Pregenerated sensors for CD53 (Homo sapiens)
Ensembl gene IDs: ENSG00000143119Ensembl transcript IDs: ENST00000271324.6, ENST00000464329.1, ENST00000471220.5, ENST00000476408.1, ENST00000497404.1, ENST00000648608.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGGTTCACCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTaGCTCTCTTGTCTAAAAGATGCTCAGATATTAGTTTCACCACTT | + |
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Preference number: 1 (lower is better) Translates to: LGSPFDVGPLNPVCL*LSCLKDAQILVSPL Trigger: AAGTGGTGAAACTAATATCTGAGCATCTTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGGTGAACCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGAGATGGGATGTGCCTaGCCAACACCCACTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKEMGCA*PTPTSL Trigger: CAGAGAAGTGGGTGTTGGCCAGGCACATCCCATCTC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAATTAGTTTCACCACTTTaGGAGACATGGCTGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLVSPL*ETWLLP Trigger: CGGCAGCAGCCATGTCTCTCAAAGTGGTGAAACTAA...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGGAGGAGGATCATCCTaGAGTGATCATGTAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKGGGSS*SDHVGL Trigger: AAGCCCTACATGATCACTGCAGGATGATCCTCCTCC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAATTGCATTTCCGGAGATaGAACAAGTCTCTTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLHFRR*NKSLHH Trigger: GTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAA...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGATGCTGGTGGGCCACTaGTCCAATCACTCGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQMLVGH*SNHSCH Trigger: ATGGCACGAGTGATTGGACCAGTGGCCCACCAGCAT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGAGATGGGATGTGCCTaGCCAACACCCACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQEMGCA*PTPTSL Trigger: CAGAGAAGTGGGTGTTGGCCAGGCACATCCCATCTC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCCCACGCTGCCTTGGTaGTATTGTCTGAGTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQPTLPW*YCLSGN Trigger: GTTACCACTCAGACAATAGCACCAAGGCAGCGTGGG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGCAGTTCAGGGTCAGTaGAAAGGACATCCCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQAVQGQ*KGHPQH Trigger: GTGTTGGGGATGTCCTTTGCACTGACCCTGAACTGC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGAGTCCCACGCTGCCTTaGTGCTATTGTCTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQSPTLP*CYCLSG Trigger: ACCACTCAGACAATAGCACCAAGGCAGCGTGGGACT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCTCATGCCCATGCCGTaGTATTCTTGCCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQLMPMP*YSCPFP Trigger: TGGAAAAGGGCAAGAATATCACGGCATGGGCATGAG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAACACATTGCCCAGCGTaGGGGAGGGGAGGTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKTHCPA*GRGGYG Trigger: TCCATAACCTCCCCTCCCTCACGCTGGGCAATGTGT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGAGGATCATCCTGCAGTaGTCATGTAGGGCTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQRIILQ*SCRASC Trigger: GCATGAAGCCCTACATGATCACTGCAGGATGATCCT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTTAGTTTCACCACTTTaGGAGACATGGCTGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQLVSPL*ETWLLP Trigger: CGGCAGCAGCCATGTCTCTCAAAGTGGTGAAACTAA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGAGAAACAGAGGGTTGTaGCAATGGTCCAGTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQRNRGL*QWSSEP Trigger: AGGCTCACTGGACCATTGTCACAACCCTCTGTTTCT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGGAGGAGGATCATCCTaGAGTGATCATGTAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQGGGSS*SDHVGL Trigger: AAGCCCTACATGATCACTGCAGGATGATCCTCCTCC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGCCCTATGGTCTGGCTaGTTTTGTCAATCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQALWSG*FCQSGS Trigger: ACTGCCAGATTGACAAAACCAGCCAGACCATAGGGC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTCCCAAAGCCCAAAATaGAGCAGCCACAGATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQSQSPK*SSHRSK Trigger: TTTGGATCTGTGGCTGCTGCATTTTGGGCTTTGGGA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGAAAGATTGTCTTGCTaGCTGAGATGGGATGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQERLSC*LRWDVP Trigger: AGGCACATCCCATCTCAGGCAGCAAGACAATCTTTC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAATGCTGGTGGGCCACTaGTCCAATCACTCGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKMLVGH*SNHSCH Trigger: