RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD37 (Homo sapiens)

Ensembl gene IDs: ENSG00000104894

Ensembl transcript IDs: ENST00000323906.9, ENST00000391859.6, ENST00000426897.6, ENST00000535669.6, ENST00000593512.5, ENST00000595660.1, ENST00000595725.5, ENST00000596426.5, ENST00000597033.5, ENST00000597602.1, ENST00000597852.5, ENST00000598095.5, ENST00000598134.1, ENST00000600121.1

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCCCCACCCTCCGGTGCTGGGTGGAGCGGCGGGAGGGCCGGGGTaGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAG +
Preference number: 1 (lower is better)
Translates to: RPHPPVLGGAAGGPG*AALRPELVLPRQPK
Trigger: CTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCGGCCCTCCCGCCGCTCCACCCAGCACCGGAGGGTGGGGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR GCA 90 bp GCGATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTaGGGCTCGCATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACG +
Preference number: 1 (lower is better)
Translates to: AIRLGPGLESPAPGT*GSHFRRSALRCSCT
Trigger: CGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGATCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR TCA 90 bp AGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: RSRARGAPPTRYLSG*GLGTSPAGSASRSS
Trigger: GCTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR GCA 90 bp GCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: ALAVDVALCRDSADV*TVSGPRQVSKPAEL
Trigger: CAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR CCA 90 bp CGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAACTaGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCG +
Preference number: 1 (lower is better)
Translates to: RGSPGECEGGGLQAN*GLNKYLQAAGKCPA
Trigger: CGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
3UTR CCA 90 bp TCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCTAGGATTGTGGAGTCGTTGGTCGCC +
Preference number: 1 (lower is better)
Translates to: SALCLDRARCPSLLS*GKITLSRIVESLVA
Trigger: GGCGACCAACGACTCCACAATCCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR GCA 90 bp AGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCATCTaGGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTT +
Preference number: 1 (lower is better)
Translates to: SALRCSCTLSTMTVI*GERGGRSQPIAGGF
Trigger: AAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR TCA 90 bp CTGGCTGATGAGGCGGGAATAGCTGCTACAAGTGGGGGTAGAGGCTaGGAAGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTG +
Preference number: 1 (lower is better)
Translates to: LADEAGIAATSGGRG*EGVRSEASPGSFIL
Trigger: CAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCTTCTCAGCCTCTACCCCCACTTGTAGCAGCTATTCCCGCCTCATCAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGCCAGCGCCCGGCACGTaGGGCTCGCATTTCCGGCGG +
Preference number: 2 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQPAPGT*GSHFRR
Trigger: CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGG...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp CCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCCCCCTCTCAGGCTGTaGCAGCCTCAGGCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PARSPRGRCGSLQGQRRCPPLRL*QPQAGP
Trigger: AGGGCCCGCCTGAGGCTGGCACAGCCTGAGAGGGGG...ACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR GCA 90 bp CGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGCCAGAGCCCAGCCACCCCACAGACTaGCGCTGTGCCCGCCGCCGC +
Preference number: 2 (lower is better)
Translates to: RTSSVRLVLVLNPQRPEPSHPTD*RCARRR
Trigger: GCGGCGGCGGGCACAGCGGCAGTCTGTGGGGTGGCT...GGGCTCTGGCCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR CAA 90 bp GGGCACGCGGTGCGCCTCCGACCCGTTACCTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCAGCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: GHAVRLRPVTSQDED*EPVLRVVPAAAAQL
Trigger: CAGCTGCGCTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCACCGCGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR GCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTGCAGGAGGCTTTCCCTaGGTACACCCAATCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SGWARGSNPQRPARAARIAGGFP*VHPIRA
Trigger: AGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGC...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGTCCGGCGGAGTGCCCTaGGCTGTAGCTGTACGCTCA +
Preference number: 2 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQSGGVP*AVAVRS
Trigger: TGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGA...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTTCCGGCGGAGTGCCCTaGGCTGTAGCTGTACGCTCA +
Preference number: 2 (lower is better)
Translates to: GRGSTGTAAGLADEAGIASGGVP*AVAVRS
Trigger: TGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGA...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp TTCTGCGCCCGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGAGCCACCCCACAGACTaGCGCTGTGCCCGCCGCCGC +
Preference number: 2 (lower is better)
Translates to: FCARTSSVRLVLVLNPQRSHPTD*RCARRR
Trigger: GCGGCGGCGGGCACAGCGGCAGTCTGTGGGGTGGCT...CCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCGGGCGCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR TCA 90 bp TCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAGTCCCGTGGGAGAGGTaGCAGCAGCAGGGGCACGCA +
Preference number: 2 (lower is better)
Translates to: SAGTAQMSALCLDRARCPVPWER*QQQGHA
Trigger: TGCGTGCCCCTGCTGCTGTCACCTCTCCCACGGGAC...TGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR TCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTGTACGCTCAGCACCATaGCAGTCATCTGCGGAGAAA +
Preference number: 2 (lower is better)
