RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD44 (Homo sapiens)

Ensembl gene IDs: ENSG00000026508

Ensembl transcript IDs: ENST00000263398.11, ENST00000278385.10, ENST00000278386.10, ENST00000279452.10, ENST00000352818.8, ENST00000415148.6, ENST00000425428.6, ENST00000428726.8, ENST00000433892.6, ENST00000434472.6, ENST00000442151.6, ENST00000524922.1, ENST00000525209.5, ENST00000525211.6, ENST00000525241.1, ENST00000525293.5, ENST00000525348.1, ENST00000525469.1, ENST00000525685.6, ENST00000526000.6, ENST00000526025.2, ENST00000526553.6, ENST00000526669.6, ENST00000527326.1, ENST00000527889.6, ENST00000528086.5, ENST00000528455.5, ENST00000528672.1, ENST00000528922.1, ENST00000531110.6, ENST00000531118.5, ENST00000531141.1, ENST00000531873.5, ENST00000532339.1, ENST00000533222.5, ENST00000534082.1, ENST00000534296.5, ENST00000639002.1

Found 1015 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCATTCAGCTGTGGGAAAGGAGCCTTCCAGTTCTAAGCCCAGCTaGCTGGTCCCAGGCCGCCAGCTTTCCCCAGTGGTCGGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: IHSAVGKEPSSSKPS*LVPGRQLSPVVGCW
Trigger: CCAGCACCCGACCACTGGGGAAAGCTGGCGGCCTGGGACCAGGCAGCTGGGCTTAGAACTGGAAGGCTCCTTTCCCACAGCTGAATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR CCA 90 bp CCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAG +
Preference number: 1 (lower is better)
Translates to: PTPNLSGKQCPGIRL*KGKMDPFKFPPRDQ
Trigger: CTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR TCA 90 bp TGTTCACCAAATGCACCATTTCCTGAGACTTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGTCCTCCACAGCTCCATTGCCACTGT +
Preference number: 1 (lower is better)
Translates to: CSPNAPFPETCWPLR*VHLAFCPPQLHCHC
Trigger: ACAGTGGCAATGGAGCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR TCA 90 bp TCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCGTTGAGTCCACTTGGCTTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: SGVSDDSLFTKCTIS*DLLASPLSPLGFLS
Trigger: GGACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CCA 90 bp CCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGATCAGGAATACATATGTGTAGTTTT +
Preference number: 1 (lower is better)
Translates to: PPRDQALLTLGNVLS*WGKGWRSGIHMCSF
Trigger: AAAACTACACATATGTATTCCTGATCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR CCA 90 bp CCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCAGGAATACATATGTGTAGTTTTTGT +
Preference number: 1 (lower is better)
Translates to: PRDQALLTLGNVLSW*GKGWRSGIHMCSFC
Trigger: ACAAAAACTACACATATGTATTCCTGATCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR TCA 90 bp CCTTTCACAGGAGAGAACAGGTGGCCATTAAACCATAAAAGAGGCTaGAGCTCCTCAGCTTCCAACTCTGATTCCAGGACAGGATGGAAA +
Preference number: 1 (lower is better)
Translates to: PFTGENRWPLNHKRG*SSSASNSDSRTGWK
Trigger: TTTCCATCCTGTCCTGGAATCAGAGTTGGAAGCTGAGGAGCTTCAGCCTCTTTTATGGTTTAATGGCCACCTGTTCTCTCCTGTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 90 bp CAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTaGCAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTTATTTCTA +
Preference number: 1 (lower is better)
Translates to: QAMLQGFVKTWPALR*QWPRNRSSRPPLFL
Trigger: TAGAAATAAGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR GCA 90 bp TTTCTTCTGCCCACACCTTCTTCGACTGTTGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGCCAAGAGGGATGCCAAGATGATCAG +
Preference number: 1 (lower is better)
Translates to: FLLPTPSSTVDCNAN*KNQSQGQEGCQDDQ
Trigger: CTGATCATCTTGGCATCCCTCTTGGCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTGTGGGCAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR TCA 90 bp CAGGTTCCTTGTCTCATCAGCTGTCATAAACTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAAATGCACCATTTCCTGAGACTTGCT +
Preference number: 1 (lower is better)
Translates to: QVPCLISCHKLVWSF*RLLVHQMHHFLRLA
Trigger: AGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGATGAGACAAGGAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CCA 90 bp ATGTCCACATTCTGCAGGTTCCTTGTCTCATCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATT +
Preference number: 1 (lower is better)
Translates to: MSTFCRFLVSSAVIN*SGVSDDSLFTKCTI
Trigger: AATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGATGAGACAAGGAACCTGCAGAATGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR GCA 90 bp TTTAGTAGGAGCCTCAGAAAGGAGATACCATTTAACAGGAGCCGTTaGTTTATAGATGCAATGGCTTCTATGACAAGCAGCCTTTGGAAG +
Preference number: 1 (lower is better)
Translates to: FSRSLRKEIPFNRSR*FIDAMASMTSSLWK
Trigger: CTTCCAAAGGCTGCTTGTCATAGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCTGAGGCTCCTACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 90 bp AATACATCTTATTCCATAAACTTCAGGCAATGTTGCAAGGGTTTGTaGAGACTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAA +
Preference number: 1 (lower is better)
Translates to: NTSYSINFRQCCKGL*RLGQLSVDNGQGIE
Trigger: TTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGAAGTTTATGGAATAAGATGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 90 bp GTAAAAATGACGTGTAGTCAAGCTGTGCTTCCAGAGTTACGCCCTTaGGATCAAGGGAGTGAGAATACATCTTATTCCATAAACTTCAGG +
Preference number: 1 (lower is better)
Translates to: VKMTCSQAVLPELRP*DQGSENTSYSINFR
Trigger: CCTGAAGTTTATGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCACAGCTTGACTACACGTCATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 90 bp CAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTTATTTCTATCGTaGAAACAGAGGTATATCCAAGTGAGGGACTACAACAGTAATAAA +
Preference number: 1 (lower is better)
Translates to: QWPRNRSSRPPLFLS*KQRYIQVRDYNSNK
Trigger: TTTATTACTGTTGTAGTCCCTCACTTGGATATACCTCTGTTTTCACGATAGAAATAAGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 90 bp GCCTTCAAGAATATAAAAACAGCCCATGTGTCAGTTCTAGCGAGGTaGCTGTCTTCATTTAGTTGTTTTCCAAAGGAAAGTTCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: AFKNIKTAHVSVLAR*LSSFSCFPKESSSL
Trigger: CAGAGAAGAACTTTCCTTTGGAAAACAACTAAATGAAGACAGTCACCTCGCTAGAACTGACACATGGGCTGTTTTTATATTCTTGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR CCA 90 bp CTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTaGGCCCTAATTTCAGAAAGCAATGCTGTTTTTACAAATTGGACC +
Preference number: 1 (lower is better)
Translates to: LQVGTGTIKFLLIIN*ALISESNAVFTNWT
Trigger: GGTCCAATTTGTAAAAACAGCATTGCTTTCTGAAATTAGGGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
3UTR-3UTR GCA 90 bp TTCCAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCAAGTTCTAAGCCCAGCTaGCTGGTCCCAGGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: FQPRGPLMASSGFPLYDSSSKPS*LVPGRQ
Trigger: CTGGCGGCCTGGGACCAGGCAGCTGGGCTTAGAACT...TGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR-3UTR TCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: PIQISSQGPGPINPGKCPSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR TCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR TCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTGGCTGAGTGGGTCTaGGTGGGAACTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPLAEWV*VGTQGL
Trigger: GAGACCCTGAGTTCCCACTCAGACCCACTCAGCCAA...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCCTCAGCTTCCAACTCTaGTTCCAGGACAGGATGGAA +
Preference number: 2 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPLSFQL*FQDRME
Trigger: TTCCATCCTGTCCTGGAATCAGAGTTGGAAGCTGAG...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTATGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 2 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR GCA 90 bp GTGCTGTCGGTGATCCAGGGACTGTCTTCGTCTGGGATGGGGTGTACAGTAGAATGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: VLSVIQGLSSSGMGCTVECNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...TTCTACTGTACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGGTCTTCCATGAGATTTaGCTGAGTGGGTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWVFHEI*LSGSEW
Trigger: CCACTCAGACCCACTCAGCCAAATCTCATGGAAGAC...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGGGAACTCAGGGTCTCTaGGATGAAGACTTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWGTQGL*DEDLEE
Trigger: CTCTTCTAAGTCTTCATCTCAGAGACCCTGAGTTCC...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCACTCCTTGGTCTTCCATaGGATTTGGCTGAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPLLGLP*DLAEWV
Trigger: GACCCACTCAGCCAAATCTCATGGAAGACCAAGGAG...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 2 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCCTAGAGGGGGTCTGTTaGAGATGTGTAACTAGTACA +
Preference number: 2 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPLEGVC*RCVTST
Trigger: TGTACTAGTTACACATCTTCAACAGACCCCCTCTAG...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR TCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTACCAATCGGACACCCTaGCTGATGAATAAATGCCAC +
Preference number: 2 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPTNRTP*LMNKCH
Trigger: GTGGCATTTATTCATCAGTCAGGGTGTCCGATTGGT...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 2 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 2 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 2 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR CCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 2 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAATTCTCAGCTCTTCCTaGTACATTGTAGGGACCCAG +
Preference number: 2 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPILSSS*YIVGTQ
Trigger: CTGGGTCCCTACAATGTATCAGGAAGAGCTGAGAAT...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTATGCAATGGCTTCTATaGCAAGCAGCCTTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPMQWLL*QAAFGS
Trigger: ACTTCCAAAGGCTGCTTGTCATAGAAGCCATTGCAT...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR GCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 2 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTLSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 2 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 2 (lower is better)
Translates to: PIQISSQGPGPINPGKCPWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTTGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 2 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CAA 90 bp TTGAGTCCACTTGGCTTTCTGTCCTCCACAGCTCCATTGCCACTGTaGATCACTAGCTTTTTCTTCTGCCCACACCTTCTTCGACTGTTG +
Preference number: 2 (lower is better)
Translates to: LSPLGFLSSTAPLPL*ITSFFFCPHLLRLL
Trigger: CAACAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGCTGTGGAGGACAGAAAGCCAAGTGGACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR TCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTAATGGATCTGGCCAATaGTGTTCACAGAAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPNGSGQ*CSQKRK
Trigger: CTTTCTCTTCTGTGAACATCATTGGCCAGATCCATT...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCATACAGGTTGCAGATTaGCTTGGCCAAATTAATACG +
Preference number: 2 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLIQVAD*LGQINT
Trigger: CGTATTAATTTGGCCAAGTCAATCTGCAACCTGTAT...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR-3UTR GCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAAAACAAAAACAGTGCTaGCCTCCTTGGTCTTCCATG +
Preference number: 2 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLKQKQC*PPWSSM
Trigger: CATGGAAGACCAAGGAGGGCAGCACTGTTTTTGTTT...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 2 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp CCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCCCACACCTTCTTCGACTGAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 2 (lower is better)
Translates to: PLPLLITSFFFCPHLLRLNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp TTTCTGTCCTCCACAGCTCCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 2 (lower is better)
Translates to: FLSSTAPLPLLITSFFFCGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...GCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGCTGTGGAGGACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp CCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCCCACACCTTCTTCGACTGCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 2 (lower is better)
Translates to: PLPLLITSFFFCPHLLRLPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 2 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR TCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTATTGGCTGAGTGGGTCTaGGTGGGAACTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLLAEWV*VGTQGL
Trigger: GAGACCCTGAGTTCCCACTCAGACCCACTCAGCCAA...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp TATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAACCAGTTTCTGCCCTGTGAGGTaGTCTGGGGACACAATAAAG +
Preference number: 2 (lower is better)
Translates to: YGLPMVLELAVGCFPKTSFCPVR*SGDTIK
Trigger: CTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAA...ACTGGTTTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR-3UTR CCA 90 bp ATAAACTGGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATTTCCGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 2 (lower is better)
Translates to: INWSGVSDDSLFTKCTISGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...GGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCGGGTGGAATGTGTCTTaGTCTCTGGTAGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFGWNVS*SLVAGI
Trigger: AATCCCTGCTACCAGAGACCAAGACACATTCCACCC...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR GCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGCCTGGAGTGGCTTGTTaGTTTTCAGTTAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: SGNVARVCEDLASSPLTMPGVAC*FSVKEL
Trigger: AAGCTCTTTAACTGAAAAGCAACAAGCCACTCCAGG...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR GCA 90 bp TCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGAGTTGTCATACAGGTTaGAGATTGACTTGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: SDNDTAASSKPGELCGSRSCHTG*RLTWPN
Trigger: ATTTGGCCAAGTCAATCTGCAACCTGTATGACAACT...CCTGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR-3UTR CCA 90 bp AATGGCCAAGGAATAGAAGCTCTAGACCTCCCTTATTTCTATCGTGAAAACAGAGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 2 (lower is better)
Translates to: NGQGIEALDLPYFYRENRGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...TCTGTTTTCACGATAGAAATAAGGGAGGTCTAGAGCTTCTATTCCTTGGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CCA 90 bp GTTGTTTCTTTCCAAGATAATGGTGTAGGTGTTACACCCCAATCTTCATGTCCAAACCCCCAACCTCAGTaGAAAGCAATGCCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: VVSFQDNGVGVTPQSSCPNPQPQ*KAMPRD
Trigger: ATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTT...TGGACATGAAGATTGGGGTGTAACACCTACACCATTATCTTGGAAAGAAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 2 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR TCA 90 bp ATAAACTGGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATTTCCTCTCCCAGAAGCATCTaGAAAATTTCTAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: INWSGVSDDSLFTKCTISSPRSI*KISRGG
Trigger: ACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGA...GGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR TCA 90 bp ATAAACTGGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATTTCCACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: INWSGVSDDSLFTKCTISTFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...GGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR TCA 90 bp TATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAACCAGTACAGCAAGAAGACGATaGAACAGTGCTCTTCTTATG +
Preference number: 2 (lower is better)
Translates to: YGLPMVLELAVGCFPKTSTARRR*NSALLM
Trigger: CATAAGAAGAGCACTGTTTCATCGTCTTCTTGCTGT...ACTGGTTTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR-3UTR TCA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCAGGTCTTCTCCCAGACTaGGGGGCATTTTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSGLLPD*GAFFCP
Trigger: AGGGCAGAAAAATGCCCCTCAGTCTGGGAGAAGACC...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR-3UTR GCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAGGAAAGTTCTTCTCTaGTTCATAGACCTCCTAACA +
Preference number: 2 (lower is better)
Translates to: LETVWAAHGVGISCWLLSRKVLL*FIDLLT
Trigger: TGTTAGGAGGTCTATGAAGCAGAGAAGAACTTTCCT...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 2 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 2 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTGGAACTCAGGGTCTCTaGGATGAAGACTTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASGTQGL*DEDLEE
Trigger: CTCTTCTAAGTCTTCATCTCAGAGACCCTGAGTTCC...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR GCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAAGACGATGAAACAGTaGTCTTCTTATGCTATAACC +
Preference number: 2 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKKTMKQ*SSYAIT
Trigger: GGTTATAGCATAAGAAGAGCACTGTTTCATCGTCTT...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR CAA 90 bp TTAGCTGACTTTAAACTCCAGTTGTCATACAGGTTGCAGATTGACTaGGCCAAATTAATACGTGGGGTTGACTCCTTAGGCAATAATCCA +
Preference number: 2 (lower is better)
Translates to: LADFKLQLSYRLQID*AKLIRGVDSLGNNP
Trigger: TGGATTATTGCCTAAGGAGTCAACCCCACGTATTAATTTGGCCAAGTCAATCTGCAACCTGTATGACAACTGGAGTTTAAAGTCAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR CAA 90 bp ACAAAGGTGTCTTTAGCTGACTTTAAACTCCAGTTGTCATACAGGTaGCAGATTGACTTGGCCAAATTAATACGTGGGGTTGACTCCTTA +
Preference number: 2 (lower is better)
Translates to: TKVSLADFKLQLSYR*QIDLAKLIRGVDSL
Trigger: TAAGGAGTCAACCCCACGTATTAATTTGGCCAAGTCAATCTGCAACCTGTATGACAACTGGAGTTTAAAGTCAGCTAAAGACACCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR-3UTR CCA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCAAGTTTTTCAAGATTGTaGGGTGAAGTGGAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSSFSRL*GEVEGE
Trigger: CTCTCCCTCCACTTCACCCCACAATCTTGAAAAACT...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR CAA 90 bp CTACATGGCATCATCCTTCCCCTTTGCCAATCTCTTTCATTTCCATaGGCTTCTTCTCTTATTGTAAGACATCAAAAGGCACTTCCATAT +
Preference number: 2 (lower is better)
Translates to: LHGIILPLCQSLSFP*ASSLIVRHQKALPY
Trigger: ATATGGAAGTGCCTTTTGATGTCTTACAATAAGAGAAGAAGCCAATGGAAATGAAAGAGATTGGCAAAGGGGAAGGATGATGCCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR TCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATGGCTTAATATTCCTATaGATTACGTCCTGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYGLIFL*ITSWRK
