RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD46 (Homo sapiens)

Ensembl gene IDs: ENSG00000117335

Ensembl transcript IDs: ENST00000322875.8, ENST00000322918.9, ENST00000354848.5, ENST00000357714.5, ENST00000358170.6, ENST00000360212.6, ENST00000367041.5, ENST00000367042.6, ENST00000367047.5, ENST00000462968.2, ENST00000469535.5, ENST00000471987.1, ENST00000480003.5, ENST00000636114.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGCATATTCAGCTCCACCATCTGCTTT +
Preference number: 1 (lower is better)
Translates to: PGCGIYSASLLCWSG*FSLVSGIFSSTICF
Trigger: AAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR CCA 90 bp TTTGGGAAAACAACAAGACTACAGTGTTCACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAA +
Preference number: 1 (lower is better)
Translates to: FGKTTRLQCSLRTMK*HSCYGCQSPLTSYE
Trigger: TTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR TCA 90 bp GCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTT +
Preference number: 1 (lower is better)
Translates to: ASLKETAWLRDSVEG*DLPEYKVLPELYLL
Trigger: AAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR TCA 90 bp GAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCTGAAATTACTGATATATTCGATCAG +
Preference number: 1 (lower is better)
Translates to: EVALLLWLSESSHFL*KDASDSEITDIFDQ
Trigger: CTGATCGAATATATCAGTAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CCA 90 bp TTATTTAAGGAGGGAGAGAAAAACACATGTAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAA +
Preference number: 1 (lower is better)
Translates to: LFKEGEKNTCNQNSE*VTQPKRTYGVLFGK
Trigger: TTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: VFTSHHEVALLLWLSESSVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACCTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 2 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: VFTSHHEVALLLWLSESSACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVERSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: VFTSHHEVALLLWLSESSNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 2 (lower is better)
Translates to: VFTSHHEVALLLWLSESSIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 2 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCACACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 2 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCATCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVEMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 2 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTTTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 2 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVESQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 2 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVENTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGATCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVEIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 2 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVETSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR TCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 2 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVEVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: FRLLASLKETAWLRDSVEKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 2 (lower is better)
Translates to: CYGCQSPLTSYERMHLILHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 2 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: CYGCQSPLTSYERMHLILSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 2 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGATCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: CYGCQSPLTSYERMHLILKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 2 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CAA 90 bp CTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTaGGTACAATCAACAGCAAATAGACAAAATGAAGTTACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LSIKCYLSYIYFFHP*VQSTANRQNEVTFL
Trigger: CAGGAAGGTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR TCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 2 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGATTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 2 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: FPIISSSRQCFFGPICATVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTATTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 2 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: KACETGINFNSVLNSEFLVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR GCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 2 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR TCA 72 bp GGAAAACAACAAGACTACAGTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTC +
Preference number: 3 (lower is better)
Translates to: GKQQDYSVHFAP*SGTPVMAVRVL
Trigger: GAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR TCA 72 bp GGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGCATATTCAGCTCCACC +
Preference number: 3 (lower is better)
Translates to: GIYSASLLCWSG*FSLVSGIFSST
Trigger: GGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR CCA 72 bp ACAACAAGACTACAGTGTTCACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGTCAGAGTCCTCTCACT +
Preference number: 3 (lower is better)
Translates to: TTRLQCSLRTMK*HSCYGCQSPLT
Trigger: AGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 3 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR TCA 72 bp AAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAAGTGCTACCTGAGCTA +
Preference number: 3 (lower is better)
Translates to: KETAWLRDSVEG*DLPEYKVLPEL
Trigger: TAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 3 (lower is better)
Translates to: FRLLASLKETAWLRDSVEHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CAA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: CYGCQSPLTSYERMHLILNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR-3UTR CAA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCACAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
3UTR CCA 72 bp GAGGGAGAGAAAAACACATGTAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGAACATACGGAGTTCTC +
Preference number: 3 (lower is better)
Translates to: EGEKNTCNQNSE*VTQPKRTYGVL
Trigger: GAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 3 (lower is better)
Translates to: KACETGINFNSVLNSEFLRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 3 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 3 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 3 (lower is better)
Translates to: FPIISSSRQCFFGPICATFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: FPIISSSRQCFFGPICATYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTACAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR-3UTR CAA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCAAAGCATCCAGTGCTaGAGGACAGGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCQSIQC*RTGGRG
Trigger: GCCACGCCCACCTGTCCTGCAGCACTGGATGCTTTG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAAGTAGGCCTAGGACCTaGGGCACTGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSSRPRT*GTGRWR
Trigger: TCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACT...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAGGCCGGGAGGCTCCATaGGCGGCGCGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLGREAP*AARKTL
Trigger: CAGCGTCTTCCGCGCCGCGCATGGAGCCTCCCGGCC...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CAA 72 bp GCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: AVAVPAFRLLAS*KETAWLRDSVE
Trigger: CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCATGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTCTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CAA 72 bp TGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGAGGGCTGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: CFSPAGFFERNC*AKGLSRGLRSA
Trigger: GGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGCAAAGCATCCAGTGCTaGAGGACAGGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILQSIQC*RTGGRG
Trigger: GCCACGCCCACCTGTCCTGCAGCACTGGATGCTTTG...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGAAGTCGACACTGAATaGCTCAAAGCTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSEVDTE*LKAGGF
Trigger: AAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322875.8
ENST00000358170.6
ENST00000367047.5
CDS-3UTR TCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGGAAGTCGACACTGAATaGCTCAAAGCTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLEVDTE*LKAGGF
Trigger: AAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTC...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322875.8
ENST00000358170.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGCTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAAGTAGGCCTAGGACCTaGGGCACTGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLSRPRT*GTGRWR
Trigger: TCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACT...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAGTAGGCCTAGGACCTaGGGCACTGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLSRPRT*GTGRWR
Trigger: TCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVESIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACACAGGGAAGTCCCTTCTaGGTCCAGATATGGGACGCA +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTQGSPF*VQIWDA
Trigger: TGCGTCCCATATCTGGACCCAGAAGGGACTTCCCTG...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAGGATCCCGTATATATaGACATGTTTCTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLRIPYI*TCFSGE
Trigger: TTCTCCGGAGAAACATGTCCATATATACGGGATCCT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367047.5
CDS-3UTR TCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTATATCCTGGATAATTTaGGACTGGAGGCTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSISWII*DWRLVS
Trigger: ACTTACAAGCCTCCAGTCTCAAATTATCCAGGATAT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR TCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAAGTCGACACTGAATaGCTCAAAGCTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSEVDTE*LKAGGF
Trigger: AAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTC...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322875.8
ENST00000358170.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATAGTAGGCCTAGGACCTaGGGCACTGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHSRPRT*GTGRWR
Trigger: TCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACT...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCAGTAGGCCTAGGACCTaGGGCACTGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLSRPRT*GTGRWR
Trigger: TCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGCAAAGCATCCAGTGCTaGAGGACAGGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLQSIQC*RTGGRG
Trigger: GCCACGCCCACCTGTCCTGCAGCACTGGATGCTTTG...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACAAAGCATCCAGTGCTaGAGGACAGGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQQSIQC*RTGGRG
