Pregenerated sensors for CD52 (Homo sapiens)
Ensembl gene IDs: ENSG00000169442Ensembl transcript IDs: ENST00000374213.3, ENST00000470468.1, ENST00000492808.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTACAAGGGTAACTTTATTGACCCCCAGCTGGGCACTGCTTGGCCCCTACATCAACCCCTCCCAAAGATaGAGGGGATTCTCTTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: STRVTLLTPSWALLGPYINPSQR*RGFSCE Trigger: CTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTT...GATGTAGGGGCCAAGCAGTGCCCAGCTGGGGGTCAATAAAGTTACCCTTGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| 3UTR TCA 72 bp | CCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTaGTGTCTGGCATCAACCCCTCCCAAAGATGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: PPWHCLSTSTTW*CLASTPPKDGG Trigger: CCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTGATGTCTGGCATCATGGAGGGGATTCTCTaGCGAGTGATGGTGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VAPMALPVNFYNLVMSGIMEGIL*RVMVAA Trigger: AGCTGCCACCATCACTCGCAAGAGAATCCCCTCCAT...GATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| 3UTR CCA 72 bp | GGCACTGCCTGTCAACTTCTACAACCTGGTGATGTCTaGCATCAACCCCTCCCAAAGATGGAGGGGATTCTC | + |
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Preference number: 3 (lower is better) Translates to: GTACQLLQPGDV*HQPLPKMEGIL Trigger: GAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR GCA 90 bp | GCAAGTACAAGGGTAACTTTATTGACCCCCAGCTGGGCACTGCTTGGCCCCTACCCCCCAGCTGGGCACTaGTTGGCCCCTACATCATTA | + |
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Preference number: 4 (lower is better) Translates to: ASTRVTLLTPSWALLGPYPPAGH*LAPTSL Trigger: TAATGATGTAGGGGCCAAGCAGTGCCCAGCTGGGGG...GTAGGGGCCAAGCAGTGCCCAGCTGGGGGTCAATAAAGTTACCCTTGTACTTGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGATTATTGACCCCCAGCTaGGCACTGCTTGGCCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: PGDVWHQPLPKMEGILLRLLTPS*ALLGPY Trigger: GTAGGGGCCAAGCAGTGCCCAGCTGGGGGTCAATAA...TCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR GCA 90 bp | GATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGTGATGTGGATGCTGAGGGGCTaGTGGTTTGGCTGGTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: DVWHQPLPKMEGILLRVMWMLRG*WFGWCR Trigger: ACGACACCAGCCAAACCAGCAGCCCCTCAGCATCCA...CATCACTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | GCTGTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTGATGTCTGGCATGCTGAGGGGCTGCTaGTTTGGCTGGTGTCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: AVAPMALPVNFYNLVMSGMLRGC*FGWCRF Trigger: AAAACGACACCAGCCAAACCAGCAGCCCCTCAGCAT...GCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGATGGCTGTTGCCCCCATaGCACTGCCTGTCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PGDVWHQPLPKMEGILLRWLLPP*HCLSTS Trigger: AGAAGTTGACAGGCAGTGCCATGGGGGCAACAGCCA...TCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | AGTACAAGGGTAACTTTATTGACCCCCAGCTGGGCACTGCTTGGCCCCTACATCCAGCTGGGCACTGCTTaGCCCCTACATCATTACCCC | + |
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Preference number: 4 (lower is better) Translates to: STRVTLLTPSWALLGPYIQLGTA*PLHHYP Trigger: GGGGTAATGATGTAGGGGCCAAGCAGTGCCCAGCTG...GATGTAGGGGCCAAGCAGTGCCCAGCTGGGGGTCAATAAAGTTACCCTTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR GCA 90 bp | CCCTATTTTGGCTGTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTCCCTATTTTGGCTGTTaGCCCCATGGCACTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PYFGCCPHGTACQLLQPGPYFGC*PHGTAC Trigger: ACAGGCAGTGCCATGGGGGCAACAGCCAAAATAGGG...ACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAACAGCCAAAATAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR TCA 90 bp | CTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGTGATGGTGGCGGTGTCGTTTTGTCCTaGGAGTCCAGTTTGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: LASTPPKDGGDSLASDGGGVVLS*ESSLYL Trigger: CAGATACAAACTGGACTCTCAGGACAAAACGACACC...GCCACCATCACTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR TCA 90 bp | CTTCTACAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTTATGTTGCTGGATGCTaGGGGGCTGCTGGTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLQPGDVWHQPLPKMEGIYVAGC*GAAGLA Trigger: AGCCAAACCAGCAGCCCCTCAGCATCCAGCAACATA...AATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR TCA 90 bp | CCCATGGCACTGCCTGTCAACTTCTACAACCTGGTGATGTCTGGCATCAACCCCACTTCTACAACCTGGTaGTGTCTGGCATCAACCCCT | + |
