATATAGAGAAGTaGGAATTGACAGGACCTATT +
Preference number: 5 (lower is better)
Translates to: LIANMTPSFWNTVSGICHSHIEK*ELTGPI
Trigger: AATAGGTCCTGTCAATTCCAACTTCTCTATATGGCT...GTGGCAAATGCCACTAACCGTATTCCAGAAGCTAGGTGTCATGTTTGCAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGCTACTACTCTGTACTaGTGTGCCAAATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: VFPAFQICQGIHMSALVLATTLY*CAKCCK
Trigger: TTTACAGCATTTGGCACACAAGTACAGAGTAGTAGC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCCAGGTGTGCAAAATATaGATCCCCTTCTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFQVCKI*IPFSHS
Trigger: ACTGTGGGAGAAGGGGATCAATATTTTGCACACCTG...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCACACTGTCATCTGTGTTaGGACTTACTAAGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSHCHLC*DLLSLL
Trigger: TAACAGGCTTAGTAAGTCCAAACACAGATGACAGTG...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTTTCCAGATTTGCCAAGGTATTCATATGTCAGCCTTAGTGTTAGCAAGGTCTTCTATTTaGATGGTTGGATTATACCCA +
Preference number: 5 (lower is better)
Translates to: VFPAFQICQGIHMSALVLARSSI*MVGLYP
Trigger: TGGGTATAATCCAACCATCAAAATAGAAGACCTTGC...TAACACTAAGGCTGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 90 bp TTCATAATAATTTCTGTGGGTCACAGTAACTACGGGTGCTGTTTCTaGGTCTCCTGGTGTTACATAAGCAACAGATGTTTTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: FIIISVGHSNYGCCF*VSWCYISNRCFRSP
Trigger: TGGACTTCTAAAACATCTGTTGCTTATGTAACACCAGGAGACTCAGAAACAGCACCCGTAGTTACTGTGACCCACAGAAATTATTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCTTTCCAGTCTCAGAATaGATCCATCCCAAACCCAGA +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFFPVSE*IHPKPR
Trigger: TCTGGGTTTGGGATGGATCAATTCTGAGACTGGAAA...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp TCTTCTAAGAATCATGAGCTGCAACATTCCTCATTTTCTCAGTTGAGTCCCTCAAGCCATATAGAGAAGTaGGAATTGACAGGACCTATT +
Preference number: 5 (lower is better)
Translates to: SSKNHELQHSSFSQLSPSSHIEK*ELTGPI
Trigger: AATAGGTCCTGTCAATTCCAACTTCTCTATATGGCT...TGAGGGACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCTACTACTCTGTACTaGTGTGCCAAATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFATTLY*CAKCCK
Trigger: TTTACAGCATTTGGCACACAAGTACAGAGTAGTAGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCGCAAGGTCTTCTATTTaGATGGTTGGATTATACCCA +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFARSSI*MVGLYP
Trigger: TGGGTATAATCCAACCATCAAAATAGAAGACCTTGC...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS-3UTR CAA 90 bp GTCAGAGCCCACATTTATGACCACTCATTATATTTCCTCTTATTGTCTTTGTTCAATGCTTGCCAGAATTaGATTGCACCATGCTTATTG +
Preference number: 5 (lower is better)
Translates to: VRAHIYDHSLYFLLLSLFNACQN*IAPCLL
Trigger: CAATAAGCATGGTGCAATCAAATTCTGGCAAGCATT...GAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368054.8
ENST00000534968.5
CDS TCA 72 bp AAGAACATAGCCAGCACGCTCAGCAACCCGGTGTGGTaGGTACGGAAGCCCATTGCGATGTCTGCACAGAGC +
Preference number: 6 (lower is better)
Translates to: KNIASTLSNPVW*VRKPIAMSAQS
Trigger: GCTCTGTGCAGACATCGCAATGGGCTTCCGTACTCACCACACCGGGTTGCTGAGCGTGCTGGCTATGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
ENST00000534968.5
CDS TCA 72 bp CCACGTTCAGACCTTGCAGCTCCTCAGAGTGATCTCTaGGACTCACCAGGAGAGATGGGCAGAGCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: PRSDLAAPQSDL*DSPGEMGRAGY
Trigger: GTAACCAGCTCTGCCCATCTCTCCTGGTGAGTCTCAGAGATCACTCTGAGGAGCTGCAAGGTCTGAACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368047.3
CDS TCA 72 bp GGCCCACCAGCTACTGGTGATCTCAGGAATGGATTCTaGAGACCATTCAGGGTAATGTCATACCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: GPPATGDLRNGF*RPFRVMSYHPQ
Trigger: CTGAGGATGGTATGACATTACCCTGAATGGTCTTCAGAATCCATTCCTGAGATCACCAGTAGCTGGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 72 bp GCCGACGATAGATTTGCAGGTTGTAGCGCTTGGTGGTaGTGTAGGGATCAGCCTGTGTATTTATGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: ADDRFAGCSAWW*CRDQPVYLCLL
Trigger: AAGCAGACATAAATACACAGGCTGATCCCTACACCACCACCAAGCGCTACAACCTGCAAATCTATCGTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS CCA 72 bp TCCCAAGCCGACGATAGATTTGCAGGTTGTAGCGCTTaGTGGTGGTGTAGGGATCAGCCTGTGTATTTATGT +
Preference number: 6 (lower is better)
Translates to: SQADDRFAGCSA*WWCRDQPVYLC