Trigger: TTTTCTCCAGGACGTAATTCATAGGAATATTAAGCC...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR-3UTR CCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTACAGGAGAGAACAGGTaGCCATTAAACCATAAAAGA +
Preference number: 2 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASTGENR*PLNHKR
Trigger: TCTTTTATGGTTTAATGGCCACCTGTTCTCTCCTGT...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR GCA 72 bp GCTGTGGGAAAGGAGCCTTCCAGTTCTAAGCCCAGCTaGCTGGTCCCAGGCCGCCAGCTTTCCCCAGTGGTC +
Preference number: 3 (lower is better)
Translates to: AVGKEPSSSKPS*LVPGRQLSPVV
Trigger: GACCACTGGGGAAAGCTGGCGGCCTGGGACCAGGCAGCTGGGCTTAGAACTGGAAGGCTCCTTTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR TCA 72 bp CAGTGCTGCCCTCCTTGGTCTTCCATGAGATTTGGCTaGGTGGGTCTGAGTGGGAACTCAGGGTCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: QCCPPWSSMRFG*VGLSGNSGSLR
Trigger: TCTCAGAGACCCTGAGTTCCCACTCAGACCCACTCAGCCAAATCTCATGGAAGACCAAGGAGGGCAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR CCA 72 bp TTCCTGAGACTTGCTGGCCTCTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGCTCCATTGCCACTGTT +
Preference number: 3 (lower is better)
Translates to: FLRLAGLSVEST*LSVLHSSIATV
Trigger: AACAGTGGCAATGGAGCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAAGTCTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR TCA 72 bp TCTGACGACTCCTTGTTCACCAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCGTTGAGTCCACTTGGC +
Preference number: 3 (lower is better)
Translates to: SDDSLFTKCTIS*DLLASPLSPLG
Trigger: GCCAAGTGGACTCAACGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CAA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCAGGTTGCAGATTGACTaGGCCAAATTAATACGTGGG +
Preference number: 3 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLRLQID*AKLIRG
Trigger: CCCACGTATTAATTTGGCCAAGTCAATCTGCAACCT...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR TCA 72 bp TTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTaGCAATGGCCAAGGAATAGAAGCTCTAGACCTCCC +
Preference number: 3 (lower is better)
Translates to: LQGFVKTWPALR*QWPRNRSSRPP
Trigger: GGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR CCA 72 bp GACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGATCAGGAATACATATG +
Preference number: 3 (lower is better)
Translates to: DQALLTLGNVLS*WGKGWRSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR CAA 90 bp TTTCTGTCCTCCACAGCTCCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCGGGGTGGAATGTGTCTaGGTCTCTGGTAGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: FLSSTAPLPLLITSFFFCGVECV*VSGSRD
Trigger: ATCCCTGCTACCAGAGACCAAGACACATTCCACCCC...GCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGCTGTGGAGGACAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR GCA 72 bp CCCACACCTTCTTCGACTGTTGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGCCAAGAGGGATGCCAA +
Preference number: 3 (lower is better)
Translates to: PTPSSTVDCNAN*KNQSQGQEGCQ
Trigger: TTGGCATCCCTCTTGGCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CCA 72 bp CAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCAGGAATACATATGTGT +
Preference number: 3 (lower is better)
Translates to: QALLTLGNVLSW*GKGWRSGIHMC
Trigger: ACACATATGTATTCCTGATCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp ATAAACTGGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAATGCACCATTTCCTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: INWSGVSDDSLFTKCTISLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...GGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CAA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGTTTCTGACGACTCCTaGTTCACCAAATGCACCATT +
Preference number: 3 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLVSDDS*FTKCTI
Trigger: AATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAAC...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CAA 90 bp TTCCAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCAGACTTTAAACTCCAGTaGTCATACAGGTTGCAGATT +
Preference number: 3 (lower is better)
Translates to: FQPRGPLMASSGFPLYDSDFKLQ*SYRLQI
Trigger: AATCTGCAACCTGTATGACAACTGGAGTTTAAAGTC...TGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
3UTR TCA 72 bp GGAGAGAACAGGTGGCCATTAAACCATAAAAGAGGCTaGAGCTCCTCAGCTTCCAACTCTGATTCCAGGACA +
Preference number: 3 (lower is better)
Translates to: GENRWPLNHKRG*SSSASNSDSRT
Trigger: TGTCCTGGAATCAGAGTTGGAAGCTGAGGAGCTTCAGCCTCTTTTATGGTTTAATGGCCACCTGTTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 72 bp AGGGCCCCAGGGATAACAGGTCATGCAAACTTAATGTaGCTTTGCAAAGCCTTTCACAGGAGAGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: RAPGITGHANLM*LCKAFHRREQV
Trigger: CACCTGTTCTCTCCTGTGAAAGGCTTTGCAAAGTCACATTAAGTTTGCATGACCTGTTATCCCTGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 72 bp GCAGCCTTTGGAAGTTCTAGGACCAATCGGACACCCTaGCTGATGAATAAATGCCACAAAGGACTTGCCAAG +
Preference number: 3 (lower is better)
Translates to: AAFGSSRTNRTP*LMNKCHKGLAK
Trigger: CTTGGCAAGTCCTTTGTGGCATTTATTCATCAGTCAGGGTGTCCGATTGGTCCTAGAACTTCCAAAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 72 bp GTGTACAGTAGAAAAGGTGTAAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACTGGAGGAGCCGCTGCT +
Preference number: 3 (lower is better)
Translates to: VYSRKGVKDVTS*SAAPFTGGAAA
Trigger: AGCAGCGGCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTTTACACCTTTTCTACTGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CCA 72 bp AACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCATTCAAATTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: NLSGKQCPGIRL*KGKMDPFKFPP
Trigger: GGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAAAACTTAATGTGACTTaGCAAAGCCTTTCACAGGAG +
Preference number: 3 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPKLNVT*QSLSQE
Trigger: CTCCTGTGAAAGGCTTTGCAAAGTCACATTAAGTTT...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 72 bp CTTATAGGACCAGAGGTTGTGTTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCATCTGATTCAGATCCA +
Preference number: 3 (lower is better)
Translates to: LIGPEVVFAPPS*LPCECPSDSDP
Trigger: TGGATCTGAATCAGATGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTCCTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CAA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
3UTR-3UTR CAA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTACAGTGCTGCCCTCCTaGGTCTTCCATGAGATTTGG +
Preference number: 3 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASTVLPS*VFHEIW
Trigger: CCAAATCTCATGGAAGACCAAGGAGGGCAGCACTGT...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CAA 90 bp GTTGTTTCTTTCCAAGATAATGGTGTAGGTGTTACACCCCAATCTTCATGTCCAGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 3 (lower is better)
Translates to: VVSFQDNGVGVTPQSSCPGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...TGGACATGAAGATTGGGGTGTAACACCTACACCATTATCTTGGAAAGAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR-3UTR CAA 90 bp GGCATTTTTCTGCCCTGTGAGGTGATCTGGGGACACAATAAAGGTGGTCCTGCTAGGTCATTTCCTCTGTaGCTAGAATTACTATTGTGT +
Preference number: 3 (lower is better)
Translates to: GIFLPCEVIWGHNKGGPARSFPL*LELLLC
Trigger: ACACAATAGTAATTCTAGCAACAGAGGAAATGACCT...AGCAGGACCACCTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR TCA 72 bp TATTCCATAAACTTCAGGCAATGTTGCAAGGGTTTGTaGAGACTTGGCCAGCTCTCCGTTGACAATGGCCAA +
Preference number: 3 (lower is better)
Translates to: YSINFRQCCKGL*RLGQLSVDNGQ
Trigger: TTGGCCATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGAAGTTTATGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR TCA 72 bp TGTCTCATCAGCTGTCATAAACTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAAATGCACCATTTCCTG +
Preference number: 3 (lower is better)
Translates to: CLISCHKLVWSF*RLLVHQMHHFL
Trigger: CAGGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGATGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR GCA 72 bp CTTTTTCTTCTGCCCACACCTTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAATCAAAGCCAAGGCCAA +
Preference number: 3 (lower is better)
Translates to: LFLLPTPSSTVD*NANCKNQSQGQ
Trigger: TTGGCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTGTGGGCAGAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR GCA 72 bp TGTAGGTGTTACACCCCAATCTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCAGCTGTCATAAACTGG +
Preference number: 3 (lower is better)
Translates to: CRCYTPIFMSTF*RFLVSSAVINW
Trigger: CCAGTTTATGACAGCTGATGAGACAAGGAACCTGCAGAATGTGGACATGAAGATTGGGGTGTAACACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR CCA 72 bp TTCTGCAGGTTCCTTGTCTCATCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGACTCCTTGTTCACCAAA +
Preference number: 3 (lower is better)
Translates to: FCRFLVSSAVIN*SGVSDDSLFTK
Trigger: TTTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGATGAGACAAGGAACCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
3UTR TCA 72 bp ACGTGTAGTCAAGCTGTGCTTCCAGAGTTACGCCCTTaGGATCAAGGGAGTGAGAATACATCTTATTCCATA +
Preference number: 3 (lower is better)
Translates to: TCSQAVLPELRP*DQGSENTSYSI
Trigger: TATGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCACAGCTTGACTACACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR GCA 72 bp AGCCTCAGAAAGGAGATACCATTTAACAGGAGCCGTTaGTTTATAGATGCAATGGCTTCTATGACAAGCAGC +
Preference number: 3 (lower is better)
Translates to: SLRKEIPFNRSR*FIDAMASMTSS
Trigger: GCTGCTTGTCATAGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCTGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR GCA 72 bp TATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTaGTTTCCAAAAACCAGTAAGGAGTCCATAATTCTC +
Preference number: 3 (lower is better)
Translates to: YGLPMVLELAVG*FPKTSKESIIL
Trigger: GAGAATTATGGACTCCTTACTGGTTTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
3UTR TCA 72 bp AGGAATAGAAGCTCTAGACCTCCCTTATTTCTATCGTaGAAACAGAGGTATATCCAAGTGAGGGACTACAAC +
Preference number: 3 (lower is better)
Translates to: RNRSSRPPLFLS*KQRYIQVRDYN
Trigger: GTTGTAGTCCCTCACTTGGATATACCTCTGTTTTCACGATAGAAATAAGGGAGGTCTAGAGCTTCTATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CAA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGAACGATCAAATTCTaGCTGATTATTAATTGGGCC +
Preference number: 3 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNGTIKF*LIINWA
Trigger: GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
3UTR-3UTR CAA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCACCAGTACTCTCTTGTTaGGTCATAAACTTGCCTATC +
Preference number: 3 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSPVLSC*VINLPI
Trigger: GATAGGCAAGTTTATGACCAAACAAGAGAGTACTGG...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CAA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTAAATGCCACAAAGGACTaGCCAAGTGGGAGAAAATAT +
Preference number: 3 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVNATKD*PSGRKY
Trigger: ATATTTTCTCCCACTTGGCAAGTCCTTTGTGGCATT...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR-3UTR CAA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTACTTCCATATTGTTTTaGGAAATCACTAATAGGGCC +
Preference number: 3 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASTSILF*EITNRA
Trigger: GGCCCTATTAGTGATTTCCAAAAACAATATGGAAGT...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCACAAGTCGCGGGGTGCCTGTaGCTCCGAGCCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: QPRGPLMASSGFPLYDSQVAGCL*LRAPLA
Trigger: GGCCAGTGGGGCTCGGAGGCACAGGCACCCCGCGAC...TTGTGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp CAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCACAAGCCTCCGAGCCCCACTaGCCCCTGCGCCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: QPRGPLMASSGFPLYDSQASEPH*PLRPET
Trigger: CGTCTCTGGGCGCAGGGGCCAGTGGGGCTCGGAGGC...TTGTGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp TTCCAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCATGGAGTGTCGCGGGGTaGCTGTGCCTCCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FQPRGPLMASSGFPLYDSWSVAG*LCLRAP
Trigger: TGGGGCTCGGAGGCACAGGCACCCCGCGACACTCCA...TGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR TCA 90 bp TTCCAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCAGGGTCCGCTGGGCAATaGGGCTGCCTCGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: FQPRGPLMASSGFPLYDSGSAGQ*GCLGSW
Trigger: CCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCC...TGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCGTAAATAATCGGGGCTaGCAGGGACGTGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLVNNRG*QGRGSG
Trigger: CCCCGACCCACGTCCCTGGCAGCCCCGATTATTTAC...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp TCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGGAGGCTGGGGTCCGCTaGGCAATGAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SDNDTAASSKPGELCGSREAGVR*AMRLPR
Trigger: CCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTC...CCTGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp GCTCCTTTCACTGGAGGAGCCGCTGCTCACGTCATCATCAGTAGGGTTGCTGGGAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: APFTGGAAAHVIISRVAGNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...CCCAGCAACCCTACTGATGATGACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR CCA 90 bp TCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGATGGCGGACCGAACCTaGCAGAGGCTGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SDNDTAASSKPGELCGSRMADRT*QRLGSA
Trigger: AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCAT...CCTGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGTGGGTCGGGGAACCTaGAGTGTCGCGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAVGRGT*SVAGCL
Trigger: CAGGCACCCCGCGACACTCCAGGTTCCCCGACCCAC...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGGCTGCCAGGGACGTaGGTCGGGGAACCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAGLPGT*VGEPGV
Trigger: CACTCCAGGTTCCCCGACCCACGTCCCTGGCAGCCC...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp CAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATGATTCACAAGCCAGCTTTCCCCAGTaGTCGGGTGCTGGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: QPRGPLMASSGFPLYDSQASFPQ*SGAGLL
Trigger: TAAGAGACCAGCACCCGACCACTGGGGAAAGCTGGC...TTGTGAATCATAGAGCGGGAACCCAGAGGAAGCCATTAGGGGTCCTCTCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCTGAGGTCACTGGGATaGAGGTCCTGCTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNLRSLG*RSCFPS
Trigger: CGAAGGAAAGCAGGACCTTCATCCCAGTGACCTCAG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPSPQAA*HQNLSM
Trigger: CATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACT...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATGGCGGACCGAACCTaGCAGAGGCTGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIMADRT*QRLGSA
Trigger: AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCAT...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CCA 90 bp GCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTTGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: AMEGQNGPIQISSQGPGPCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...AGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp GCTCCTTTCACTGGAGGAGCCGCTGCTCACGTCATCATCAGTAGGGTTGCTGGGCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: APFTGGAAAHVIISRVAGPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...CCCAGCAACCCTACTGATGATGACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAATGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR TCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR TCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGTTGGCTGAGTGGGTCTaGGTGGGAACTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQLAEWV*VGTQGL
Trigger: GAGACCCTGAGTTCCCACTCAGACCCACTCAGCCAA...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTGTTGCAAGGGTTTGTaGAGACTTGGCCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPCCKGL*RLGQLS
Trigger: GGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACA...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: GPIQISSQGPGPINPGKCAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTATGGCGGACCGAACCTaGCAGAGGCTGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCMADRT*QRLGSA
Trigger: AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCAT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp TTGGCCAAATTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LAKLIRGVDSLGNNPFSCAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...ACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAATTTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCACAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAACTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQLHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGTGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCAGTGCTGCCCTCCTTaGTCTTCCATGAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNQCCPP*SSMRFG
Trigger: GCCAAATCTCATGGAAGACCAAGGAGGGCAGCACTG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTCCAGGAACTGTCCTCTaGGCTTGGTGTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AMEGQNGPIQISSQGPGPPGTVL*AWCCPS
Trigger: GGAAGGACAACACCAAGCCCAGAGGACAGTTCCTGG...AGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR TCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAATGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQWARCY*KPCRGQ
Trigger: CTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCA...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATATGGCTGGTATGAGCTaGGGCTGCAGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNMAGMS*GCSCPC
Trigger: ACAGGGACAGCTGCAGCCTCAGCTCATACCAGCCAT...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR TCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTATTGGATGGCTGGTATaGGCTGAGGCTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PIQISSQGPGPINPGKCPIGWLV*AEAAAV
Trigger: GACAGCTGCAGCCTCAGCTCATACCAGCCATCCAAT...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTCACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNLSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTATGGCGGACCGAACCTaGCAGAGGCTGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGMADRT*QRLGSA