Trigger: GCCACGCCCACCTGTCCTGCAGCACTGGATGCTTTG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCAAAGCATCCAGTGCTaGAGGACAGGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHQSIQC*RTGGRG
Trigger: GCCACGCCCACCTGTCCTGCAGCACTGGATGCTTTG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVEKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGACCTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVETFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGGT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322918.9
ENST00000357714.5
ENST00000367041.5
CDS-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAGGTTTTGTACTAGATaGAGGCAGCACTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLRFCTR*RQHFKT
Trigger: TGTCTTAAAGTGCTGCCTCCATCTAGTACAAAACCT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322875.8
ENST00000358170.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACACTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR TCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCATCAGTTAGGTATGTaGCTTTCTTCTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCHQLGM*LSSSSF
Trigger: AAAGGAGGAAGAAGAAAGGCACATACCTAACTGATG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVEACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: VFTSHHEVALLLWLSESSTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: TGKPGCGIYSASLLCWSGTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...ACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR TCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAATATCCTGGATAATTTaGGACTGGAGGCTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSISWII*DWRLVS
Trigger: ACTTACAAGCCTCCAGTCTCAAATTATCCAGGATAT...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVESSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVEQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCATTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTGCAGTGGCAGTCCCTaGTTTTCGCCTGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVCSGSP*FSPAGF
Trigger: GAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCACATCAGTTAGGTATGTaGCTTTCTTCTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSHQLGM*LSSSSF
Trigger: AAAGGAGGAAGAAGAAAGGCACATACCTAACTGATG...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCCAGGGAAGTCCCTTCTaGGTCCAGATATGGGACGCA +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLQGSPF*VQIWDA
Trigger: TGCGTCCCATATCTGGACCCAGAAGGGACTTCCCTG...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGCAGGGAAGTCCCTTCTaGGTCCAGATATGGGACGCA +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLQGSPF*VQIWDA
Trigger: TGCGTCCCATATCTGGACCCAGAAGGGACTTCCCTG...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCAGGGAAGTCCCTTCTaGGTCCAGATATGGGACGCA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHQGSPF*VQIWDA
Trigger: TGCGTCCCATATCTGGACCCAGAAGGGACTTCCCTG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCATCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTTTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACATTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAGGGAAGTCCCTTCTaGGTCCAGATATGGGACGCA +
Preference number: 4 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLQGSPF*VQIWDA
Trigger: TGCGTCCCATATCTGGACCCAGAAGGGACTTCCCTG...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGATTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGATTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAGACCACTTTACACTCTaGAGCAGCACGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQDHFTL*SSTTPH
Trigger: GTGTGGAGTCGTGCTGCTCCAGAGTGTAAAGTGGTC...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCACTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDHFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGTG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGCACTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILHFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGTG...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR TCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACATTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGTTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 4 (lower is better)
Translates to: FRLLASLKETAWLRDSVEFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACTTCGCACCATGAAGTaGCACTCCTGTTATGGCTGT +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQLRTMK*HSCYGC
Trigger: ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTCACTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVHFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGTG...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVLCWSG*FSLVSG
Trigger: GCCACTTACCAGACTAAATCAACCACTCCAGCAGAG...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR TCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTGTTCACTTCGCACCATaGAGTGGCACTCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVVHFAP*SGTPVM
Trigger: CATAACAGGAGTGCCACTTCATGGTGCGAAGTGAAC...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGGACTCAGTAGAGGGCTaGGATCTGCCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLDSVEG*DLPEYK
Trigger: TTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTC...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAATCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTACAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGCATCAGTTAGGTATGTaGCTTTCTTCTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILHQLGM*LSSSSF