Trigger: ACATAAATACACAGGCTGATCCCTACACCACCACCAAGCGCTACAACCTGCAAATCTATCGTCGGCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS CCA 72 bp TCTAGTCCAAACATTTCACATGTGAGGGCCCTGAGCTaGAAAGGTGAACACACTCGTACAGTGAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: SSPNISHVRALS*KGEHTRTVKHS
Trigger: GCTGTGCTTCACTGTACGAGTGTGTTCACCTTTCCAGCTCAGGGCCCTCACATGTGAAATGTTTGGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 72 bp AGCCCCCAGGGATTAAATGGCTGCCATCCTTTGAAATaGATGCTTGGATCCTCAGAATGTCTCAGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SPQGLNGCHPLK*MLGSSECLRSH
Trigger: GTGACTCCTGAGACATTCTGAGGATCCAAGCATCCATTTCAAAGGATGGCAGCCATTTAATCCCTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466767.1
CDS CCA 72 bp CTTGTTCATGTATGTACTAAGCTCGAACCCATGTTCTaGGCCCACCAGCTACTGGTGATCTCAGGAATGGAT +
Preference number: 6 (lower is better)
Translates to: LVHVCTKLEPMF*AHQLLVISGMD
Trigger: ATCCATTCCTGAGATCACCAGTAGCTGGTGGGCCCAGAACATGGGTTCGAGCTTAGTACATACATGAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CCA 72 bp GCACTTCGGAATAAACTGTGTTCACTGGCTCTTCCTTaGAGGGAAGCACCTTGTCTTCTCTTGAACAAACGG +
Preference number: 6 (lower is better)
Translates to: ALRNKLCSLALP*REAPCLLLNKR
Trigger: CCGTTTGTTCAAGAGAAGACAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTATTCCGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368051.3
CDS CAA 72 bp AATTCAGCCCAGCAGCCTAGATCACAATTTCATAGCTaGAAGTCCCAGGAGGTTTACTGTCCTGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: NSAQQPRSQFHS*KSQEVYCPVCW
Trigger: CCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTGGGCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368054.8
ENST00000466767.1
ENST00000534968.5
CDS CAA 72 bp AAAGGAAGCCCCCAGGGATTAAATGGCTGCCATCCTTaGAAATGGATGCTTGGATCCTCAGAATGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: KGSPQGLNGCHP*KWMLGSSECLR
Trigger: CCTGAGACATTCTGAGGATCCAAGCATCCATTTCAAAGGATGGCAGCCATTTAATCCCTGGGGGCTTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466767.1
CDS TCA 72 bp AAACATTTCACATGTGAGGGCCCTGAGCTGGAAAGGTaGACACACTCGTACAGTGAAGCACAGCTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: KHFTCEGPELER*THSYSEAQLVH
Trigger: ATGAACAAGCTGTGCTTCACTGTACGAGTGTGTTCACCTTTCCAGCTCAGGGCCCTCACATGTGAAATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS GCA 72 bp AAGATGAAGAAAGGAAGCCCCCAGGGATTAAATGGCTaGCATCCTTTGAAATGGATGCTTGGATCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: KMKKGSPQGLNG*HPLKWMLGSSE
Trigger: TTCTGAGGATCCAAGCATCCATTTCAAAGGATGGCAGCCATTTAATCCCTGGGGGCTTCCTTTCTTCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466767.1
CDS TCA 72 bp TTGGATAAATGGCTTCAGTCCCAGGAGGAGAGAAGGTaGGTTTCCACATTTTACCTTCTGGGAAAATCCTAC +
Preference number: 6 (lower is better)
Translates to: LDKWLQSQEERR*VSTFYLLGKSY
Trigger: GTAGGATTTTCCCAGAAGGTAAAATGTGGAAACTCACCTTCTCTCCTCCTGGGACTGAAGCCATTTATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS CAA 72 bp TGGAAAGGTGAACACACTCGTACAGTGAAGCACAGCTaGTTCATGTATGTACTAAGCTCGAACCCATGTTCT +
Preference number: 6 (lower is better)
Translates to: WKGEHTRTVKHS*FMYVLSSNPCS
Trigger: AGAACATGGGTTCGAGCTTAGTACATACATGAACAAGCTGTGCTTCACTGTACGAGTGTGTTCACCTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360056.7
CDS TCA 72 bp ATTTCTGTGGGTCACAGTAACTACGGGTGCTGTTTCTaGGTCTCCTGGTGTTACATAAGCAACAGATGTTTT +
Preference number: 6 (lower is better)
Translates to: ISVGHSNYGCCF*VSWCYISNRCF
Trigger: AAAACATCTGTTGCTTATGTAACACCAGGAGACTCAGAAACAGCACCCGTAGTTACTGTGACCCACAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS CCA 72 bp GAAGTCCAAGCAATGATTTTAACTTGCCGTGGTTCTTaGATATTTACAGGGAAAGTGACTGACTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: EVQAMILTCRGS*IFTGKVTDSPR
Trigger: TCTGGGAGAGTCAGTCACTTTCCCTGTAAATATCCAAGAACCACGGCAAGTTAAAATCATTGCTTGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311224.8
ENST00000360056.7
ENST00000368047.3
ENST00000368048.7
ENST00000368051.3
ENST00000368054.8
CDS CCA 72 bp TTCATGTTTCTGACACTTACCACTGACTGTCTTGCATaGCTAGTTGACTTTCCATGTCACGGTCTTAGTTTT +
Preference number: 6 (lower is better)
Translates to: FMFLTLTTDCLA*LVDFPCHGLSF
Trigger: AAAACTAAGACCGTGACATGGAAAGTCAACTAGCCATGCAAGACAGTCAGTGGTAAGTGTCAGAAACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466767.1