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Preference number: 4 (lower is better) Translates to: PMALPVNFYNLVMSGINPTSTTW*CLASTP Trigger: AGGGGTTGATGCCAGACATCACCAGGTTGTAGAAGT...GGGGTTGATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | CAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCAACCTGGTGATGTCTaGCATCAACCCCTCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QPGDVWHQPLPKMEGILLQPGDV*HQPLPK Trigger: CTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTG...CAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR GCA 90 bp | CTTCTACAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTTTGCCCCCATGGCACTaGCTGTCAACTTCTACAACC | + |
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Preference number: 4 (lower is better) Translates to: LLQPGDVWHQPLPKMEGILPPWH*LSTSTT Trigger: GGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAA...AATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | TACAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTGGCTGCTGGTTTGGCTaGTGTCGTTTTGTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: YNLVMSGINPSQRWRGFSGCWFG*CRFVLR Trigger: TCTCAGGACAAAACGACACCAGCCAAACCAGCAGCC...AGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | CCCTATTTTGGCTGTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTCTGAAGCAGAAGAGGTaGATTATGGCATTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: PYFGCCPHGTACQLLQPGLKQKR*IMALAT Trigger: CGTGGCCAATGCCATAATCCACCTCTTCTGCTTCAG...ACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAACAGCCAAAATAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR TCA 90 bp | ATGGCACTGCCTGTCAACTTCTACAACCTGGTGATGTCTGGCATCAACCCCTCCACGTGTCACCTCAACTaGAGCAGAAGAGGTGGATTA | + |
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Preference number: 4 (lower is better) Translates to: MALPVNFYNLVMSGINPSTCHLN*SRRGGL Trigger: TAATCCACCTCTTCTGCTTCAGTTGAGGTGACACGT...GGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | TATTTTGGCTGTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTGATAACCCCTCCCAAAGATaGAGGGGATTCTCTTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: YFGCCPHGTACQLLQPGDNPSQR*RGFSCE Trigger: CTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTT...ATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAACAGCCAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAAGAAGAGGTGGATTATaGCATTGGCCACGAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: PGDVWHQPLPKMEGILLRRRGGL*HWPRRK Trigger: TTTTCTTCGTGGCCAATGCCATAATCCACCTCTTCT...TCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR GCA 90 bp | ACAAGGGTAACTTTATTGACCCCCAGCTGGGCACTGCTTGGCCCCTACATCATTCGAAGAAAAGGAAAATaGCTCCGCTTATGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRVTLLTPSWALLGPYIIRRKGK*LRLCCW Trigger: CCAGCAACATAAGCGGAGGCATTTTCCTTTTCTTCG...AATGATGTAGGGGCCAAGCAGTGCCCAGCTGGGGGTCAATAAAGTTACCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CCA 90 bp | GCCTGTCAACTTCTACAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGGTGGATTATGGCATTaGCCACGAAGAAAAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ACQLLQPGDVWHQPLPKMGGLWH*PRRKGK Trigger: TTTTCCTTTTCTTCGTGGCCAATGCCATAATCCACC...CATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTGTAGAAGTTGACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CAA 90 bp | CTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGATGCCTCCGCTTATGTaGCTGGATGCTGAGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LVMSGINPSQRWRGFSCEMPPLM*LDAEGL Trigger: CAGCCCCTCAGCATCCAGCAACATAAGCGGAGGCAT...CTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CAA 90 bp | CAACCTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCCAGCTGGGCACTGCTaGGCCCCTACATCATTACCC | + |
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Preference number: 5 (lower is better) Translates to: QPGDVWHQPLPKMEGILLPAGHC*APTSLP Trigger: GGGTAATGATGTAGGGGCCAAGCAGTGCCCAGCTGG...CAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS TCA 90 bp | CAAGCTGTTCTTGATCAAGAACTTGATGGCTCCGGTCTGCTGTACTaGCTCCCCTCTGGGCACCTGGGATGCTACCAAAGCTGCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QAVLDQELDGSGLLY*LPSGHLGCYQSCLL Trigger: CAGGAGGCAGCTTTGGTAGCATCCCAGGTGCCCAGAGGGGAGTCAGTACAGCAGACCGGAGCCATCAAGTTCTTGATCAAGAACAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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| CDS-3UTR CAA 90 bp | CTGGTGATGTCTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGATGGAGGGGATTCTCTaGCGAGTGATGGTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LVMSGINPSQRWRGFSCEMEGIL*RVMVAA Trigger: AGCTGCCACCATCACTCGCAAGAGAATCCCCTCCAT...CTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAGACATCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CAA 90 bp | CTGGCATCAACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGTGATGGTGGCACAAGGGTAACTTTATaGACCCCCAGCTGGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LASTPPKDGGDSLASDGGTRVTL*TPSWAL Trigger: CAGTGCCCAGCTGGGGGTCAATAAAGTTACCCTTGT...GCCACCATCACTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGTTGATGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS CCA 90 bp | TGCCTCCGCTTATGTTGCTGGATGCTGAGGGGCTGCTGGTTTGGCTaGTGTCGTTTTGTCCTGAGAGTCCAGTTTGTATCTGGGATGCTA | + |
