RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD38 (Homo sapiens)

Ensembl gene IDs: ENSG00000004468

Ensembl transcript IDs: ENST00000226279.8, ENST00000502843.5, ENST00000506191.1, ENST00000510674.1, ENST00000511430.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGTGGCTCCCTGGGACCCTCTAAAGCACTGTGCAAAATCCTTGTaGCCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACAC +
Preference number: 1 (lower is better)
Translates to: SVAPWDPLKHCAKSL*PPSPKVSTGSELEH
Trigger: GTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGGATTTTGCACAGTGCTTTAGAGGGTCCCAGGGAGCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 90 bp GGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGAAACTaGATTGTCAAGCAGGGGAGGAAGAAAGGAACCAACTCTGTTGAG +
Preference number: 1 (lower is better)
Translates to: GLTMVATATKAPVGN*IVKQGRKKGTNSVE
Trigger: CTCAACAGAGTTGGTTCCTTTCTTCCTCCCCTGCTTGACAATCCAGTTTCCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 90 bp ACAGGCAGCTTCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTaGAACAGGGTTGTTGCTGCAGTCCTTTCTCCAGTCTGGGCAAGA +
Preference number: 1 (lower is better)
Translates to: TGSFCKPAGNRFPEY*NRVVAAVLSPVWAR
Trigger: TCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGAAGCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR CCA 90 bp GGGGGTATTTATACATGTAGGTCAGAAAGTCCTTCGGGCCAGAGATaGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGAGGTAGA +
Preference number: 1 (lower is better)
Translates to: GGIYTCRSESPSGQR*QRYPRWNYRGKGGR
Trigger: TCTACCTCCTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACTTTCTGACCTACATGTATAAATACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 90 bp CTGTTTTTGTCAAAGATTTTACTGCGGGATCCATTGAGCATCACATaGACCACATCACAGGCAGCTTCTGCAAACCTGCGGGAAACCGTT +
Preference number: 1 (lower is better)
Translates to: LFLSKILLRDPLSIT*TTSQAASANLRETV
Trigger: AACGGTTTCCCGCAGGTTTGCAGAAGCTGCCTGTGATGTGGTCCATGTGATGCTCAATGGATCCCGCAGTAAAATCTTTGACAAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR TCA 90 bp GCCTCCGAATTCCATAGTTTCCACCGCCTTGCGCTACTTGCATTCTaGTTAGAGAATGGTAATGTGTGCCTCTCTGAATCAAGTTCAAGA +
Preference number: 1 (lower is better)
Translates to: ASEFHSFHRLALLAF*LENGNVCLSESSSR
Trigger: TCTTGAACTTGATTCAGAGAGGCACACATTACCATTCTCTAATCAGAATGCAAGTAGCGCAAGGCGGTGGAAACTATGGAATTCGGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR GCA 90 bp TTGTCAAGCAGGGGAGGAAGAAAGGAACCAACTCTGTTGAGTGCTTaGTTATTTAGGAAGCTCTGTGCTGGACTCAATTTTTGCTGTCGT +
Preference number: 1 (lower is better)
Translates to: LSSRGGRKEPTLLSA*LFRKLCAGLNFCCR
Trigger: ACGACAGCAAAAATTGAGTCCAGCACAGAGCTTCCTAAATAAGCAAGCACTCAACAGAGTTGGTTCCTTTCTTCCTCCCCTGCTTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 90 bp ATGATGTATGCAGGCTTGTGTGCGTGTGTTTGTGTATGTATCATATaGCTGTATACAGGCACGTGTGTGTGTGTGGGTGTATGCAGTCAT +
Preference number: 1 (lower is better)
Translates to: MMYAGLCACVCVCII*LYTGTCVCVGVCSH
Trigger: ATGACTGCATACACCCACACACACACACGTGCCTGTATACAGTCATATGATACATACACAAACACACGCACACAAGCCTGCATACATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 90 bp GCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAAGATaGATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCT +
Preference number: 1 (lower is better)
Translates to: AKTTTATGSDLRCAR*ILRIFHTLKKLVRS
Trigger: AGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR TCA 90 bp AAACTGGATTGTCAAGCAGGGGAGGAAGAAAGGAACCAACTCTGTTaGGTGCTTGCTTATTTAGGAAGCTCTGTGCTGGACTCAATTTTT +
Preference number: 1 (lower is better)
Translates to: KLDCQAGEEERNQLC*VLAYLGSSVLDSIF
Trigger: AAAAATTGAGTCCAGCACAGAGCTTCCTAAATAAGCAAGCACTCAACAGAGTTGGTTCCTTTCTTCCTCCCCTGCTTGACAATCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 90 bp CAAGCTAATCACCACTTCTCTGGGCAGCACCTCTCAGCTGCCTACTaGGTTCTTGGTGGATTGCTTAAAATACATACTAAAATGATGACT +
Preference number: 1 (lower is better)
Translates to: QANHHFSGQHLSAAY*VLGGLLKIHTKMMT
Trigger: AGTCATCATTTTAGTATGTATTTTAAGCAATCCACCAAGAACTCAGTAGGCAGCTGAGAGGTGCTGCCCAGAGAAGTGGTGATTAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 90 bp TTTGTGTATGTATCATATGACTGTATACAGGCACGTGTGTGTGTGTaGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCC +
Preference number: 1 (lower is better)
Translates to: FVYVSYDCIQARVCV*VYAVICTYVCVCVS
Trigger: GGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACACACACACACGTGCCTGTATACAGTCATATGATACATACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 90 bp ATGGTGGGTGAAAGTTGGGATGGTAAGAGAATTTTCTACAGCAAATaGGAATGGAGTAGGCAGACAGGGAGTAGTAGATTTACGAGTAAA +
Preference number: 1 (lower is better)
Translates to: MVGESWDGKRIFYSK*EWSRQTGSSRFTSK
Trigger: TTTACTCGTAAATCTACTACTCCCTGTCTGCCTACTCCATTCTCATTTGCTGTAGAAAATTCTCTTACCATCCCAACTTTCACCCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGGTCACCCAGGAGACTaGCCGGGCCCCGATTCTGAA +
Preference number: 2 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKGHPGD*PGPDSE
Trigger: TTCAGAATCGGGGCCCGGTCAGTCTCCTGGGTGACC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 90 bp TTGGAAGGGGATGTGGCCCAGGCAGCCACTTCAAGGGGTATCCTGTaGAGCAAGGACTCGATGAGTCCCGAAAGCAGCAACCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: LEGDVAQAATSRGIL*SKDSMSPESSNQSG
Trigger: TCCACTTTGGTTGCTGCTTTCGGGACTCATCGAGTCCTTGCTCAACAGGATACCCCTTGAAGTGGCTGCCTGGGCCACATCCCCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR GCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGTGATCACAGCTCCCTaGAGCCTCAACCTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKVITAP*SLNLPS
Trigger: GCTTGGGAGGTTGAGGCTGCAGGGAGCTGTGATCAC...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAGCTCCTGTGGGAAACTaGATTGTCAAGCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQAPVGN*IVKQGR
Trigger: CCTCCCCTGCTTGACAATCCAGTTTCCCACAGGAGC...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAATTCCGTCTCTGGCATTaGCCTTATTGTGGAGGACCC +
Preference number: 2 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKFRLWH*PYCGGP
Trigger: GGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAA...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACACCGGGCCCCGATTCTaGAGACATTCTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDTGPRF*RHSAGG
Trigger: TCCCCCTGCAGAATGTCTTCAGAATCGGGGCCCGGT...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGAGCTAATGGCAACTTaGGGCAAGTCTGATTCTCAC +
Preference number: 2 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKELMAT*GKSDSH
Trigger: GTGAGAATCAGACTTGCCCCAAGTTGCCATTAGCTC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAACAACCACAGCGACTaGCTCAGATCTCAGATGTGC +
Preference number: 2 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPNNHSD*LRSQMC
Trigger: GCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTT...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR TCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGGGAGTTGGACAGAGTTaGGTTCAAATTCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGGVGQS*VQIQSL
Trigger: TAGAGACTGAATTTGAACTCAACTCTGTCCAACTCC...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR GCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCACTGAAACAGGGTTGTTaGTGCAGTCCTTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESLKQGC*CSPFSS
Trigger: ACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAG...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR GCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACTCACTCAGGCCAGAGTaGAGTGGTGTGATCACAGCT +
Preference number: 2 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDSLRPE*SGVITA
Trigger: AGCTGTGATCACACCACTGCACTCTGGCCTGAGTGA...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGCCTTCGGGCCAGAGATaGCAAAGATACCCACGTTGG +
Preference number: 2 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKPSGQR*QRYPRW
Trigger: CCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGG...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 90 bp AGGAATAAGGCACCAAGAAGTAAGTCGATGTCGATGCTGTCCCCCTaGTATCACAGTGTGCAGACATGGGTTGAGCTTCTTCCAAACAAG +
Preference number: 2 (lower is better)
Translates to: RNKAPRSKSMSMLSP*YHSVQTWVELLPNK
Trigger: CTTGTTTGGAAGAAGCTCAACCCATGTCTGCACACTGTGATACAAGGGGGACAGCATCGACATCGACTTACTTCTTGGTGCCTTATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCACCAGCAGGTATGCTaGGTCATGTATGATGACATA +
Preference number: 2 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHHQQVC*VMYDDI
Trigger: TATGTCATCATACATGACTCAGCATACCTGCTGGTG...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR TCA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAACGTTTTCCAGAATACTaGAACAGGGTTGTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: GVKELKQPQRLAQISDVQRFPEY*NRVVAA
Trigger: TGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACG...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR TCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAATGAAGTTTATGGTTTaGCTATCTGTAGGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQMKFMV*LSVGRV
Trigger: TACCCTTCCTACAGATAGTCAAACCATAAACTTCAT...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCATTTTCAATAAATTGTaGTCATTCCCTGAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSIFNKL*SFPEGV
Trigger: GACTCCTTCAGGGAATGACCACAATTTATTGAAAAT...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 90 bp TCCCCACTGTTGGCATATGATGTATGCAGGCTTGTGTGCGTGTGTTaGTGTATGTATCATATGACTGTATACAGGCACGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SPLLAYDVCRLVCVC*CMYHMTVYRHVCVC
Trigger: ACACACACACACGTGCCTGTATACAGTCATATGATACATACACAAACACACGCACACAAGCCTGCATACATCATATGCCAACAGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR GCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACGTGTGTGTGGGTGTATaGAGTCATATGCACTTACGT +
