Pregenerated sensors for CD58 (Homo sapiens)
Ensembl gene IDs: ENSG00000116815Ensembl transcript IDs: ENST00000369487.3, ENST00000369489.10, ENST00000457047.6, ENST00000464088.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACTCCTCCTGCAAGGCTCATTGAGAGGGTTCCAGGAAACGATATaGAGAGAGTGGCTAGTGCAGTGCATGGCACACAGTTGGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: ILLLQGSLRGFQETI*REWLVQCMAHSWYL Trigger: TAAGTACCAACTGTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCTCAATGAGCCTTGCAGGAGGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR CCA 90 bp | CTGCAAGGCTCATTGAGAGGGTTCCAGGAAACGATATGCAGAGAGTaGCTAGTGCAGTGCATGGCACACAGTTGGTACTTAATACACTAT | + |
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Preference number: 1 (lower is better) Translates to: LQGSLRGFQETICRE*LVQCMAHSWYLIHY Trigger: ATAGTGTATTAAGTACCAACTGTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCTCAATGAGCCTTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTATAACTCTTGGAGTCCAAAGACCTAGATTTAAATCCCAGCCCATCACTGGGCTGCTGTTGTTCTaGCACAGAGTGCACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NSITLGVQRPRFKSQPITGLLLF*HRVHSL Trigger: CAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCC...AGTGATGGGCTGGGATTTAAATCTAGGTCTTTGGACTCCAAGAGTTATACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR-3UTR TCA 90 bp | AACGTGACTTTGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCTTCCTGCAAGGCTCATTaGGAGGGTTCCAGGAAACGA | + |
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Preference number: 2 (lower is better) Translates to: NVTLISHLTSMNLICAVSSCKAH*EGSRKR Trigger: TCGTTTCCTGGAACCCTCTCAATGAGCCTTGCAGGA...AGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAAAGTCACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTATAACTCTTGGAGTCCAAAGACCTAGATTTAAATCCCAGCCCATCACTACGATATGCAGAGAGTaGCTAGTGCAGTGCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: NSITLGVQRPRFKSQPITTICRE*LVQCMA Trigger: TGCCATGCACTGCACTAGCCACTCTCTGCATATCGT...AGTGATGGGCTGGGATTTAAATCTAGGTCTTTGGACTCCAAGAGTTATACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTAGTATATCTGCTGATGTTACTTCTTATTACTGTACAAGGCAACCAACACATCTACAGCAGGGCTaGTGTTGTTCTGGCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: MVSISADVTSYYCTRQPTHLQQG*CCSGTE Trigger: CTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATG...TGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAGCAGATATACTAACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR CAA 90 bp | GACCTAGATTTAAATCCCAGCCCATCACTTACTAGCAACGTGACTTaGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DLDLNPSPSLTSNVT*ISHLTSMNLICAVS Trigger: AGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAAAGTCACGTTGCTAGTAAGTGATGGGCTGGGATTTAAATCTAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR GCA 72 bp | CTGCAAGGCTCATTGAGAGGGTTCCAGGAAACGATATaGAGAGAGTGGCTAGTGCAGTGCATGGCACACAGT | + |
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Preference number: 3 (lower is better) Translates to: LQGSLRGFQETI*REWLVQCMAHS Trigger: ACTGTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCTCAATGAGCCTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTCTCCTGCAAGGCTCATaGAGAGGGTTCCAGGAAACG | + |
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Preference number: 3 (lower is better) Translates to: FVSYLLYVTTGPALTLAPLLQGS*RGFQET Trigger: CGTTTCCTGGAACCCTCTCAATGAGCCTTGCAGGAG...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR CCA 72 bp | TCATTGAGAGGGTTCCAGGAAACGATATGCAGAGAGTaGCTAGTGCAGTGCATGGCACACAGTTGGTACTTA | + |
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Preference number: 3 (lower is better) Translates to: SLRGFQETICRE*LVQCMAHSWYL Trigger: TAAGTACCAACTGTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCTCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| 3UTR CCA 72 bp | GCAGTGCATGGCACACAGTTGGTACTTAATACACTATaGTTAGTATATCTGCTGATGTTACTTCTTATTACT | + |