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Preference number: 5 (lower is better) Translates to: CLRLCCWMLRGCWFG*CRFVLRVQFVSGML Trigger: TAGCATCCCAGATACAAACTGGACTCTCAGGACAAAACGACACCAGCCAAACCAGCAGCCCCTCAGCATCCAGCAACATAAGCGGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470468.1 |
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| CDS GCA 90 bp | ATGGTGATCAAGCTGTTCTTGATCAAGAACTTGATGGCTCCGGTCTaGTGTACTGACTCCCCTCTGGGCACCTGGGATGCTACCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: MVIKLFLIKNLMAPV*CTDSPLGTWDATKA Trigger: AGCTTTGGTAGCATCCCAGGTGCCCAGAGGGGAGTCAGTACAGCAGACCGGAGCCATCAAGTTCTTGATCAAGAACAGCTTGATCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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| CDS-3UTR CAA 90 bp | ACCCCTCCCAAAGATGGAGGGGATTCTCTTGCGAGTGATGGTGGCAGCTGTTTCAGGTGGATTATGGCATaGGCCACGAAGAAAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: TPPKDGGDSLASDGGSCFRWIMA*ATKKRK Trigger: TTTCCTTTTCTTCGTGGCCAATGCCATAATCCACCT...GAAACAGCTGCCACCATCACTCGCAAGAGAATCCCCTCCATCTTTGGGAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS-3UTR CAA 90 bp | TATTTTGGCTGTTGCCCCCATGGCACTGCCTGTCAACTTCTACAACCTGGTGATAGGAAGCGCTTCATTTaGGTAGGATCTTCGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YFGCCPHGTACQLLQPGDRKRFI*VGSSWL Trigger: CAGCCACGAAGATCCTACCAAAATGAAGCGCTTCCT...ATCACCAGGTTGTAGAAGTTGACAGGCAGTGCCATGGGGGCAACAGCCAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374213.3 |
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| CDS TCA 72 bp | CTTGATCAAGAACTTGATGGCTCCGGTCTGCTGTACTaGCTCCCCTCTGGGCACCTGGGATGCTACCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LDQELDGSGLLY*LPSGHLGCYQS Trigger: GCTTTGGTAGCATCCCAGGTGCCCAGAGGGGAGTCAGTACAGCAGACCGGAGCCATCAAGTTCTTGATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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| CDS GCA 72 bp | AAATGCCTCCGCTTATGTTGCTGGATGCTGAGGGGCTaGTGGTTTGGCTGGTGTCGTTTTGTCCTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: KCLRLCCWMLRG*WFGWCRFVLRV Trigger: GACTCTCAGGACAAAACGACACCAGCCAAACCAGCAGCCCCTCAGCATCCAGCAACATAAGCGGAGGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374213.3 ENST00000470468.1 |
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| CDS GCA 72 bp | AAGCTGTTCTTGATCAAGAACTTGATGGCTCCGGTCTaGTGTACTGACTCCCCTCTGGGCACCTGGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: KLFLIKNLMAPV*CTDSPLGTWDA Trigger: AGCATCCCAGGTGCCCAGAGGGGAGTCAGTACAGCAGACCGGAGCCATCAAGTTCTTGATCAAGAACAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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| CDS CCA 72 bp | TTATGTTGCTGGATGCTGAGGGGCTGCTGGTTTGGCTaGTGTCGTTTTGTCCTGAGAGTCCAGTTTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: LCCWMLRGCWFG*CRFVLRVQFVS Trigger: AGATACAAACTGGACTCTCAGGACAAAACGACACCAGCCAAACCAGCAGCCCCTCAGCATCCAGCAACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374213.3 ENST00000470468.1 |
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| CDS CAA 90 bp | TTCTTGATGGAGATTAAGCTGGTTTTGATGGTGATCAAGCTGTTCTaGATCAAGAACTTGATGGCTCCGGTCTGCTGTACTGACTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: FLMEIKLVLMVIKLF*IKNLMAPVCCTDSP Trigger: AGGGGAGTCAGTACAGCAGACCGGAGCCATCAAGTTCTTGATCAAGAACAGCTTGATCACCATCAAAACCAGCTTAATCTCCATCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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| CDS CAA 90 bp | ATGGAGCTGCAACTAGAACTGTTCTTGATGGAGATTAAGCTGGTTTaGATGGTGATCAAGCTGTTCTTGATCAAGAACTTGATGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: MELQLELFLMEIKLV*MVIKLFLIKNLMAP Trigger: CGGAGCCATCAAGTTCTTGATCAAGAACAGCTTGATCACCATCAAAACCAGCTTAATCTCCATCAAGAACAGTTCTAGTTGCAGCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492808.5 |
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