Preference number: 2 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDVCVGV*SHMHLR
Trigger: ACGTAAGTGCATATGACTGCATACACCCACACACAC...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAGTTATTTTAAGACTTTaGGGAAAAAGGCTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPVILRL*GKRLPS
Trigger: AGACGGAAGCCTTTTTCCCCAAAGTCTTAAAATAAC...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR TCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACATACTGCGGGATCCATTaGGCATCACATGGACCACAT +
Preference number: 2 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTYCGIH*ASHGPH
Trigger: ATGTGGTCCATGTGATGCTCAATGGATCCCGCAGTA...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR TCA 90 bp TGCAAGATGAATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCTGTCAGGCCTCTAGTGTCTaGACCTTCTCTGGTTGCAAA +
Preference number: 2 (lower is better)
Translates to: CKMNPQDFSHTEETCQVCQASSV*TFSGCK
Trigger: TTTGCAACCAGAGAAGGTTCAGACACTAGAGGCCTG...ACAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR GCA 90 bp CCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATCCACACTCCCAAAAGTaGTGTTTTTGTCAAAGATTT +
Preference number: 2 (lower is better)
Translates to: PQGVKELKQPQRLAQISDPHSQK*CFCQRF
Trigger: AAATCTTTGACAAAAACAGCACTTTTGGGAGTGTGG...ATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR GCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRKQGCC*SPFSSL
Trigger: CAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTT...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR CCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACGTTATTTTAAGACTTTaGGGAAAAAGGCTTCCGTCT +
Preference number: 2 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDVILRL*GKRLPS
Trigger: AGACGGAAGCCTTTTTCCCCAAAGTCTTAAAATAAC...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGATTGTGGTCATTCCCTaGAGGAGTCTCAAATTAATT +
Preference number: 2 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKIVVIP*RSLKLI
Trigger: AATTAATTTGAGACTCCTTCAGGGAATGACCACAAT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 90 bp CTCAGGGCTAAAGTAAGACCTACTGGATGCTGCAATTACTGTGGATaGAGAGACACTGTTGTTGTAACAGGAAAGTATATATACAGTCAT +
Preference number: 2 (lower is better)
Translates to: LRAKVRPTGCCNYCG*RDTVVVTGKYIYSH
Trigger: ATGACTGTATATATACTTTCCTGTTACAACAACAGTGTCTCTCAATCCACAGTAATTGCAGCATCCAGTAGGTCTTACTTTAGCCCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCACCAGCAGGTATGCTaGGTCATGTATGATGACATA +
Preference number: 2 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSHQQVC*VMYDDI
Trigger: TATGTCATCATACATGACTCAGCATACCTGCTGGTG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR TCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACAGAAGGAAAAAGCACATaGATTTTGGAGTTGGACAGA +
Preference number: 2 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTEGKST*ILELDR
Trigger: TCTGTCCAACTCCAAAATTCATGTGCTTTTTCCTTC...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGGCATTGACCTTATTGTaGAGGACCCTCCAAAATCTT +
Preference number: 2 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRALTLL*RTLQNL
Trigger: AAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGC...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCGCATTGACCTTATTGTaGAGGACCCTCCAAAATCTT +
Preference number: 2 (lower is better)
Translates to: GLTICRKGTKIHHATRSFALTLL*RTLQNL
Trigger: AAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGC...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCAAAGCACCAAGTACGTaGGTAGCTTATATCCTACAG +
Preference number: 2 (lower is better)
Translates to: GLTICRKGTKIHHATRSFKAPST*VAYILQ
Trigger: CTGTAGGATATAAGCTACCCACGTACTTGGTGCTTT...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR TCA 72 bp AGCAGGTCACCCAGGAGACTGACCGGGCCCCGATTCTaGAGACATTCTGCAGGGGGAGCTAATGGCAACTTG +
Preference number: 3 (lower is better)
Translates to: SRSPRRLTGPRF*RHSAGGANGNL
Trigger: CAAGTTGCCATTAGCTCCCCCTGCAGAATGTCTTCAGAATCGGGGCCCGGTCAGTCTCCTGGGTGACCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 72 bp CCCTGGGACCCTCTAAAGCACTGTGCAAAATCCTTGTaGCCACCCTCCCCTAAGGTCTCCACTGGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: PWDPLKHCAKSL*PPSPKVSTGSE
Trigger: TTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGGATTTTGCACAGTGCTTTAGAGGGTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 72 bp TGGCAACTTGGGGCAAGTCTGATTCTCACTCAGAACTaGTCCCAAACCCCCATCCTCATGTCGAGCCAAGAC +
Preference number: 3 (lower is better)
Translates to: WQLGASLILTQN*SQTPILMSSQD
Trigger: GTCTTGGCTCGACATGAGGATGGGGGTTTGGGACCAGTTCTGAGTGAGAATCAGACTTGCCCCAAGTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR GCA 72 bp GGAGGAATAAGGCACCAAGAAGTAAGTCGATGTCGATaGTGTCCCCCTTGTATCACAGTGTGCAGACATGGG +
Preference number: 3 (lower is better)
Translates to: GGIRHQEVSRCR*CPPCITVCRHG
Trigger: CCCATGTCTGCACACTGTGATACAAGGGGGACAGCATCGACATCGACTTACTTCTTGGTGCCTTATTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 72 bp GGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTaGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGC +
Preference number: 3 (lower is better)
Translates to: GKRLPSLALTLL*RTLQNLQLCTS
Trigger: GCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR CCA 72 bp ATGGTGGCTACAGCTACAAAGGCTCCTGTGGGAAACTaGATTGTCAAGCAGGGGAGGAAGAAAGGAACCAAC +
Preference number: 3 (lower is better)
Translates to: MVATATKAPVGN*IVKQGRKKGTN
Trigger: GTTGGTTCCTTTCTTCCTCCCCTGCTTGACAATCCAGTTTCCCACAGGAGCCTTTGTAGCTGTAGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 72 bp TCTGAAGACATTCTGCAGGGGGAGCTAATGGCAACTTaGGGCAAGTCTGATTCTCACTCAGAACTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: SEDILQGELMAT*GKSDSHSELVP
Trigger: TGGGACCAGTTCTGAGTGAGAATCAGACTTGCCCCAAGTTGCCATTAGCTCCCCCTGCAGAATGTCTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CAA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCACTGGCATTGACCTTATaGTGGAGGACCCTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPLALTL*WRTLQN
Trigger: ATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAG...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR GCA 72 bp AGTCGATGTCGATGCTGTCCCCCTTGTATCACAGTGTaGAGACATGGGTTGAGCTTCTTCCAAACAAGAGCT +
Preference number: 3 (lower is better)
Translates to: SRCRCCPPCITV*RHGLSFFQTRA
Trigger: AGCTCTTGTTTGGAAGAAGCTCAACCCATGTCTGCACACTGTGATACAAGGGGGACAGCATCGACATCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 72 bp TGTCAAGCAGGGGAGGAAGAAAGGAACCAACTCTGTTaGGTGCTTGCTTATTTAGGAAGCTCTGTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CQAGEEERNQLC*VLAYLGSSVLD
Trigger: GTCCAGCACAGAGCTTCCTAAATAAGCAAGCACTCAACAGAGTTGGTTCCTTTCTTCCTCCCCTGCTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CCA 72 bp TATACATGTAGGTCAGAAAGTCCTTCGGGCCAGAGATaGCAAAGATACCCACGTTGGAACTACAGGGGGAAA +
Preference number: 3 (lower is better)
Translates to: YTCRSESPSGQR*QRYPRWNYRGK
Trigger: TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACTTTCTGACCTACATGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 72 bp TCTCTTCCACCATGTATCACCCAGGCCTCTAGTGTCTaGACCTTCTCTGGTTGCAAATTATGGACTTCCACA +
Preference number: 3 (lower is better)
Translates to: SLPPCITQASSV*TFSGCKLWTST
Trigger: TGTGGAAGTCCATAATTTGCAACCAGAGAAGGTTCAGACACTAGAGGCCTGGGTGATACATGGTGGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR GCA 72 bp GGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTaGTGCAGTCCTTTCTCCAGTCTGGGCAAGATTGAT +
Preference number: 3 (lower is better)
Translates to: GKPFSRILKQGC*CSPFSSLGKID
Trigger: ATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR TCA 72 bp CCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTaGGTCATGTATGATGACATAAACCACAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: PPKSSALHQQVC*VMYDDINHKES
Trigger: TGACTCCTTGTGGTTTATGTCATCATACATGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR TCA 72 bp TGCTGTTTTTGTCAAAGATTTTACTGCGGGATCCATTaGGCATCACATGGACCACATCACAGGCAGCTTCTG +
Preference number: 3 (lower is better)
Translates to: CCFCQRFYCGIH*ASHGPHHRQLL
Trigger: CAGAAGCTGCCTGTGATGTGGTCCATGTGATGCTCAATGGATCCCGCAGTAAAATCTTTGACAAAAACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR CCA 72 bp GAAATAATACCAACCTCACAGCACTGTTGGAAGGGTTaGGGTAAAGCACCAAGTACGTGGGTAGCTTATATC +
Preference number: 3 (lower is better)
Translates to: EIIPTSQHCWKG*GKAPSTWVAYI
Trigger: GATATAAGCTACCCACGTACTTGGTGCTTTACCCCAACCCTTCCAACAGTGCTGTGAGGTTGGTATTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR CAA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGCTTCCGTCTCTGGCATaGACCTTATTGTGGAGGACC +
Preference number: 3 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRLPSLA*TLLWRT
Trigger: GGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAG...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR CAA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACAACTGAAACAGGGTTGTaGCTGCAGTCCTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTTETGL*LQSFLQ
Trigger: CTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGT...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR TCA 72 bp TTCCATAGTTTCCACCGCCTTGCGCTACTTGCATTCTaGTTAGAGAATGGTAATGTGTGCCTCTCTGAATCA +
Preference number: 3 (lower is better)
Translates to: FHSFHRLALLAF*LENGNVCLSES
Trigger: TGATTCAGAGAGGCACACATTACCATTCTCTAATCAGAATGCAAGTAGCGCAAGGCGGTGGAAACTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR GCA 72 bp AGGGGAGGAAGAAAGGAACCAACTCTGTTGAGTGCTTaGTTATTTAGGAAGCTCTGTGCTGGACTCAATTTT +
Preference number: 3 (lower is better)
Translates to: RGGRKEPTLLSA*LFRKLCAGLNF
Trigger: AAAATTGAGTCCAGCACAGAGCTTCCTAAATAAGCAAGCACTCAACAGAGTTGGTTCCTTTCTTCCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR GCA 72 bp AAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTGGGCAAGATTGATAGT +
