Pregenerated sensors for CD69 (Homo sapiens)
Ensembl gene IDs: ENSG00000110848Ensembl transcript IDs: ENST00000228434.7, ENST00000416624.6, ENST00000536709.1, ENST00000543147.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TACCAACATCTAACTCCTTCCAATAGTGCAAATGCATaGAGGGCTCTCACTGTTGGTAGTCATTCAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: YQHLTPSNSANA*RALTVGSHSAI Trigger: TATTGCTGAATGACTACCAACAGTGAGAGCCCTTCATGCATTTGCACTATTGGAAGGAGTTAGATGTTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATAAGTGCATCCAAAGGTaGCATAGTCATTCTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALTVGSHSAINSKSTPSYKCIQR*HSHSSH Trigger: ATGAGAAGAATGACTATGCAACCTTTGGATGCACTT...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTGGAAGGACCCTTCATaGCGTGTTGAGAAATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHWKDPS*RVEKWG Trigger: TCCCCATTTCTCAACACGTCATGAAGGGTCCTTCCA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATACAAGCATTTTGGGCTaGAGTCCAGCTCCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHTSILG*SPAPLH Trigger: GTGAAGAGGAGCTGGACTTCAGCCCAAAATGCTTGT...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTGTCCACTCTCCGGATaGAAAGAGCTGTTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHCPLSG*KELFSA Trigger: AGCAGAGAACAGCTCTTTGCATCCGGAGAGTGGACA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATCAAGTCAAGCTACAGTaGAAGTCTTTGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHQVKLQ*KSLLEL Trigger: GAGCTCCAGCAAAGACTTTCACTGTAGCTTGACTTG...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATCCCTTCATGACGTGTTaGGAAATGGGGACTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYPFMTC*EMGTGG Trigger: GCCACCAGTCCCCATTTCTCAACACGTCATGAAGGG...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATAAATTCTTTGCCATTTaGCCACTTCCATGGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHKFFAI*PLPWVT Trigger: GGTCACCCATGGAAGTGGTCAAATGGCAAAGAATTT...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTTCACAAAGTCTCTATaGAAGACTTCGGACCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHFTKSL*KTSDHR Trigger: TCTGTGGTCCGAAGTCTTCCATAGAGACTTTGTGAA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCCCCTTCATGACGTGTTaGGAAATGGGGACTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELPFMTC*EMGTGG Trigger: GCCACCAGTCCCCATTTCTCAACACGTCATGAAGGG...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR TCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATGACCACTTCCATGGGTaGCCAGGTTCCTTTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYDHFHG*PGSFFS Trigger: ACTGAAAAAGGAACCTGGTCACCCATGGAAGTGGTC...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATAGTGCATCCAAAGGTTaGATAGTCATTCTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHSASKG*IVILLI Trigger: AATGAGAAGAATGACTATGCAACCTTTGGATGCACT...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATATTGAGAATGTGTATTaGCCTGGACAATTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHIENVY*PGQLYW Trigger: CCAATACAATTGTCCAGGCCAATACACATTCTCAAT...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATTCAGAACAAGCATTTTaGGCTGAAGTCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYSEQAF*AEVQLL Trigger: GAGGAGCTGGACTTCAGCCCAAAATGCTTGTTCTGA...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCACAAGCATTTTGGGCTaGAGTCCAGCTCCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELTSILG*SPAPLH Trigger: GTGAAGAGGAGCTGGACTTCAGCCCAAAATGCTTGT...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR TCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATAATAGTGCAAATGCATaGAGGGCTCTCACTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYNSANA*RALTVG Trigger: ACCAACAGTGAGAGCCCTTCATGCATTTGCACTATT...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTGTCCACTCTCCGGATaGAAAGAGCTGTTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELCPLSG*KELFSA Trigger: AGCAGAGAACAGCTCTTTGCATCCGGAGAGTGGACA...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTGCCACATCACATATTaGACATTTTCCAACACTATT | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHCHITY*TFSNTI Trigger: AATAGTGTTGGAAAATGTGCAATATGTGATGTGGCA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTTCCTAATAGAGATTTaGCACATCACATATTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTSDHRAASTDTDFLEFHFLIEI*HITYCT Trigger: TGTGCAATATGTGATGTGGCAAATCTCTATTAGGAA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATAGAAATGGGGACTGGTaGCATCATTTTCTTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYRNGDW*HHFLVH Trigger: GTGGACAAGAAAATGATGCCACCAGTCCCCATTTCT...