Trigger: AGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCAT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CCA 90 bp GGCATTTTTCTGCCCTGTGAGGTGATCTGGGGACACAATAAAGGTGGTCCTGCTCTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: GIFLPCEVIWGHNKGGPALHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...AGCAGGACCACCTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp GGCATTTTTCTGCCCTGTGAGGTGATCTGGGGACACAATAAAGGTGGTCCTGCTTGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: GIFLPCEVIWGHNKGGPACLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...AGCAGGACCACCTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTATGGCTTGGGTTCCACTaGGTCCAGTCCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLWLGFH*VQSWFC
Trigger: ACAGAACCAGGACTGGACCCAGTGGAACCCAAGCCA...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCGGCTGCCTCGGAAGTTaGCTGCAGTTTTTATTCGAG +
Preference number: 4 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLGCLGS*LQFLFE
Trigger: CTCGAATAAAAACTGCAGCCAACTTCCGAGGCAGCC...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR TCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTGGCTGAGTGGGTCTaGGTGGGAACTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKLAEWV*VGTQGL
Trigger: GAGACCCTGAGTTCCCACTCAGACCCACTCAGCCAA...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGAACCATAAAAGAGGCTaGAGCTCCTCAGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWNHKRG*SSSASN
Trigger: GTTGGAAGCTGAGGAGCTTCAGCCTCTTTTATGGTT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAACCAGAGTTACGCCCTTaGGATCAAGGGAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQPELRP*DQGSEN
Trigger: ATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGG...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGGGACCCAGTCTTAGCTaGGGTCACTGGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMGPSLS*GHWDEG
Trigger: ACCTTCATCCCAGTGACCTCAGCTAAGACTGGGTCC...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTCCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PIQISSQGPGPINPGKCPPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp ACTGGAGGAGCCGCTGCTCACGTCATCATCAGTAGGGTTGCTGGGGTAGATGTCGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TGGAAAHVIISRVAGVDVDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...GACATCTACCCCAGCAACCCTACTGATGATGACGTGAGCAGCGGCTCCTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR GCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAACGTGTAGTCAAGCTGTaGTTCCAGAGTTACGCCCTT +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQRVVKL*FQSYAL
Trigger: AAGGGCGTAACTCTGGAAGCACAGCTTGACTACACG...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGGGTTGCTGTCTCAGTTaGTGTAGCACTAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWGCCLS*CSTSAH
Trigger: ATGAGCACTAGTGCTACAGCAACTGAGACAGCAACC...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAGGACGGGACGAGGATaGCGGACCGAACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGRTGRG*RTEPGR
Trigger: TCTGCCAGGTTCGGTCCGCCATCCTCGTCCCGTCCT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCTGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGAACCCCCAACCTCAGTaGAAAGCAATGCCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMNPQPQ*KAMPRD
Trigger: ATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTT...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGAACCCCCAACCTCAGTaGAAAGCAATGCCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQNPQPQ*KAMPRD
Trigger: ATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTT...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAGTCTTCCATGAGATTTaGCTGAGTGGGTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQVFHEI*LSGSEW
Trigger: CCACTCAGACCCACTCAGCCAAATCTCATGGAAGAC...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCACCAGTGGTCGGGTGCTaGTCTCTTACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAPVVGC*SLTCRS
Trigger: AGACCTGCAGGTAAGAGACCAGCACCCGACCACTGG...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR TCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPWARCY*KPCRGQ
Trigger: CTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGGTGTAAAAGATGTAACCTCCTGAAGTGCTGCTCCTTTCACTGGAGGAGCCGCGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RCKRCNLLKCCSFHWRSRGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...GCGGCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTTTACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCTAGAGGGGGTCTGTTaGAGATGTGTAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWLEGVC*RCVTST
Trigger: TGTACTAGTTACACATCTTCAACAGACCCCCTCTAG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACAGAAATCCAGACCACTaGAAATGGATCTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNRNPDH*KWIWPM
Trigger: CATTGGCCAGATCCATTTTCAGTGGTCTGGATTTCT...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTTGGCCAGCTCTCCGTTaGCAATGGCCAAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLWPALR*QWPRNR
Trigger: TCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCA...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGCTGCGTTGTCATTaGAAGAGGTCCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTLLRCH*KRSCPV
Trigger: GACAGGACAGGACCTCTTTCAATGACAACGCAGCAG...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGTTGAGCCTTCAGAATaGTTTGGGTCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNVEPSE*FGSLLP
Trigger: TGGAAGAAGAGACCCAAATCATTCTGAAGGCTCAAC...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGCATTTTTCTGCCCTGTGAGGTGATCTGGGGACACAATAAAGGTGGTCCTGCTTTCTGCCCTGTGAGGTaGTCTGGGGACACAATAAAG +
Preference number: 4 (lower is better)
Translates to: GIFLPCEVIWGHNKGGPAFCPVR*SGDTIK
Trigger: CTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAA...AGCAGGACCACCTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCGGTCTTCTCCCAGACTaGGGGGCATTTTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSGLLPD*GAFFCP
Trigger: AGGGCAGAAAAATGCCCCTCAGTCTGGGAGAAGACC...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCTGGGTTCCCGCTCTATaGTTCACAAAGGTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLWVPAL*FTKVSL
Trigger: TAAAGACACCTTTGTGAATCATAGAGCGGGAACCCA...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATCGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQLSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAACCTCATGCCATCTGTTaGCAAACCACTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQPHAIC*QTTVPS
Trigger: AGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGG...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp GCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATCCATCCTTCTTCCTaGTTGATGACCTCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AMEGQNGPIQISSQGPGPIHPSS*LMTSSH
Trigger: ATGGGACGAGGTCATCAAGCAGGAAGAAGGATGGAT...AGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCGGGCGAAAGGAGCTaGAGGATCCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPAGERS*RIPGRG
Trigger: CCCGCGCCCAGGGATCCTCCAGCTCCTTTCGCCCGC...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTCTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCLHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAATGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGGTGGAATGTGTCTTaGTCTCTGGTAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQGWNVS*SLVAGI
Trigger: AATCCCTGCTACCAGAGACCAAGACACATTCCACCC...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000425428.6
CDS-3UTR CCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTACTGTCCTCTGGGCTTaGTGTTGTCCTTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PIQISSQGPGPINPGKCPTVLWA*CCPSLH
Trigger: ATGCAAGGAAGGACAACACCAAGCCCAGAGGACAGT...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGCCTTCAGAATGATTTaGGTCTCTTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNAFRMI*VSSSTC
Trigger: ACAGGTGGAAGAAGAGACCCAAATCATTCTGAAGGC...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
3UTR CAA 72 bp TCCCTGGGGCGACAGGTAGAGGCTGTTGTAACCATTTaGAACCTTGTCCTGGAGTGGCTTGTTGCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SLGRQVEAVVTI*NLVLEWLVAFQ
Trigger: CTGAAAAGCAACAAGCCACTCCAGGACAAGGTTCAAAATGGTTACAACAGCCTCTACCTGTCGCCCCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWACLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTTTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQTFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: MEGQNGPIQISSQGPGPILVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR TCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR TCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGAACTCAGGGTCTCTaGGATGAAGACTTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLGTQGL*DEDLEE
Trigger: CTCTTCTAAGTCTTCATCTCAGAGACCCTGAGTTCC...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTAGAAATCCAGACCACTaGAAATGGATCTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: AMEGQNGPIQISSQGPGPRNPDH*KWIWPM
Trigger: CATTGGCCAGATCCATTTTCAGTGGTCTGGATTTCT...AGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGAGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAACCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTCCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAACACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGACCTGTGTTTGGATTTaGAGTAGGCTGAAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWTCVWI*SRLKRY
Trigger: ATAACGCTTCAGCCTACTGCAAATCCAAACACAGGT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TTGGCCAAATTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTTCTGCCCCCGCCCCGTaGTCTGCTGAGGCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: LAKLIRGVDSLGNNPFSCSAPAP*SAEAVN
Trigger: ATTTACAGCCTCAGCAGAGCACGGGGCGGGGGCAGA...ACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAATTTGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp TCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGTGCTGGTCTCTTACCTaGAGGTCTCAAATCCGATGC +
Preference number: 4 (lower is better)
Translates to: SDNDTAASSKPGELCGSRCWSLT*RSQIRC
Trigger: GCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCA...CCTGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp TTGGCCAAATTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTTCCCCAGTGGTCGGGTaGTGGTCTCTTACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAKLIRGVDSLGNNPFSCSPVVG*WSLTCR
Trigger: CCTGCAGGTAAGAGACCAGCACCCGACCACTGGGGA...ACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAATTTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCCAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCCTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWALHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTAACCCCCAACCTCAGTaGAAAGCAATGCCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLINPQPQ*KAMPRD
Trigger: ATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTT...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAAGTTTTTCAAGATTGTaGGGTGAAGTGGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQSFSRL*GEVEGE
Trigger: CTCTCCCTCCACTTCACCCCACAATCTTGAAAAACT...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATACTTCCGGATTTGAATaGCTTGGGTTCCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNTSGFE*LGFHWV
Trigger: GACCCAGTGGAACCCAAGCCATTCAAATCCGGAAGT...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCCCCACACCTGGAATTTaGGGTGTCCTTATAGGACCA +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTPTPGI*GVLIGP
Trigger: TGGTCCTATAAGGACACCCCAAATTCCAGGTGTGGG...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525469.1
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCCCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTCCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAAGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCTGTGCTGTCGGTaGTCCAGGGACTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPCLCCR*SRDCLR
Trigger: ACGAAGACAGTCCCTGGATCACCGACAGCACAGACA...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GPIQISSQGPGPINPGKCRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GGCATTTTTCTGCCCTGTGAGGTGATCTGGGGACACAATAAAGGTGGTCCTGCTAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GIFLPCEVIWGHNKGGPARGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...AGCAGGACCACCTTTATTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCACTAGAGGGGGTCTGTTaGAGATGTGTAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPLEGVC*RCVTST
Trigger: TGTACTAGTTACACATCTTCAACAGACCCCCTCTAG...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTGTTAAAGAGCTTGAGTaGGCCTGTCTGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGVKELE*ACLGLW
Trigger: CCAGAGGCCCAGACAGGCTCACTCAAGCTCTTTAAC...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAACCATCTCTGGCTATaGGACTTGTATCACTACCCC +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMNHLWL*DLYHYP
Trigger: GGGGTAGTGATACAAGTCTCATAGCCAGAGATGGTT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCCAATTCTACCAGGCTTaGAATATGGATTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPQFYQA*NMDSKM
Trigger: CATCTTCGAATCCATATTTCAAGCCTGGTAGAATTG...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAGATGTAGAGAAGCTCTaGGAATTACTCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPDVEKL*ELLCCV
Trigger: AACGCAGCAGAGTAATTCTCAGAGCTTCTCTACATC...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATATGGCTGGTATGAGCTaGGGCTGCAGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYMAGMS*GCSCPC
Trigger: ACAGGGACAGCTGCAGCCTCAGCTCATACCAGCCAT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCTGAGGTCACTGGGATaGAGGTCCTGCTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFLRSLG*RSCFPS
Trigger: CGAAGGAAAGCAGGACCTTCATCCCAGTGACCTCAG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCCTGAGGTCACTGGGATaGAGGTCCTGCTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPLRSLG*RSCFPS
Trigger: CGAAGGAAAGCAGGACCTTCATCCCAGTGACCTCAG...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTGGACCCAGTCTTAGCTaGGGTCACTGGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGGPSLS*GHWDEG
Trigger: ACCTTCATCCCAGTGACCTCAGCTAAGACTGGGTCC...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFSPQAA*HQNLSM
Trigger: CATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACT...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGSPQAA*HQNLSM
Trigger: CATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGCACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp GGCCTTCAAGAATATAAAAACAGCCCATGTGTCAGTTCTAGCGAGGTGACTGTCCGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: GLQEYKNSPCVSSSEVTVRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...GACAGTCACCTCGCTAGAACTGACACATGGGCTGTTTTTATATTCTTGAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAACCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp CCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCCCACACCTTCTTCGACTGTGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLPLLITSFFFCPHLLRLCNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR GCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAACAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GPIQISSQGPGPINPGKCDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: GPIQISSQGPGPINPGKCTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCAGTTGTCATACAGGTTaGAGATTGACTTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLSCHTG*RLTWPN
Trigger: ATTTGGCCAAGTCAATCTGCAACCTGTATGACAACT...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATCAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRLHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCCTGCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSLHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGCAG...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTTGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWASVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGTCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMSAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTACCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLINVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTCTGAGTGGGTCTGAGTaGGAACTCAGGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGLSGSE*ELRVSE
Trigger: CTCAGAGACCCTGAGTTCCCACTCAGACCCACTCAG...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCTGAGTGGGTCTGAGTaGGAACTCAGGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFLSGSE*ELRVSE
Trigger: CTCAGAGACCCTGAGTTCCCACTCAGACCCACTCAG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTGACCCAGGAAATCTCTaGGAAAACAAGAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLDPGNL*ENKRHL
Trigger: CAAGTGCCTCTTGTTTTCCCAGAGATTTCCTGGGTC...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTACACCAAACCTGTGTTTaGATTTGCAGTAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLHQTCV*ICSRLK
Trigger: CTTCAGCCTACTGCAAATCCAAACACAGGTTTGGTG...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACTGGCTTGGGTTCCACTaGGTCCAGTCCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNWLGFH*VQSWFC
Trigger: ACAGAACCAGGACTGGACCCAGTGGAACCCAAGCCA...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCTCCACAGATGGAGTTaGGGTGGATCCGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDLHRWS*GGSGES
Trigger: TGATTCCCCGGATCCACCCCAACTCCATCTGTGGAG...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526669.6
3UTR CAA 72 bp CTTGGCTTTCTGTCCTCCACAGCTCCATTGCCACTGTaGATCACTAGCTTTTTCTTCTGCCCACACCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGFLSSTAPLPL*ITSFFFCPHLL
Trigger: AAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGCTGTGGAGGACAGAAAGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPWARCY*KPCRGQ
Trigger: CTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCA...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFWARCY*KPCRGQ
Trigger: CTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCA...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTGGGAGGTGTTGGATGTaGGGATGTACACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVGRCWM*GCTPLC