Preference number: 3 (lower is better)
Translates to: KPFSRILKQGCC*SPFSSLGKIDS
Trigger: ACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR CAA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCTTACTGCGGGATCCATaGAGCATCACATGGACCACA +
Preference number: 3 (lower is better)
Translates to: GLTICRKGTKIHHATRSFLLRDP*SITWTT
Trigger: TGTGGTCCATGTGATGCTCAATGGATCCCGCAGTAA...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502843.5
3UTR-3UTR CAA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGAAAATAATTGTGGTTTaGCCATTCCTTTCGGTGGCA +
Preference number: 3 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKKIIVV*PFLSVA
Trigger: TGCCACCGAAAGGAATGGCAAAACCACAATTATTTT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 72 bp GAAAGTTGGGATGGTAAGAGAATTTTCTACAGCAAATaGGAATGGAGTAGGCAGACAGGGAGTAGTAGATTT +
Preference number: 3 (lower is better)
Translates to: ESWDGKRIFYSK*EWSRQTGSSRF
Trigger: AAATCTACTACTCCCTGTCTGCCTACTCCATTCTCATTTGCTGTAGAAAATTCTCTTACCATCCCAACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR-3UTR CAA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCCATGAAGTTTATGGTTaGACTATCTGTAGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: GLTICRKGTKIHHATRSFHEVYG*TICRKG
Trigger: ACCCTTCCTACAGATAGTCAAACCATAAACTTCATG...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR-3UTR CAA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTTTCACTTTTCTTCACTaGCCTGTTCTAATAAGAGAG +
Preference number: 3 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSFTFLH*PVLIRE
Trigger: CTCTCTTATTAGAACAGGCAAGTGAAGAAAAGTGAA...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR TCA 72 bp AGTACTTACCACATTTTAAGTTTTGTAATCCTTATTTaGGTGGCAAGGAAGTTGAAGTTCAGAAAGGTTAGG +
Preference number: 3 (lower is better)
Translates to: STYHILSFVILI*VARKLKFRKVR
Trigger: CCTAACCTTTCTGAACTTCAACTTCCTTGCCACTCAAATAAGGATTACAAAACTTAAAATGTGGTAAGTACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCCCCGGACCGCTCCACTaGTGGCGCCACCTCGGGACG +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSPGPLH*WRHLGT
Trigger: CGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGG...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGGCAGGAGAATGGCGTaGACCCCAGGGGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKGRRMA*TPGGGA
Trigger: GGCTCCACCCCCTGGGGTTCACGCCATTCTCCTGCC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAGGACCGCTCCACTGCTaGCGCCACCTCGGGACGACC +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPGPLHC*RHLGTT
Trigger: GGTCGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCC...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR GCA 90 bp GGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTGCAGTCCTTTCTCCCCCGGACCGCTCCACTaGTGGCGCCACCTCGGGACG +
Preference number: 4 (lower is better)
Translates to: GKPFSRILKQGCCCSPFSPGPLH*WRHLGT
Trigger: CGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGG...GGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCACCAGGCGGGGTTGGCTaGGCGAAGATGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPPGGVG*AKMRPA
Trigger: TGCCGGCCTCATCTTCGCCCAGCCAACCCCGCCTGG...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAGGCTCCAGGCGGGGTTaGCTGGGCGAAGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESGSRRG*LGEDEA
Trigger: GGCCTCATCTTCGCCCAGCCAACCCCGCCTGGAGCC...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAATCTCGGGAAAGCGCTTaGTGGTGCCCGGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQSRESA*WCPDRS
Trigger: GGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGA...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCATTGGCTGGGCGAAGATaGGGCCGGCAGGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESLAGRR*GRQEAR
Trigger: CCTAGCCTCCTGCCGGCCTCATCTTCGCCCAGCCAA...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACGGGTGGAGCCTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHGWSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAGGCTCCACCC...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAGAGATGGCGGGCGCCTaGAGTCCCAGCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQEMAGA*SPSYLG
Trigger: TCCCAAGTAGCTGGGACTGCAGGCGCCCGCCATCTC...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTGGGACCGCTCCACTGCTaGCGCCACCTCGGGACGACC +
Preference number: 4 (lower is better)
Translates to: SANLRETVFQNTETGLLLGPLHC*RHLGTT
Trigger: GGTCGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCC...CAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCGCGTGTCCTCCAGGGTaGACATGTCCCGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCACPPG*TCPAGP
Trigger: AGGTCCAGCGGGACATGTTCACCCTGGAGGACACGC...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCGAAAGCGCTTGGTGGTaGCCGGACCGCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCESAWW*PDRSTA
Trigger: AGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTC...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR GCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCCTCGGCCTCCCAAAGTaGTGGGGATACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSLGLPK*WGYRCE
Trigger: CTCACACCTGTATCCCCAGCACTTTGGGAGGCCGAG...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGACGCCAAGACAGAGTTaGGCTCTCCTAGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGTPRQS*ALLESR
Trigger: CCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGT...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCGGGAAAGCGCTTGGTaGTGCCCGGACCGCTCCACT +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHRESAW*CPDRST
Trigger: AGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCG...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAATCTCGGGAAAGCGCTTaGTGGTGCCCGGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: GVKELKQPQRLAQISDVQSRESA*WCPDRS
Trigger: GGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGA...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAACACTGCACTCTAGCCTaGGCGACAGCGAGACTCCGT +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQHCTLA*ATARLR
Trigger: ACGGAGTCTCGCTGTCGCCCAGGCTAGAGTGCAGTG...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 72 bp GATGTGGCCCAGGCAGCCACTTCAAGGGGTATCCTGTaGAGCAAGGACTCGATGAGTCCCGAAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: DVAQAATSRGIL*SKDSMSPESSN
Trigger: GTTGCTGCTTTCGGGACTCATCGAGTCCTTGCTCAACAGGATACCCCTTGAAGTGGCTGCCTGGGCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGGCAGCACCTCTCAGCTaGCTACTGAGTTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGAAPLS*LLSSWW
Trigger: CCACCAAGAACTCAGTAGGCAGCTGAGAGGTGCTGC...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp CATAAACCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCCGGGAAAGCGCTTGGTaGTGCCCGGACCGCTCCACT +
Preference number: 4 (lower is better)
Translates to: HKPQGVKELKQPQRLAQIRESAW*CPDRST
Trigger: AGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCG...GATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGGTTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACTTGGCTGGGCGAAGATaGGGCCGGCAGGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDLAGRR*GRQEAR
Trigger: CCTAGCCTCCTGCCGGCCTCATCTTCGCCCAGCCAA...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AGCATCACATGGACCACATCACAGGCAGCTTCTGCAAACCTGCGGGAAACCGTTGAATTTCAGTGTACTTaGCGCATCGCGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: SITWTTSQAASANLRETVEFQCT*RIAPGR
Trigger: CCGTCCTGGCGCGATGCGTCAAGTACACTGAAATTC...AACGGTTTCCCGCAGGTTTGCAGAAGCTGCCTGTGATGTGGTCCATGTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGGAAGAATCCCTGGACTaGCCATGGTGGCTACAGCTA +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGEESLD*PWWLQL
Trigger: TAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTC...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGTGTGCAAAATCCTTGTaGCCACCCTCCCCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGCAKSL*PPSPKV
Trigger: GACCTTAGGGGAGGGTGGTCACAAGGATTTTGCACA...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGCCACTTTTCAGCCAATaGTGGCCCAAACAGTGGACC +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGPLFSQ*WPKQWT
Trigger: GGTCCACTGTTTGGGCCATCATTGGCTGAAAAGTGG...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp CCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATAGGCTGGCTGGGTTCTaGAACTGCACCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQGVKELKQPQRLAQISDRLAGF*NCTSPS
Trigger: AGAAGGGGAGGTGCAGTTTCAGAACCCAGCCAGCCT...ATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAATACTGCGGGATCCATTaGGCATCACATGGACCACAT +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKYCGIH*ASHGPH
Trigger: ATGTGGTCCATGTGATGCTCAATGGATCCCGCAGTA...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAACAGGCCTCTAGTGTCTaGACCTTCTCTGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKQASSV*TFSGCK
Trigger: TTTGCAACCAGAGAAGGTTCAGACACTAGAGGCCTG...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAATGTGCTTTGTGTGGGTaGGCTAAGGCCAAGCTAATC +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQCALCG*AKAKLI
Trigger: GATTAGCTTGGCCTTAGCTCACCCACACAAAGCACA...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCCCTTGTATCACAGTGTaGAGACATGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSPCITV*RHGLSF
Trigger: GAAGCTCAACCCATGTCTGCACACTGTGATACAAGG...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCGTAAGTCGATGTCGATaGTGTCCCCCTTGTATCACA +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSVSRCR*CPPCIT
Trigger: TGTGATACAAGGGGGACAGCATCGACATCGACTTAC...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TGCAAGATGAATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCTGTCCAGGCGGGGTTGGCTaGGCGAAGATGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CKMNPQDFSHTEETCQVCPGGVG*AKMRPA