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATCCTGGACAATTGTATTaGCCCACTGATAAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYPGQLY*PTDKAM Trigger: CATTGCCTTATCAGTGGGCCAATACAATTGTCCAGG...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATGAATGTGTATTGGCCTaGACAATTGTATTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYECVLA*TIVLAH Trigger: GTGGGCCAATACAATTGTCCAGGCCAATACACATTC...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATCTTGGGCATGGTTATTaGTCAACCTGTGATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYLGHGY*STCDAS Trigger: AGAAGCATCACAGGTTGACCAATAACCATGCCCAAG...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCCAAGTCAAGCTACAGTaGAAGTCTTTGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELQVKLQ*KSLLEL Trigger: GAGCTCCAGCAAAGACTTTCACTGTAGCTTGACTTG...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR TCA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGGACCACTTCCATGGGTaGCCAGGTTCCTTTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKEFQSIRIQKRLLELLDHFHG*PGSFFS Trigger: ACTGAAAAAGGAACCTGGTCACCCATGGAAGTGGTC...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATTTGAGAAATGGGGACTaGTGGCATCATTTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYLRNGD*WHHFLV Trigger: GACAAGAAAATGATGCCACCAGTCCCCATTTCTCAA...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCAAATTCTTTGCCATTTaGCCACTTCCATGGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELKFFAI*PLPWVT Trigger: GGTCACCCATGGAAGTGGTCAAATGGCAAAGAATTT...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCAGAAATGGGGACTGGTaGCATCATTTTCTTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELRNGDW*HHFLVH Trigger: GTGGACAAGAAAATGATGCCACCAGTCCCCATTTCT...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCGAATGTGTATTGGCCTaGACAATTGTATTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELECVLA*TIVLAH Trigger: GTGGGCCAATACAATTGTCCAGGCCAATACACATTC...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGTCAGAACAAGCATTTTaGGCTGAAGTCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIKEFQSIRIQKRLLELLSEQAF*AEVQLL Trigger: GAGGAGCTGGACTTCAGCCCAAAATGCTTGTTCTGA...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR GCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATCAAAGAGCTGTTCTCTaGTACGAAACAATTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYQRAVL*YETIFR Trigger: TCTGAAAATTGTTTCGTAGCAGAGAACAGCTCTTTG...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATAATAAAAGCCCACAGTaGAGATTTTCCTGGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYNKSPQ*RFSWNF Trigger: GAAATTCCAGGAAAATCTGCACTGTGGGCTTTTATT...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGAGAAATGGGGACTaGTGGCATCATTTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVIKEFQSIRIQKRLLELLRNGD*WHHFLV Trigger: GACAAGAAAATGATGCCACCAGTCCCCATTTCTCAA...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATTTCCATAGTTCTGTTTaGAAGAAAATTCCCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTVGSHSAINSKSTPSYFHSSV*KKIPKT Trigger: TGTCTTGGGAATTTTCTTCCAAACAGAACTATGGAA...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR GCA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGCAAAGAGCTGTTCTCTaGTACGAAACAATTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VIKEFQSIRIQKRLLELLQRAVL*YETIFR Trigger: TCTGAAAATTGTTTCGTAGCAGAGAACAGCTCTTTG...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CCA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGATTGAGAATGTGTATTaGCCTGGACAATTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIKEFQSIRIQKRLLELLIENVY*PGQLYW Trigger: CCAATACAATTGTCCAGGCCAATACACATTCTCAAT...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| 3UTR CAA 72 bp | TTCTGGATTCAAAATAATATAAAGTGCATCCAAAGGTaGCATAGTCATTCTTCTCATTCTTGGGCATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FWIQNNIKCIQR*HSHSSHSWAWL Trigger: TAACCATGCCCAAGAATGAGAAGAATGACTATGCAACCTTTGGATGCACTTTATATTATTTTGAATCCAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| 3UTR CAA 72 bp | ATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATaGTTAGAGCTCTTGAAGAGCTCAGCCTTTATATTT | + |