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Preference number: 3 (lower is better) Translates to: AVHGTQLVLNTL*LVYLLMLLLIT Trigger: AGTAATAAGAAGTAACATCAGCAGATATACTAACCATAGTGTATTAAGTACCAACTGTGTGCCATGCACTGC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTCGGCCTCTGCGCGAGTaGCCAGCCACAAGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FVSYLLYVTTGPALTLAPRPLRE*PATSSP Trigger: AGGGCTGCTTGTGGCTGGGCACTCGCGCAGAGGCCG...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | CTGGCTTCCCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGGGGCTGCTGTTGTTCTaGCACAGAGTGCACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LASQVMGIYSRAAVVLAQGLLLF*HRVHSL Trigger: CAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCC...CTGTGCCAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGGGAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | CTGGCTTCCCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGATGAAACCAAAGCAGTaGAGCAGGCAGACCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: LASQVMGIYSRAAVVLAQMKPKQ*SRQTTL Trigger: CAGCGTGGTCTGCCTGCTGCACTGCTTTGGTTTCAT...CTGTGCCAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGGGAAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | CTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCGTCGGGCCGGCCTCTaGGCGAGTGCCCAGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: LMLLLITVQGNQQMSTIWRRAGL*ASAQPQ Trigger: TTGTGGCTGGGCACTCGCGCAGAGGCCGGCCCGACG...CCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR TCA 90 bp | TACAATCTGGCTTCCCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGTCCTGCAAGGCTCATTaGGAGGGTTCCAGGAAACGA | + |
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Preference number: 4 (lower is better) Translates to: YNLASQVMGIYSRAAVVLSCKAH*EGSRKR Trigger: TCGTTTCCTGGAACCCTCTCAATGAGCCTTGCAGGA...CAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGGGAAGCCAGATTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTCCCTGGCTCCTGAAGTaGACCCTATCCCTGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: FVSYLLYVTTGPALTLAPPWLLK*TLSLIQ Trigger: TTGGATCAGGGATAGGGTTCACTTCAGGAGCCAGGG...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | CTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCGCTCCCAGCAACCATaGCTCGTCGGGCCGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LMLLLITVQGNQQMSTIWRSQQP*LVGPAS Trigger: AGAGGCCGGCCCGACGAGCCATGGTTGCTGGGAGCG...CCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR TCA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACAGTGAACCCTATCCCTaGTCCAACTTTTTCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RGFQETICREWLVQCMAHSEPYP*SNFFWD Trigger: ATCCCAGAAAAAGTTGGATCAGGGATAGGGTTCACT...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | TACAATCTGGCTTCCCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGTTCTGGGATGGGAGGTaGAGGGAGTGTATTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: YNLASQVMGIYSRAAVVLFWDGR*RECIVV Trigger: CACTACAATACACTCCCTCCACCTCCCATCCCAGAA...CAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGGGAAGCCAGATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | TACAATCTGGCTTCCCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGTCTTGAATGACCGCTaGTTGGGATACAGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: YNLASQVMGIYSRAAVVLVLNDR*LGYRLS Trigger: TGACAACCTGTATCCCAAGCAGCGGTCATTCAAGAC...CAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGGGAAGCCAGATTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACATGCACAAGTTAGTGTaGGAGATGGAAGAGACTCAA | + |
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Preference number: 4 (lower is better) Translates to: RGFQETICREWLVQCMAHMHKLV*EMEETQ Trigger: TTGAGTCTCTTCCATCTCCCACACTAACTTGTGCAT...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTACGATATGCAGAGAGTaGCTAGTGCAGTGCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVSYLLYVTTGPALTLAPTICRE*LVQCMA Trigger: TGCCATGCACTGCACTAGCCACTCTCTGCATATCGT...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACTGCATGGCACACAGTTaGTACTTAATACACTATGGT | + |