Trigger: TGCCGGCCTCATCTTCGCCCAGCCAACCCCGCCTGG...ACAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAAACAACCACAGCGACTaGCTCAGATCTCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKNNHSD*LRSQMC
Trigger: GCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTT...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAACTAGTGAAGAATCCCTaGACTGACCATGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKLVKNP*TDHGGY
Trigger: GTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAG...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACACCTCTGTGGCTCCCTaGGACCCTCTAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHTSVAP*DPLKHC
Trigger: ACAGTGCTTTAGAGGGTCCCAGGGAGCCACAGAGGT...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAACATTCCCACAGCCTTTaGGTAAGCATGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQHSHSL*VSMMVG
Trigger: ACCCACCATCATGCTTACCCAAAGGCTGTGGGAATG...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGCACAGTGTGCAGACATaGGTTGAGCTTCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGHSVQT*VELLPN
Trigger: GTTTGGAAGAAGCTCAACCCATGTCTGCACACTGTG...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGCGTTTTCCAGAATACTaGAACAGGGTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGRFPEY*NRVVAA
Trigger: TGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACG...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACTTCCGTCTCTGGCATTaGCCTTATTGTGGAGGACCC +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHFRLWH*PYCGGP
Trigger: GGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAA...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGACCGGGCCCCGATTCTaGAGACATTCTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKTGPRF*RHSAGG
Trigger: TCCCCCTGCAGAATGTCTTCAGAATCGGGGCCCGGT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAATGTGCAGACATGGGTTaGGCTTCTTCCAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKCADMG*ASSKQE
Trigger: CTCTTGTTTGGAAGAAGCTCAACCCATGTCTGCACA...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCCTCTCAGCTGCCTACTaGGTTCTTGGTGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCLSAAY*VLGGLL
Trigger: AAGCAATCCACCAAGAACTCAGTAGGCAGCTGAGAG...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQKQGCC*SPFSSL
Trigger: CAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTT...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACGTGATCACAGCTCCCTaGAGCCTCAACCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDVITAP*SLNLPS
Trigger: GCTTGGGAGGTTGAGGCTGCAGGGAGCTGTGATCAC...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp CCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATAAGAGAGAGGCTGGCTaGGTTCTGAAACTGCACCTC +
Preference number: 4 (lower is better)
Translates to: PQGVKELKQPQRLAQISDKREAG*VLKLHL
Trigger: GAGGTGCAGTTTCAGAACCCAGCCAGCCTCTCTCTT...ATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAACAGCAAGAGAGAGGCTaGCTGGGTTCTGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: GVKELKQPQRLAQISDVQQQERG*LGSETA
Trigger: TGCAGTTTCAGAACCCAGCCAGCCTCTCTCTTGCTG...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACGAATTTCAGTGTACTTaGCGCATCGCGCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDEFQCT*RIAPGR
Trigger: CCGTCCTGGCGCGATGCGTCAAGTACACTGAAATTC...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTCTCATCTCAGGATaGATTTCAGTGTACTTGACG +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSCLISG*ISVYLT
Trigger: CGTCAAGTACACTGAAATTCATCCTGAGATGAGACA...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAATTGCAAGGTACGGTCTaGGTTCCCAACTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKLQGTV*VPNFIS
Trigger: ACTAATGAAGTTGGGAACTCAGACCGTACCTTGCAA...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAACTTGGGGCAAGTCTaGTTCTCACTCAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPNLGQV*FSLRTG
Trigger: ACCAGTTCTGAGTGAGAATCAGACTTGCCCCAAGTT...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCACCAGCTCTTTTATGGTaGGATCCTGGCATAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESPALLW*DPGISL
Trigger: GAGACTTATGCCAGGATCCCACCATAAAAGAGCTGG...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCCCAGCTCTTTTATGGTaGGATCCTGGCATAAGTCTC +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCPALLW*DPGISL
Trigger: GAGACTTATGCCAGGATCCCACCATAAAAGAGCTGG...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCGAGCTAATGGCAACTTaGGGCAAGTCTGATTCTCAC +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCELMAT*GKSDSH
Trigger: GTGAGAATCAGACTTGCCCCAAGTTGCCATTAGCTC...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 72 bp GCACCAAGAAGTAAGTCGATGTCGATGCTGTCCCCCTaGTATCACAGTGTGCAGACATGGGTTGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: APRSKSMSMLSP*YHSVQTWVELL
Trigger: AAGAAGCTCAACCCATGTCTGCACACTGTGATACAAGGGGGACAGCATCGACATCGACTTACTTCTTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
3UTR CAA 72 bp CTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTaGTTGCTGCAGTCCTTTCTCCAGTCTGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LRETVFQNTETG*LLQSFLQSGQD
Trigger: ATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp CATAAACCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTACTGCGGGATCCATTaGGCATCACATGGACCACAT +
Preference number: 4 (lower is better)
Translates to: HKPQGVKELKQPQRLAQIYCGIH*ASHGPH
Trigger: ATGTGGTCCATGTGATGCTCAATGGATCCCGCAGTA...GATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGGTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGATTTTCTACAGCAAATaGGAATGGAGTAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKIFYSK*EWSRQT
Trigger: TGTCTGCCTACTCCATTCTCATTTGCTGTAGAAAAT...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGGCTCTGCCAGTTACATaGGAGACGTGGACATGGCAC +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKALPVT*ETWTWH
Trigger: GTGCCATGTCCACGTCTCTCATGTAACTGGCAGAGC...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAACTCAGATCTCAGATGTaGAAGATGAATCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKLRSQM*KMNPQD
Trigger: ATCCTGAGGATTCATCTTGCACATCTGAGATCTGAG...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AGCATCACATGGACCACATCACAGGCAGCTTCTGCAAACCTGCGGGAAACCGTTCTCAGATCTCAGATGTaGAAGATGAATCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SITWTTSQAASANLRETVLRSQM*KMNPQD
Trigger: ATCCTGAGGATTCATCTTGCACATCTGAGATCTGAG...AACGGTTTCCCGCAGGTTTGCAGAAGCTGCCTGTGATGTGGTCCATGTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR GCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGTGTATGCAGTCATATaGACTTACGTATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKVYAVI*TYVCVC
Trigger: ACACACACATACGTAAGTGCATATGACTGCATACAC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAAGACCTACTGGATGCTaGAATTACTGTGGATTGAGA +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKRPTGC*NYCGLR
Trigger: TCTCAATCCACAGTAATTGCAGCATCCAGTAGGTCT...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCACCTGGCATAAGTCTCTaGAATCTTCTCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPPGISL*NLLFHH
Trigger: ATGGTGGAAGAGAAGATTCCAGAGACTTATGCCAGG...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAATTCCAGCTCTTTTATaGTGGGATCCTGGCATAAGT +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKIPALL*WDPGIS
Trigger: ACTTATGCCAGGATCCCACCATAAAAGAGCTGGAAT...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGGCTCCTGTGGGAAACTaGATTGTCAAGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKAPVGN*IVKQGR
Trigger: CCTCCCCTGCTTGACAATCCAGTTTCCCACAGGAGC...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGGCTGAGGCAGGAGAATaGCGTGAACCCCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRAEAGE*REPQGV
Trigger: CACCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGC...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACTTGCAAGGTACGGTCTaGGTTCCCAACTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHLQGTV*VPNFIS
Trigger: ACTAATGAAGTTGGGAACTCAGACCGTACCTTGCAA...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAGGATTTTTCACACACTaGAGAAACTTGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESGFFTH*RNLSGL
Trigger: CAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCC...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGTTCCGTCTCTGGCATTaGCCTTATTGTGGAGGACCC +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKFRLWH*PYCGGP
Trigger: GGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAA...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTGGTCACCCAGGAGACTaGCCGGGCCCCGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSGHPGD*PGPDSE
Trigger: TTCAGAATCGGGGCCCGGTCAGTCTCCTGGGTGACC...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGCCTAGGAGGAATAGGTaGTACCATGTAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKPRRNR*YHVAWV
Trigger: CACCCAGGCTACATGGTATCACCTATTCCTCCTAGG...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCGCGCTACTTGCATTCTaGTTAGAGAATGGTAATGTG +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCALLAF*LENGNV
Trigger: CACATTACCATTCTCTAATCAGAATGCAAGTAGCGC...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTGAAAGCGCTTGGTGGTaGCCGGACCGCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSESAWW*PDRSTA
Trigger: AGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTC...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAAAAGAAGAATCTTGTTaGAAGGTACGGTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQKEESC*KVRSEF
Trigger: GAACTCAGACCGTACCTTGCAACAAGATTCTTCTTT...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp TCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTGCTGAAACAGGGTTGTTaGTGCAGTCCTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SANLRETVFQNTETGLLLLKQGC*CSPFSS