ATGGCACGAGTGATTGGACCAGTGGCCCACCAGCAT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCTTTGGGGAGAAGACTaGGCATTATTTAGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQLWGED*ALFRGW Trigger: CCAGCCTCTAAATAATGCCCAGTCTTCTCCCCAAAG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACCCACGCTGCCTTGGTaGTATTGTCTGAGTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKPTLPW*YCLSGN Trigger: GTTACCACTCAGACAATAGCACCAAGGCAGCGTGGG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGCAGTTCAGGGTCAGTaGAAAGGACATCCCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKAVQGQ*KGHPQH Trigger: GTGTTGGGGATGTCCTTTGCACTGACCCTGAACTGC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAAGTCCCACGCTGCCTTaGTGCTATTGTCTGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKSPTLP*CYCLSG Trigger: ACCACTCAGACAATAGCACCAAGGCAGCGTGGGACT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCAGATCATAGCCCTATaGTCTGGCTGGTTTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQQIIAL*SGWFCQ Trigger: TTGACAAAACCAGCCAGACCATAGGGCTATGATCTG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACTCATGCCCATGCCGTaGTATTCTTGCCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLMPMP*YSCPFP Trigger: TGGAAAAGGGCAAGAATATCACGGCATGGGCATGAG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACTTGGTGCTATTGTCTaGGTGGTAACGGTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLGAIV*VVTVDA Trigger: AGCATCCACCGTTACCACTCAGACAATAGCACCAAG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAAGGATCATCCTGCAGTaGTCATGTAGGGCTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKRIILQ*SCRASC Trigger: GCATGAAGCCCTACATGATCACTGCAGGATGATCCT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACCTGGGTTCACCCTTTaGTGTTGGGCCATTAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKPGFTL*CWAIKS Trigger: GGATTTAATGGCCCAACATCAAAGGGTGAACCCAGG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAAGAAACAGAGGGTTGTaGCAATGGTCCAGTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKRNRGL*QWSSEP Trigger: AGGCTCACTGGACCATTGTCACAACCCTCTGTTTCT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTGGTCCAATCACTCGTaGCATTTATACCACAACACT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQWSNHS*HLYHNT Trigger: AGTGTTGTGGTATAAATGGCACGAGTGATTGGACCA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCTTCAACTAGTCTCTTaGTTGACTTTGGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQLQLVS*LTLGRR Trigger: TCTTCTCCCCAAAGTCAAGCAAGAGACTAGTTGAAG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAAGCTACTCATGCCCATaGCGTGATATTCTTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKSYSCP*RDILAL Trigger: AAGGGCAAGAATATCACGGCATGGGCATGAGTAGCT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTTTATACCACAACACTaGAGAAATGACTGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQFIPQH*RNDWME Trigger: CTCCATCCAGTCATTTCTGCAGTGTTGTGGTATAAA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGAAAGATTGTCTTGCTaGCTGAGATGGGATGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKERLSC*LRWDVP Trigger: AGGCACATCCCATCTCAGGCAGCAAGACAATCTTTC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACATAGCCCTATGGTCTaGCTGGTTTTGTCAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKHSPMV*LVLSIW Trigger: CCAGATTGACAAAACCAGCCAGACCATAGGGCTATG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACTTTGGGGAGAAGACTaGGCATTATTTAGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLWGED*ALFRGW Trigger: CCAGCCTCTAAATAATGCCCAGTCTTCTCCCCAAAG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTCCAAAAGAGCAAGTTaGAGAAAAACAGGACATACT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQSKRAS*RKTGHT Trigger: AGTATGTCCTGTTTTTCTTCAACTTGCTCTTTTGGA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACAGATCATAGCCCTATaGTCTGGCTGGTTTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKQIIAL*SGWFCQ Trigger: TTGACAAAACCAGCCAGACCATAGGGCTATGATCTG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGCTTCATGCTATAAATaGTTTTGCATTTCCGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQASCYK*FCISGD Trigger: ATCTCCGGAAATGCAAAACCATTTATAGCATGAAGC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACCTTCAAGACCACCTTaGATGTTTCTTCAGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKPSRPP*MFLQSV Trigger: GACAGACTGAAGAAACATCCAAGGTGGTCTTGAAGG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAATGGTCCAATCACTCGTaGCATTTATACCACAACACT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKWSNHS*HLYHNT Trigger: AGTGTTGTGGTATAAATGGCACGAGTGATTGGACCA...