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Preference number: 4 (lower is better) Translates to: RGFQETICREWLVQCMAHCMAHS*YLIHYG Trigger: ACCATAGTGTATTAAGTACCAACTGTGTGCCATGCA...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTCATAGGACAATCCCATaGGTACATTATAAGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FVSYLLYVTTGPALTLAPHRTIP*VHYKSS Trigger: CGAGGACTTATAATGTACTCATGGGATTGTCCTATG...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | TTGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCTAAGCAAGGGCATCTACAGCAGGGCTaGTGTTGTTCTGGCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: LISHLTSMNLICAVSKQGHLQQG*CCSGTE Trigger: CTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATG...CCCTTGCTTAGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR TCA 90 bp | AATCCCAGCCCATCACTTACTAGCAACGTGACTTTGATATCTCACTTGACTTCTTGCATATCTGTGTCTTaGATGACCGCTGCTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NPSPSLTSNVTLISHLTSCISVS*MTAAWD Trigger: ATCCCAAGCAGCGGTCATTCAAGACACAGATATGCA...AGAAGTCAAGTGAGATATCAAAGTCACGTTGCTAGTAAGTGATGGGCTGGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | CTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCTTCCCAAGACAGAGTGCACAGCCTaGAGTGTACTTACTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLITVQGNQQMSTIWLPKTECTA*SVLTWF Trigger: GAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGT...CTTGGGAAGCCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | AACAGTATAACTCTTGGAGTCCAAAGACCTAGATTTAAATCCCAGCCCATCACTGCTGTTGTAATGCTCTaGTATCATGCATTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: NSITLGVQRPRFKSQPITAVVML*YHALDF Trigger: GAAGTCCAATGCATGATACCAGAGCATTACAACAGC...AGTGATGGGCTGGGATTTAAATCTAGGTCTTTGGACTCCAAGAGTTATACTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | ATGGTTAGTATATCTGCTGATGTTACTTCTTATTACTGTACAAGGCAACCAACACAACTTTTTCTGGGATaGGAGGTGGAGGGAGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: MVSISADVTSYYCTRQPTQLFLG*EVEGVY Trigger: ATACACTCCCTCCACCTCCCATCCCAGAAAAAGTTG...TGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAGCAGATATACTAACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | AACGTGACTTTGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCTGAGTTACGTTTACATTaGTCCATAGGACAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NVTLISHLTSMNLICAVSELRLH*SIGQSH Trigger: ATGGGATTGTCCTATGGAGCAATGTAAACGTAACTC...AGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAAAGTCACGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | AACGTGACTTTGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCTTGCAGTGTACTTACTTaGTTCTGTCTGGTTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NVTLISHLTSMNLICAVSCSVLT*FCLVFC Trigger: ACAGAAAACCAGACAGAACCAAGTAAGTACACTGCA...AGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAAAGTCACGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | CTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGACATTGCTTGGTACATaGAAAGTTACATTCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: LMLLLITVQGNQQMSTIWTLLGT*KVTFPY Trigger: GTATGGGAATGTAACTTTCCATGTACCAAGCAATGT...CCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | TTGATATCTCACTTGACTTCTATGAATCTCATATGCGCTGTCTCTAAGCAAGGGGGTATCAGTAATATTTaGCGATTCCATTTCATACTC | + |
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Preference number: 4 (lower is better) Translates to: LISHLTSMNLICAVSKQGGISNI*RFHFIL Trigger: GAGTATGAAATGGAATCGCCAAATATTACTGATACC...CCCTTGCTTAGAGACAGCGCATATGAGATTCATAGAAGTCAAGTGAGATATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | CTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCTTTTAAAGGCACATTaGTTGGTACATGGAAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: LMLLLITVQGNQQMSTIWLLKAH*LVHGKL Trigger: TAACTTTCCATGTACCAAGCAATGTGCCTTTAAAAG...CCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR GCA 90 bp | ATGGTTAGTATATCTGCTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAAATGCTCTGGTATCATaGATTGGACTTCAATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: MVSISADVTSYYCTRQPTNALVS*IGLQCF