|
Preference number: 4 (lower is better) Translates to: IKEFQSIRIQKR*LELLKSSAFIF Trigger: AAATATAAAGGCTGAGCTCTTCAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS TCA 90 bp | TACAGCACACAGGACAGGAACTTGGAAGGACCCTTCATGACGTGTTaGGAAATGGGGACTGGTGGCATCATTTTCTTGTCCACTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YSTQDRNLEGPFMTC*EMGTGGIIFLSTLR Trigger: CCGGAGAGTGGACAAGAAAATGATGCCACCAGTCCCCATTTCTCAACACGTCATGAAGGGTCCTTCCAAGTTCCTGTCCTGTGTGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 ENST00000543147.1 |
||
| CDS-3UTR CAA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATGGTGGCATCATTTTCTaGTCCACTCTCCGGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KTSDHRAASTDTDFLEFHGGIIF*STLRMQ Trigger: TTGCATCCGGAGAGTGGACAAGAAAATGATGCCACC...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS TCA 90 bp | ACATTCATTACAGCACACAGGACAGGAACTTGGAAGGACCCTTCATaGCGTGTTGAGAAATGGGGACTGGTGGCATCATTTTCTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TFITAHRTGTWKDPS*RVEKWGLVASFSCP Trigger: TGGACAAGAAAATGATGCCACCAGTCCCCATTTCTCAACACGTCATGAAGGGTCCTTCCAAGTTCCTGTCCTGTGTGCTGTAATGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 ENST00000543147.1 |
||
| CDS-3UTR CAA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTATTGGCCTGGACAATaGTATTGGCCCACTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTSDHRAASTDTDFLEFHYWPGQ*YWPTDK Trigger: CTTATCAGTGGGCCAATACAATTGTCCAGGCCAATA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS CCA 90 bp | GAGCATGAAGAAACATGGCTGTCTGATGGCATTGAGAATGTGTATTaGCCTGGACAATTGTATTGGCCCACTGATAAGGCAATGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHEETWLSDGIENVY*PGQLYWPTDKAMRA Trigger: AGCTCTCATTGCCTTATCAGTGGGCCAATACAATTGTCCAGGCCAATACACATTCTCAATGCCATCAGACAGCCATGTTTCTTCATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 |
||
| CDS TCA 90 bp | TTGAACCAGTTGTTAAATTCTTTGCCATTTGACCACTTCCATGGGTaGCCAGGTTCCTTTTTCAGTCCAACCCAGTGTTCCTCTCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LNQLLNSLPFDHFHG*PGSFFSPTQCSSLP Trigger: AGGTAGAGAGGAACACTGGGTTGGACTGAAAAAGGAACCTGGTCACCCATGGAAGTGGTCAAATGGCAAAGAATTTAACAACTGGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS TCA 90 bp | ACTTACCAGTTGTTAAATTCTTTGCCATTTGACCACTTCCATGGGTaGCCAGGTTCCTTTTTCAGTCCAACCCAGTGTTCCTCTCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: TYQLLNSLPFDHFHG*PGSFFSPTQCSSLP Trigger: AGGTAGAGAGGAACACTGGGTTGGACTGAAAAAGGAACCTGGTCACCCATGGAAGTGGTCAAATGGCAAAGAATTTAACAACTGGTAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000416624.6 ENST00000536709.1 |
||
| CDS-3UTR CAA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATGGCTGTCTGATGGCATaGAGAATGTGTATTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALTVGSHSAINSKSTPSYGCLMA*RMCIGL Trigger: CAGGCCAATACACATTCTCAATGCCATCAGACAGCC...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CAA 90 bp | AAGACTTCGGACCACAGAGCAGCATCCACTGACACAGATTTCCTTGAGTTCCATTCAGACCCTGTAACGTaGAACCAGTTGTTAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTSDHRAASTDTDFLEFHSDPVT*NQLLNS Trigger: AGAATTTAACAACTGGTTCAACGTTACAGGGTCTGA...ATGGAACTCAAGGAAATCTGTGTCAGTGGATGCTGCTCTGTGGTCCGAAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS-3UTR CAA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGGGTGGCATCATTTTCTaGTCCACTCTCCGGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VIKEFQSIRIQKRLLELLGGIIF*STLRMQ Trigger: TTGCATCCGGAGAGTGGACAAGAAAATGATGCCACC...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CAA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATTTCAGAAAAACACACTaGTCAGACCCTGTAACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALTVGSHSAINSKSTPSYFRKTH*SDPVTL Trigger: CAACGTTACAGGGTCTGACAAGTGTGTTTTTCTGAA...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS TCA 90 bp | TCTGGGGAAGTAGATAGTAAATCCTGTTTCTCAAAAGCTGCAACTTaGGGCATGACAGCTTATCTGACCATGTACTCATTCTATATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGEVDSKSCFSKAAT*GMTAYLTMYSFYIG Trigger: TCCTATATAGAATGAGTACATGGTCAGATAAGCTGTCATGCCTCAAGTTGCAGCTTTTGAGAAACAGGATTTACTATCTACTTCCCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416624.