Pregenerated sensors for CD83 (Homo sapiens)
Ensembl gene IDs: ENSG00000112149Ensembl transcript IDs: ENST00000379153.4, ENST00000612003.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTACAATGGAGAAAGCAGACACCAGAAGGAACTTGCTCAAGATCATaGACCCAGATAGTGGGACAAGTGGGCGAGCACCCAGACTGCACC | + |
|
Preference number: 1 (lower is better) Translates to: LQWRKQTPEGTCSRS*TQIVGQVGEHPDCT Trigger: GGTGCAGTCTGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTCTGCTTTCTCCATTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR GCA 90 bp | CAGCCTTGTGGTTTACAATGGAGAAAGCAGACACCAGAAGGAACTTaGTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: QPCGLQWRKQTPEGT*SRSCTQIVGQVGEH Trigger: GTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTCTGCTTTCTCCATTGTAAACCACAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR TCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTATGCTATGTGGTCATGTaGTGGTTTTCGAGGCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: REVPSASGSRVSISWSVLCYVVM*WFSRPA Trigger: GGCAGGCCTCGAAAACCATCACATGACCACATAGCA...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGGGCGAGCACCCAGACTaGACCGTCAGCCCAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: DLASSLPQKNSYRRLQERGEHPD*TVSPAF Trigger: AAATGCTGGGCTGACGGTGCAGTCTGGGTGCTCGCC...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCAAAGGACTTCACAGGATaGCATCTTCAGCGTAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPKDFTG*HLQRRL Trigger: GAGCCTACGCTGAAGATGGCATCCTGTGAAGTCCTT...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR TCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTAAAATGTCCAGGAGGTTaGCCAGATAGCTGCATACAT | + |
|
Preference number: 2 (lower is better) Translates to: REVPSASGSRVSISWSVLKCPGG*PDSCIH Trigger: ATGTATGCAGCTATCTGGTCAACCTCCTGGACATTT...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR CAA 90 bp | ACAGCCTTGTGGTTTACAATGGAGAAAGCAGACACCAGAAGGAACTaGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TALWFTMEKADTRRN*LKIMHPDSGTSGRA Trigger: TGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTCTGCTTTCTCCATTGTAAACCACAAGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTCTGTCACGGGCCAGCTaGGGGCATTCATATTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPQKNSYRRLQERLLGLSRAS*GHSYFP Trigger: TGGGAAATATGAATGCCCCCAGCTGGCCCGTGACAG...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTTGCTATGTGGTCATGTaGTGGTTTTCGAGGCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSLPQKNSYRRLQERLLGCYVVM*WFSRPA Trigger: GGCAGGCCTCGAAAACCATCACATGACCACATAGCA...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTACACCAGAAGGAACTTaGTCAAGATCATGCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSLPQKNSYRRLQERLLGTPEGT*SRSCTQ Trigger: CTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGT...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTCCTGCCCACAGAAAATaGGGTGGGATCCCCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVPAHRK*GGIPFQ Trigger: CTGGAAGGGGATCCCACCCCATTTTCTGTGGGCAGG...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTTCATTGTACAGATTATGTAATCACCCAGGTATTAAGCCTAGTAACCATTCCTGCCCACAGAAAATaGGGTGGGATCCCCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GVHCTDYVITQVLSLVTIPAHRK*GGIPFQ Trigger: CTGGAAGGGGATCCCACCCCATTTTCTGTGGGCAGG...AATGGTTACTAGGCTTAATACCTGGGTGATTACATAATCTGTACAATGAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTATGAAAAGACCCTGCTaGGGAATAGTTCATCGACTT | + |
|
Preference number: 2 (lower is better) Translates to: SSLPQKNSYRRLQERLLGMKRPC*GIVHRL Trigger: AAGTCGATGAACTATTCCCCAGCAGGGTCTTTTCAT...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTCCTTGTGGTTTACAATaGAGAAAGCAGACACCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPQKNSYRRLQERLLGPCGLQ*RKQTPE Trigger: TTCTGGTGTCTGCTTTCTCCATTGTAAACCACAAGG...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTCTGTCACGGGCCAGCTaGGGGCATTCATATTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTLSRAS*GHSYFP Trigger: TGGGAAATATGAATGCCCCCAGCTGGCCCGTGACAG...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTAAGGACTTCACAGGATaGCATCTTCAGCGTAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTKDFTG*HLQRRL Trigger: GAGCCTACGCTGAAGATGGCATCCTGTGAAGTCCTT...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTCAGATGAAAAGACCCTaGTGGGGAATAGTTCATCGA | + |