Trigger: GAAGCATTGAAGTCCAATGCATGATACCAGAGCATT...TGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAGCAGATATACTAACCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CCA 90 bp | ATGGTTAGTATATCTGCTGATGTTACTTCTTATTACTGTACAAGGCAACCAACATCTGGTATCATGCATTaGACTTCAATGCTTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: MVSISADVTSYYCTRQPTSGIMH*TSMLPL Trigger: TAATGGAAGCATTGAAGTCCAATGCATGATACCAGA...TGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAGCAGATATACTAACCAT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS GCA 90 bp | CGCCCCGCGTCGCTCCCAGCAACCATGGCTCGTCGGGCCGGCCTCTaGGCGAGTGCCCAGCCACAAGCAGCCCTAAGTTCAAGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: RPASLPATMARRAGL*ASAQPQAALSSSTA Trigger: GGCGGTGCTTGAACTTAGGGCTGCTTGTGGCTGGGCACTCGCGCAGAGGCCGGCCCGACGAGCCATGGTTGCTGGGAGCGACGCGGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369487.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACGTGCATATCTGTGTCTaGAATGACCGCTGCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RGFQETICREWLVQCMAHVHICV*NDRCLG Trigger: TCCCAAGCAGCGGTCATTCAAGACACAGATATGCAC...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS GCA 90 bp | AGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGAGTaGACAGCCTGCAGTGTACTTACTTGGTTCTGTCTGGTTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SNGHLQQGCCCSGTE*TACSVLTWFCLVFC Trigger: ACAGAAAACCAGACAGAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | CCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGAGTGCACATTGAATGACCGCTGCTaGGGATACAGGTTGTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: PSNGHLQQGCCCSGTECTLNDRC*GYRLSK Trigger: TTTTGACAACCTGTATCCCAAGCAGCGGTCATTCAA...TGTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACGTGCATGGCACACAGTaGGTACTTAATACACTATGG | + |
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Preference number: 5 (lower is better) Translates to: RGFQETICREWLVQCMAHVHGTQ*VLNTLW Trigger: CCATAGTGTATTAAGTACCAACTGTGTGCCATGCAC...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS GCA 90 bp | CATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGAGTGCACAGCCTaGAGTGTACTTACTTGGTTCTGTCTGGTTTTCTGTCACATTTCA | + |
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Preference number: 5 (lower is better) Translates to: HLQQGCCCSGTECTA*SVLTWFCLVFCHIS Trigger: TGAAATGTGACAGAAAACCAGACAGAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | CCAAGTAATGGGCATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGAGTGCACACTCTGGTATCATGCATaGGACTTCAATGCTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: PSNGHLQQGCCCSGTECTLWYHA*DFNASI Trigger: AATGGAAGCATTGAAGTCCAATGCATGATACCAGAG...TGTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATGCCCATTACTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | AACAGTATAACTCTTGGAGTCCAAAGACCTAGATTTAAATCCCAGCCCATCACTACAGCAGGGCTGCTGTaGTTCTGGCACAGAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: NSITLGVQRPRFKSQPITTAGLL*FWHRVH Trigger: GTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGT...AGTGATGGGCTGGGATTTAAATCTAGGTCTTTGGACTCCAAGAGTTATACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | CTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCTTCCCAAGCTCCTGCAAGGCTCATaGAGAGGGTTCCAGGAAACG | + |
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Preference number: 5 (lower is better) Translates to: LLITVQGNQQMSTIWLPKLLQGS*RGFQET Trigger: CGTTTCCTGGAACCCTCTCAATGAGCCTTGCAGGAG...CTTGGGAAGCCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | AGAGGGTTCCAGGAAACGATATGCAGAGAGTGGCTAGTGCAGTGCATGGCACACTCTTTTAAAGGCACATaGCTTGGTACATGGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: RGFQETICREWLVQCMAHSFKGT*LGTWKV Trigger: AACTTTCCATGTACCAAGCAATGTGCCTTTAAAAGA...GTGTGCCATGCACTGCACTAGCCACTCTCTGCATATCGTTTCCTGGAACCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | TTTGTGTCCTATCTTTTATATGTGACTACAGGCCCAGCTCTGACCCTGGCTCCTCTGCAGTGTACTTACTaGGTTCTGTCTGGTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: FVSYLLYVTTGPALTLAPLQCTY*VLSGFL Trigger: CAGAAAACCAGACAGAACCAAGTAAGTACACTGCAG...AGGAGCCAGGGTCAGAGCTGGGCCTGTAGTCACATATAAAAGATAGGACACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS CCA 90 bp | CTGGCACAGAGTGCACAGCCTGCAGTGTACTTACTTGGTTCTGTCTaGTTTTCTGTCACATTTCAGAATACCATTCATATACAGCACAAT | + |