Trigger: ACACAGGGGTGTACATCCTCACATCCAACACCTCCC...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp TTTCTTCTGCCCACACCTTCTTCGACTGTTGACTGCAATGCAAACTGCAAGAATAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FLLPTPSSTVDCNANCKNKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTGTGGGCAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATCTAGAGGGGGTCTGTTaGAGATGTGTAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNLEGVC*RCVTST
Trigger: TGTACTAGTTACACATCTTCAACAGACCCCCTCTAG...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTTCTCCCAGAAGCATCTaGAAAATTTCTAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: MEGQNGPIQISSQGPGPISPRSI*KISRGG
Trigger: ACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGA...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCCTCCTTGGTCTTCCATaGGATTTGGCTGAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSLLGLP*DLAEWV
Trigger: GACCCACTCAGCCAAATCTCATGGAAGACCAAGGAG...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACCTCCTTGGTCTTCCATaGGATTTGGCTGAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNLLGLP*DLAEWV
Trigger: GACCCACTCAGCCAAATCTCATGGAAGACCAAGGAG...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCATGCAATGGCTTCTATaGCAAGCAGCCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTMQWLL*QAAFGS
Trigger: ACTTCCAAAGGCTGCTTGTCATAGAAGCCATTGCAT...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCCCCTTATTTCTATCGTaGAAACAGAGGTATATCCAA +
Preference number: 4 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPPLFLS*KQRYIQ
Trigger: TTGGATATACCTCTGTTTTCACGATAGAAATAAGGG...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGGCCAGCTCTCCGTTaGCAATGGCCAAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPWPALR*QWPRNR
Trigger: TCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCA...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTGCAAGGGTTTGTaGAGACTTGGCCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGCCKGL*RLGQLS
Trigger: GGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACA...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTCTGCTGCGTTGTCATTaGAAGAGGTCCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGLLRCH*KRSCPV
Trigger: GACAGGACAGGACCTCTTTCAATGACAACGCAGCAG...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTGGTGTGAGATTGGGTTaGAGAAATCAGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCGVRLG*RNQSRN
Trigger: GTTCCTGGACTGATTTCTTCAACCCAATCTCACACC...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGGACCCAGTCTTAGCTaGGGTCACTGGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYGPSLS*GHWDEG
Trigger: ACCTTCATCCCAGTGACCTCAGCTAAGACTGGGTCC...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAACATTTTTCTGCCCTGTaGGGTGATCTGGGGACACAA +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKHFSAL*GDLGTQ
Trigger: TTGTGTCCCCAGATCACCTCACAGGGCAGAAAAATG...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFSPQAA*HQNLSM
Trigger: CATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACT...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNAESPG*VPPKLV
Trigger: GACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp TTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTGGGAAAGGAATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LIRGVDSLGNNPFSCGKGIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...TCCTTTCCCACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTCACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCAAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TTTCTGTCCTCCACAGCTCCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: FLSSTAPLPLLITSFFFCTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...GCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGCTGTGGAGGACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR GCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR GCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGCCTGGAGTGGCTTGTTaGTTTTCAGTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQPGVAC*FSVKEL
Trigger: AAGCTCTTTAACTGAAAAGCAACAAGCCACTCCAGG...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTATGTACTACTAGGAGTTaGCTGGATTGTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLCTTRS*LDCACR
Trigger: TCTACAAGCACAATCCAGGCAACTCCTAGTAGTACA...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGCCTCGGAAGTTGGCTaGAGTTTTTATTCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAASEVG*SFYSRL
Trigger: CAACCTCGAATAAAAACTGCAGCCAACTTCCGAGGC...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCATGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATTGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAGGGTGGAATGTGTCTTaGTCTCTGGTAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKGWNVS*SLVAGI
Trigger: AATCCCTGCTACCAGAGACCAAGACACATTCCACCC...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPSAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCTCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTSAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTTCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: MEGQNGPIQISSQGPGPISAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAACCCCCAACCTCAGTaGAAAGCAATGCCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGNPQPQ*KAMPRD
Trigger: ATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAAAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGATTCCAGGACAGGATaGAAAACCTTTGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNDSRTG*KTFGQC
Trigger: ACACTGTCCAAAGGTTTTCCATCCTGTCCTGGAATC...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTGATTCCAGGACAGGATaGAAAACCTTTGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLDSRTG*KTFGQC
Trigger: ACACTGTCCAAAGGTTTTCCATCCTGTCCTGGAATC...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCCAAACAGGATCTACATaGCATCATCCTTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTQTGST*HHPSPL
Trigger: CAAAGGGGAAGGATGATGCCATGTAGATCCTGTTTG...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATCACCAAACCTGTGTTTaGATTTGCAGTAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNHQTCV*ICSRLK
Trigger: CTTCAGCCTACTGCAAATCCAAACACAGGTTTGGTG...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCCTTGCATTGGATGGCTaGTATGAGCTGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPLALDG*YELRLQ
Trigger: CTGCAGCCTCAGCTCATACCAGCCATCCAATGCAAG...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTCCACGTGCCCTTCTATaGACCCATACCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGPRALL*THTCRS
Trigger: AGACCTGCAGGTATGGGTTCATAGAAGGGCACGTGG...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTTTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTTGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTAGCACACCCGAGGGATaGAAGGCCTCCAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGSTPEG*KASKWE
Trigger: TTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCT...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR TCA 90 bp CCATTGCCACTGTTGATCACTAGCTTTTTCTTCTGCCCACACCTTCTTCGACTGTCTCCCAGAAGCATCTaGAAAATTTCTAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PLPLLITSFFFCPHLLRLSPRSI*KISRGG
Trigger: ACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGA...CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGTGATCAACAGTGGCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTTCTCCCAGAAGCATCTaGAAAATTTCTAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCSPRSI*KISRGG
Trigger: ACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGA...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCAACCATAAAAGAGGCTaGAGCTCCTCAGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFNHKRG*SSSASN
Trigger: GTTGGAAGCTGAGGAGCTTCAGCCTCTTTTATGGTT...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAATGGATCTGGCCAATaGTGTTCACAGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLNGSGQ*CSQKRK
Trigger: CTTTCTCTTCTGTGAACATCATTGGCCAGATCCATT...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTCCAGAGTTACGCCCTTaGGATCAAGGGAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGPELRP*DQGSEN
Trigger: ATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGG...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTATGTACAGCACAAGAATaGACAATGGGCTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLCTAQE*TMGYSL
Trigger: CAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACA...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAGCCCGTGGTGTGGTTaGAATGGTGCTGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIISPWCG*NGAGDK
Trigger: TTTATCTCCAGCACCATTTCAACCACACCACGGGCT...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR TCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATATTGGATGGCTGGTATaGGCTGAGGCTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNIGWLV*AEAAAV
Trigger: GACAGCTGCAGCCTCAGCTCATACCAGCCATCCAAT...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCTCGTCCCATGGGGTGTaGGATTGGGTTGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSSSHGV*DWVEEI
Trigger: GATTTCTTCAACCCAATCTCACACCCCATGGGACGA...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTCTGAGGTCACTGGGATaGAGGTCCTGCTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGLRSLG*RSCFPS
Trigger: CGAAGGAAAGCAGGACCTTCATCCCAGTGACCTCAG...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp GTTCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: VLTMILQLLQSQESSVEAHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCACGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATCCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCACCCTGTGTTGTTTGCTaGACAGATGGAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPPCVVC*TDGVGV
Trigger: CACCCCAACTCCATCTGTGCAGCAAACAACACAGGG...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTTGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFCNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR GCA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIILSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR GCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGLSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR GCA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTATCCTAAATAGCAACTaGATCAAGAACAGACACTGG +
Preference number: 4 (lower is better)
Translates to: PIQISSQGPGPINPGKCPILNSN*IKNRHW
Trigger: CCAGTGTCTGTTCTTGATGCAGTTGCTATTTAGGAT...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGATGCCACAAAGGACTTaGCAAGTGGGAGAAAATATG +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMMPQRT*QVGENM
Trigger: CATATTTTCTCCCACTTGGCAAGTCCTTTGTGGCAT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGCCGTTGCTTTATAGATaGAATGGCTTCTATGACAAG +
Preference number: 4 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMPLLYR*NGFYDK
Trigger: CTTGTCATAGAAGCCATTGCATCTATAAAGCAACGG...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCACCTGGAGTGGCTTGTTaGTTTTCAGTTAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPPGVAC*FSVKEL
Trigger: AAGCTCTTTAACTGAAAAGCAACAAGCCACTCCAGG...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCACCTGTGTTTGGATTTaGAGTAGGCTGAAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTTCVWI*SRLKRY
Trigger: ATAACGCTTCAGCCTACTGCAAATCCAAACACAGGT...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCACCAGAGGTTGTGTTTaGTCCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFTRGCV*STDGVG
Trigger: CCCAACTCCATCTGTGGAGCAAACACAACCTCTGGT...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526669.6
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTACAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTCAGATGGAGTTGGGGTaGATCCGGGGAATCACCACG +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGQMELG*IRGITT
Trigger: CGTGGTGATTCCCCGGATCCACCCCAACTCCATCTG...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTATGCTGCTCCTTTCACTaGAGGAGCCGCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVCCSFH*RSRCSR
Trigger: ACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGCAGCA...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAGGAAATGTCCTTAGCTaGTGGGGGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPGNVLS*WGKGWR
Trigger: TCGCCAACCTTTCCCCCACCAGCTAAGGACATTTCC...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGACAGGAGAGAACAGGTaGCCATTAAACCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMTGENR*PLNHKR
Trigger: TCTTTTATGGTTTAATGGCCACCTGTTCTCTCCTGT...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCGACCCAGGAAATCTCTaGGAAAACAAGAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWADPGNL*ENKRHL
Trigger: CAAGTGCCTCTTGTTTTCCCAGAGATTTCCTGGGTC...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGAACCTTGTCCTGGAGTaGCTTGTTGCTTTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMNLVLE*LVAFQL
Trigger: TAACTGAAAAGCAACAAGCCACTCCAGGACAAGGTT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTGTCTCAGCCTCTTTTTaGGAATATCTAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIVSASF*EYLEGV
Trigger: CACTCCTTCTAGATATTCCCAAAAAGAGGCTGAGAC...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCGTCTCAGCCTCTTTTTaGGAATATCTAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTVSASF*EYLEGV
Trigger: CACTCCTTCTAGATATTCCCAAAAAGAGGCTGAGAC...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCCAAAAGCCCGTGGTGTaGTTGAAATGGTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSQKPVV*LKWCWR
Trigger: TCTCCAGCACCATTTCAACCACACCACGGGCTTTTG...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACACTGGGTCCAGTCCTaGTTCTGTTTTGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRHWVQS*FCFVWS
Trigger: TGACCACACAAAACAGAACCAGGACTGGACCCAGTG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCSSLGV*RYPSCH
Trigger: ATGGCATGAGGGATATCGCCAAACACCCAAAGAAGA...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428726.8
3UTR CAA 72 bp CCCAGGGATAACAGGTCATGCAAACTTAATGTGACTTaGCAAAGCCTTTCACAGGAGAGAACAGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PRDNRSCKLNVT*QSLSQERTGGH
Trigger: ATGGCCACCTGTTCTCTCCTGTGAAAGGCTTTGCAAAGTCACATTAAGTTTGCATGACCTGTTATCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTGTGGAGCTGAAGCATTaGAGCAATATGTGTCATACT +
Preference number: 4 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIVELKH*SNMCHT
Trigger: AGTATGACACATATTGCTTCAATGCTTCAGCTCCAC...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWARGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWATFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFTFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCTCTCCCAGAAGCATCTaGAAAATTTCTAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWASPRSI*KISRGG
Trigger: ACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGA...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACATTCTCAGCTCTTCCTaGTACATTGTAGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNILSSS*YIVGTQ
Trigger: CTGGGTCCCTACAATGTATCAGGAAGAGCTGAGAAT...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAAGTTTAGGTAACAAATaGCTTTTAGTAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPSLGNK*LLVGAS
Trigger: TGAGGCTCCTACTAAAAGTCATTTGTTACCTAAACT...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTGTTAAAGAGCTTGAGTaGGCCTGTCTGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGVKELE*ACLGLW
Trigger: CCAGAGGCCCAGACAGGCTCACTCAAGCTCTTTAAC...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCAAACCATCTCTGGCTATaGGACTTGTATCACTACCCC +
Preference number: 4 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPNHLWL*DLYHYP
Trigger: GGGGTAGTGATACAAGTCTCATAGCCAGAGATGGTT...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAAGAGGTATATCCAAGTaGGGGACTACAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPRGISK*GTTTVI
Trigger: TATTACTGTTGTAGTCCCTCACTTGGATATACCTCT...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCAATTCTACCAGGCTTaGAATATGGATTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTQFYQA*NMDSKM
Trigger: CATCTTCGAATCCATATTTCAAGCCTGGTAGAATTG...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATCTGCTGCGTTGTCATTaGAAGAGGTCCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNLLRCH*KRSCPV
Trigger: GACAGGACAGGACCTCTTTCAATGACAACGCAGCAG...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTAGCCCGTGGTGTGGTTaGAATGGTGCTGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVSPWCG*NGAGDK
Trigger: TTTATCTCCAGCACCATTTCAACCACACCACGGGCT...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCGGTGTGAGATTGGGTTaGAGAAATCAGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSGVRLG*RNQSRN
Trigger: GTTCCTGGACTGATTTCTTCAACCCAATCTCACACC...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTTCGTCCCATGGGGTGTaGGATTGGGTTGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFSSHGV*DWVEEI
Trigger: GATTTCTTCAACCCAATCTCACACCCCATGGGACGA...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCGTTGAGCCTTCAGAATaGTTTGGGTCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAVEPSE*FGSLLP
Trigger: TGGAAGAAGAGACCCAAATCATTCTGAAGGCTCAAC...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGACCCAGTCTTAGCTaGGGTCACTGGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVGPSLS*GHWDEG
Trigger: ACCTTCATCCCAGTGACCTCAGCTAAGACTGGGTCC...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAACTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKNFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGTT...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAACAGCAAGAAGACGATaGAACAGTGCTCTTCTTATG +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKTARRR*NSALLM
Trigger: CATAAGAAGAGCACTGTTTCATCGTCTTCTTGCTGT...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTCGGGGAATCACCACGTaGCCTTCTATGAACCCATAC +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASRGITT*PSMNPY
Trigger: GTATGGGTTCATAGAAGGGCACGTGGTGATTCCCCG...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYCNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR GCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR GCA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGATCCTAAATAGCAACTaGATCAAGAACAGACACTGG +
Preference number: 4 (lower is better)
Translates to: SGNVARVCEDLASSPLTMILNSN*IKNRHW