|
Preference number: 2 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVQMKRP*WGIVHR Trigger: TCGATGAACTATTCCCCAGCAGGGTCTTTTCATCTG...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCCGTGTGTCCATATCTTaGAGTGTGTTAGGCTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: YVITQVLSLVTITHFSYPRVSIS*SVLGYC Trigger: GCAGTAGCCTAACACACTCCAAGATATGGACACACG...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR GCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCACTTGCTCAAGATCATaGACCCAGATAGTGGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: YVITQVLSLVTITHFSYPTCSRS*TQIVGQ Trigger: TTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTATGAAAAGACCCTGCTaGGGAATAGTTCATCGACTT | + |
|
Preference number: 2 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVMKRPC*GIVHRL Trigger: AAGTCGATGAACTATTCCCCAGCAGGGTCTTTTCAT...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTTGGCCTCATGCTATGTaGTCATGTGATGGTTTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTWPHAM*SCDGFR Trigger: TCGAAAACCATCACATGACCACATAGCATGAGGCCA...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCCATGCAACAGCCTTGTaGTTTACAATGGAGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YVITQVLSLVTITHFSYPHATAL*FTMEKA Trigger: TGCTTTCTCCATTGTAAACCACAAGGCTGTTGCATG...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR TCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCATATTAGGGGGACAGTaGACATATAACTCAAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: YVITQVLSLVTITHFSYPILGGQ*TYNSSN Trigger: ATTGCTTGAGTTATATGTTCACTGTCCCCCTAATAT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR TCA 72 bp | AGCCAACAATGGCTAAAACATCCATGCAACACTTCGTaGAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SQQWLKHPCNTS*SPFCQRLPCVH Trigger: ATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACGAAGTGTTGCATGGATGTTTTAGCCATTGTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR TCA 72 bp | TCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTaGGCCTCAGCTTCAGGAAGAAGAACCTGCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLLQCNRQAHP*ASASGRRTCRN Trigger: ATTTCTGCAGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR GCA 72 bp | GGTTTACAATGGAGAAAGCAGACACCAGAAGGAACTTaGTCAAGATCATGCACCCAGATAGTGGGACAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GLQWRKQTPEGT*SRSCTQIVGQV Trigger: CACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTCTGCTTTCTCCATTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CAA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCGACACCAGAAGGAACTaGCTCAAGATCATGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: YVITQVLSLVTITHFSYPDTRRN*LKIMHP Trigger: TGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTC...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTGGGAAGGGCCCAAGTTaGATAAGGGAAAGCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTGKGPS*IRESQQ Trigger: TTGTTGGCTTTCCCTTATCAAACTTGGGCCCTTCCC...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTTACAGGAAAGGCTTCTaGGTAACCTTCTTTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTYRKGF*VTFFVS Trigger: TGAAACAAAGAAGGTTACCAAGAAGCCTTTCCTGTA...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTGATAGTGCTGTCCCCTaGGGTGGTCTTCCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPDSAVP*GGLPGV Trigger: CACCCCAGGAAGACCACCTCAGGGGACAGCACTATC...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTACCGGGTCCTGCAGAGTaGACCTGTATGTCCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLPGPAE*TCMSPS Trigger: ACTCGGGGACATACAGGTGCACTCTGCAGGACCCGG...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTGGCGAGCACCCAGACTaGACCGTCAGCCCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPGEHPD*TVSPAF Trigger: AAATGCTGGGCTGACGGTGCAGTCTGGGTGCTCGCC...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTATGCTGTCCCCTGAGGTaGTCTTCCTGGGGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLCCPLR*SSWGVS Trigger: GGAGACACCCCAGGAAGACCACCTCAGGGGACAGCA...