Trigger: AAAGGAGGAAGAAGAAAGGCACATACCTAACTGATG...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGCAGGGACTGCTTaGCCATTTAAAGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLFAGTA*PFKGSR
Trigger: ACGGGATCCTTTAAATGGCCAAGCAGTCCCTGCAAA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTCACTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLHFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGTG...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGGTTTTGTACTAGATaGAGGCAGCACTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTRFCTR*RQHFKT
Trigger: TGTCTTAAAGTGCTGCCTCCATCTAGTACAAAACCT...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322875.8
ENST00000358170.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTCAGCTCCACCATCTaGTTTCCTATGGCAATAACA +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLFSSTI*FPMAIT
Trigger: TGTTATTGCCATAGGAAAGCAGATGGTGGAGCTGAA...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322918.9
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTCTATTCAGCCTCTCTaGTCTGCTGGAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVSIQPL*SAGVVD
Trigger: ATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR GCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGATTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAACAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATTTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGATCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLKTLWN*GIPSTV
Trigger: AACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: CYGCQSPLTSYERMHLILTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCACTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHHFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGTG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000358170.6
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATATATCCTGGATAATTTaGGACTGGAGGCTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDISWII*DWRLVS
Trigger: ACTTACAAGCCTCCAGTCTCAAATTATCCAGGATAT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAATATCCTGGATAATTTaGGACTGGAGGCTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLISWII*DWRLVS
Trigger: ACTTACAAGCCTCCAGTCTCAAATTATCCAGGATAT...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTCACTTTCTAGCTTTCTaGAATCACCGAACACATTAC +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLHFLAF*NHRTHY
Trigger: GTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTG...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTATCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR TCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATTTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLRQLCR*HRGKNP
Trigger: AGGGTTTTTACCTCGATGGCAGCGACACAATTGTCT...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAAGAAGCATCAAAGGATaGTACCTACATTCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQRSIKG*YLHSSH
Trigger: GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCT...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAAATACAGCATATCCCTaGTTTAATACAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRNTAYP*FNTTRH
Trigger: ATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTATTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCAGTGTGATATGAAATaGAGTGGCAGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVQCDMK*SGSPCF
Trigger: AAAGCAGGGACTGCCACTGCATTTCATATCACACTG...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTTCAGCTCCACCATCTaGTTTCCCTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVFSSTI*FPFLLP
Trigger: AGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000360212.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR CCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTACCTTTAAGACACTTTaGAACTGGGGGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVTFKTL*NWGIPS
Trigger: ACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGGT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322918.9
ENST00000357714.5
ENST00000367041.5
CDS-3UTR CCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTGGCAAACCAGGTTGTaGAATCTATTCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVWQTRL*NLFSLS
Trigger: AGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGATATCCTGGATAATTTaGGACTGGAGGCTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLISWII*DWRLVS
Trigger: ACTTACAAGCCTCCAGTCTCAAATTATCCAGGATAT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTCCTCTCACTTCTTATaGAAGGATGCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLSSHFL*KDASDS
Trigger: AGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTTCTTCTTCCTCCTTTaGAGATATCTGTACGGGACA +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVFFFLL*RYLYGT
Trigger: TGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR GCA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTTCTTTGAAAGAAACTaGTTGGCTAAGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLFFERN*LAKGLS
Trigger: ACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAA...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR GCA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 4 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTGCATGCTGTGCTGACTaGTCCAATAAATCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVACCAD*SNKSKC
Trigger: ACACTTAGATTTATTGGACCAGTCAGCACAGCATGC...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATACTTCTTCCATCCCTTaGTACAATCAACAGCAAATA +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDTSSIP*YNQQQI
Trigger: TATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAATGAAGTTACCTTCCTaGGATACATGGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLMKLPS*DTWLTL