Trigger: CCAGTGTCTGTTCTTGATGCAGTTGCTATTTAGGAT...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAAATGCCACAAAGGACTTaGCAAGTGGGAGAAAATATG +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKMPQRT*QVGENM
Trigger: CATATTTTCTCCCACTTGGCAAGTCCTTTGTGGCAT...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATAATGAGGGGAGGGTGTaGTTCTGGGTTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNNEGRV*FWVPVS
Trigger: GGAAACTGGAACCCAGAAGCACACCCTCCCCTCATT...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTATCTCCAACAGTAACTaGAGTAACTCCAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCISNSN*SNSKGP
Trigger: GGGTCCTTTGGAGTTACTGCAGTTACTGTTGGAGAT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTACTAGCTTTTTCTTCTaGCCACACCTGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCTSFFF*PHLEFG
Trigger: CCCAAATTCCAGGTGTGGGCAGAAGAAAAAGCTAGT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525469.1
CDS-3UTR CCA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCATGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTATGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTTCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCACAGGAGAGAACAGGTaGCCATTAAACCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: GLGYGRAKWTHSNFLPGTTGENR*PLNHKR
Trigger: TCTTTTATGGTTTAATGGCCACCTGTTCTCTCCTGT...GGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCAGTTTTTCAAGATTGTaGGGTGAAGTGGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWASFSRL*GEVEGE
Trigger: CTCTCCCTCCACTTCACCCCACAATCTTGAAAAACT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGCAGAGTAGAAGTTGTTaGATGGTCTTTATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQQSRSC*MVFIFF
Trigger: GAAGAAGATAAAGACCATCCAACAACTTCTACTCTG...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTGGGAGGGTGTGCTTCTaGGTTCCAGTTTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFGRVCF*VPVSFI
Trigger: TATGAAGGAAACTGGAACCCAGAAGCACACCCTCCC...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCGTCCCTGTTGTCGAATaGGAGTCTTCTTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSVPVVE*ESSLGV
Trigger: AACACCCAAAGAAGACTCCCATTCGACAACAGGGAC...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTGTCCCTGTTGTCGAATaGGAGTCTTCTTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFVPVVE*ESSLGV
Trigger: AACACCCAAAGAAGACTCCCATTCGACAACAGGGAC...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATACTGTCCTCTGGGCTTaGTGTTGTCCTTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYTVLWA*CCPSLH
Trigger: ATGCAAGGAAGGACAACACCAAGCCCAGAGGACAGT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTCCAGGAACTGTCCTCTaGGCTTGGTGTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGPGTVL*AWCCPS
Trigger: GGAAGGACAACACCAAGCCCAGAGGACAGTTCCTGG...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTGCCTTCAGAATGATTTaGGTCTCTTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCAFRMI*VSSSTC
Trigger: ACAGGTGGAAGAAGAGACCCAAATCATTCTGAAGGC...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCGCCTTCAGAATGATTTaGGTCTCTTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAAFRMI*VSSSTC
Trigger: ACAGGTGGAAGAAGAGACCCAAATCATTCTGAAGGC...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGGTGGAATGTGTCTTaGTCTCCTGATAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNGWNVS*SPDKER
Trigger: TCGTTCCTTATCAGGAGACCAAGACACATTCCACCC...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATCCCTGTGAGGTGATCTaGGGACACAATAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYPCEVI*GHNKGG
Trigger: ACCACCTTTATTGTGTCCCCAGATCACCTCACAGGG...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCTTCTGCCCACACCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRSSAHT*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGGTGTGGGCAGAAGA...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525469.1
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTATGTTTGCTCCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGGAGCAAACA...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526669.6
CDS-3UTR TCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTTGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGWARCY*KPCRGQ
Trigger: CTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCA...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp AATGGCCAAGGAATAGAAGCTCTAGACCTCCCTTATTTCTATCGTGAAAACAGAGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NGQGIEALDLPYFYRENRGQVCD*CTIFFR
Trigger: CCTGAAGAAGATTGTACATCAGTCACAGACCTGCCC...TCTGTTTTCACGATAGAAATAAGGGAGGTCTAGAGCTTCTATTCCTTGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIIRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGTFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATGCTGGCCTCTCCGTTaGGTCCACTTGGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPCWPLR*VHLAFC
Trigger: ACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAAAATGCACCATTTCCTaGGACTTGCTGGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVKCTIS*DLLASP
Trigger: CGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTT...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTCTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTTTCTGCTTTGTGGTCTaGGAAGCATTGCCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIIFCFVV*EALPVK
Trigger: CTTAACAGGCAATGCTTCTCAGACCACAAAGCAGAA...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAAAGAGGTATATCCAAGTaGGGGACTACAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKRGISK*GTTTVI
Trigger: TATTACTGTTGTAGTCCCTCACTTGGATATACCTCT...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATTGAGATCAAGGGAGTaGGAATACATCTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPLRSRE*EYILFH
Trigger: ATGGAATAAGATGTATTCTCACTCCCTTGATCTCAA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTGATGTAGAGAAGCTCTaGGAATTACTCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGDVEKL*ELLCCV
Trigger: AACGCAGCAGAGTAATTCTCAGAGCTTCTCTACATC...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGAATCCTTGTGGTTGTCTaGAGTAGCACTTCCGGATTT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRILVVV*SSTSGF
Trigger: AAATCCGGAAGTGCTACTTCAGACAACCACAAGGAT...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCGTTGAGCCTTCAGAATaGTTTGGGTCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPVEPSE*FGSLLP
Trigger: TGGAAGAAGAGACCCAAATCATTCTGAAGGCTCAAC...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPSPQAA*HQNLSM
Trigger: CATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACT...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTATATTCAAATCGATCTaGGCCAGGCTCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGIFKSI*ARLSGT
Trigger: CGTGCCGCTGAGCCTGGCGCAGATCGATTTGAATAT...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCCACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTCCTCCGTCCGAGAGATaGTGTAGCGACCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGPPSER*CSDHFS
Trigger: AGAAAAATGGTCGCTACAGCATCTCTCGGACGGAGG...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTGGGAAAGGAAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LIRGVDSLGNNPFSCGKGRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...TCCTTTCCCACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR GCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTCACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATCAAGGCCAAGAGGGATaGCAAGATGATCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNQGQEG*QDDQPF
Trigger: GAATGGCTGATCATCTTGGCATCCCTCTTGGCCTTG...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp GAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAATCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ETVWAAHGVGISCWLLSKSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...TTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGAACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR GCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTCTCAGTGGAAAGCAATaGCCAGGGATTAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASLSGKQ*PGIRLW
Trigger: CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAAACAAAAACAGTGCTaGCCTCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDKQKQC*PPWSSM
Trigger: CATGGAAGACCAAGGAGGGCAGCACTGTTTTTGTTT...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp TCACCCTTTGGGTGTCTCCCAGAAGCATCTGAAAAATTTCTAGAGGGGGTCTGTTTTAACAGGAGCCGTTaGTTTATAGATGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SPFGCLPEASEKFLEGVCFNRSR*FIDAMA
Trigger: AGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAA...ACAGACCCCCTCTAGAAATTTTTCAGATGCTTCTGGGAGACACCCAAAGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATTTCTTCAGGTGGAGCTaGAGGTCTCAAATCCGATGC +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNFFRWS*RSQIRC
Trigger: GCATCGGATTTGAGACCTGCAGCTCCACCTGAAGAA...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATGTTTGCTGCACAGATaGAGTTGGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPCLLHR*SWGGSG
Trigger: CCCGGATCCACCCCAACTCCATCTGTGCAGCAAACA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGACAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTGGGACTGTCTTCGTCTaGGATGGGGTGTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGGTVFV*DGVYSR
Trigger: TCTACTGTACACCCCATCCCAGACGAAGACAGTCCC...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTGGGTGGAATGTGTCTTaGTCTCTGGTAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASGWNVS*SLVAGI
Trigger: AATCCCTGCTACCAGAGACCAAGACACATTCCACCC...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263398.11
CDS-3UTR CCA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTTCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIISAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGSAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATCCAGGGATTAGGCTATaGAAGGGCAAAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNPGIRL*KGKMDP
Trigger: TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGG...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGTCTTCCATGAGATTTaGCTGAGTGGGTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNVFHEI*LSGSEW
Trigger: CCACTCAGACCCACTCAGCCAAATCTCATGGAAGAC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTCAGTGCTGCCCTCCTTaGTCTTCCATGAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGQCCPP*SSMRFG
Trigger: GCCAAATCTCATGGAAGACCAAGGAGGGCAGCACTG...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCAAACAGGATCTACATaGCATCATCCTTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFQTGST*HHPSPL
Trigger: CAAAGGGGAAGGATGATGCCATGTAGATCCTGTTTG...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCAACCTTGTCCTGGAGTaGCTTGTTGCTTTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWANLVLE*LVAFQL
Trigger: TAACTGAAAAGCAACAAGCCACTCCAGGACAAGGTT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATCAAAAGCCCGTGGTGTaGTTGAAATGGTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNQKPVV*LKWCWR
Trigger: TCTCCAGCACCATTTCAACCACACCACGGGCTTTTG...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATCACTGGGTCCAGTCCTaGTTCTGTTTTGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNHWVQS*FCFVWS
Trigger: TGACCACACAAAACAGAACCAGGACTGGACCCAGTG...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATACTTCCGGATTTGAATaGCTTGGGTTCCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNTSGFE*LGFHWV
Trigger: GACCCAGTGGAACCCAAGCCATTCAAATCCGGAAGT...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTGCTTGTAGAATGTaGGGTCTCTTCTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPCACRM*GLFFLM
Trigger: CATGAGGAAGAAGAGACCCCACATTCTACAAGCACA...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACCACTGTTCCTTCTaGGTAGCTGTTTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSNHCSF*VAVSSV
Trigger: AACGGAAGAAACAGCTACCCAGAAGGAACAGTGGTT...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCACAATCTTCTTCAGGTaGAGCTGCAGGTCTCAAATC +
Preference number: 4 (lower is better)
Translates to: SSTLHLLSVPAPCNGYVSTIFFR*SCRSQI
Trigger: GATTTGAGACCTGCAGCTCCACCTGAAGAAGATTGT...GGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR TCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGTGGAGCTGAAGCATTaGAGCAATATGTGTCATACT +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNVELKH*SNMCHT
Trigger: AGTATGACACATATTGCTTCAATGCTTCAGCTCCAC...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGTGGAGCTGAAGCATTaGAGCAATATGTGTCATACT +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDVELKH*SNMCHT
Trigger: AGTATGACACATATTGCTTCAATGCTTCAGCTCCAC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATACCTTCTTCGACTGTTaGCTGCAATGCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYTFFDC*LQCKLQ
Trigger: TTGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR TCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTACTGGTCTGGAGTTTCTaGCGACTCCTTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVLVWSF*RLLVHQ
Trigger: TTGGTGAACAAGGAGTCGTCAGAAACTCCAGACCAG...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR TCA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCATCACAGCACAAAAGGTaGAGATCGAAGAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPSQHKR*RSKKYR
Trigger: TCTGTACTTCTTCGATCTTCACCTTTTGTGCTGTGA...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTCACAGCACAAAAGGTaGAGATCGAAGAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFSQHKR*RSKKYR
Trigger: TCTGTACTTCTTCGATCTTCACCTTTTGTGCTGTGA...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTATTCTCAGCTCTTCCTaGTACATTGTAGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASILSSS*YIVGTQ
Trigger: CTGGGTCCCTACAATGTATCAGGAAGAGCTGAGAAT...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTACCAATCGGACACCCTaGCTGATGAATAAATGCCAC +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGTNRTP*LMNKCH
Trigger: GTGGCATTTATTCATCAGTCAGGGTGTCCGATTGGT...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATATGCAATGGCTTCTATaGCAAGCAGCCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYMQWLL*QAAFGS
Trigger: ACTTCCAAAGGCTGCTTGTCATAGAAGCCATTGCAT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYRSQIR*SELSPS
Trigger: AGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCT...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCACACCCCTGTGTTGTTTaGTGCACAGATGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPHPCVV*CTDGVG
Trigger: CCCAACTCCATCTGTGCAGCAAACAACACAGGGGTG...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCAAACCTCCTGAAGTGCTaGTCCTTTCACTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSNLLKC*SFHWRS
Trigger: GCTCCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTT...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVCNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCAACCAGAGGTTGTGTTTaGTCCACCTTCTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSTRGCV*STFLTP
Trigger: GGGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGT...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAGACTGCAATGCAAACTaGAAGAATCAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPDCNAN*KNQSQG
Trigger: GCCTTGGCTTTGATTCTTGCAGTTTGCATTGCAGTC...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: HLLSVPAPCNGYVSNGCFFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...GAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR GCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTACGTGTAGTCAAGCTGTaGTTCCAGAGTTACGCCCTT +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVRVVKL*FQSYAL
Trigger: AAGGGCGTAACTCTGGAAGCACAGCTTGACTACACG...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCTTCATAAGCAGTGGTaGCATTTCTGTCTACATCAG +
Preference number: 4 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDLHKQW*HFCLHQ
Trigger: CTGATGTAGACAGAAATGGCACCACTGCTTATGAAG...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAAATGAGGGGAGGGTGTaGTTCTGGGTTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPNEGRV*FWVPVS
Trigger: GGAAACTGGAACCCAGAAGCACACCCTCCCCTCATT...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTCCTCATGCCATCTGTTaGCAAACCACTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGPHAIC*QTTVPS
Trigger: AGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGG...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATATCCATCCTTCTTCCTaGTTGATGACCTCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNIHPSS*LMTSSH
Trigger: ATGGGACGAGGTCATCAAGCAGGAAGAAGGATGGAT...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATATCTCCAACAGTAACTaGAGTAACTCCAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYISNSN*SNSKGP
Trigger: GGGTCCTTTGGAGTTACTGCAGTTACTGTTGGAGAT...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTATCTCCAACAGTAACTaGAGTAACTCCAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFISNSN*SNSKGP
Trigger: GGGTCCTTTGGAGTTACTGCAGTTACTGTTGGAGAT...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTATTCTTGCCTCTTGGTTaGTGTCTCAGTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLFLPLG*CLSCCS
Trigger: GCTACAGCAACTGAGACAGCAACCAAGAGGCAAGAA...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAGACGATGAAACAGTaGTCTTCTTATGCTATAACC +
Preference number: 4 (lower is better)
Translates to: LETVWAAHGVGISCWLLSKTMKQ*SSYAIT
Trigger: GGTTATAGCATAAGAAGAGCACTGTTTCATCGTCTT...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAAGGAAAGTTCTTCTCTaGTTCATAGACCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKRKVLL*FIDLLT
Trigger: TGTTAGGAGGTCTATGAAGCAGAGAAGAACTTTCCT...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVQYVSY*EVLDVR
Trigger: CCTCACATCCAACACCTCCCAGTATGACACATATTG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATCCGTTGAGTCCACTTaGCTTTCTGTCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPSVEST*LSVLHS
Trigger: GCTGTGGAGGACAGAAAGCCAAGTGGACTCAACGGA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCATCAGCTGTCATAAACTaGTCTGGAGTTTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPSAVIN*SGVSDD
Trigger: GTCGTCAGAAACTCCAGACCAGTTTATGACAGCTGA...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTTGGTGGGGGAAAGGTTaGCGATCAGGAATACATATG +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGWWGKG*RSGIHM