Translates to: SGWARGSNPQRPARAARIVRSAP*QSSAEK
Trigger: TTTCTCCGCAGATGACTGTCATGGTGCTGAGCGTAC...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp TCTCAGGATGAGGACTTGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCAGCGCAGGCAGCAGGGAAGTaGCCAGCGCACGTGACGGGG +
Preference number: 2 (lower is better)
Translates to: SQDEDLEPVLRVVPAAAAQAAGK*PAHVTG
Trigger: CCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTG...CGCTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CCA 90 bp CGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCGGGGACAGGAAGCTGTaGACGAAAGCCCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: RAALAVDVALCRDSADVCGDRKL*TKAPGP
Trigger: GGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCC...GCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR GCA 90 bp GACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCTTATCTAGGCAGGCAGCAGGGAAGTaGCCAGCGCACGTGACGGGG +
Preference number: 2 (lower is better)
Translates to: DRARCPSLLSWGKITLSRQAAGK*PAHVTG
Trigger: CCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTG...CCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR CAA 90 bp CCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGACGTCCCGCAAGCTTCGCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PALLGRGLLGVGAVL*DGFLYDVPQASLQL
Trigger: CAGCTGGAGCGAAGCTTGCGGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR CAA 90 bp TCGAGTAGGCCGACGCCCAGGCAAATGCCCACTATGGAAATAAGGTaGTTGTGCAGCCACTTCTGGAGGCCCTGCGCGCAGCCCTCGCGG +
Preference number: 2 (lower is better)
Translates to: SSRPTPRQMPTMEIR*LCSHFWRPCAQPSR
Trigger: CCGCGAGGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGGCGTCGGCCTACTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR TCA 90 bp AGGCCGACGCCCAGGCAAATGCCCACTATGGAAATAAGGTTGTTGTGCAGCCACGTCCCCAGGGGAATGTaGAGGCGGAGGGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: RPTPRQMPTMEIRLLCSHVPRGM*RRRAPG
Trigger: GCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGAC...GTGGCTGCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGGCGTCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR GCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 2 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAEQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR GCA 90 bp CATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCGCAGGAGGCTTTCCCTaGGTACACCCAATCAGGGCT +
Preference number: 2 (lower is better)
Translates to: HFRRSALRCSCTLSTMTVAGGFP*VHPIRA
Trigger: AGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGC...GACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp GGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCATGGGCAGCTTGCCCTaGGGTGCCTTGTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GSKPRVLYFGGSSVFPLCMGSLP*GALSPQ
Trigger: CTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCAT...GCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR GCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCGGGCCATGGGCAGCTTaGCCTGCGGTGCCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVGPWAA*PAVPCL
Trigger: GAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCC...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR TCA 90 bp TGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTGTCTCAAATCCTTACTaGATGGCTAGCTCTGTGTAC +
Preference number: 2 (lower is better)
Translates to: WSRWSPTSCSRSRARGAPVSNPY*MASSVY
Trigger: GTACACAGAGCTAGCCATTCAGTAAGGATTTGAGAC...AGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR GCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCATGGGCAGCTTGCCCTaGGGTGCCTTGTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVMGSLP*GALSPQ
Trigger: CTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCAT...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR-3UTR CCA 90 bp CTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 2 (lower is better)
Translates to: LAVDVALCRDSADVCTVSGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...AGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGTGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGACLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR GCA 90 bp CTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 2 (lower is better)
Translates to: LAVDVALCRDSADVCTVSSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...AGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR TCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCACTGAGAGGCCACCAGTaGGGCTGGGCCTTATCTTCC +
Preference number: 2 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPLRGHQ*GWALSS
Trigger: GGAAGATAAGGCCCAGCCTCACTGGTGGCCTCTCAG...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR CCA 90 bp CAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCCAAATCCTTACTGAATaGCTAGCTCTGTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: QGQRRCLHCVWTAPGVQAQILTE*LALCTS
Trigger: TGAAGTACACAGAGCTAGCCATTCAGTAAGGATTTG...GGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR-3UTR GCA 90 bp GTATCGAGCGAGCCGGTTGTAGACGTGGTCCAGGTTTCTGCACAGGAATATCGATCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 2 (lower is better)
Translates to: VSSEPVVDVVQVSAQEYRSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...TCGATATTCCTGTGCAGAAACCTGGACCACGTCTACAACCGGCTCGCTCGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CCA 90 bp AGGCCGACGCCCAGGCAAATGCCCACTATGGAAATAAGGTTGTTGTGCAGCCACTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 2 (lower is better)