Trigger: ACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAG...CAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR GCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAGTAAGACCTACTGGATaGTGCAATTACTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESVRPTG*CNYCGL
Trigger: CAATCCACAGTAATTGCAGCATCCAGTAGGTCTTAC...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCCGAGATCGCGCCACTaGACTCTAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSPRSRH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGCGCGATCTCGG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAATTCCAGCTCTTTTATaGTGGGATCCTGGCATAAGT +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPIPALL*WDPGIS
Trigger: ACTTATGCCAGGATCCCACCATAAAAGAGCTGGAAT...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAAAAGCACCAAGTACGTaGGTAGCTTATATCCTACAG +
Preference number: 4 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESKAPST*VAYILQ
Trigger: CTGTAGGATATAAGCTACCCACGTACTTGGTGCTTT...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCGAAAAACATGTGTTTTaGAGCCATCCAGAAGAACTA +
Preference number: 4 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSEKHVF*SHPEEL
Trigger: TAGTTCTTCTGGATGGCTCCAAAACACATGTTTTTC...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGTTTTCTGTGCAGTATaGAATCTTCCTGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKVFCAV*NLPEKL
Trigger: AAGTTTCTCAGGAAGATTCCATACTGCACAGAAAAC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGATTCACCACACCATGTaGGGTCATCAGCAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKIHHTM*GHQQGS
Trigger: GCTACCTTGCTGATGACCTCACATGGTGTGGTGAAT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTGCAGTCCTTTCTCCCGTTTTCCAGAATACTaGAACAGGGTTGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GKPFSRILKQGCCCSPFSRFPEY*NRVVAA
Trigger: TGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACG...GGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp GCAGCTTCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGGGATTTTTCACACACTaGAGAAACTTGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AASANLRETVFQNTETGLGFFTH*RNLSGL
Trigger: CAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCC...CAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGAAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAGAAGGAAAAAGCACATaGATTTTGGAGTTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPEGKST*ILELDR
Trigger: TCTGTCCAACTCCAAAATTCATGTGCTTTTTCCTTC...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAACATGATGTCAAAATATaGATCCAGAAATGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKHDVKI*IQKCLT
Trigger: AGTCAGGCATTTCTGGATTCATATTTTGACATCATG...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACCCCTCTAAAGCACTGTaGAAAATCCTTGTGACCACC +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDPSKAL*KILVTT
Trigger: GGTGGTCACAAGGATTTTGCACAGTGCTTTAGAGGG...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCAAGTTCAAGAATAAATaGCCTATCCTGGCTAACACG +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCKFKNK*PILANT
Trigger: CGTGTTAGCCAGGATAGGGCATTTATTCTTGAACTT...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCACGCCAAGACAGAGTTaGGCTCTCCTAGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLTICRKGTKIHHATRSFTPRQS*ALLESR
Trigger: CCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGT...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGTCTGAACCTTCTCTaGTTGCAAATTATGGACTTC +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCCLNLL*LQIMDF
Trigger: GAAGTCCATAATTTGCAACCAGAGAAGGTTCAGACA...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGAGTCTCCAGAGTAGCTaGGACTACAGGTGCACAACA +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKSLQSS*DYRCTT
Trigger: TGTTGTGCACCTGTAGTCCCAGCTACTCTGGAGACT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACCTACAAAGGCTCCTGTaGGAAACTGGATTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDLQRLL*ETGLSS
Trigger: GCTTGACAATCCAGTTTCCCACAGGAGCCTTTGTAG...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACTGGACCTGTGTGAACTaGTGGGCCAGATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDWTCVN*WARSFI
Trigger: AATAAAAGATCTGGCCCATCAGTTCACACAGGTCCA...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGCCGCCTTGCGCTACTTaGATTCTGATTAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKPPCAT*ILIREW
Trigger: CCATTCTCTAATCAGAATGCAAGTAGCGCAAGGCGG...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAAGTCCTTTCTCCAGTCTaGGCAAGATTGATAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GVKELKQPQRLAQISDVQVLSPV*ARLIVY
Trigger: ATAAACTATCAATCTTGCCCAGACTGGAGAAAGGAC...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACTCTGGTTGCAAATTATaGACTTCCACACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHSGCKL*TSTLPK
Trigger: TTTTGGGAGTGTGGAAGTCCATAATTTGCAACCAGA...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAATCTGGTTGCAAATTATaGACTTCCACACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GVKELKQPQRLAQISDVQSGCKL*TSTLPK
Trigger: TTTTGGGAGTGTGGAAGTCCATAATTTGCAACCAGA...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp CCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATTGTCTGAACCTTCTCTaGTTGCAAATTATGGACTTC +
Preference number: 4 (lower is better)
Translates to: PQGVKELKQPQRLAQISDCLNLL*LQIMDF
Trigger: GAAGTCCATAATTTGCAACCAGAGAAGGTTCAGACA...ATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp CATAAACCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCGCATTGACCTTATTGTaGAGGACCCTCCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: HKPQGVKELKQPQRLAQIALTLL*RTLQNL
Trigger: AAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGC...GATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CCA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAAAACTACTATTAGTTTaGTATGAAAGGCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQKLLLV*YERPRR
Trigger: CCTTCTAGGCCTTTCATACCAAACTAATAGTAGTTT...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCAGGCCAGAGTGCAGTaGTGTGATCACAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSQARVQ*CDHSSL
Trigger: CAGGGAGCTGTGATCACACCACTGCACTCTGGCCTG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGCAAAGATACCCACGTTaGAACTACAGGGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKQRYPR*NYRGKG
Trigger: TCCTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTG...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGCCTTCGGGCCAGAGATaGCAAAGATACCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRPSGQR*QRYPRW
Trigger: CCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGG...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCCTGCGGGAAAATATCTaGATTAGCAATGTGTTGATA +
Preference number: 4 (lower is better)
Translates to: DLIVEDPPKSSALHQQVCLRENI*ISNVLI
Trigger: TATCAACACATTGCTAATCCAGATATTTTCCCGCAG...GCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTACCCGCTGGACCTGTGTaGACTGATGGGCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVPAGPV*TDGPDL
Trigger: AAGATCTGGCCCATCAGTTCACACAGGTCCAGCGGG...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACACCATTGAGCATCACATaGACCACATCACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTPLSIT*TTSQAA
Trigger: AGCTGCCTGTGATGTGGTCCATGTGATGCTCAATGG...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGGGAGTTGGACAGAGTTaGGTTCAAATTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKGVGQS*VQIQSL
Trigger: TAGAGACTGAATTTGAACTCAACTCTGTCCAACTCC...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACAAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTKQGCC*SPFSSL
Trigger: CAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTT...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR GCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTTCACTCAGGCCAGAGTaGAGTGGTGTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSSLRPE*SGVITA
Trigger: AGCTGTGATCACACCACTGCACTCTGGCCTGAGTGA...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCAACAACCACAGCGACTaGCTCAGATCTCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: GLTICRKGTKIHHATRSFNNHSD*LRSQMC
Trigger: GCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTT...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACATGAAGTTTATGGTTTaGCTATCTGTAGGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDMKFMV*LSVGRV
Trigger: TACCCTTCCTACAGATAGTCAAACCATAAACTTCAT...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCCCACTGTTGGCATATaGTGTATGCAGGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSPTVGI*CMQACV
Trigger: CACACAAGCCTGCATACATCATATGCCAACAGTGGG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCCATTGAGCATCACATaGACCACATCACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSPLSIT*TTSQAA
Trigger: AGCTGCCTGTGATGTGGTCCATGTGATGCTCAATGG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACACCTGGCATAAGTCTCTaGAATCTTCTCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTPGISL*NLLFHH
Trigger: ATGGTGGAAGAGAAGATTCCAGAGACTTATGCCAGG...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp CTTATAATCGATTCCAGCTCTTTTATGGTGGGATCCTGGCATAAGTCTCTGGAAAAAGCACCAAGTACGTaGGTAGCTTATATCCTACAG +
Preference number: 4 (lower is better)
Translates to: LIIDSSSFMVGSWHKSLEKAPST*VAYILQ
Trigger: CTGTAGGATATAAGCTACCCACGTACTTGGTGCTTT...TTCCAGAGACTTATGCCAGGATCCCACCATAAAAGAGCTGGAATCGATTATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTACAGGCCTCTAGTGTCTaGACCTTCTCTGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVQASSV*TFSGCK
Trigger: TTTGCAACCAGAGAAGGTTCAGACACTAGAGGCCTG...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGCACCAGCAGGTATGCTaGGTCATGTATGATGACATA +