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTACCATGCAACACTTCGTaGAGTCCCTTCTGCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLPCNTS*SPFCQR Trigger: CCGCTGGCAGAAGGGACTTCACGAAGTGTTGCATGG...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTCCGGGTCCTGCAGAGTaGACCTGTATGTCCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPPGPAE*TCMSPS Trigger: ACTCGGGGACATACAGGTGCACTCTGCAGGACCCGG...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTATGCCCATCCGGGTCCTaGAGAGTGCACCTGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLCPSGS*RVHLYV Trigger: GACATACAGGTGCACTCTGCAGGACCCGGATGGGCA...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTACCTGCCCACAGAAAATaGGGTGGGATCCCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLPAHRK*GGIPFQ Trigger: CTGGAAGGGGATCCCACCCCATTTTCTGTGGGCAGG...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTCCTGCCCACAGAAAATaGGGTGGGATCCCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPPAHRK*GGIPFQ Trigger: CTGGAAGGGGATCCCACCCCATTTTCTGTGGGCAGG...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTCTGAGGTGGTCTTCCTaGGGTGTCTCCATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPLRWSS*GVSILS Trigger: AGAGAGGATGGAGACACCCCAGGAAGACCACCTCAG...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTACTGTCACGGGCCAGCTaGGGGCATTCATATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: REVPSASGSRVSISWSVLLSRAS*GHSYFP Trigger: TGGGAAATATGAATGCCCCCAGCTGGCCCGTGACAG...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTCTGTCACGGGCCAGCTaGGGGCATTCATATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPLSRAS*GHSYFP Trigger: TGGGAAATATGAATGCCCCCAGCTGGCCCGTGACAG...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCAAACAGACCGTGGACCTaGCTTCCTCACTTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPNRPWT*LPHFPK Trigger: TTTGGGGAAGTGAGGAAGCCAGGTCCACGGTCTGTT...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGTGCCCATCCGGGTCCTaGAGAGTGCACCTGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERCPSGS*RVHLYV Trigger: GACATACAGGTGCACTCTGCAGGACCCGGATGGGCA...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCACCCTCCAATAACTTaGCCCAGGAGACCGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERHPPIT*PRRPCR Trigger: CCTACACGGTCTCCTGGGTCAAGTTATTGGAGGGTG...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTGAGGTGGTCTTCCTaGGGTGTCTCCATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERLRWSS*GVSILS Trigger: AGAGAGGATGGAGACACCCCAGGAAGACCACCTCAG...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCAAATAGGGCCTTTCATTaGGGGCGTCGAAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPNRAFH*GRRKNH Trigger: ATGGTTCTTTCGACGCCCCCAATGAAAGGCCCTATT...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCACAGATGAAAAGACCCTaGTGGGGAATAGTTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPQMKRP*WGIVHR Trigger: TCGATGAACTATTCCCCAGCAGGGTCTTTTCATCTG...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTAGTGTGTTAGGCTACTaGTTCAAGAACAGACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPSVLGY*FKNRPW Trigger: CCACGGTCTGTTCTTGAAGCAGTAGCCTAACACACT...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCATGGCCTCATGCTATGTaGTCATGTGATGGTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPWPHAM*SCDGFR Trigger: TCGAAAACCATCACATGACCACATAGCATGAGGCCA...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTCGTGTGTCCATATCTTaGAGTGTGTTAGGCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPRVSIS*SVLGYC Trigger: GCAGTAGCCTAACACACTCCAAGATATGGACACACG...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTAAATGTCCAGGAGGTTaGCCAGATAGCTGCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPKCPGG*PDSCIH Trigger: ATGTATGCAGCTATCTGGTCAACCTCCTGGACATTT...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTATGAAAAGACCCTGCTaGGGAATAGTTCATCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPMKRPC*GIVHRL Trigger: AAGTCGATGAACTATTCCCCAGCAGGGTCTTTTCAT...