Trigger: CAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCAT...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCAACTTTTAACAGTGTaGTATGAAATGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVQLLTV*YEMQWQ
Trigger: CTGCCACTGCATTTCATATCACACTGTTAAAAGTTG...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR TCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAAGAACCTCTATCAGTaGGACTTCTCATTTTATAGC +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLKNLYQ*DFSFYS
Trigger: GCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FPIISSSRQCFFGPICATKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTGACAACACAAATTACTaGAACTCCAACAACTATGGC +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVDNTNY*NSNNYG
Trigger: GCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTC...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR CCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTATCCATTTTCGACTACTaGAAATCGACATTTGACCAC +
Preference number: 4 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLSIFDY*KSTFDH
Trigger: GTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGA...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAAGTCAAAAGATGAACTaGCAAACCAGGTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLSQKMN*QTRLWN
Trigger: ATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACT...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTAACCAGAATTCAGAGTaGGTTACTCAACCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVNQNSE*VTQPKR
Trigger: TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATAGACATATACATAGATaGCTTTTACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHRHIHR*LLLAKA
Trigger: TGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCT...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATGTGTTCTTGTTTTTATaGACAAGAGCCAAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHVFLFL*TRAKVV
Trigger: TACTACTTTGGCTCTTGTGCATAAAAACAAGAACAC...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTCAGCTCCACCATCTaGTTTCCTTTTAATGATAAA +
Preference number: 4 (lower is better)
Translates to: KACETGINFNSVLNSEFLFSSTI*FPFNDK
Trigger: TTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTATACGGAGTTCTCTTTaGGAAAACAACAAGACTACA +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVIRSSL*ENNKTT
Trigger: TGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTAT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CAA 72 bp AGCCAAGTTTGTGCATATTCCCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCCAAAGTAGTATACACA +
Preference number: 4 (lower is better)
Translates to: SQVCAYSQFSVF*FLCTRAKVVYT
Trigger: TGTGTATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
3UTR CAA 72 bp CAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTaGAGGTTATCTGATGAATTTATTCTCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QGNVNGLRFSCD*RLSDEFILFKT
Trigger: GGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR GCA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTAAGAAGCCAAGTTTGTaGATATTCCCAATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: CETGINFNSVLNSEFLFVKKPSL*IFPIFS
Trigger: ACTGAAAATTGGGAATATGCACAAACTTGGCTTCTT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp CCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGGGCTGAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PAGFFERNCLAKGLSRGLNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...CAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTAAACCTTTTCACATATaGGGGGCTTACCGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: VFTSHHEVALLLWLSESSKPFHI*GAYRSK
Trigger: TTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTT...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCATACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: KTTVFTSHHEVALLLWLSYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...TGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: VFTSHHEVALLLWLSESSDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: VFTSHHEVALLLWLSESSFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS TCA 90 bp ACAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTGGTTaGTTTAGTCTGGTAAGTGGCATATTCAGCTCCACCATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TGCGIYSASLLCWSG*FSLVSGIFSSTICF
Trigger: AAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462968.2
CDS-3UTR CAA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGAAACCTTTTCACATATaGGGGGCTTACCGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLKPFHI*GAYRSK
Trigger: TTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTT...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: KCSGSPCFSPAGFFERNCTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...GCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: MNWQTRLWNLFSLSALLETGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CAA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CAA 90 bp ATGAACTGGCAAACCAGGTTGTGGAATCTATTCAGCCTCTCTGCTCTGCTGGAGTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: MNWQTRLWNLFSLSALLEFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...CTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