Preference number: 4 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRHQQVC*VMYDDI
Trigger: TATGTCATCATACATGACTCAGCATACCTGCTGGTG...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR GCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCAATAAACTCGCCCAATaGATCACCTGCCTCCGAATT +
Preference number: 4 (lower is better)
Translates to: GLTICRKGTKIHHATRSFNKLAQ*ITCLRI
Trigger: AATTCGGAGGCAGGTGATGCATTGGGCGAGTTTATT...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp TGCAAGATGAATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCTGTCCCTTCTGTTTCACTTaGCTTTTCTCTGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: CKMNPQDFSHTEETCQVCPFCFT*LFSVSL
Trigger: AAGGGAAACAGAGAAAAGGCAAGTGAAACAGAAGGG...ACAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR TCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACATCCATCTCAAGAAGCTaGATACGTAAATCTACCCAA +
Preference number: 4 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTSISRS*IRKSTQ
Trigger: TTGGGTAGATTTACGTATTCAGCTTCTTGAGATGGA...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTACTGAAACAGGGTTGTTaGTGCAGTCCTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVLKQGC*CSPFSS
Trigger: ACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAG...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR TCA 90 bp TGCAAGATGAATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCTGTATGAAGTTTATGGTTTaGCTATCTGTAGGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: CKMNPQDFSHTEETCQVCMKFMV*LSVGRV
Trigger: TACCCTTCCTACAGATAGTCAAACCATAAACTTCAT...ACAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR GCA 90 bp TGCAAGATGAATCCTCAGGATTTTTCACACACTGAAGAAACTTGTCAGGTCTGTCCACACTCCCAAAAGTaGTGTTTTTGTCAAAGATTT +
Preference number: 4 (lower is better)
Translates to: CKMNPQDFSHTEETCQVCPHSQK*CFCQRF
Trigger: AAATCTTTGACAAAAACAGCACTTTTGGGAGTGTGG...ACAGACCTGACAAGTTTCTTCAGTGTGTGAAAAATCCTGAGGATTCATCTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR GCA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACAAGAGAAAATATAAGCTaGCAGTACCAGCAACAAGTA +
Preference number: 4 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTRENIS*QYQQQV
Trigger: TACTTGTTGCTGGTACTGGCAGCTTATATTTTCTCT...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAGTGTGTGTGGGTGTATaGAGTCATATGCACTTACGT +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVVCVGV*SHMHLR
Trigger: ACGTAAGTGCATATGACTGCATACACCCACACACAC...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGGAGAATGGTAATGTGTaGCTCTCTGAATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRENGNV*LSESSS
Trigger: TGAACTTGATTCAGAGAGGCACACATTACCATTCTC...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATGCTGCAATTACTGTaGATTGAGAGACACTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLTICRKGTKIHHATRSFMLQLL*IERHCC
Trigger: ACAACAGTGTCTCTCAATCCACAGTAATTGCAGCAT...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTGTCCTTTCTCCAGTCTaGGCAAGATTGATAGTTTAT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSVLSPV*ARLIVY
Trigger: ATAAACTATCAATCTTGCCCAGACTGGAGAAAGGAC...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCGTTATTTTAAGACTTTaGGGAAAAAGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GLTICRKGTKIHHATRSFVILRL*GKRLPS
Trigger: AGACGGAAGCCTTTTTCCCCAAAGTCTTAAAATAAC...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR CAA 72 bp TTCACCAACATGACCCATGACCATGAAGTTTATGGTTaGACTATCTGTAGGAAGGGTACAAAAATACATCAT +
Preference number: 4 (lower is better)
Translates to: FTNMTHDHEVYG*TICRKGTKIHH
Trigger: ATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
3UTR CAA 72 bp AAAGTAAGACCTACTGGATGCTGCAATTACTGTGGATaGAGAGACACTGTTGTTGTAACAGGAAAGTATATA +
Preference number: 4 (lower is better)
Translates to: KVRPTGCCNYCG*RDTVVVTGKYI
Trigger: TATATACTTTCCTGTTACAACAACAGTGTCTCTCAATCCACAGTAATTGCAGCATCCAGTAGGTCTTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR TCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTATTGTGGTCATTCCCTaGAGGAGTCTCAAATTAATT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSIVVIP*RSLKLI
Trigger: AATTAATTTGAGACTCCTTCAGGGAATGACCACAAT...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTCCACACTCCCAAAAGTaGTGTTTTTGTCAAAGATTT +
Preference number: 4 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSPHSQK*CFCQRF
Trigger: AAATCTTTGACAAAAACAGCACTTTTGGGAGTGTGG...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR GCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAACTCTGTTGAGTGCTTaGTTATTTAGGAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVTLLSA*LFRKLC
Trigger: ACAGAGCTTCCTAAATAAGCAAGCACTCAACAGAGT...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAGTTATTTTAAGACTTTaGGGAAAAAGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVVILRL*GKRLPS
Trigger: AGACGGAAGCCTTTTTCCCCAAAGTCTTAAAATAAC...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CCA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAATTTTCAATAAATTGTaGTCATTCCCTGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVIFNKL*SFPEGV
Trigger: GACTCCTTCAGGGAATGACCACAATTTATTGAAAAT...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS GCA 90 bp AGGACGGTCTCGGGAAAGCGCTTGGTGGTGCCCGGACCGCTCCACTaGTGGCGCCACCTCGGGACGACCACCGCGAGCACCACGACGAGG +
Preference number: 5 (lower is better)
Translates to: RTVSGKRLVVPGPLH*WRHLGTTTASTTTR
Trigger: CCTCGTCGTGGTGCTCGCGGTGGTCGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CCA 90 bp ACGGTCTCGGGAAAGCGCTTGGTGGTGCCCGGACCGCTCCACTGCTaGCGCCACCTCGGGACGACCACCGCGAGCACCACGACGAGGATC +
Preference number: 5 (lower is better)
Translates to: TVSGKRLVVPGPLHC*RHLGTTTASTTTRI
Trigger: GATCCTCGTCGTGGTGCTCGCGGTGGTCGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CCA 90 bp ACCACGACGAGGATCAGGACCAGGATACTGACGCCAAGACAGAGTTaGGCTCTCCTAGAGAGCCGGCAGCAGGGTTTGTCCCCGGACACC +
Preference number: 5 (lower is better)
Translates to: TTTRIRTRILTPRQS*ALLESRQQGLSPDT
Trigger: GGTGTCCGGGGACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGTCAGTATCCTGGTCCTGATCCTCGTCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS-3UTR CAA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAGTCTCGGGAAAGCGCTaGGTGGTGCCCGGACCGCTC +
Preference number: 5 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQVSGKR*VVPGPL
Trigger: GAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGAC...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACAGCCGGCAGCAGGGTTaGTCCCCGGACACCGGGCTG +
Preference number: 5 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHSRQQG*SPDTGL
Trigger: CAGCCCGGTGTCCGGGGACAAACCCTGCTGCCGGCT...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp GCAGCTTCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGAGCCGGCAGCAGGGTTaGTCCCCGGACACCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AASANLRETVFQNTETGLSRQQG*SPDTGL
Trigger: CAGCCCGGTGTCCGGGGACAAACCCTGCTGCCGGCT...CAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAGGGCTGAACTCGCAGTaGGCCATAGGGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESGLNSQ*AIGLQA
Trigger: CGCCTGGAGCCCTATGGCCAACTGCGAGTTCAGCCC...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCGACGCCAAGACAGAGTaGGGCTCTCCTAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSDAKTE*GSPREP
Trigger: CGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGTC...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS TCA 90 bp CACCATGTGATCTCTGTAAATGCCAGCTCCCCTTCCCCTTCTCCATaGGTGGAAACAGCCTCAGGCCTTCACCCGAAGTGGATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: HHVISVNASSPSPSP*VETASGLHPKWMLV
Trigger: TACCAGCATCCACTTCGGGTGAAGGCCTGAGGCTGTTTCCACTCATGGAGAAGGGGAAGGGGAGCTGGCATTTACAGAGATCACATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS-3UTR CAA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGCTGTGGGAAACTGGATaGTCAAGCAGGGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGLWETG*SSRGGR
Trigger: TCTTCCTCCCCTGCTTGACAATCCAGTTTCCCACAG...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTGTGGGGCAAAGATACCCACGTaGGAACTACAGGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VKNPWTDHGGYSYKGSCGAKIPT*ELQGER
Trigger: CCTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGC...CCCACAGGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGTCGATGCTGTCCCCCTaGTATCACAGTGTGCAGACA +
Preference number: 5 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKSMLSP*YHSVQT
Trigger: TGTCTGCACACTGTGATACAAGGGGGACAGCATCGA...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp CTTATAATCGATTCCAGCTCTTTTATGGTGGGATCCTGGCATAAGTCTCTGGAAGTCTCGGGAAAGCGCTaGGTGGTGCCCGGACCGCTC +
Preference number: 5 (lower is better)
Translates to: LIIDSSSFMVGSWHKSLEVSGKR*VVPGPL
Trigger: GAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGAC...TTCCAGAGACTTATGCCAGGATCCCACCATAAAAGAGCTGGAATCGATTATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAACTTCCGTCTCTGGCATaGACCTTATTGTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKLPSLA*TLLWRT
Trigger: GGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAG...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GGGCTAGTGAAGAATCCCTGGACTGACCATGGTGGCTACAGCTACAAAGGCTCCTCAAGGGGTATCCTGTaGAGCAAGGACTCGATGAGT +
Preference number: 5 (lower is better)
Translates to: GLVKNPWTDHGGYSYKGSSRGIL*SKDSMS
Trigger: ACTCATCGAGTCCTTGCTCAACAGGATACCCCTTGA...GGAGCCTTTGTAGCTGTAGCCACCATGGTCAGTCCAGGGATTCTTCACTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp AGTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAATCATTCCCACAGCCTTaGGGTAAGCATGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: SPSGQRWQRYPRWNYRGKSFPQP*GKHDGG