Translates to: RPTPRQMPTMEIRLLCSHLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...GTGGCTGCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGGCGTCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR GCA 72 bp CTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTaGGGCTCGCATTTCCGGCGGAGTGCCCTGCGCTGT +
Preference number: 3 (lower is better)
Translates to: LGPGLESPAPGT*GSHFRRSALRC
Trigger: ACAGCGCAGGGCACTCCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR TCA 72 bp GCACGCGGTGCGCCTCCGACCCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCTGCGGGTAGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: ARGAPPTRYLSG*GLGTSPAGSAS
Trigger: GCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCACCGCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR GCA 72 bp GCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTCTGCACTGTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: ALRAALAVDVAL*RDSADVCTVSG
Trigger: TCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CAA 90 bp CGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 3 (lower is better)
Translates to: RAALAVDVALCRDSADVCAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...GCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR CCA 72 bp GGTGGTGGTAGGCCGACAGATGGGGACAGGAAGCTGTaGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACA +
Preference number: 3 (lower is better)
Translates to: GGGRPTDGDRKL*TKAPGPVGEVT
Trigger: TGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCCATCTGTCGGCCTACCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
3UTR GCA 72 bp GTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: VDVALCRDSADV*TVSGPRQVSKP
Trigger: AGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CAA 90 bp GGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCTTGCCCTGCGGTGCCTaGTCTCCCCAGTTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: GSKPRVLYFGGSSVFPLCLPCGA*SPQLGQ
Trigger: CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAA...GCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR TCA 72 bp GAGGCGGGAATAGCTGCTACAAGTGGGGGTAGAGGCTaGGAAGGAGTAAGGTCGGAAGCAAGCCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: EAGIAATSGGRG*EGVRSEASPGS
Trigger: GGACCCTGGGCTTGCTTCCGACCTTACTCCTTCTCAGCCTCTACCCCCACTTGTAGCAGCTATTCCCGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
3UTR GCA 72 bp CCCAGGCAAATGCCCACTATGGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCCTGCGCGCAGCCCTCG +
Preference number: 3 (lower is better)
Translates to: PRQMPTMEIRLL*SHFWRPCAQPS
Trigger: CGAGGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR CCA 72 bp TGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCTAGGATTGTGGAGTCG +
Preference number: 3 (lower is better)
Translates to: CLDRARCPSLLS*GKITLSRIVES
Trigger: CGACTCCACAATCCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR CCA 72 bp GGGGCAAGATCACCTTATCTAGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGC +
Preference number: 3 (lower is better)
Translates to: GARSPYLGLWSR*SPTSCSRSRAR
Trigger: GCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCACAATCCTAGATAAGGTGATCTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CAA 90 bp GTATCGAGCGAGCCGGTTGTAGACGTGGTCCAGGTTTCTGCACAGGAATATCGATCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 3 (lower is better)
Translates to: VSSEPVVDVVQVSAQEYRSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...TCGATATTCCTGTGCAGAAACCTGGACCACGTCTACAACCGGCTCGCTCGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
3UTR-3UTR CAA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 3 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR TCA 72 bp GCCCTGTGCATCTCTGGGCCAGTCTCAAATCCTTACTaGATGGCTAGCTCTGTGTACTTCAGGTCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: ALCISGPVSNPY*MASSVYFRSVF
Trigger: AAAGACAGACCTGAAGTACACAGAGCTAGCCATTCAGTAAGGATTTGAGACTGGCCCAGAGATGCACAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR CCA 72 bp TGTGCATCTCTGGGCCAGTCTCAAATCCTTACTGAATaGCTAGCTCTGTGTACTTCAGGTCTGTCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: CASLGQSQILTE*LALCTSGLSFC
Trigger: ACAGAAAGACAGACCTGAAGTACACAGAGCTAGCCATTCAGTAAGGATTTGAGACTGGCCCAGAGATGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp CGCCGCCGCCGTCAGCGATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: RRRRQRSGWARGSNPQRPEQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...CGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACGGCGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTAGCCACCCCACAGACTaGCGCTGTGCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGWARGSNPQRPARAARISHPTD*RCARRR
Trigger: GCGGCGGCGGGCACAGCGGCAGTCTGTGGGGTGGCT...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CGCCGCCGCCGTCAGCGATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGTTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRRRQRSGWARGSNPQRPLCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...CGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACGGCGGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp CCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGAGGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: PGARIPSARHVRLAFPAEGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...CTCCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGTTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRLCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGGTCCCCAGGGGAATGTaGAGGCGGAGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQAVPRGM*RRRAPG