CDS-3UTR CAA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: FRLLASLKETAWLRDSVETGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGTCAGAGTCCTCTCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: VFTSHHEVALLLWLSESSQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...AGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp ATGAAATGCAGTGGCAGTCCCTGCTTTTCGCCTGCTGGCTTCTTTGAAAGAAACTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: MKCSGSPCFSPAGFFERNFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...GTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCGCCTGCTGGCTTCTTTGAAAGAAACTGCTTGGCTAAGGGACTCAGTAGAGTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: FRLLASLKETAWLRDSVEYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...CTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGACGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: FPIISSSRQCFFGPICATYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AACAAGACTACAGTGTTCACTTCGCACCATGAAGTGGCACTCCTGTTATGGCTGCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: NKTTVFTSHHEVALLLWLQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...CAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTACGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAAAACCTTTTCACATATaGGGGGCTTACCGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRKPFHI*GAYRSK
Trigger: TTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAGTGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: EWVTQPKRTYGVLFGKTTDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...TGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTAAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGTTATGGCTGTCAGAGTCCTCTCACTTCTTATGAAAGGATGCATCTGATTCTGTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: CYGCQSPLTSYERMHLILFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...CAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCCTTGCCAGAGACAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLLARDR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGTCTCTGGCAAG...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462968.2
CDS-3UTR CAA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGT +
Preference number: 5 (lower is better)
Translates to: CETGINFNSVLNSEFLFVYCHRQ*CRCHRG
Trigger: ACCTCGATGGCAGCGACACAATTGTCTGTGACAGTA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGAGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAACTGGCAAACCAGGTaGTGGAATCTATTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: KACETGINFNSVLNSEFLNWQTR*WNLFSL
Trigger: GAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGAGAGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGATTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: GEKNTCNQNSEWVTQPKRFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...TCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGATTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: WVTQPKRTYGVLFGKTTRFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...TCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACGCCTGCTGGCTTCTTaGAAAGAAACTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLRLLAS*KETAWL
Trigger: TAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCG...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGAAACCTTTTCACATATaGGGGGCTTACCGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: KACETGINFNSVLNSEFLKPFHI*GAYRSK
Trigger: TTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTT...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: FPIISSSRQCFFGPICATTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GGGTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GLLNLREHTEFSLGKQQDQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...GTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp CTGCCTGAGTATAAAGTGCTACCTGAGCTATATTTACTTCTTCCATCCCTTGGTCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LPEYKVLPELYLLLPSLGQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...ACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: FPIISSSRQCFFGPICATHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGCTTTAATACAACCAGGCATGCTGTGCTGACTGGTCCAATAAATCTAAGTGTTTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: CFNTTRHAVLTGPINLSVYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...AACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GTTACTCAACCTAAGAGAACATACGGAGTTCTCTTTGGGAAAACAACAAGACTATTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: VTQPKRTYGVLFGKTTRLFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TTTCCAATCATATCTTCCTCAAGGCAATGTTTCTTTGGCCCAATTTGTGCAACTTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: FPIISSSRQCFFGPICATFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...AGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTAAACCTTTTCACATATaGGGGGCTTACCGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: CETGINFNSVLNSEFLFVKPFHI*GAYRSK
Trigger: TTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTT...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp ACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACAAACTGGAAATCGACATTaGACCACTTTACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: TNATHTLSSFLKSPNTLQTGNRH*TTLHSG
Trigger: TCCAGAGTGTAAAGTGGTCAAATGTCGATTTCCAGT...TTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTTAGGAGATCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: EVTFLRYMAYFVLCLLGDQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...ATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGACAAAATGAAGTTACCTTCCTGAGATACATGGCTTACTTTGTACTCTGCCTTTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: RQNEVTFLRYMAYFVLCLYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...AAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGCCAAGGCAATGTAAATGGACTAAGATTCTCATGTGACTTGAGGTTATCTGATTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: SQGNVNGLRFSCDLRLSDYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...ATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAGCATGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: KACETGINFNSVLNSEFLFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...CAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