Trigger: CATATGTATTCCTGATCGCCAACCTTTCCCCCACCA...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAAATGTCCTTAGCTGGTaGGGGAAAGGTTGGCGATCA +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVNVLSW*GKGWRS
Trigger: TGATCGCCAACCTTTCCCCCACCAGCTAAGGACATT...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTAAATAGCTTCACCCTTTaGGTGTCTCCCAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLNSFTL*VSPRSI
Trigger: GATGCTTCTGGGAGACACCCAAAGGGTGAAGCTATT...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTCTTCCATATTGTTTTTaGAAATCACTAATAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLLPYCF*KSLIGP
Trigger: TGGCCCTATTAGTGATTTCCAAAAACAATATGGAAG...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCACTTCCATATTGTTTTTaGAAATCACTAATAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPLPYCF*KSLIGP
Trigger: TGGCCCTATTAGTGATTTCCAAAAACAATATGGAAG...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTAGGGAGGGTGTGCTTCTaGGTTCCAGTTTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVGRVCF*VPVSFI
Trigger: TATGAAGGAAACTGGAACCCAGAAGCACACCCTCCC...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFSSLGV*RYPSCH
Trigger: ATGGCATGAGGGATATCGCCAAACACCCAAAGAAGA...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCACTTGCATTGGATGGCTaGTATGAGCTGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPLALDG*YELRLQ
Trigger: CTGCAGCCTCAGCTCATACCAGCCATCCAATGCAAG...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGCGTTATACTATGACTaGAGTCCATATCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNALYYD*SPYPSF
Trigger: GAAGGATGGATATGGACTCCAGTCATAGTATAACGC...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAGCCTTCAGAATGATTTaGGTCTCTTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPAFRMI*VSSSTC
Trigger: ACAGGTGGAAGAAGAGACCCAAATCATTCTGAAGGC...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGGTGGAATGTGTCTTaGTCTCCTGATAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNGWNVS*SPDKER
Trigger: TCGTTCCTTATCAGGAGACCAAGACACATTCCACCC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAGTTGGAATTAGCTGTTaGTTGCTTTCCAAAAACCAG +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKVGISC*LLSKNQ
Trigger: CTGGTTTTTGGAAAGCAACCAACAGCTAATTCCAAC...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCATTTGCTCCACCTTCTTaGCTCCCATGTGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSFAPPS*LPCECP
Trigger: TGGACACTCACATGGGAGTCAAGAAGGTGGAGCAAA...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCACATGCAAACTTAATGTaGCTTTGCAAAGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPHANLM*LCKAFH
Trigger: GTGAAAGGCTTTGCAAAGTCACATTAAGTTTGCATG...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCAGGAAGGGTGTGCTCTaGAAAGTCAAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: IRNETISSTLHLLSVPAPRKGVL*KVKVTI
Trigger: TATTGTTACTTTGACTTTTCAGAGCACACCCTTCCT...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGATGTAGAGAAGCTCTaGGAATTACTCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGDVEKL*ELLCCV
Trigger: AACGCAGCAGAGTAATTCTCAGAGCTTCTCTACATC...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTATCATTCCTATTGCTTaGTGTCAGAGTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RNETISSTLHLLSVPAPCIIPIA*CQSRSC
Trigger: ACAACTTCTACTCTGACATCAAGCAATAGGAATGAT...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCATCATTCCTATTGCTTaGTGTCAGAGTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GLQVGTGTIKFLLIINWAIIPIA*CQSRSC
Trigger: ACAACTTCTACTCTGACATCAAGCAATAGGAATGAT...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCATCATTCCTATTGCTTaGTGTCAGAGTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFIIPIA*CQSRSC
Trigger: ACAACTTCTACTCTGACATCAAGCAATAGGAATGAT...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTGTTGAGCCTTCAGAATaGTTTGGGTCTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASVEPSE*FGSLLP
Trigger: TGGAAGAAGAGACCCAAATCATTCTGAAGGCTCAAC...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR TCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAATCTTATGCTATAACCTaGATCTCTTCAACTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKSYAIT*ISSTSS
Trigger: CGAAGAAGTTGAAGAGATTCAGGTTATAGCATAAGA...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp TATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAACCAGTGGCTTAATATTCCTATaGATTACGTCCTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: YGLPMVLELAVGCFPKTSGLIFL*ITSWRK
Trigger: TTTTCTCCAGGACGTAATTCATAGGAATATTAAGCC...ACTGGTTTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATCACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATGTAACCTCCTGAAGTaGTGCTCCTTTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPCNLLK*CSFHWR
Trigger: CCTCCAGTGAAAGGAGCAGCACTTCAGGAGGTTACA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCATTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR GCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATAAACAAAAACAGTGCTaGCCTCCTTGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNKQKQC*PPWSSM
Trigger: CATGGAAGACCAAGGAGGGCAGCACTGTTTTTGTTT...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCAAAAACAGTGCTCTTCTTATaGTATAACCTGAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLYGLPMVLELAVGCFPKTVLFL*YNLNLF
Trigger: GAAGAGATTCAGGTTATAGCATAAGAAGAGCACTGT...TTTTGGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATCACCAAACCTGTGTTTaGATTTGCAGTAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NETISSTLHLLSVPAPCNHQTCV*ICSRLK
Trigger: CTTCAGCCTACTGCAAATCCAAACACAGGTTTGGTG...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCATGGTTCTGTTTTGTGTaGTCAAAAGCCCGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSWFCFV*SKARGV
Trigger: CACACCACGGGCTTTTGACCACACAAAACAGAACCA...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCATCAGTCATCCTTGTaGTTGTCTGAAGTAGCACTT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVHQSSL*LSEVAL
Trigger: AAGTGCTACTTCAGACAACCACAAGGATGACTGATG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCTACTAGGAGTTGCCTaGATTGTGCTTGTAGAATGT +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVLLGVA*IVLVEC
Trigger: ACATTCTACAAGCACAATCCAGGCAACTCCTAGTAG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCTACTAGGAGTTGCCTaGATTGTGCTTGTAGAATGT +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFLLGVA*IVLVEC
Trigger: ACATTCTACAAGCACAATCCAGGCAACTCCTAGTAG...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGGTGGAATGTGTCTTaGTCTCCTGATAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVGWNVS*SPDKER
Trigger: TCGTTCCTTATCAGGAGACCAAGACACATTCCACCC...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CAGTGGTCATTGTACAGCACAAGAATGAACAATGGGCTATTCTTTGAAAACTCAAGAGGGATGCCAAGATaGTCAGCCATTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: QWSLYSTRMNNGLFFENSRGMPR*SAILEF
Trigger: AAATTCCAGAATGGCTGATCATCTTGGCATCCCTCT...TGAGTTTTCAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACAATGACCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTCATGCAAACTTAATGTaGCTTTGCAAAGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVHANLM*LCKAFH
Trigger: GTGAAAGGCTTTGCAAAGTCACATTAAGTTTGCATG...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp ACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTAGTTTAGGTAACAAATaGCTTTTAGTAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLHLLSVPAPCNGYVSNGSLGNK*LLVGAS
Trigger: TGAGGCTCCTACTAAAAGTCATTTGTTACCTAAACT...ACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATTCTGCTTTGTGGTCTaGGAAGCATTGCCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVFCFVV*EALPVK
Trigger: CTTAACAGGCAATGCTTCTCAGACCACAAAGCAGAA...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCACCCTTATTTCTATCGTaGAAACAGAGGTATATCCAA +
Preference number: 4 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPPLFLS*KQRYIQ
Trigger: TTGGATATACCTCTGTTTTCACGATAGAAATAAGGG...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAACTAGCTTTTTCTTCTaGCCACACCTTCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVTSFFF*PHLLRL
Trigger: CAGTCGAAGAAGGTGTGGGCAGAAGAAAAAGCTAGT...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR GCA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCGTTGCTTTATAGATaGAATGGCTTCTATGACAAG +
Preference number: 4 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFPLLYR*NGFYDK
Trigger: CTTGTCATAGAAGCCATTGCATCTATAAAGCAACGG...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AGAAAGGAGATACCATTTAACAGGAGCCGTTGCTTTATAGATGCAATGGCTTCTCTTCATAAGCAGTGGTaGCATTTCTGTCTACATCAG +
Preference number: 4 (lower is better)
Translates to: RKEIPFNRSRCFIDAMASLHKQW*HFCLHQ
Trigger: CTGATGTAGACAGAAATGGCACCACTGCTTATGAAG...AGAAGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAATGGTATCTCCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR GCA 90 bp CAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTTGTACTACTAGGAGTTaGCTGGATTGTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QLPVMVMFPTVVSFQDNGCTTRS*LDCACR
Trigger: TCTACAAGCACAATCCAGGCAACTCCTAGTAGTACA...ACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR GCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTATCTCCAACAGTAACTaGAGTAACTCCAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGISNSN*SNSKGP
Trigger: GGGTCCTTTGGAGTTACTGCAGTTACTGTTGGAGAT...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTACCTCCAAGTGGGAACTaGAACGATCAAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVPPSGN*NDQILA
Trigger: AGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGG...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
CDS-3UTR CCA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACCAGAGTAGAAGTTGTTaGATGGTCTTTATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNQSRSC*MVFIFF
Trigger: GAAGAAGATAAAGACCATCCAACAACTTCTACTCTG...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATGGTTCTGTTTTGTGTaGTCAAAAGCCCGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPWFCFV*SKARGV
Trigger: CACACCACGGGCTTTTGACCACACAAAACAGAACCA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTAACCACTGTTCCTTCTaGGTAGCTGTTTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGNHCSF*VAVSSV
Trigger: AACGGAAGAAACAGCTACCCAGAAGGAACAGTGGTT...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCT +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGNGSLL*VFGDIP
Trigger: AGGGATATCGCCAAACACCCAAAGAAGACTCCCATT...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGGGTGGAATGTGTCTTaGTCTCCTGATAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPGWNVS*SPDKER
Trigger: TCGTTCCTTATCAGGAGACCAAGACACATTCCACCC...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGTGGAGCTGAAGCATTaGAGCAATATGTGTCATACT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVVELKH*SNMCHT
Trigger: AGTATGACACATATTGCTTCAATGCTTCAGCTCCAC...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCACATTGGGCAGGTCTGTaGCTGATGTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPHWAGL*LMYNLL
Trigger: AAGAAGATTGTACATCAGTCACAGACCTGCCCAATG...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR TCA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCAAAAGATGTAACCTCCTaGAGTGCTGCTCCTTTCACT +
Preference number: 4 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSKDVTS*SAAPFT
Trigger: AGTGAAAGGAGCAGCACTTCAGGAGGTTACATCTTT...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCACTAGAGGGGGTCTGTTaGAGATGTGTAACTAGTACA +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPLEGVC*RCVTST
Trigger: TGTACTAGTTACACATCTTCAACAGACCCCCTCTAG...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR TCA 90 bp TTTTTGGGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTAAATGGATCTGGCCAATaGTGTTCACAGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLGISRRSGKPSLAMRLVNGSGQ*CSQKRK
Trigger: CTTTCTCTTCTGTGAACATCATTGGCCAGATCCATT...TACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATTGTACAGCACAAGAATaGACAATGGGCTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNCTAQE*TMGYSL
Trigger: CAAAGAATAGCCCATTGTTCATTCTTGTGCTGTACA...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR TCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTAAGGAAGGGTGTGCTCTaGAAAGTCAAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLRKGVL*KVKVTI
Trigger: TATTGTTACTTTGACTTTTCAGAGCACACCCTTCCT...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCACACGTGGAATACACCTaGAAAGCGGCAGGTTATATT +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPHVEYT*KAAGYI
Trigger: AATATAACCTGCCGCTTTGCAGGTGTATTCCACGTG...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp TCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SQLPVMVMFPTVVSFQDNSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...ATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR GCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTTTCATGTCCACATTCTaGAGGTTCCTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGFMSTF*RFLVSS
Trigger: TGATGAGACAAGGAACCTGCAGAATGTGGACATGAA...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR GCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTATTTAACAGGAGCCGTTaGTTTATAGATGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLFNRSR*FIDAMA
Trigger: AGCCATTGCATCTATAAAGCAACGGCTCCTGTTAAA...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAACCTGTGTTTGGATTTaGAGTAGGCTGAAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVTCVWI*SRLKRY
Trigger: ATAACGCTTCAGCCTACTGCAAATCCAAACACAGGT...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTGATGATCAGCCATTCTaGAATTTGGGGTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGDDQPF*NLGCPY
Trigger: ATAAGGACACCCCAAATTCCAGAATGGCTGATCATC...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp TTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCACAGAGTAGAAGTTGTTaGATGGTCTTTATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCNGYVSNGCFFPQSRSC*MVFIFF
Trigger: GAAGAAGATAAAGACCATCCAACAACTTCTACTCTG...TGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CCA 90 bp CTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTACATCAGTCATCCTTGTaGTTGTCTGAAGTAGCACTT +
Preference number: 4 (lower is better)
Translates to: LPVMVMFPTVVSFQDNGVHQSSL*LSEVAL
Trigger: AAGTGCTACTTCAGACAACCACAAGGATGACTGATG...TACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCATGTGCTTGTAGAATGTaGGGTCTCTTCTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPCACRM*GLFFLM
Trigger: CATGAGGAAGAAGAGACCCCACATTCTACAAGCACA...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCT +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPNGSLL*VFGDIP
Trigger: AGGGATATCGCCAAACACCCAAAGAAGACTCCCATT...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR TCA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCAGTGGAGCTGAAGCATTaGAGCAATATGTGTCATACT +
Preference number: 4 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSVELKH*SNMCHT
Trigger: AGTATGACACATATTGCTTCAATGCTTCAGCTCCAC...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR TCA 90 bp GGAATATCTAGAAGGAGTGGAAAACCATCTCTGGCTATGAGACTTGTATCACTATTGAGATCAAGGGAGTaGGAATACATCTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: GISRRSGKPSLAMRLVSLLRSRE*EYILFH
Trigger: ATGGAATAAGATGTATTCTCACTCCCTTGATCTCAA...TAGTGATACAAGTCTCATAGCCAGAGATGGTTTTCCACTCCTTCTAGATATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR GCA 90 bp CCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATAATGGTGTAGGTTCTTCGACTGTTGACTaGAATGCAAACTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: PVMVMFPTVVSFQDNGVGSSTVD*NANCKN
Trigger: ATTCTTGCAGTTTGCATTGCAGTCAACAGTCGAAGA...ACCTACACCATTATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CCA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCGTTATACTATGACTaGAGTCCATATCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: KKIRNETISSTLHLLSVPALYYD*SPYPSF
Trigger: GAAGGATGGATATGGACTCCAGTCATAGTATAACGC...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
3UTR CAA 72 bp GGAAAGGTTCTGCTAGAAAAGCCAATTCTACCAGGCTaGAAATATGGATTCGAAGATGTCTTTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GKVLLEKPILPG*KYGFEDVFCLF
Trigger: AAAGAGACAAAAGACATCTTCGAATCCATATTTCAAGCCTGGTAGAATTGGCTTTTCTAGCAGAACCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR CAA 72 bp ATGTTTCCTCTCTCCTACTCCTCTGATATAACAGTATaGAATGAATGTTGGCTACAAAATCAATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: MFPLSYSSDITV*NECWLQNQFLV
Trigger: CACCAAGAATTGATTTTGTAGCCAACATTCATTCAATACTGTTATATCAGAGGAGTAGGAGAGAGGAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
3UTR CAA 72 bp TATTGTAAGACATCAAAAGGCACTTCCATATTGTTTTaGGAAATCACTAATAGGGCCAGCCTCTATGAAATA +
Preference number: 4 (lower is better)
Translates to: YCKTSKGTSILF*EITNRASLYEI
Trigger: TATTTCATAGAGGCTGGCCCTATTAGTGATTTCCAAAAACAATATGGAAGTGCCTTTTGATGTCTTACAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS GCA 90 bp ATCTGCGCCAGGCTCAGCGGCACGAGGCAGAGTCCCCAGGCTGCGTaGCACCAAAACTTGTCCATGGTGTCCGGAGCGAACGGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: ICARLSGTRQSPQAA*HQNLSMVSGANGGR
Trigger: GCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525211.6
ENST00000526025.2
ENST00000526669.6
ENST00000528086.5
CDS CCA 90 bp GCACGAGGCAGAGTCCCCAGGCTGCGTGCCACCAAAACTTGTCCATaGTGTCCGGAGCGAACGGAGGGCGCGGGCGAAAGGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ARGRVPRLRATKTCP*CPERTEGAGERSWR
Trigger: CCTCCAGCTCCTTTCGCCCGCGCCCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526025.2
ENST00000526669.6
ENST00000528086.5
CDS GCA 90 bp ATCGATCTGCGCCAGGCTCAGCGGCACGAGGCAGAGTCCCCAGGCTaGGTGCCACCAAAACTTGTCCATGGTGTCCGGAGCGAACGGAGG +
Preference number: 5 (lower is better)
Translates to: IDLRQAQRHEAESPG*VPPKLVHGVRSERR
Trigger: CCTCCGTTCGCTCCGGACACCATGGACAAGTTTTGGTGGCACGCAGCCTGGGGACTCTGCCTCGTGCCGCTGAGCCTGGCGCAGATCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525211.6
ENST00000526025.2
ENST00000526669.6
ENST00000528086.5
CDS GCA 90 bp CCCAGCTGCCTGGTCCCAGGCCGCCAGCTTTCCCCAGTGGTCGGGTaGTGGTCTCTTACCTGCAGGTCTCAAATCCGATGCTCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: PSCLVPGRQLSPVVG*WSLTCRSQIRCSEL
Trigger: AAGCTCTGAGCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCACCCGACCACTGGGGAAAGCTGGCGGCCTGGGACCAGGCAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS CCA 90 bp CGGGACGAGGATGGCGGACCGAACCTGGCAGAGGCTGGGGTCCGCTaGGCAATGAGGCTGCCTCGGAAGTTGGCTGCAGTTTTTATTCGA +