Trigger: CCCACCATCATGCTTACCCAAAGGCTGTGGGAATGA...TTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS TCA 90 bp AGTTCCCAGGACAGCTGGTCATTACAAACAGCCTGGCACCTCCCCTaGCCTCTCCTTGCTTTCCTCCCTCACCATGTGATCTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: SSQDSWSLQTAWHLP*PLLAFLPHHVISVN
Trigger: ATTTACAGAGATCACATGGTGAGGGAGGAAAGCAAGGAGAGGTCAGGGGAGGTGCCAGGCTGTTTGTAATGACCAGCTGTCCTGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS-3UTR CAA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAACTGAAACAGGGTTGTaGCTGCAGTCCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPTETGL*LQSFLQ
Trigger: CTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGT...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS TCA 90 bp AGCGTGTCCTCCAGGGTGAACATGTCCCGCTGGACCTGTGTGAACTaGTGGGCCAGATCTTTTATTCTGCTCCAAAGAAGAATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SVSSRVNMSRWTCVN*WARSFILLQRRILL
Trigger: CAACAAGATTCTTCTTTGGAGCAGAATAAAAGATCTGGCCCATCAGTTCACACAGGTCCAGCGGGACATGTTCACCCTGGAGGACACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226279.8
ENST00000510674.1
ENST00000511430.1
CDS TCA 90 bp GAGGTGTTGAGTCTTTCTGGGCAGGATAAGGCTACATCTGAAAAATaGTGGCAAAGCCAGTGCCTGAGATGGAAGAGTCCAGTCCATGGC +
Preference number: 5 (lower is better)
Translates to: EVLSLSGQDKATSEK*WQSQCLRWKSPVHG
Trigger: GCCATGGACTGGACTCTTCCATCTCAGGCACTGGCTTTGCCATCATTTTTCAGATGTAGCCTTATCCTGCCCAGAAAGACTCAACACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS-3UTR CAA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCAATAGTTCAAAGCCTGTaGTGCTTTGTGTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESIVQSL*CFVWVS
Trigger: GCTCACCCACACAAAGCACAACAGGCTTTGAACTAT...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAATAGTTTCCACCGCCTaGCGCTACTTGCATTCTGAT +
Preference number: 5 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPIVSTA*RYLHSD
Trigger: ATCAGAATGCAAGTAGCGCAAGGCGGTGGAAACTAT...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGGAAATAAATGCACCCTaGAAAGCATCCCATACACTT +
Preference number: 5 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKEINAP*KASHTL
Trigger: AAGTGTATGGGATGCTTTCAAGGGTGCATTTATTTC...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp TCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTGTTACTGCGGGATCCATaGAGCATCACATGGACCACA +
Preference number: 5 (lower is better)
Translates to: SANLRETVFQNTETGLLLLLRDP*SITWTT
Trigger: TGTGGTCCATGTGATGCTCAATGGATCCCGCAGTAA...CAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS TCA 90 bp GGCAGGATAAGGCTACATCTGAAAAATGATGGCAAAGCCAGTGCCTaGGATGGAAGAGTCCAGTCCATGGCTACTGTGATGATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GRIRLHLKNDGKASA*DGRVQSMATVMILK
Trigger: CTTCAGAATCATCACAGTAGCCATGGACTGGACTCTTCCATCTCAGGCACTGGCTTTGCCATCATTTTTCAGATGTAGCCTTATCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS-3UTR CAA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAGGGCTGAACTCGCAGTaGGCCATAGGGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVGLNSQ*AIGLQA
Trigger: CGCCTGGAGCCCTATGGCCAACTGCGAGTTCAGCCC...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp GGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCTCAGATGTGCAAAGCATCCCATACACTTaGGCAGTCTACATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GVKELKQPQRLAQISDVQSIPYT*AVYMSH
Trigger: ATGAGACATGTAGACTGCCAAAGTGTATGGGATGCT...TTGCACATCTGAGATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp GTCCTTCGGGCCAGAGATGGCAAAGATACCCACGTTGGAACTACAGGGGGAAAGTTTATTTTGGAAGTGTaGAATTCACCACACCATGTG +
Preference number: 5 (lower is better)
Translates to: VLRARDGKDTHVGTTGGKFILEV*NSPHHV
Trigger: CACATGGTGTGGTGAATTCAACACTTCCAAAATAAA...CTTTCCCCCTGTAGTTCCAACGTGGGTATCTTTGCCATCTCTGGCCCGAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp CATAAACCACAAGGAGTCAAGGAGCTAAAACAACCACAGCGACTGGCTCAGATCAATACTGAAACAGGGTaGTTGCTGCAGTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HKPQGVKELKQPQRLAQINTETG*LLQSFL
Trigger: GAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATT...GATCTGAGCCAGTCGCTGTGGTTGTTTTAGCTCCTTGACTCCTTGTGGTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp TTGGGGAAAAAGGCTTCCGTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCACATGAAGTTTATGGTTaGACTATCTGTAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: LGKKASVSGIDLIVEDPPHEVYG*TICRKG
Trigger: ACCCTTCCTACAGATAGTCAAACCATAAACTTCATG...TGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAGCCTTTTTCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCATGCAATTACTGTGGATaGAGAGACACTGTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESCNYCG*RDTVVV
Trigger: TACAACAACAGTGTCTCTCAATCCACAGTAATTGCA...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp CCTTGTGACCACCCTCCCCTAAGGTCTCCACTGGCTCTGAACTTGAACACTCAAGTTTTGCCAAAATATTaGATAGCTCTGCCAGTTACA +
Preference number: 5 (lower is better)
Translates to: PCDHPPLRSPLALNLNTQVLPKY*IALPVT
Trigger: TGTAACTGGCAGAGCTATCAAATATTTTGGCAAAAC...TTGAGTGTTCAAGTTCAGAGCCAGTGGAGACCTTAGGGGAGGGTGGTCACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS TCA 90 bp CTAGGTCCCACTGAGACCTCATCCTGTTCTAGACTTCTTTGGACCTaGATGATGACCTTACAGAGAGCAAAATACCAAGAATTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: LGPTETSSCSRLLWT*MMTLQRAKYQEFGS
Trigger: GCTTCCGAATTCTTGGTATTTTGCTCTCTGTAAGGTCATCATTCAGGTCCAAAGAAGTCTAGAACAGGATGAGGTCTCAGTGGGACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS GCA 90 bp ACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTGGGCAAGATTGATAGTTTATTTTGG +
Preference number: 5 (lower is better)
Translates to: TCGKPFSRILKQGCC*SPFSSLGKIDSLFW
Trigger: CCAAAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS GCA 90 bp ACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTGGGCAAGATTGATAGTTTATTTCAC +
Preference number: 5 (lower is better)
Translates to: TCGKPFSRILKQGCC*SPFSSLGKIDSLFH
Trigger: GTGAAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510674.1
CDS CCA 90 bp GGACTAGTAGGAGGTGTTTGGGTCATAGGGATGATCCTGCACGAATaGCATGGTGCTGTCCTTATAGTAATGAGTTCTTACTCTACTAGT +
Preference number: 5 (lower is better)
Translates to: GLVGGVWVIGMILHE*HGAVLIVMSSYSTS
Trigger: ACTAGTAGAGTAAGAACTCATTACTATAAGGACAGCACCATGCCATTCGTGCAGGATCATCCCTATGACCCAAACACCTCCTACTAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS-3UTR CAA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACGAAATAAATGCACCCTaGAAAGCATCCCATACACTT +
Preference number: 5 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHEINAP*KASHTL
Trigger: AAGTGTATGGGATGCTTTCAAGGGTGCATTTATTTC...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp TTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACCAGCAGGTATGCTGAGTCATTCACTTTTCTTCACTaGCCTGTTCTAATAAGAGAG +
Preference number: 5 (lower is better)
Translates to: LWRTLQNLQLCTSRYAESFTFLH*PVLIRE
Trigger: CTCTCTTATTAGAACAGGCAAGTGAAGAAAAGTGAA...TGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp GTCTCTGGCATTGACCTTATTGTGGAGGACCCTCCAAAATCTTCAGCTCTGCACAGAAAAACATGTGTTTaGGAGCCATCCAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: VSGIDLIVEDPPKSSALHRKTCV*EPSRRT
Trigger: AGTTCTTCTGGATGGCTCCAAAACACATGTTTTTCT...GTGCAGAGCTGAAGATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp CAGTTACATGAGAGACGTGGACATGGCACTAAACACGTTGACACAAATGGTGACATGGCACTAAACACGTaGACACAAATGGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: QLHERRGHGTKHVDTNGDMALNT*TQMVTQ
Trigger: CTGAGTCACCATTTGTGTCAACGTGTTTAGTGCCAT...GTCACCATTTGTGTCAACGTGTTTAGTGCCATGTCCACGTCTCTCATGTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS GCA 90 bp CAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTaGTGCAGTCCTTTCTCCAGTCTGGGCAAGATTGATAGTTTATTT +
Preference number: 5 (lower is better)
Translates to: QTCGKPFSRILKQGC*CSPFSSLGKIDSLF
Trigger: AAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000510674.1
CDS GCA 90 bp ACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTGCTaGAGTCCTTTCTCCAGTCTGGGCAAGATTGATAGTTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: TCGKPFSRILKQGCC*SPFSSLGKIDSLFL
Trigger: AAGAAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGAGCATCCCATACACTTaGGCAGTCTACATGTCTCAT +
Preference number: 5 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKSIPYT*AVYMSH
Trigger: ATGAGACATGTAGACTGCCAAAGTGTATGGGATGCT...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GGTTTGACTATCTGTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCCTTCCGTCTCTGGCATaGACCTTATTGTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: GLTICRKGTKIHHATRSFLPSLA*TLLWRT
Trigger: GGTCCTCCACAATAAGGTCAATGCCAGAGACGGAAG...GAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTACAGATAGTCAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp GCAGCTTCTGCAAACCTGCGGGAAACCGTTTTCCAGAATACTGAAACAGGGTTGTTCACTTTTCTTCACTaGCCTGTTCTAATAAGAGAG +
Preference number: 5 (lower is better)
Translates to: AASANLRETVFQNTETGLFTFLH*PVLIRE
Trigger: CTCTCTTATTAGAACAGGCAAGTGAAGAAAAGTGAA...CAACCCTGTTTCAGTATTCTGGAAAACGGTTTCCCGCAGGTTTGCAGAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502843.5
CDS-3UTR CAA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGACTGAAACAGGGTTGTaGCTGCAGTCCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRTETGL*LQSFLQ
Trigger: CTGGAGAAAGGACTGCAGCAACAACCCTGTTTCAGT...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACAAATACTGAAACAGGGTaGTTGCTGCAGTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTNTETG*LLQSFL
Trigger: GAGAAAGGACTGCAGCAACAACCCTGTTTCAGTATT...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp ATTTTCACCAACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGCTGGCATTGACCTTATaGTGGAGGACCCTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: IFTNMTHDHEVYGLTICRLALTL*WRTLQN