CDS-3UTR CAA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: CETGINFNSVLNSEFLFVDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTAGATATCCTGGATAATTaGAGACTGGAGGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLDILDN*RLEACK
Trigger: CTTACAAGCCTCCAGTCTCAAATTATCCAGGATATC...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTACATACGGAGTTCTCTTaGGGAAAACAACAAGACTAC +
Preference number: 5 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLHTEFS*GKQQDY
Trigger: GTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATG...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp GAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCTCTACTTCTTCCATCCCTaGGTACAATCAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: ETGINFNSVLNSEFLFVLYFFHP*VQSTAN
Trigger: ATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTA...GAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTTTTGAAAGAAACTGCTaGGCTAAGGGACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: CETGINFNSVLNSEFLFVFERNC*AKGLSR
Trigger: TCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAA...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AAAACAAATGCCACACATACACTTTCTAGCTTTCTGAAATCACCGAACACATTATTTCTTCTTCCTCCTTaGAAGATATCTGTACGGGAC +
Preference number: 5 (lower is better)
Translates to: KTNATHTLSSFLKSPNTLFLLPP*KISVRD
Trigger: GTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAA...TAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp AGAAAAACACATGTAACCAGAATTCAGAGTGGGTTACTCAACCTAAGAGAACATCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RKTHVTRIQSGLLNLREHQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...ATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS-3UTR CAA 90 bp TGTGAAACGGGTATAAACTTCAACTCTGTGCTTAATTCAGAATTCCTGTTTGTTCAATTTTCAGTGTTCTaGTTTTTATGCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: CETGINFNSVLNSEFLFVQFSVF*FLCTRA
Trigger: GGCTCTTGTGCATAAAAACAAGAACACTGAAAATTG...AACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
CDS GCA 72 bp TTAAGTTTCCCGAGGCCTACCCAAACCCCCAGCAGATaGCAGCACCATGCTTCCTGTACAGCTTGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: LSFPRPTQTPSR*QHHASCTACRN
Trigger: GTTTCTACAAGCTGTACAGGAAGCATGGTGCTGGCATCTGCTGGGGGTTTGGGTAGGCCTCGGGAAACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469535.5
CDS CCA 72 bp CGTCCCCTTGGTGCTGTTCTCGTGATACTGAGTGCTTaGGAGATCTGGTTATTTAAAAGTGCGCAACACCTC +
Preference number: 6 (lower is better)
Translates to: RPLGAVLVILSA*EIWLFKSAQHL
Trigger: GAGGTGTTGCGCACTTTTAAATAACCAGATCTCCCAAGCACTCAGTATCACGAGAACAGCACCAAGGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469535.5
CDS CAA 72 bp CTGGGGGATCCCAAGTACTGTTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGTAAAAACCCTTATCGC +
Preference number: 6 (lower is better)
Translates to: LGDPKYCYCHRQ*CRCHRGKNPYR
Trigger: GCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000469535.5
ENST00000480003.5
CDS CAA 90 bp ACTTTGGAACTGGGGGATCCCAAGTACTGTTACTGTCACAGACAATaGTGTCGCTGCCATCGAGGTAAAAACCCTTATCGCATTCAAACA +
Preference number: 6 (lower is better)
Translates to: TLELGDPKYCYCHRQ*CRCHRGKNPYRIQT
Trigger: TGTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000469535.5
ENST00000480003.5
CDS CCA 72 bp GTAAGTAGGCCTAGGACCTTTAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTTACTGTCACAGACAAT +
Preference number: 6 (lower is better)
Translates to: VSRPRTFKTLWN*GIPSTVTVTDN
Trigger: ATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGGTCCTAGGCCTACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322918.9
ENST00000357714.5
ENST00000367041.5
CDS GCA 72 bp CCCAAGTACTGTTACTGTCACAGACAATTGTGTCGCTaGCATCGAGGTAAAAACCCTTATCGCATTCAAACA +
Preference number: 6 (lower is better)
Translates to: PKYCYCHRQLCR*HRGKNPYRIQT
Trigger: TGTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322875.8
ENST00000322918.9
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000469535.5
ENST00000480003.5
CDS CCA 72 bp CTCAGGTTTAGGATATCCTTTAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTTACTGTCACAGACAAT +
Preference number: 6 (lower is better)
Translates to: LRFRISFKTLWN*GIPSTVTVTDN
Trigger: ATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGGATATCCTAAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360212.6
CDS GCA 72 bp CCTTTGAAGATATCTGTACGGGACAACACAAATTACTaGAACTCCAACAACTATGGCAATAACAATCACAGC +
Preference number: 6 (lower is better)
Translates to: PLKISVRDNTNY*NSNNYGNNNHS
Trigger: GCTGTGATTGTTATTGCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000322875.8
ENST00000354848.5
ENST00000357714.5
ENST00000358170.6
ENST00000360212.6
ENST00000367041.5
ENST00000367042.6
ENST00000367047.5
ENST00000462968.2
ENST00000469535.5
ENST00000471987.1
ENST00000480003.5
ENST00000636114.1
CDS CCA 72 bp AAAGATAACCTTTGTACCTTTAAGACACTTTGGAACTaGGGGATCCCAAGTACTGTTACTGTCACAGACAAT +
Preference number: 6 (lower is better)
Translates to: KDNLCTFKTLWN*GIPSTVTVTDN
Trigger: ATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTGTCTTAAAGGTACAAAGGTTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469535.5