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGAATCCAGTTTGTCTTTaGCTCTCTTGTCTAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: WFCISGDETSLFTTGLLQNPVCL*LSCLKD Trigger: ATCTTTTAGACAAGAGAGGCAAAGACAAACTGGATT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACTTCAACTAGTCTCTTaGTTGACTTTGGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKLQLVS*LTLGRR Trigger: TCTTCTCCCCAAAGTCAAGCAAGAGACTAGTTGAAG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR TCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAATCCAAAAGAGCAAGTTaGAGAAAAACAGGACATACT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKSKRAS*RKTGHT Trigger: AGTATGTCCTGTTTTTCTTCAACTTGCTCTTTTGGA...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACAAAAATTCATATCCTaGGTTCACCCTTTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKQKFIS*VHPLML Trigger: CAACATCAAAGGGTGAACCCAGGATATGAATTTTTG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR GCA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAAATCCAGTTTGTCTTTaGCTCTCTTGTCTAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKNPVCL*LSCLKD Trigger: ATCTTTTAGACAAGAGAGGCAAAGACAAACTGGATT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS CCA 90 bp | ACCAAGAAACATCTTGCCTGGGATTTAGGCACCATCTCCCCGACTTaGGGCACCACATCTGCTGTAAGGACTCACCGACATAAGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TKKHLAWDLGTISPT*GTTSAVRTHRHKQT Trigger: TGTCTGCTTATGTCGGTGAGTCCTTACAGCAGATGTGGTGCCCCAAGTCGGGGAGATGGTGCCTAAATCCCAGGCAAGATGTTTCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGGAGTCCCACGCTGCCTaGGTGCTATTGTCTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQESHAA*VLLSEW Trigger: CCACTCAGACAATAGCACCAAGGCAGCGTGGGACTC...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGAGTCCCACGCTGCCTaGGTGCTATTGTCTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKESHAA*VLLSEW Trigger: CCACTCAGACAATAGCACCAAGGCAGCGTGGGACTC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGATGGTCTGGCTGGTTTaGTCAATCTGGCAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQMVWLV*SIWQFR Trigger: CCTGAACTGCCAGATTGACAAAACCAGCCAGACCAT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGCAACTAGTCTCTTGCTaGACTTTGGGGAGAAGACTG | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQQLVSC*TLGRRL Trigger: CAGTCTTCTCCCCAAAGTCAAGCAAGAGACTAGTTG...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS CCA 90 bp | TCACCTGTCCGTGGGACCCTAGTCATACATAATATACTATTGGTCTaGGCAGACTTGGCTGATCTGAGGTACCAATCTCATTTTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: SPVRGTLVIHNILLV*ADLADLRYQSHFPM Trigger: CATAGGAAAATGAGATTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAGGGTCCCACGGACAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACATGCCGTGATATTCTaGCCCTTTTCCAGGCACCGT | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKHAVIF*PFSRHR Trigger: ACGGTGCCTGGAAAAGGGCAAGAATATCACGGCATG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAATGGTCTGGCTGGTTTaGTCAATCTGGCAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKMVWLV*SIWQFR Trigger: CCTGAACTGCCAGATTGACAAAACCAGCCAGACCAT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGATGAGATCTTGCCCTTaGGAGAAAGAGAACTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQMRSCP*EKENCV Trigger: TACACAGTTCTCTTTCTCCAAAGGGCAAGATCTCAT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGTTGTCTTTGCCTCTCTaGTCTAAAAGATGCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQLSLPL*SKRCSD Trigger: ATCTGAGCATCTTTTAGACAAGAGAGGCAAAGACAA...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAACAACTAGTCTCTTGCTaGACTTTGGGGAGAAGACTG | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKQLVSC*TLGRRL Trigger: CAGTCTTCTCCCCAAAGTCAAGCAAGAGACTAGTTG...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGATCCAAAAGAGCAAGTaGAAGAAAAACAGGACATAC | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQIQKSK*KKNRTY Trigger: GTATGTCCTGTTTTTCTTCAACTTGCTCTTTTGGAT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGCATTTCCGGAGATGAAACAAGTCTCTTCACCACAGGACTACTGCAGAAATCCAGTTTGTCTTaGCCTCTCTTGTCTAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: WFCISGDETSLFTTGLLQKSSLS*PLLSKR Trigger: TCTTTTAGACAAGAGAGGCAAAGACAAACTGGATTT...CTGCAGTAGTCCTGTGGTGAAGAGACTTGTTTCATCTCCGGAAATGCAAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAGCCATTAAATCCAGTTaGTCTTTGCCTCTCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKAIKSS*SLPLLS Trigger: AGACAAGAGAGGCAAAGACAAACTGGATTTAATGGC...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS-3UTR CAA 90 bp | CCCTTTGATGTTGGGCCATTAAATCCAGTTTGTCTTTGCCTCTCTTGTCTAAAAATCCAAAAGAGCAAGTaGAAGAAAAACAGGACATAC | + |