Trigger: ATTTTGGAGGGTCCTCCACAATAAGGTCAATGCCAG...CCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTTGGTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226279.8
ENST00000502843.5
CDS-3UTR CAA 90 bp TGTGGGTGTATGCAGTCATATGCACTTACGTATGTGTGTGTGTGTCCTTTCAAGCATGAAGTTTATGGTTaGACTATCTGTAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: CGCMQSYALTYVCVCPFKHEVYG*TICRKG
Trigger: ACCCTTCCTACAGATAGTCAAACCATAAACTTCATG...CTTGAAAGGACACACACACACATACGTAAGTGCATATGACTGCATACACCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp AAACATGTGTTTTGGAGCCATCCAGAAGAACTATATTCCAGATTCCATTCTAGTGTGTGCAGACATGGGTaGAGCTTCTTCCAAACAAGA +
Preference number: 5 (lower is better)
Translates to: KHVFWSHPEELYSRFHSSVCRHG*SFFQTR
Trigger: TCTTGTTTGGAAGAAGCTCAACCCATGTCTGCACAC...ACTAGAATGGAATCTGGAATATAGTTCTTCTGGATGGCTCCAAAACACATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp AACATGACCCATGACCATGAAGTTTATGGTTTGACTATCTGTAGGAAGGGTACACTGCCTACTGAGTTCTaGGTGGATTGCTTAAAATAC +
Preference number: 5 (lower is better)
Translates to: NMTHDHEVYGLTICRKGTLPTEF*VDCLKY
Trigger: GTATTTTAAGCAATCCACCAAGAACTCAGTAGGCAG...TGTACCCTTCCTACAGATAGTCAAACCATAAACTTCATGGTCATGGGTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAATTTTGATTTCTTGTTaGGAAGGGGATGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVILISC*EGDVAQ
Trigger: CTGGGCCACATCCCCTTCCAAACAAGAAATCAAAAT...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTACCAGTCTGGGCAAGATaGATAGTTTATTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVPVWAR*IVYFGS
Trigger: ACTTCCAAAATAAACTATCAATCTTGCCCAGACTGG...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS-3UTR CAA 90 bp GTAGGAAGGGTACAAAAATACATCATGCAACAAGGTCATTCATTTGGAAATGTAAAAATAATTGTGGTTTaGCCATTCCTTTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VGRVQKYIMQQGHSFGNVKIIVV*PFLSVA
Trigger: TGCCACCGAAAGGAATGGCAAAACCACAATTATTTT...TACATTTCCAAATGAATGACCTTGTTGCATGATGTATTTTTGTACCCTTCCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS GCA 72 bp TCGGGAAAGCGCTTGGTGGTGCCCGGACCGCTCCACTaGTGGCGCCACCTCGGGACGACCACCGCGAGCACC +
Preference number: 6 (lower is better)
Translates to: SGKRLVVPGPLH*WRHLGTTTAST
Trigger: GGTGCTCGCGGTGGTCGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CCA 72 bp CGCATCGCGCCAGGACGGTCTCGGGAAAGCGCTTGGTaGTGCCCGGACCGCTCCACTGCTGGCGCCACCTCG +
Preference number: 6 (lower is better)
Translates to: RIAPGRSRESAW*CPDRSTAGATS
Trigger: CGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGTCCTGGCGCGATGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS GCA 72 bp ATCGCGCCAGGACGGTCTCGGGAAAGCGCTTGGTGGTaGCCGGACCGCTCCACTGCTGGCGCCACCTCGGGA +
Preference number: 6 (lower is better)
Translates to: IAPGRSRESAWW*PDRSTAGATSG
Trigger: TCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGTCCTGGCGCGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 72 bp TTGACGCATCGCGCCAGGACGGTCTCGGGAAAGCGCTaGGTGGTGCCCGGACCGCTCCACTGCTGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: LTHRARTVSGKR*VVPGPLHCWRH
Trigger: GTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGTCCTGGCGCGATGCGTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 90 bp TCAGTGTACTTGACGCATCGCGCCAGGACGGTCTCGGGAAAGCGCTaGGTGGTGCCCGGACCGCTCCACTGCTGGCGCCACCTCGGGACG +
Preference number: 6 (lower is better)
Translates to: SVYLTHRARTVSGKR*VVPGPLHCWRHLGT
Trigger: CGTCCCGAGGTGGCGCCAGCAGTGGAGCGGTCCGGGCACCACCAAGCGCTTTCCCGAGACCGTCCTGGCGCGATGCGTCAAGTACACTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 72 bp CAGGGTTTGTCCCCGGACACCGGGCTGAACTCGCAGTaGGCCATAGGGCTCCAGGCGGGGTTGGCTGGGCGA +
Preference number: 6 (lower is better)
Translates to: QGLSPDTGLNSQ*AIGLQAGLAGR
Trigger: TCGCCCAGCCAACCCCGCCTGGAGCCCTATGGCCAACTGCGAGTTCAGCCCGGTGTCCGGGGACAAACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 72 bp CAGAGTTGGGCTCTCCTAGAGAGCCGGCAGCAGGGTTaGTCCCCGGACACCGGGCTGAACTCGCAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: QSWALLESRQQG*SPDTGLNSQLA
Trigger: GGCCAACTGCGAGTTCAGCCCGGTGTCCGGGGACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 90 bp ACGCCAAGACAGAGTTGGGCTCTCCTAGAGAGCCGGCAGCAGGGTTaGTCCCCGGACACCGGGCTGAACTCGCAGTTGGCCATAGGGCTC +
Preference number: 6 (lower is better)
Translates to: TPRQSWALLESRQQG*SPDTGLNSQLAIGL
Trigger: GAGCCCTATGGCCAACTGCGAGTTCAGCCCGGTGTCCGGGGACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 90 bp CACCACGACGAGGATCAGGACCAGGATACTGACGCCAAGACAGAGTaGGGCTCTCCTAGAGAGCCGGCAGCAGGGTTTGTCCCCGGACAC +
Preference number: 6 (lower is better)
Translates to: HHDEDQDQDTDAKTE*GSPREPAAGFVPGH
Trigger: GTGTCCGGGGACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGTCAGTATCCTGGTCCTGATCCTCGTCGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CCA 72 bp AGGATCAGGACCAGGATACTGACGCCAAGACAGAGTTaGGCTCTCCTAGAGAGCCGGCAGCAGGGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: RIRTRILTPRQS*ALLESRQQGLS
Trigger: GGACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGTCAGTATCCTGGTCCTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 72 bp GAGGATCAGGACCAGGATACTGACGCCAAGACAGAGTaGGGCTCTCCTAGAGAGCCGGCAGCAGGGTTTGTC +
Preference number: 6 (lower is better)
Translates to: EDQDQDTDAKTE*GSPREPAAGFV
Trigger: GACAAACCCTGCTGCCGGCTCTCTAGGAGAGCCCAACTCTGTCTTGGCGTCAGTATCCTGGTCCTGATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226279.8
ENST00000502843.5
ENST00000506191.1
ENST00000511430.1
CDS CAA 72 bp CCCCCAGTGTTGGAGCTCGGGACTAGTAGGAGGTGTTaGGGTCATAGGGATGATCCTGCACGAATGGCATGG +
Preference number: 6 (lower is better)
Translates to: PPVLELGTSRRC*GHRDDPARMAW
Trigger: CCATGCCATTCGTGCAGGATCATCCCTATGACCCAAACACCTCCTACTAGTCCCGAGCTCCAACACTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS CAA 72 bp GGCAATCCCACAGGGCCCAGAGCCTCACTGGAAGTGTaGAATTCACCACACCATGTGAGGTCATCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: GNPTGPRASLEV*NSPHHVRSSAR
Trigger: CCTTGCTGATGACCTCACATGGTGTGGTGAATTCAACACTTCCAGTGAGGCTCTGGGCCCTGTGGGATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS GCA 72 bp GAGTGGAAACAGCCTCAGGCCTTCACCCGAAGTGGATaGTGGTACCCTACTTCTTGTACAGCCTGCGTAACT +
Preference number: 6 (lower is better)
Translates to: EWKQPQAFTRSG*WYPTSCTACVT
Trigger: AGTTACGCAGGCTGTACAAGAAGTAGGGTACCAGCATCCACTTCGGGTGAAGGCCTGAGGCTGTTTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS GCA 72 bp ATTACAAACAGCCTGGCACCTCCCCTGACCTCTCCTTaGTTTCCTCCCTCACCATGTGATCTCTGTAAATGC +
Preference number: 6 (lower is better)
Translates to: ITNSLAPPLTSP*FPPSPCDLCKC
Trigger: GCATTTACAGAGATCACATGGTGAGGGAGGAAAGCAAGGAGAGGTCAGGGGAGGTGCCAGGCTGTTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS TCA 72 bp AGGCTACATCTGAAAAATGATGGCAAAGCCAGTGCCTaGGATGGAAGAGTCCAGTCCATGGCTACTGTGATG +
Preference number: 6 (lower is better)
Translates to: RLHLKNDGKASA*DGRVQSMATVM
Trigger: CATCACAGTAGCCATGGACTGGACTCTTCCATCTCAGGCACTGGCTTTGCCATCATTTTTCAGATGTAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS TCA 72 bp GAGAGCAAAATACCAAGAATTCGGAAGCAGGCTATGTaGGCACTCAAAAGAAGGGAATTAGGGAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: ESKIPRIRKQAM*ALKRRELGSMG
Trigger: GCCCATGCTCCCTAATTCCCTTCTTTTGAGTGCTCACATAGCCTGCTTCCGAATTCTTGGTATTTTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS TCA 72 bp AGTCTTTCTGGGCAGGATAAGGCTACATCTGAAAAATaGTGGCAAAGCCAGTGCCTGAGATGGAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: SLSGQDKATSEK*WQSQCLRWKSP
Trigger: TGGACTCTTCCATCTCAGGCACTGGCTTTGCCATCATTTTTCAGATGTAGCCTTATCCTGCCCAGAAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS TCA 72 bp TTTGGTTGTAGGAAATCCCTTCCCCTGGTGAGGTGTTaGGTCTTTCTGGGCAGGATAAGGCTACATCTGAAA +
Preference number: 6 (lower is better)
Translates to: FGCRKSLPLVRC*VFLGRIRLHLK
Trigger: TTTCAGATGTAGCCTTATCCTGCCCAGAAAGACTCAACACCTCACCAGGGGAAGGGATTTCCTACAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS CAA 72 bp GTTGTTGCTGCAGTCCTTTCTCCAGTCTGGGCAAGATaGATAGTTTATTTCACACCATGTGAGGTCATCAGC +
Preference number: 6 (lower is better)
Translates to: VVAAVLSPVWAR*IVYFTPCEVIS
Trigger: GCTGATGACCTCACATGGTGTGAAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510674.1
CDS CCA 72 bp TGTTTGGGTCATAGGGATGATCCTGCACGAATGGCATaGTGCTGTCCTTATAGTAATGAGTTCTTACTCTAC +
Preference number: 6 (lower is better)
Translates to: CLGHRDDPARMA*CCPYSNEFLLY
Trigger: GTAGAGTAAGAACTCATTACTATAAGGACAGCACCATGCCATTCGTGCAGGATCATCCCTATGACCCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS GCA 72 bp CGAAGTGGATGCTGGTACCCTACTTCTTGTACAGCCTaGGTAACTGTGAGTCAAATAAACCTCTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: RSGCWYPTSCTA*VTVSQINLFSL
Trigger: TAAAGAAAAGAGGTTTATTTGACTCACAGTTACGCAGGCTGTACAAGAAGTAGGGTACCAGCATCCACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS TCA 72 bp ACTGAGACCTCATCCTGTTCTAGACTTCTTTGGACCTaGATGATGACCTTACAGAGAGCAAAATACCAAGAA +
Preference number: 6 (lower is better)
Translates to: TETSSCSRLLWT*MMTLQRAKYQE
Trigger: TTCTTGGTATTTTGCTCTCTGTAAGGTCATCATTCAGGTCCAAAGAAGTCTAGAACAGGATGAGGTCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1
CDS CAA 72 bp GTTGTTGCTGCAGTCCTTTCTCCAGTCTGGGCAAGATaGATAGTTTATTTTGGAAGTGTTGAATTCACCACA +
Preference number: 6 (lower is better)
Translates to: VVAAVLSPVWAR*IVYFGSVEFTT
Trigger: TGTGGTGAATTCAACACTTCCAAAATAAACTATCAATCTTGCCCAGACTGGAGAAAGGACTGCAGCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226279.8
CDS TCA 72 bp TTTCAAGAAAACAGGGAATGCTACTTTATATCAGCCTaGGTTGCCATTAAGGGTAGTGCTATAGTTTGGATA +
Preference number: 6 (lower is better)
Translates to: FQENRECYFISA*VAIKGSAIVWI
Trigger: TATCCAAACTATAGCACTACCCTTAATGGCAACTCAGGCTGATATAAAGTAGCATTCCCTGTTTTCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511430.1