Preference number: 5 (lower is better)
Translates to: RDEDGGPNLAEAGVR*AMRLPRKLAAVFIR
Trigger: TCGAATAAAAACTGCAGCCAACTTCCGAGGCAGCCTCATTGCCCAGCGGACCCCAGCCTCTGCCAGGTTCGGTCCGCCATCCTCGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS CCA 90 bp GTTCTAAGCCCAGCTGCCTGGTCCCAGGCCGCCAGCTTTCCCCAGTaGTCGGGTGCTGGTCTCTTACCTGCAGGTCTCAAATCCGATGCT +
Preference number: 5 (lower is better)
Translates to: VLSPAAWSQAASFPQ*SGAGLLPAGLKSDA
Trigger: AGCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCACCCGACCACTGGGGAAAGCTGGCGGCCTGGGACCAGGCAGCTGGGCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS GCA 90 bp CCAGGCCGCCAGCTTTCCCCAGTGGTCGGGTGCTGGTCTCTTACCTaGAGGTCTCAAATCCGATGCTCAGAGCTTTCTCCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PGRQLSPVVGCWSLT*RSQIRCSELSPSGP
Trigger: TGGCCCAGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCACCCGACCACTGGGGAAAGCTGGCGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS CCA 90 bp AGCTGCCTGGTCCCAGGCCGCCAGCTTTCCCCAGTGGTCGGGTGCTaGTCTCTTACCTGCAGGTCTCAAATCCGATGCTCAGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: SCLVPGRQLSPVVGC*SLTCRSQIRCSELS
Trigger: AGAAAGCTCTGAGCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCACCCGACCACTGGGGAAAGCTGGCGGCCTGGGACCAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CAA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCGCGTGCCACCAAAACTaGTCCATGGTGTCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPACHQN*SMVSGA
Trigger: CGCTCCGGACACCATGGACAAGTTTTGGTGGCACGC...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp GCTCCTTTCACTGGAGGAGCCGCTGCTCACGTCATCATCAGTAGGGTTGCTGGGGGGGTGGAATGTGTCTaGGTCTCTGGTAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: APFTGGAAAHVIISRVAGGVECV*VSGSRD
Trigger: ATCCCTGCTACCAGAGACCAAGACACATTCCACCCC...CCCAGCAACCCTACTGATGATGACGTGAGCAGCGGCTCCTCCAGTGAAAGGAGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS TCA 90 bp TGCTCAGAGCTTTCTCCATCTGGGCCATTGTGGGCAAGGTGCTATTaGAAGCCTTGCAGAGGTCAGCGGCCTCCGTCCGAGAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: CSELSPSGPLWARCY*KPCRGQRPPSERCC
Trigger: ACAGCATCTCTCGGACGGAGGCCGCTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCACAATGGCCCAGATGGAGAAAGCTCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000263398.11
ENST00000278386.10
ENST00000279452.10
ENST00000352818.8
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000442151.6
ENST00000525211.6
ENST00000526000.6
ENST00000526025.2
ENST00000526669.6
ENST00000528086.5
CDS-3UTR CAA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS GCA 90 bp CCAGTGGTCGGGTGCTGGTCTCTTACCTGCAGGTCTCAAATCCGATaGTCAGAGCTTTCTCCATCTGGGCCATTGTGGGCAAGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: PVVGCWSLTCRSQIR*SELSPSGPLWARCY
Trigger: ATAGCACCTTGCCCACAATGGCCCAGATGGAGAAAGCTCTGAGCATCGGATTTGAGACCTGCAGGTAAGAGACCAGCACCCGACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS TCA 90 bp GCTCCCAGCCTGCTGAGATGGTATTTGAAGACGTACCTGTTGTGGTaGCTTGCATTAGTGGCTGAGCTGGACGCCAAGCAACCCACTTGC +
Preference number: 5 (lower is better)
Translates to: APSLLRWYLKTYLLW*LALVAELDAKQPTC
Trigger: GCAAGTGGGTTGCTTGGCGTCCAGCTCAGCCACTAATGCAAGTCACCACAACAGGTACGTCTTCAAATACCATCTCAGCAGGCTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525348.1
ENST00000528922.1
CDS-3UTR CAA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGGCGTGCCACCAAAACTaGTCCATGGTGTCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: SGNVARVCEDLASSPLTMACHQN*SMVSGA
Trigger: CGCTCCGGACACCATGGACAAGTTTTGGTGGCACGC...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCGCGTGCCACCAAAACTaGTCCATGGTGTCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTACHQN*SMVSGA
Trigger: CGCTCCGGACACCATGGACAAGTTTTGGTGGCACGC...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACACAGTGCTGCCCTCCTaGGTCTTCCATGAGATTTGG +
Preference number: 5 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNTVLPS*VFHEIW
Trigger: CCAAATCTCATGGAAGACCAAGGAGGGCAGCACTGT...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS CCA 90 bp GAGCTGAGGCTGCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCTCATGCCATCTGTTGCCAAACCACT +
Preference number: 5 (lower is better)
Translates to: ELRLQLSLLSNGSLL*VFGDIPHAICCQTT
Trigger: AGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGCAGCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000531110.6
CDS-3UTR CAA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGATGTACACCCCTGTGTaGTTTGCTGCACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWMYTPV*FAAQME
Trigger: CTCCATCTGTGCAGCAAACAACACAGGGGTGTACAT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGAATCCCTTTAACCTTTaGAGGGACTCCCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWNPFNL*RDSPGT
Trigger: AGTGCCTGGGGAGTCCCTCAAAAGGTTAAAGGGATT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGTTTCAGTTAAAGAGCTaGAGTGAGCCTGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWFQLKS*SEPVWA
Trigger: GGCCCAGACAGGCTCACTCAAGCTCTTTAACTGAAA...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCGGATTTGAATGGCTaGGGTTCCACTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: GPIQISSQGPGPINPGKCPDLNG*GSTGSS
Trigger: ACTGGACCCAGTGGAACCCAAGCCATTCAAATCCGG...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCAGGTTTCTTGCCTCTaGGTTGCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNQVSCL*VAVSVA
Trigger: AGCAACTGAGACAGCAACCAAGAGGCAAGAAACCTG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp GGAAGCAGGTTAGACAAGAGGATTCCAGCCGAGAGGACCCCTAATGGCTTCCTCAGGCTGCCTCGGAAGTaGGCTGCAGTTTTTATTCGA +
Preference number: 5 (lower is better)
Translates to: GSRLDKRIPAERTPNGFLRLPRK*AAVFIR
Trigger: TCGAATAAAAACTGCAGCCAACTTCCGAGGCAGCCT...GAGGAAGCCATTAGGGGTCCTCTCGGCTGGAATCCTCTTGTCTAACCTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS TCA 90 bp TTCTTCCTGCTTGATGACCTCGTCCCATGGGGTGTGAGATTGGGTTaGAGAAATCAGTCCAGGAACTGTCCTCTGGGCTTGGTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: FFLLDDLVPWGVRLG*RNQSRNCPLGLVLS
Trigger: GGACAACACCAAGCCCAGAGGACAGTTCCTGGACTGATTTCTTCAACCCAATCTCACACCCCATGGGACGAGGTCATCAAGCAGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000525211.6
ENST00000526553.6
ENST00000531110.6
ENST00000532339.1
CDS CCA 90 bp GCTGCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AAAVPVVEWESSLGV*RYPSCHLLPNHCSF
Trigger: GAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000531110.6
CDS CCA 90 bp GAGGCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EAAVPVVEWESSLGV*RYPSCHLLPNHCSF
Trigger: GAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526553.6
CDS CCA 90 bp GAATGGCTTGGGTTCCACTGGGTCCAGTCCTGGTTCTGTTTTGTGTaGTCAAAAGCCCGTGGTGTGGTTGAAATGGTAGCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: EWLGFHWVQSWFCFV*SKARGVVEMVAGIL
Trigger: CAGAATCCCTGCTACCATTTCAACCACACCACGGGCTTTTGACCACACAAAACAGAACCAGGACTGGACCCAGTGGAACCCAAGCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528455.5
ENST00000534296.5
CDS CCA 90 bp TCCCCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPAVPVVEWESSLGV*RYPSCHLLPNHCSF
Trigger: GAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534082.1
CDS-3UTR CAA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GPIQISSQGPGPINPGKCVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AAGCCATCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACCACCTTCTTCGACTGTaGACTGCAATGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: KPSIAHPRDERPPSGNWNHLLRL*TAMQTA
Trigger: TGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTG...GTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SGNVARVCEDLASSPLTMLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAATCTGCTGCGTTGTCATaGAAAGAGGTCCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQSAALS*KEVLSC
Trigger: ACAGGACAGGACCTCTTTCAATGACAACGCAGCAGA...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTAGTCCTGGTTCTGTTTaGTGTGGTCAAAAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPSPGSV*CGQKPV
Trigger: CACGGGCTTTTGACCACACAAAACAGAACCAGGACT...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGAACTGTCCTCTGGGCTaGGTGTTGTCCTTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQNCPLG*VLSFLA
Trigger: TGCAAGGAAGGACAACACCAAGCCCAGAGGACAGTT...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp TACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAGCCTTCAGAATGATTaGGGTCTCTTCTTCCACCTG +
Preference number: 5 (lower is better)
Translates to: YTPTPNLSGKQCPGIRLWSLQND*GLFFHL
Trigger: CAGGTGGAAGAAGAGACCCAAATCATTCTGAAGGCT...CCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS TCA 90 bp CATATCCATCCTTCTTCCTGCTTGATGACCTCGTCCCATGGGGTGTaGGATTGGGTTGAAGAAATCAGTCCAGGAACTGTCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HIHPSSCLMTSSHGV*DWVEEISPGTVLWA
Trigger: AGCCCAGAGGACAGTTCCTGGACTGATTTCTTCAACCCAATCTCACACCCCATGGGACGAGGTCATCAAGCAGGAAGAAGGATGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000525211.6
ENST00000526553.6
ENST00000531110.6
ENST00000532339.1
CDS TCA 90 bp GGCATCACCAGCTTCCAGCTGTCTAGAGACGAGAAAATCAGCACGTaGGTGTGCAATGCTCAGGAAGGTCAGAGACATTTTGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GITSFQLSRDEKIST*VCNAQEGQRHFARE
Trigger: TTCCCTGGCAAAATGTCTCTGACCTTCCTGAGCATTGCACACTCACGTGCTGATTTTCTCGTCTCTAGACAGCTGGAAGCTGGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531118.5
CDS GCA 90 bp CCGAGAGATGCTGTAGCGACCATTTTTCTCCACGTGGAATACACCTaGAAAGCGGCAGGTTATATTCAAATCGATCTGCGCCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PRDAVATIFLHVEYT*KAAGYIQIDLRQAQ
Trigger: CTGAGCCTGGCGCAGATCGATTTGAATATAACCTGCCGCTTTGCAGGTGTATTCCACGTGGAGAAAAATGGTCGCTACAGCATCTCTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000263398.11
ENST00000278386.10
ENST00000352818.8
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000442151.6
ENST00000525211.6
ENST00000526025.2
ENST00000526669.6
ENST00000528086.5
CDS CCA 90 bp AGCACTTCCGGATTTGAATGGCTTGGGTTCCACTGGGTCCAGTCCTaGTTCTGTTTTGTGTGGTCAAAAGCCCGTGGTGTGGTTGAAATG +
Preference number: 5 (lower is better)
Translates to: STSGFEWLGFHWVQS*FCFVWSKARGVVEM
Trigger: CATTTCAACCACACCACGGGCTTTTGACCACACAAAACAGAACCAGGACTGGACCCAGTGGAACCCAAGCCATTCAAATCCGGAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000524922.1
ENST00000525348.1
ENST00000528455.5
ENST00000534296.5
CDS CCA 90 bp TATGAGCTGAGGCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCTCATGCCATCTGTTGCCAAACCACT +
Preference number: 5 (lower is better)
Translates to: YELRQLSLLSNGSLL*VFGDIPHAICCQTT
Trigger: AGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGCCTCAGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526553.6
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGCGTGCCACCAAAACTaGTCCATGGTGTCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDACHQN*SMVSGA
Trigger: CGCTCCGGACACCATGGACAAGTTTTGGTGGCACGC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CAA 90 bp TGCTTCCAGAGTTACGCCCTTGAGATCAAGGGAGTGAGAATACATCTTATTCCAGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: CFQSYALEIKGVRIHLIPAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...TGGAATAAGATGTATTCTCACTCCCTTGATCTCAAGGGCGTAACTCTGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCGGGGTGGAATGTGTCTaGGTCTCTGGTAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LETVWAAHGVGISCWLLSGVECV*VSGSRD
Trigger: ATCCCTGCTACCAGAGACCAAGACACATTCCACCCC...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CTTGGCCAGCTCTCCGTTGACAATGGCCAAGGAATAGAAGCTCTAGACCTCCCTGGAAGTTTTTCAAGATaGTGGGGTGAAGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LGQLSVDNGQGIEALDLPGSFSR*WGEVEG
Trigger: TCCCTCCACTTCACCCCACAATCTTGAAAAACTTCC...AGGGAGGTCTAGAGCTTCTATTCCTTGGCCATTGTCAACGGAGAGCTGGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGTAGCACTTCCGGATTaGAATGGCTTGGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQVALPD*NGLGST
Trigger: AGTGGAACCCAAGCCATTCAAATCCGGAAGTGCTAC...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS TCA 90 bp ATCTCCAACAGTAACTGCAGTAACTCCAAAGGACCCAGTCTTAGCTaGGGTCACTGGGATGAAGGTCCTGCTTTCCTTCGTGTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: ISNSNCSNSKGPSLS*GHWDEGPAFLRVWV
Trigger: TACCCACACACGAAGGAAAGCAGGACCTTCATCCCAGTGACCTCAGCTAAGACTGGGTCCTTTGGAGTTACTGCAGTTACTGTTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525293.5
ENST00000526000.6
ENST00000639002.1
CDS TCA 90 bp AGTCAATGCAGGCAGTTTACTGACAACCACAAGAGCCCACCTCCCTaGATGGCATCACCAGCTTCCAGCTGTCTAGAGACGAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: SQCRQFTDNHKSPPP*MASPASSCLETRKS
Trigger: TGATTTTCTCGTCTCTAGACAGCTGGAAGCTGGTGATGCCATTCAGGGAGGTGGGCTCTTGTGGTTGTCAGTAAACTGCCTGCATTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531118.5
CDS CCA 90 bp GAATGGCTTGGGTTCCACTGGGTCCAGTCCTGGTTCTGTTTTGTGTaGTCAAAAGCCCGTGGTGTGGTTGAAATGGTGCTGGAGATAAAA +
Preference number: 5 (lower is better)
Translates to: EWLGFHWVQSWFCFV*SKARGVVEMVLEIK
Trigger: TTTTATCTCCAGCACCATTTCAACCACACCACGGGCTTTTGACCACACAAAACAGAACCAGGACTGGACCCAGTGGAACCCAAGCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000524922.1
ENST00000525348.1
CDS CCA 90 bp TGGAGTCCATATCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCTCATGCCATCTGTTGCCAAACCACT +
Preference number: 5 (lower is better)
Translates to: WSPYQLSLLSNGSLL*VFGDIPHAICCQTT
Trigger: AGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGATATGGACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528672.1
CDS CCA 90 bp TGGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTCTaGGTAGCTGTTTCTTCCGTTGTACTACTAGGAGTTGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: WRYPSCHLLPNHCSF*VAVSSVVLLGVAWM
Trigger: CATCCAGGCAACTCCTAGTAGTACAACGGAAGAAACAGCTACCCAGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525241.1
ENST00000531110.6
CDS CCA 90 bp TTACCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPAVPVVEWESSLGV*RYPSCHLLPNHCSF
Trigger: GAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525241.1
ENST00000534296.5
CDS CCA 90 bp ACCATCCATTACCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTaGGTGTTTGGCGATATCCCTCATGCCATCTGTTGCCAAACCACT +
Preference number: 5 (lower is better)
Translates to: TIHYQLSLLSNGSLL*VFGDIPHAICCQTT
Trigger: AGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGGTAATGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525241.1
ENST00000534296.5
CDS CCA 90 bp TGGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTCTaGGTAGCTGTTTCTTCCGTTGTACTACTAGGAGTTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: WRYPSCHLLPNHCSF*VAVSSVVLLGVAWT
Trigger: TGTCCAGGCAACTCCTAGTAGTACAACGGAAGAAACAGCTACCCAGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526553.6
CDS-3UTR CAA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTATGTACACCCCTGTGTaGTTTGCTGCACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIMYTPV*FAAQME
Trigger: CTCCATCTGTGCAGCAAACAACACAGGGGTGTACAT...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGAATGCCACAAAGGACTaGCCAAGTGGGAGAAAATAT +
Preference number: 5 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWNATKD*PSGRKY
Trigger: ATATTTTCTCCCACTTGGCAAGTCCTTTGTGGCATT...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGCTGTTGTAACCATTTaGAACCTTGTCCTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMAVVTI*NLVLEW
Trigger: CCACTCCAGGACAAGGTTCAAAATGGTTACAACAGC...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCACTTCATTTTCTTCATTaGGCTCCCAGCCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPLHFLH*APSLLR
Trigger: TCTCAGCAGGCTGGGAGCCAAATGAAGAAAATGAAG...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp GCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCATTGTCCTTCCTTGCATaGGATGGCTGGTATGAGCTG +
Preference number: 5 (lower is better)
Translates to: AQGLGYGRAKWTHSNFLPLSFLA*DGWYEL
Trigger: CAGCTCATACCAGCCATCCAATGCAAGGAAGGACAA...TGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp GTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGGTGTGAGATTGGGTaGAAGAAATCAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: VTSTPQPPTSVESNAQGLGCEIG*KKSVQE
Trigger: TTCCTGGACTGATTTCTTCAACCCAATCTCACACCC...TAATCCCTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTGCTCCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFAPQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGGAGC...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526669.6
CDS GCA 90 bp GTTGTCGAATGGGAGTCTTCTTTGGGTGTTTGGCGATATCCCTCATaGCATCTGTTGCCAAACCACTGTTCCTTCTGGGTAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VVEWESSLGVWRYPS*HLLPNHCSFWVAVS
Trigger: AGAAACAGCTACCCAGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000525241.1
ENST00000526553.6
ENST00000528672.1
ENST00000531110.6
ENST00000534082.1
ENST00000534296.5
CDS CCA 90 bp TGGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTCTaGGTAGCTGTTTCTTCCGTTGTACTACTAGGAGTTGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: WRYPSCHLLPNHCSF*VAVSSVVLLGVAWI
Trigger: AATCCAGGCAACTCCTAGTAGTACAACGGAAGAAACAGCTACCCAGAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415148.6
ENST00000428726.8
ENST00000528672.1
ENST00000534082.1
ENST00000534296.5
CDS CCA 90 bp ATATCAGCTGTCCCTGTTGTCGAATGGGAGTCTTCTTTGGGTGTTTaGCGATATCCCTCATGCCATCTGTTGCCAAACCACTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ISAVPVVEWESSLGV*RYPSCHLLPNHCSF
Trigger: GAAGGAACAGTGGTTTGGCAACAGATGGCATGAGGGATATCGCCAAACACCCAAAGAAGACTCCCATTCGACAACAGGGACAGCTGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528672.1
CDS-3UTR CAA 90 bp AATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGCGTGCCACCAAAACTaGTCCATGGTGTCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: NETISSTLHLLSVPAPCNACHQN*SMVSGA
Trigger: CGCTCCGGACACCATGGACAAGTTTTGGTGGCACGC...ATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000526669.6