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTATTGGCCTGGACAATaGTATTGGCCCACTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVIKEFQSIRIQKRLLELYWPGQ*YWPTDK Trigger: CTTATCAGTGGGCCAATACAATTGTCCAGGCCAATA...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CAA 90 bp | CCTGTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCCGCATTCAGAAGAGATaGTTAGAGCTCTTGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PVIKEFQSIRIQKRLLELRIQKR*LELLKS Trigger: GCTCTTCAAGAGCTCTAACAATCTCTTCTGAATGCG...GAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CAA 90 bp | GCTCTCACTGTTGGTAGTCATTCAGCAATAAATAGTAAGTCCACGCCTAGTTATTTTCCTAATAGAGATTaGCCACATCACATATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALTVGSHSAINSKSTPSYFPNRD*PHHILH Trigger: GTGCAATATGTGATGTGGCAAATCTCTATTAGGAAA...ATAACTAGGCGTGGACTTACTATTTATTGCTGAATGACTACCAACAGTGAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228434.7 |
||
| CDS TCA 90 bp | CTCAGGCTGATCATATGGTTCTCTGGGATGACATTTTCCTACATCTaGAATAGGTACAATGTTTGTTTGTTTGTTTGTTTTCTCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRLIIWFSGMTFSYI*NRYNVCLFVCFLHL Trigger: TAAGTGGAGAAAACAAACAAACAAACAAACATTGTACCTATTTCAGATGTAGGAAAATGTCATCCCAGAGAACCATATGATCAGCCTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416624.6 |
||
| CDS-3UTR CAA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGAGATTGTTAGAGCTCTaGAAGAGCTCAGCCTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: VIKEFQSIRIQKRLLELLRLLEL*KSSAFI Trigger: TATAAAGGCTGAGCTCTTCAAGAGCTCTAACAATCT...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS-3UTR CAA 90 bp | GTTATTAAAGAATTCCAGAGTATACGCATTCAGAAGAGATTGTTAGAGCTCTTGCTGGAGACTTACCAGTaGTTAAATTCTTTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VIKEFQSIRIQKRLLELLLETYQ*LNSLPF Trigger: AAATGGCAAAGAATTTAACAACTGGTAAGTCTCCAG...CAAGAGCTCTAACAATCTCTTCTGAATGCGTATACTCTGGAATTCTTTAATAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS TCA 72 bp | CAGGACAGGAACTTGGAAGGACCCTTCATGACGTGTTaGGAAATGGGGACTGGTGGCATCATTTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QDRNLEGPFMTC*EMGTGGIIFLS Trigger: GGACAAGAAAATGATGCCACCAGTCCCCATTTCTCAACACGTCATGAAGGGTCCTTCCAAGTTCCTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 ENST00000543147.1 |
||
| CDS GCA 72 bp | GGACTGGTGGCATCATTTTCTTGTCCACTCTCCGGATaGAAAGAGCTGTTCTCTGCTACGAAACAATTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLVASFSCPLSG*KELFSATKQFS Trigger: TGAAAATTGTTTCGTAGCAGAGAACAGCTCTTTGCATCCGGAGAGTGGACAAGAAAATGATGCCACCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 ENST00000543147.1 |
||
| CDS CCA 72 bp | GAAACATGGCTGTCTGATGGCATTGAGAATGTGTATTaGCCTGGACAATTGTATTGGCCCACTGATAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ETWLSDGIENVY*PGQLYWPTDKA Trigger: TGCCTTATCAGTGGGCCAATACAATTGTCCAGGCCAATACACATTCTCAATGCCATCAGACAGCCATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 |
||
| CDS TCA 72 bp | TTGTTAAATTCTTTGCCATTTGACCACTTCCATGGGTaGCCAGGTTCCTTTTTCAGTCCAACCCAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLNSLPFDHFHG*PGSFFSPTQCS Trigger: GGAACACTGGGTTGGACTGAAAAAGGAACCTGGTCACCCATGGAAGTGGTCAAATGGCAAAGAATTTAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 |
||
| CDS GCA 72 bp | TTCTTGTCCACTCTCCGGATGCAAAGAGCTGTTCTCTaGTACGAAACAATTTTCAGAGCTCATCTTTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLSTLRMQRAVL*YETIFRAHLYS Trigger: AGAATAAAGATGAGCTCTGAAAATTGTTTCGTAGCAGAGAACAGCTCTTTGCATCCGGAGAGTGGACAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000228434.7 ENST00000416624.6 ENST00000536709.1 ENST00000543147.1 |
||
| CDS CAA 72 bp | CTGGGGAATATAAAGAGACTTCTGGAGACTTACCAGTaGTTAAATTCTTTGCCATTTGACCACTTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGNIKRLLETYQ*LNSLPFDHFHG Trigger: CCCATGGAAGTGGTCAAATGGCAAAGAATTTAACAACTGGTAAGTCTCCAGAAGTCTCTTTATATTCCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536709.1 |
||
| CDS TCA 72 bp | GTAGATAGTAAATCCTGTTTCTCAAAAGCTGCAACTTaGGGCATGACAGCTTATCTGACCATGTACTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: VDSKSCFSKAAT*GMTAYLTMYSF Trigger: GAATGAGTACATGGTCAGATAAGCTGTCATGCCTCAAGTTGCAGCTTTTGAGAAACAGGATTTACTATCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416624.6 |
||