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Preference number: 5 (lower is better) Translates to: LAQSAQPAVYLLGSV*FSVTFQNTIHIQHN Trigger: ATTGTGCTGTATATGAATGGTATTCTGAAATGTGACAGAAAACCAGACAGAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | CTGATGTTACTTCTTATTACTGTACAAGGCAACCAACAGATGAGTACAATCTGGCACAACACCATATATTaGTTGGGAAAAACAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LMLLLITVQGNQQMSTIWHNTIY*LGKTAD Trigger: ATCAGCTGTTTTTCCCAACAAATATATGGTGTTGTG...CCAGATTGTACTCATCTGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGTATATCTGCTGATGTTACTTCTTATTACTGTACAAGGCAACCAACATTAAAGGCACATTGCTaGGTACATGGAAAGTTACAT | + |
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Preference number: 5 (lower is better) Translates to: MVSISADVTSYYCTRQPTLKAHC*VHGKLH Trigger: ATGTAACTTTCCATGTACCAAGCAATGTGCCTTTAA...TGTTGGTTGCCTTGTACAGTAATAAGAAGTAACATCAGCAGATATACTAACCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS GCA 72 bp | AGCAACCATGGCTCGTCGGGCCGGCCTCTGCGCGAGTaGCCAGCCACAAGCAGCCCTAAGTTCAAGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: SNHGSSGRPLRE*PATSSPKFKHR Trigger: GCGGTGCTTGAACTTAGGGCTGCTTGTGGCTGGGCACTCGCGCAGAGGCCGGCCCGACGAGCCATGGTTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369487.3 |
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| CDS GCA 72 bp | TCGCTCCCAGCAACCATGGCTCGTCGGGCCGGCCTCTaGGCGAGTGCCCAGCCACAAGCAGCCCTAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLPATMARRAGL*ASAQPQAALSS Trigger: TGAACTTAGGGCTGCTTGTGGCTGGGCACTCGCGCAGAGGCCGGCCCGACGAGCCATGGTTGCTGGGAGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369487.3 |
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| CDS GCA 72 bp | CATCTACAGCAGGGCTGCTGTTGTTCTGGCACAGAGTaGACAGCCTGCAGTGTACTTACTTGGTTCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HLQQGCCCSGTE*TACSVLTWFCL Trigger: CAGACAGAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCCTGCTGTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS GCA 72 bp | CAGGGCTGCTGTTGTTCTGGCACAGAGTGCACAGCCTaGAGTGTACTTACTTGGTTCTGTCTGGTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QGCCCSGTECTA*SVLTWFCLVFC Trigger: ACAGAAAACCAGACAGAACCAAGTAAGTACACTGCAGGCTGTGCACTCTGTGCCAGAACAACAGCAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457047.6 |
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| CDS CAA 72 bp | TCCTCGATGGCTGTTGTAATGCTCTGGTATCATGCATaGGACTTCAATGCTTCCATTAGTCAATGCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSMAVVMLWYHA*DFNASISQCTS Trigger: ACTTGTGCATTGACTAATGGAAGCATTGAAGTCCAATGCATGATACCAGAGCATTACAACAGCCATCGAGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369487.3 ENST00000369489.10 ENST00000457047.6 ENST00000464088.5 |
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| CDS CCA 72 bp | GTACATTATAAGTCCTCGATGGCTGTTGTAATGCTCTaGTATCATGCATTGGACTTCAATGCTTCCATTAGT | + |
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Preference number: 6 (lower is better) Translates to: VHYKSSMAVVML*YHALDFNASIS Trigger: ACTAATGGAAGCATTGAAGTCCAATGCATGATACCAGAGCATTACAACAGCCATCGAGGACTTATAATGTAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369487.3 ENST00000369489.10 ENST00000457047.6 ENST00000464088.5 |
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| CDS CAA 72 bp | GAAAGTTACATTCCCATACACAACACCATATATTTGTaGGGAAAAACAGCTGATGAAACCAAAGCAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ESYIPIHNTIYL*GKTADETKAVQ Trigger: CTGCACTGCTTTGGTTTCATCAGCTGTTTTTCCCAACAAATATATGGTGTTGTGTATGGGAATGTAACTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000369487.3 ENST00000369489.10 ENST00000457047.6 ENST00000464088.5 |
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