CDS-3UTR CAA 90 bp AGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SNAQGLGYGRAKWTHSNFVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...GAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AGGATTCGTTCTGTATTCTCCTTTCTGGACATAGCGGGTGCCATCACGGTTAACCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: RIRSVFSFLDIAGAITVNQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...GTTAACCGTGATGGCACCCGCTATGTCCAGAAAGGAGAATACAGAACGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR CAA 90 bp CGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: RGMKGLQVGTGTIKFLLIQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...AATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTCACCTTCTTCGACTGTaGACTGCAATGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIHLLRL*TAMQTA
Trigger: TGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTG...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGGCTCCATTGCCACTGTaGATCACTAGCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQAPLPL*ITSFFF
Trigger: GAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGC...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAGCTCCATTGCCACTGTaGATCACTAGCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPAPLPL*ITSFFF
Trigger: GAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGC...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp GAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ETISSTLHLLSVPAPCNGLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...ACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAGTTTCTGACGACTCCTaGTTCACCAAATGCACCATT +
Preference number: 5 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPVSDDS*FTKCTI
Trigger: AATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAAC...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp GTGCTGTCGGTGATCCAGGGACTGTCTTCGTCTGGGATGGGGTGTACAGTAGAAGGAACGATCAAATTCTaGCTGATTATTAATTGGGCC +
Preference number: 5 (lower is better)
Translates to: VLSVIQGLSSSGMGCTVEGTIKF*LIINWA
Trigger: GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCC...TTCTACTGTACACCCCATCCCAGACGAAGACAGTCCCTGGATCACCGACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS-3UTR CAA 90 bp TTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTAGCTGGTGGGGAACGATCAAATTCTaGCTGATTATTAATTGGGCC +
Preference number: 5 (lower is better)
Translates to: FPPRDQALLTLGNVLSWWGTIKF*LIINWA
Trigger: GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCC...CCACCAGCTAAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGCTGTTGTAACCATTTaGAACCTTGTCCTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNAVVTI*NLVLEW
Trigger: CCACTCCAGGACAAGGTTCAAAATGGTTACAACAGC...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATCCGGATTTGAATGGCTaGGGTTCCACTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDPDLNG*GSTGSS
Trigger: ACTGGACCCAGTGGAACCCAAGCCATTCAAATCCGG...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CAA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTGGGCTGCCCATGGTGTaGGAATTAGCTGTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSGLPMV*ELAVGC
Trigger: GCAACCAACAGCTAATTCCAACACCATGGGCAGCCC...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGCCCACACCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDAHTWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGGTGTGGGC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525469.1
CDS TCA 90 bp ATGGTATTTGAAGACGTACCTGTTGTGGTGACTTGCATTAGTGGCTaGGCTGGACGCCAAGCAACCCACTTGCAAAGGAAGAAAATCAGG +
Preference number: 5 (lower is better)
Translates to: MVFEDVPVVVTCISG*AGRQATHLQRKKIR
Trigger: CCTGATTTTCTTCCTTTGCAAGTGGGTTGCTTGGCGTCCAGCTCAGCCACTAATGCAAGTCACCACAACAGGTACGTCTTCAAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525348.1
ENST00000528922.1
CDS TCA 90 bp TTGTCCTTCCTTGCATTGGATGGCTGGTATGAGCTGAGGCTGCTGTaGCCATGCAGTTTGAGCAATTGTCAAAGTGTTAATGGACGCTTG +
Preference number: 5 (lower is better)
Translates to: LSFLALDGWYELRLL*PCSLSNCQSVNGRL
Trigger: CAAGCGTCCATTAACACTTTGACAATTGCTCAAACTGCATGGTCACAGCAGCCTCAGCTCATACCAGCCATCCAATGCAAGGAAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532339.1
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CAA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CAA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp TTAATACGTGGGGTTGACTCCTTAGGCAATAATCCATTCAGCTGTGGGAAAGGAGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LIRGVDSLGNNPFSCGKGVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...TCCTTTCCCACAGCTGAATGGATTATTGCCTAAGGAGTCAACCCCACGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS-3UTR CAA 90 bp ATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTGGTGGAGCTGAAGCATaGAAGCAATATGTGTCATAC +
Preference number: 5 (lower is better)
Translates to: MEGQNGPIQISSQGPGPIGGAEA*KQYVSY
Trigger: GTATGACACATATTGCTTCAATGCTTCAGCTCCACC...AATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263398.11
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGAGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp GGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: GMKGLQVGTGTIKFLLIIGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...AATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp GTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGATGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: VSQLPVMVMFPTVVSFQDDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...ATCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp AGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTCCAAGAGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: SVPAPCNGYVSNGCFFPRDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...TCTTGGAAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCGCTCCATTGCCACTGTaGATCACTAGCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KGKMDPFKFPPRDQALLTAPLPL*ITSFFF
Trigger: GAAGAAAAAGCTAGTGATCAACAGTGGCAATGGAGC...GGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CAA 90 bp ATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTTGCTGGCCTCTCCGTaGAGTCCACTTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ISSTLHLLSVPAPCNGYVLLASP*SPLGFL
Trigger: CAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAA...AACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000525469.1
ENST00000526669.6
CDS-3UTR CAA 90 bp CCCAACCTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PNLSGKQCPGIRLWKGKMTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...CATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAGGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCACAGTGCTGCCCTCCTaGGTCTTCCATGAGATTTGG +
Preference number: 5 (lower is better)
Translates to: IRNETISSTLHLLSVPAPTVLPS*VFHEIW
Trigger: CCAAATCTCATGGAAGACCAAGGAGGGCAGCACTGT...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp GGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCACTTCCATATTGTTTTaGGAAATCACTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: GYGRAKWTHSNFLPGTRPTSILF*EITNRA
Trigger: GGCCCTATTAGTGATTTCCAAAAACAATATGGAAGT...GGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCATTTTGCCCTTCCATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp CCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTAATGCCACAAAGGACTaGCCAAGTGGGAGAAAATAT +
Preference number: 5 (lower is better)
Translates to: PIQISSQGPGPINPGKCPNATKD*PSGRKY
Trigger: ATATTTTCTCCCACTTGGCAAGTCCTTTGTGGCATT...AGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp GGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTAAACTTCAGGCAATGTaGCAAGGGTTTGTGAAGACT +
Preference number: 5 (lower is better)
Translates to: GPIQISSQGPGPINPGKCKLQAM*QGFVKT
Trigger: AGTCTTCACAAACCCTTGCAACATTGCCTGAAGTTT...ACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp GGCCTCCAAGTGGGAACTGGAACGATCAAATTCTTGCTGATTATTAATTGGGCCTCTGCTGCGTTGTCATaGAAAGAGGTCCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: GLQVGTGTIKFLLIINWASAALS*KEVLSC
Trigger: ACAGGACAGGACCTCTTTCAATGACAACGCAGCAGA...GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCCAGTTCCCACTTGGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTGTAGCACTTCCGGATTaGAATGGCTTGGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: RNETISSTLHLLSVPAPCVALPD*NGLGST
Trigger: AGTGGAACCCAAGCCATTCAAATCCGGAAGTGCTAC...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CAA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTGAATGGGAGTCTTCTTaGGGTGTTTGGCGATATCCC +
Preference number: 5 (lower is better)
Translates to: RNETISSTLHLLSVPAPCEWESS*GVWRYP
Trigger: GGGATATCGCCAAACACCCAAAGAAGACTCCCATTC...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CAA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTTTGTCCTTCCTTGCATaGGATGGCTGGTATGAGCTG +
Preference number: 5 (lower is better)
Translates to: RNETISSTLHLLSVPAPCLSFLA*DGWYEL
Trigger: CAGCTCATACCAGCCATCCAATGCAAGGAAGGACAA...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415148.6
ENST00000428726.8
CDS-3UTR CAA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAAGTGACATCATTCCTATaGCTTGATGTCAGAGTAGAA +
Preference number: 5 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQVTSFL*LDVRVE
Trigger: TTCTACTCTGACATCAAGCAATAGGAATGATGTCAC...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp TCCATAGCACACCCGAGGGATGAAAGGCCTCCAAGTGGGAACTGGAACGATCAACGATTGACATTAGAGTaGGAATCTCCAACAGTAACT +
Preference number: 5 (lower is better)
Translates to: SIAHPRDERPPSGNWNDQRLTLE*ESPTVT
Trigger: AGTTACTGTTGGAGATTCCAACTCTAATGTCAATCG...TTGATCGTTCCAGTTCCCACTTGGAGGCCTTTCATCCCTCGGGTGTGCTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACCCAATCCCAGGTTTCTaGCCTCTTGGTTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNPIPGF*PLGCCL
Trigger: GAGACAGCAACCAAGAGGCAAGAAACCTGGGATTGG...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp TCAGGCAATGTTGCAAGGGTTTGTGAAGACTTGGCCAGCTCTCCGTTGACAATGCTGCTGAGATGGTATTaGAAGACGTACCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: SGNVARVCEDLASSPLTMLLRWY*KTYQPF
Trigger: AAATGGCTGGTACGTCTTCAAATACCATCTCAGCAG...CATTGTCAACGGAGAGCTGGCCAAGTCTTCACAAACCCTTGCAACATTGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428726.8
CDS-3UTR CAA 90 bp TCTGACAATGATACTGCAGCTTCTTCAAAGCCAGGAGAGCTCTGTGGAAGCAGGCAGTTGTCATACAGGTaGCAGATTGACTTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SDNDTAASSKPGELCGSRQLSYR*QIDLAK
Trigger: TTTGGCCAAGTCAATCTGCAACCTGTATGACAACTG...CCTGCTTCCACAGAGCTCTCCTGGCTTTGAAGAAGCTGCAGTATCATTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526025.2
CDS TCA 90 bp AGTTATGGTAATTGGTCCATCAAAGGCATTGGGCAGGTCTGTGACTaGTGTACAATCTTCTTCAGGTGGAGCTGCAGGTCTCAAATCCGA +
Preference number: 5 (lower is better)
Translates to: SYGNWSIKGIGQVCD*CTIFFRWSCRSQIR
Trigger: TCGGATTTGAGACCTGCAGCTCCACCTGAAGAAGATTGTACATCAGTCACAGACCTGCCCAATGCCTTTGATGGACCAATTACCATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425428.6
CDS GCA 90 bp GACTCTGATGGTAGAAACAACCATGAAAACCAATCCCAGGTTTCTTaGCTCTTGGTTGCTGTCTCAGTTGCTGTAGCACTAGTGCTCATC +
Preference number: 5 (lower is better)
Translates to: DSDGRNNHENQSQVS*LLVAVSVAVALVLI
Trigger: GATGAGCACTAGTGCTACAGCAACTGAGACAGCAACCAAGAGGCAAGAAACCTGGGATTGGTTTTCATGGTTGTTTCTACCATCAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428726.8
ENST00000525685.6
CDS GCA 90 bp AGGTCCTGTCCTGTCCAAATCTTCCACCAAACCTGTGTTTGGATTTaGAGTAGGCTGAAGCGTTATACTATGACTGGAGTCCATATCAGC +
Preference number: 5 (lower is better)
Translates to: RSCPVQIFHQTCVWI*SRLKRYTMTGVHIS
Trigger: GCTGATATGGACTCCAGTCATAGTATAACGCTTCAGCCTACTGCAAATCCAAACACAGGTTTGGTGGAAGATTTGGACAGGACAGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528672.1
CDS GCA 90 bp AGGTCCTGTCCTGTCCAAATCTTCCACCAAACCTGTGTTTGGATTTaGAGTAGGCTGAAGCGTTATACTATGACTGGAGTCCATATCTCC +
Preference number: 5 (lower is better)
Translates to: RSCPVQIFHQTCVWI*SRLKRYTMTGVHIS
Trigger: GGAGATATGGACTCCAGTCATAGTATAACGCTTCAGCCTACTGCAAATCCAAACACAGGTTTGGTGGAAGATTTGGACAGGACAGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527889.6
CDS CCA 90 bp TCTTCTTCAGGTGGAGCTGAAGCATTGAAGCAATATGTGTCATACTaGGAGGTGTTGGATGTGAGGATGTACACCCCTGTGTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SSSGGAEALKQYVSY*EVLDVRMYTPVLFA
Trigger: AGCAAACAACACAGGGGTGTACATCCTCACATCCAACACCTCCCAGTATGACACATATTGCTTCAATGCTTCAGCTCCACCTGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000263398.11
ENST00000279452.10
ENST00000352818.8
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000442151.6
ENST00000525211.6
ENST00000526000.6
ENST00000527889.6
ENST00000528455.5
ENST00000531118.5
ENST00000531873.5
CDS-3UTR CAA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTGTGGGCAAGGTGCTATaGAAAGCCTTGCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFVGKVL*KALQRS
Trigger: TGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCAC...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CAA 90 bp AAAAAGATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: KKIRNETISSTLHLLSVPAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...TGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp GGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATTTAAATTCAGCTGCACAGATGGAGTaGGGGTGGATCCGGGGAATC +
Preference number: 5 (lower is better)
Translates to: GGIKTLCKGSPKSHYLNSAAQME*GWIRGI
Trigger: GATTCCCCGGATCCACCCCAACTCCATCTGTGCAGC...TGAATTTAAATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp ATTCGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCATGTACACCCCTGTGTaGTTTGCTGCACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: IRNETISSTLHLLSVPAPMYTPV*FAAQME
Trigger: CTCCATCTGTGCAGCAAACAACACAGGGGTGTACAT...GGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTATGTACACCCCTGTGTaGTTTGCTGCACAGATGGAG +
Preference number: 5 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSMYTPV*FAAQME
Trigger: CTCCATCTGTGCAGCAAACAACACAGGGGTGTACAT...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp TTAGAGACTGTATGGGCTGCCCATGGTGTTGGAATTAGCTGTTGGTTGCTTTCCGGTGGAGCTGAAGCATaGAAGCAATATGTGTCATAC +
Preference number: 5 (lower is better)
Translates to: LETVWAAHGVGISCWLLSGGAEA*KQYVSY
Trigger: GTATGACACATATTGCTTCAATGCTTCAGCTCCACC...GGAAAGCAACCAACAGCTAATTCCAACACCATGGGCAGCCCATACAGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp ACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: TISSTLHLLSVPAPCNGYGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...ATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATGGTCCATCAAAGGCATaGGGCAGGTCTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYGPSKA*GRSVTD
Trigger: ATCAGTCACAGACCTGCCCAATGCCTTTGATGGACC...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp CTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACGGTTGTTTCTTTGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: LLSVPAPCNGYVSNGCFFDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...AAAGAAACAACCGTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
CDS-3UTR CAA 90 bp AAGCTGAAGGGAGGTATAAAGACTCTTTGTAAAGGCTCCCCCAAGTCACATTATGACCAGAGGTTGTGTTaGCTCCACCTTCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: KLKGGIKTLCKGSPKSHYDQRLC*LHLLDS
Trigger: GGAGTCAAGAAGGTGGAGCAAACACAACCTCTGGTC...ATAATGTGACTTGGGGGAGCCTTTACAAAGAGTCTTTATACCTCCCTTCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp AAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAATTTCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: KQCPGIRLWKGKMDPFKFQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...AAATTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
CDS-3UTR CAA 90 bp TCTCTGCTTCATAGACCTCCTAACAGCAAGAAGACGATGAAACAGTGCTCTTCTCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: SLLHRPPNSKKTMKQCSSQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...AGAAGAGCACTGTTTCATCGTCTTCTTGCTGTTAGGAGGTCTATGAAGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442151.6
CDS-3UTR CAA 90 bp AGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTAATGGTTATGTTTCCAACCAGCCATTCTGGAATTaGGGGTGTCCTTATAGGACC +
Preference number: 5 (lower is better)
Translates to: STLHLLSVPAPCNGYVSNQPFWN*GCPYRT
Trigger: GGTCCTATAAGGACACCCCAAATTCCAGAATGGCTG...GTTGGAAACATAACCATTACAGGGAGCTGGGACACTTAACAGATGCAATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CAA 90 bp CGCAATGAAACAATCAGTAGCACATTGCATCTGTTAAGTGTCCCAGCTCCCTGTCACCTTCTTCGACTGTaGACTGCAATGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: RNETISSTLHLLSVPAPCHLLRL*TAMQTA
Trigger: TGCAGTTTGCATTGCAGTCAACAGTCGAAGAAGGTG...ACAGGGAGCTGGGACACTTAACAGATGCAATGTGCTACTGATTGTTTCATTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263398.11
ENST00000415148.6
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000434472.6
ENST00000526669.6
CDS-3UTR CAA 90 bp GGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCATTCAAAGTTTCTGACGACTCCTaGTTCACCAAATGCACCATT +
Preference number: 5 (lower is better)
Translates to: GKQCPGIRLWKGKMDPFKVSDDS*FTKCTI
Trigger: AATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAAC...TTTGAATGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp CCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATGTCCTTACAATCAGTAGCACATaGCATCTGTTAAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PFKFPPRDQALLTLGNVLTISST*HLLSVP
Trigger: TGGGACACTTAACAGATGCAATGTGCTACTGATTGT...AAGGACATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp CTCAGTGGAAAGCAATGCCCAGGGATTAGGCTATGGAAGGGCAAAATGGACCCAGGAACGATCAAATTCTaGCTGATTATTAATTGGGCC +
Preference number: 5 (lower is better)
Translates to: LSGKQCPGIRLWKGKMDPGTIKF*LIINWA
Trigger: GGCCCAATTAATAATCAGCAAGAATTTGATCGTTCC...TGGGTCCATTTTGCCCTTCCATAGCCTAATCCCTGGGCATTGCTTTCCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263398.11
ENST00000425428.6
ENST00000428726.8
ENST00000433892.6
ENST00000525469.1
CDS-3UTR CAA 90 bp AGATGTGTAACTAGTACACCCCAACCCCCAACCTCAGTGGAAAGCAATGCCCAGAAACTTAATGTGACTTaGCAAAGCCTTTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RCVTSTPQPPTSVESNAQKLNVT*QSLSQE
Trigger: CTCCTGTGAAAGGCTTTGCAAAGTCACATTAAGTTT...CTGGGCATTGCTTTCCACTGAGGTTGGGGGTTGGGGTGTACTAGTTACACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8
CDS-3UTR CAA 90 bp ATGGACCCATTCAAATTTCCTCCCAGGGACCAGGCCCTATTAACCCTGGGAAATCCAGTACTCTCTTGTTaGGTCATAAACTTGCCTATC +
Preference number: 5 (lower is better)
Translates to: MDPFKFPPRDQALLTLGNPVLSC*VINLPI
Trigger: GATAGGCAAGTTTATGACCAAACAAGAGAGTACTGG...ATTTCCCAGGGTTAATAGGGCCTGGTCCCTGGGAGGAAATTTGAATGGGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263398.11
ENST00000428726.8