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGAACTTGCTCAAGATCATGCACCCAGATAGTGGGACAAGTGGGCGAGCACCCACCTTGTGGTTTACAATaGAGAAAGCAGACACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTCSRSCTQIVGQVGEHPPCGLQ*RKQTPE Trigger: TTCTGGTGTCTGCTTTCTCCATTGTAAACCACAAGG...TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGTAACAGACAGGCACACCCCTGAGCCTCAGCTTCAGGAAGAAGAACCTGGAAAACATGAGAAATaGATAGCACCCTCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVTDRHTPEPQLQEEEPGKHEK*IAPSHP Trigger: GGGATGAGAGGGTGCTATCCATTTCTCATGTTTTCC...AGGTTCTTCTTCCTGAAGCTGAGGCTCAGGGGTGTGCCTGTCTGTTACACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGACCAGTTCTGTCTTGTaGGGAGTCACTAGCCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERTSSVL*GVTSPK Trigger: TTTAGGGCTAGTGACTCCTCACAAGACAGAACTGGT...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGGGTTCATTGTACAGATTATGTAATCACCCAGGTATTAAGCCTAGTAACCATTCTCAGGAGCAGAAGCTaGAGGCCGCGCGACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVHCTDYVITQVLSLVTILRSRS*RPRDMA Trigger: AGCCATGTCGCGCGGCCTCCAGCTTCTGCTCCTGAG...AATGGTTACTAGGCTTAATACCTGGGTGATTACATAATCTGTACAATGAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379153.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTGATAGTGCTGTCCCCTaGGGTGGTCTTCCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVDSAVP*GGLPGV Trigger: CACCCCAGGAAGACCACCTCAGGGGACAGCACTATC...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGAAATGTCCAGGAGGTTaGCCAGATAGCTGCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERKCPGG*PDSCIH Trigger: ATGTATGCAGCTATCTGGTCAACCTCCTGGACATTT...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTATATTAGGGGGACAGTaGACATATAACTCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLILLSSSVTDRHTPEPILGGQ*TYNSSN Trigger: ATTGCTTGAGTTATATGTTCACTGTCCCCCTAATAT...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCTGCTGTCCCCTGAGGTaGTCTTCCTGGGGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVITQVLSLVTITHFSYPCCPLR*SSWGVS Trigger: GGAGACACCCCAGGAAGACCACCTCAGGGGACAGCA...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GACCTGGCTTCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCCTTGTGGTTTACAATaGAGAAAGCAGACACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLASSLPQKNSYRRLQERPCGLQ*RKQTPE Trigger: TTCTGGTGTCTGCTTTCTCCATTGTAAACCACAAGG...CCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTCACCCTCCAATAACTTaGCCCAGGAGACCGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVHPPIT*PRRPCR Trigger: CCTACACGGTCTCCTGGGTCAAGTTATTGGAGGGTG...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTCAGATGAAAAGACCCTaGTGGGGAATAGTTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQKNSYRRLQERLLGQMKRP*WGIVHR Trigger: TCGATGAACTATTCCCCAGCAGGGTCTTTTCATCTG...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTGGAAAACATGAGAAATaGATAGCACCCTCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQKNSYRRLQERLLGGKHEK*IAPSHP Trigger: GGGATGAGAGGGTGCTATCCATTTCTCATGTTTTCC...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTCATGCAACAGCCTTGTaGTTTACAATGGAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQKNSYRRLQERLLGHATAL*FTMEKA Trigger: TGCTTTCTCCATTGTAAACCACAAGGCTGTTGCATG...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTCCAGGCTGTAGGTGGTaGACCCAAGTCCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTPGCRW*TQVLTL Trigger: AAGAGTGAGGACTTGGGTTCACCACCTACAGCCTGG...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCACTTCCCCAAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTCCTGTCAGTTCACAATaGTATCTCACTACAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPQKNSYRRLQERLLGPVSSQ*YLTTDT Trigger: TGTATCTGTAGTGAGATAGCATTGTGAACTGACAGG...ACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTTGCTATGTGGTCATGTaGTGGTTTTCGAGGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTCYVVM*WFSRPA Trigger: GGCAGGCCTCGAAAACCATCACATGACCACATAGCA...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCAAGGACTTCACAGGATaGCATCTTCAGCGTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YVITQVLSLVTITHFSYPKDFTG*HLQRRL Trigger: GAGCCTACGCTGAAGATGGCATCCTGTGAAGTCCTT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTTCATTGTACAGATTATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACACCAGAAGGAACTTaGTCAAGATCATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVHCTDYVITQVLSLVTITPEGT*SRSCTQ Trigger: CTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGT...AATGGTTACTAGGCTTAATACCTGGGTGATTACATAATCTGTACAATGAACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTACACCAGAAGGAACTTaGTCAAGATCATGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVTPEGT*SRSCTQ Trigger: CTGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGT...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTACTTGCTCAAGATCATaGACCCAGATAGTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVTCSRS*TQIVGQ Trigger: TTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGT...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCAGTGTGTTAGGCTACTaGTTCAAGAACAGACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVITQVLSLVTITHFSYPSVLGY*FKNRPW Trigger: CCACGGTCTGTTCTTGAAGCAGTAGCCTAACACACT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCAATAGGGCCTTTCATTaGGGGCGTCGAAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YVITQVLSLVTITHFSYPNRAFH*GRRKNH Trigger: ATGGTTCTTTCGACGCCCCCAATGAAAGGCCCTATT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | GGGGTTCATTGTACAGATTATGTAATCACCCAGGTATTAAGCCTAGTAACCATTTGGCCTCATGCTATGTaGTCATGTGATGGTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVHCTDYVITQVLSLVTIWPHAM*SCDGFR Trigger: TCGAAAACCATCACATGACCACATAGCATGAGGCCA...AATGGTTACTAGGCTTAATACCTGGGTGATTACATAATCTGTACAATGAACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGAATTCCTACAGAAGGCTACAGGAAAGGCTTCTTGGTAACCTTCTTTGTTCATGCAACAGCCTTGTaGTTTACAATGGAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRIPTEGYRKGFLVTFFVHATAL*FTMEKA Trigger: TGCTTTCTCCATTGTAAACCACAAGGCTGTTGCATG...AACAAAGAAGGTTACCAAGAAGCCTTTCCTGTAGCCTTCTGTAGGAATTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTCGTGTGTCCATATCTTaGAGTGTGTTAGGCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTRVSIS*SVLGYC Trigger: GCAGTAGCCTAACACACTCCAAGATATGGACACACG...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGCCAAGACAGAGGTAAAAACACTAAATCAACTTGGTATCCGTTTTACTACTTGCTCAAGATCATaGACCCAGATAGTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: MKAKTEVKTLNQLGIRFTTCSRS*TQIVGQ Trigger: TTGTCCCACTATCTGGGTGCATGATCTTGAGCAAGT...AGTAAAACGGATACCAAGTTGATTTAGTGTTTTTACCTCTGTCTTGGCTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CCA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCATGAAAAGACCCTGCTaGGGAATAGTTCATCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YVITQVLSLVTITHFSYPMKRPC*GIVHRL Trigger: AAGTCGATGAACTATTCCCCAGCAGGGTCTTTTCAT...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CAA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTGACACCAGAAGGAACTaGCTCAAGATCATGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRLILLSSSVTDRHTPEPDTRRN*LKIMHP Trigger: TGGGTGCATGATCTTGAGCAAGTTCCTTCTGGTGTC...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CAA 90 bp | CGTGAAGTCCCTTCTGCCAGCGGCTCCCGTGTGTCCATATCTTGGAGTGTGTTACCGTGTGTCCATATCTaGGAGTGTGTTAGGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: REVPSASGSRVSISWSVLPCVHI*ECVRLL Trigger: CAGTAGCCTAACACACTCCAAGATATGGACACACGG...TAACACACTCCAAGATATGGACACACGGGAGCCGCTGGCAGAAGGGACTTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CAA 90 bp | CGTAGGCTCATTCTTCTCTCCTCCAGTGTAACAGACAGGCACACCCCTGAGCCTTACAGGAAAGGCTTCTaGGTAACCTTCTTTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRLILLSSSVTDRHTPEPYRKGF*VTFFVS Trigger: TGAAACAAAGAAGGTTACCAAGAAGCCTTTCCTGTA...AGGCTCAGGGGTGTGCCTGTCTGTTACACTGGAGGAGAGAAGAATGAGCCTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CAA 90 bp | GGGGTTCATTGTACAGATTATGTAATCACCCAGGTATTAAGCCTAGTAACCATTGGGAAGGGCCCAAGTTaGATAAGGGAAAGCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GVHCTDYVITQVLSLVTIGKGPS*IRESQQ Trigger: TTGTTGGCTTTCCCTTATCAAACTTGGGCCCTTCCC...AATGGTTACTAGGCTTAATACCTGGGTGATTACATAATCTGTACAATGAACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||
| CDS-3UTR CAA 90 bp | TATGTAATCACCCAGGTATTAAGCCTAGTAACCATTACTCATTTTTCCTATCCCTACAGGAAAGGCTTCTaGGTAACCTTCTTTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YVITQVLSLVTITHFSYPYRKGF*VTFFVS Trigger: TGAAACAAAGAAGGTTACCAAGAAGCCTTTCCTGTA...GGGATAGGAAAAATGAGTAATGGTTACTAGGCTTAATACCTGGGTGATTACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379153.4 ENST00000612003.4 |
||