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Preference number: 5 (lower is better) Translates to: PFDVGPLNPVCLCLSCLKIQKSK*KKNRTY Trigger: GTATGTCCTGTTTTTCTTCAACTTGCTCTTTTGGAT...TTTTAGACAAGAGAGGCAAAGACAAACTGGATTTAATGGCCCAACATCAAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000271324.6 ENST00000648608.1 |
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| CDS CCA 72 bp | CATCTTGCCTGGGATTTAGGCACCATCTCCCCGACTTaGGGCACCACATCTGCTGTAAGGACTCACCGACAT | + |
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Preference number: 6 (lower is better) Translates to: HLAWDLGTISPT*GTTSAVRTHRH Trigger: ATGTCGGTGAGTCCTTACAGCAGATGTGGTGCCCCAAGTCGGGGAGATGGTGCCTAAATCCCAGGCAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CAA 72 bp | ACATCTTGCCTGGGATTTAGGCACCATCTCCCCGACTaGGGGCACCACATCTGCTGTAAGGACTCACCGACA | + |
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Preference number: 6 (lower is better) Translates to: TSCLGFRHHLPD*GHHICCKDSPT Trigger: TGTCGGTGAGTCCTTACAGCAGATGTGGTGCCCCAAGTCGGGGAGATGGTGCCTAAATCCCAGGCAAGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CCA 72 bp | CACCACAGGACTACTGCAGATCATAGCCCTATGGTCTaGCTGGTTTTGTCAATCTGGCAGTTCAGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: HHRTTADHSPMV*LVLSIWQFRVS Trigger: ACTGACCCTGAACTGCCAGATTGACAAAACCAGCCAGACCATAGGGCTATGATCTGCAGTAGTCCTGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000271324.6 ENST00000464329.1 ENST00000476408.1 ENST00000497404.1 ENST00000648608.1 |
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| CDS CCA 72 bp | CTCTTCACCACAGGACTACTGCAGATCATAGCCCTATaGTCTGGCTGGTTTTGTCAATCTGGCAGTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LFTTGLLQIIAL*SGWFCQSGSSG Trigger: CCCTGAACTGCCAGATTGACAAAACCAGCCAGACCATAGGGCTATGATCTGCAGTAGTCCTGTGGTGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000271324.6 ENST00000464329.1 ENST00000476408.1 ENST00000497404.1 ENST00000648608.1 |
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| CDS GCA 72 bp | TCTTGCCTGGTGAAGATTGTCACTACTTTTGCCACATaGCATAAGGGCCCCAGAGAGAATGCTGCTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: SCLVKIVTTFAT*HKGPRENAAPF Trigger: AAACGGAGCAGCATTCTCTCTGGGGCCCTTATGGCATGTGGCAAAAGTAGTGACAATCTTCACCAGGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476408.1 |
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| CDS CAA 72 bp | CTGTGTTACAGGATCCCAGTGTCCTTCAAGACCACCTaGGATGTTTCTTCAGTCTGTCCTCAGGAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LCYRIPVSFKTT*DVSSVCPQEEG Trigger: CCCTTCTTCCTGAGGACAGACTGAAGAAACATCCAAGGTGGTCTTGAAGGACACTGGGATCCTGTAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648608.1 |
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| CDS CAA 72 bp | CCTGTCCGTGGGACCCTAGTCATACATAATATACTATaGGTCTGGGCAGACTTGGCTGATCTGAGGTACCAA | + |
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Preference number: 6 (lower is better) Translates to: PVRGTLVIHNIL*VWADLADLRYQ Trigger: TTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAGGGTCCCACGGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CAA 90 bp | CCTCTTTCACCTGTCCGTGGGACCCTAGTCATACATAATATACTATaGGTCTGGGCAGACTTGGCTGATCTGAGGTACCAATCTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: PLSPVRGTLVIHNIL*VWADLADLRYQSHF Trigger: AAAATGAGATTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAGGGTCCCACGGACAGGTGAAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CCA 72 bp | CGTGGGACCCTAGTCATACATAATATACTATTGGTCTaGGCAGACTTGGCTGATCTGAGGTACCAATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RGTLVIHNILLV*ADLADLRYQSH Trigger: ATGAGATTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAGGGTCCCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CAA 90 bp | CGTGGGACCCTAGTCATACATAATATACTATTGGTCTGGGCAGACTaGGCTGATCTGAGGTACCAATCTCATTTTCCTATGATCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGTLVIHNILLVWAD*ADLRYQSHFPMIFL Trigger: CAGAAAGATCATAGGAAAATGAGATTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAGGGTCCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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| CDS CAA 72 bp | CTAGTCATACATAATATACTATTGGTCTGGGCAGACTaGGCTGATCTGAGGTACCAATCTCATTTTCCTATG | + |
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Preference number: 6 (lower is better) Translates to: LVIHNILLVWAD*ADLRYQSHFPM Trigger: CATAGGAAAATGAGATTGGTACCTCAGATCAGCCAAGTCTGCCCAGACCAATAGTATATTATGTATGACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471220.5 |
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