Trigger: GCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGAC...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR TCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGGTCCCGTGGGAGAGGTaGCAGCAGCAGGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQAVPWER*QQQGHA
Trigger: TGCGTGCCCCTGCTGCTGTCACCTCTCCCACGGGAC...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp CGGGGTGGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: RGGLRSALSSSFPGNRRTEQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...CGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCGGCGGGGCGGGACTTTaGGGAGGGCGGGGCCTAACG +
Preference number: 4 (lower is better)
Translates to: RWSPTSCSRSRARGAPPTGGAGL*GGRGLT
Trigger: CGTTAGGCCCCGCCCTCCCCAAAGTCCCGCCCCGCC...GGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGGGGCCATGGGCAGCTTaGCCTGCGGTGCCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RGGLRSALSSSFPGNRRTGPWAA*PAVPCL
Trigger: GAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCC...CGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp CAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: QPRGSPGECEGGGLQANWGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...CCAGTTCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GTGCAGCCACTTCTGGAGGCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCGTCCCCAGGGGAATGTaGAGGCGGAGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VQPLLEALRAALAVDVALVPRGM*RRRAPG
Trigger: GCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGAC...GAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTCCGAAGGACGCGAAATaGAGGGCAGGGCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: SGWARGSNPQRPARAARIPKDAK*RAGPSR
Trigger: CCTAGATGGCCCTGCCCTTCATTTCGCGTCCTTCGG...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGGGTGGGGCCGTGAATTaGGCGGGAAGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQGGAVN*AGRGWR
Trigger: TCTCCAGCCCCTTCCCGCCCAATTCACGGCCCCACC...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535669.6
CDS-3UTR TCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SGWARGSNPQRPARAARIGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp CCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTACCTCGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: PTSCSRSRARGAPPTRYLGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...GAGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp CAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTACCTCTCAGCCCCCTCTCAGGCTGTaGCAGCCTCAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QVVAGAGHAVRLRPVTSQPPLRL*QPQAGP
Trigger: AGGGCCCGCCTGAGGCTGGCACAGCCTGAGAGGGGG...CTGAGAGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp TTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGCCAGAGCCCCAGGGGGCAGGCACCCGCCATaGCCCAGCCACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: FQCQAGPRLEPTAARAPGGRHPP*PSHPTD
Trigger: GTCTGTGGGGTGGCTGGGGCATGGCGGGTGCCTGCC...CCCTGGGGCTCTGGCCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGCAGCTTGCCCTGCGGTaGCTTGTCTCCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQQLALR*LVSPVG
Trigger: CCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTG...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp TCTCAGGATGAGGACTTGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCAGCGGGCGGGGCGGGACTTTaGGGAGGGCGGGGCCTAACG +
Preference number: 4 (lower is better)
Translates to: SQDEDLEPVLRVVPAAAAGGAGL*GGRGLT
Trigger: CGTTAGGCCCCGCCCTCCCCAAAGTCCCGCCCCGCC...CGCTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGGCTTTCCCTGCGTACACCCAATCAGGGCTCCCTGAAGCTGGGCCGCCCCCACAGAGCCCCAGGGCCATaGGCAGCTTGCCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLSLRTPNQGSLKLGRPHRAPGP*AACPAV
Trigger: CACCGCAGGGCAAGCTGCCCATGGCCCTGGGGCTCT...GTGGGGGCGGCCCAGCTTCAGGGAGCCCTGATTGGGTGTACGCAGGGAAAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTGAGAAAGGTCAGGGGTaGGGCCGTGAATTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRGSTGTAAGLADEAGIAEKGQG*GRELGG
Trigger: CCCGCCCAATTCACGGCCCCACCCCTGACCTTTCTC...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535669.6
CDS-3UTR TCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGACACAGAAGAGGTGCTaGCAGTGGGGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQATQKRC*QWGRQG
Trigger: TCCCTGTCTCCCCCACTGTCAGCACCTCTTCTGTGT...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323906.9
ENST00000426897.6
CDS-3UTR TCA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: GRGSTGTAAGLADEAGIADSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TGGGGACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCCAGGCAGCAGGGAAGTaGCCAGCGCACGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: WGQEAVDESPRSRGRGDSQAAGK*PAHVTG
Trigger: CCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTG...GCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp CGGGGTGGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGGCAGGAGGCTTTCCCTaGGTACACCCAATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGGLRSALSSSFPGNRRTAGGFP*VHPIRA
Trigger: AGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGC...CGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GGCACGTGCGGCTCGCATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCATGGGCAGCTTGCCCTaGGGTGCCTTGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTCGSHFRRSALRCSCTLMGSLP*GALSPQ
Trigger: CTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCAT...GAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATGCGAGCCGCACGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTACCTCTTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PTSCSRSRARGAPPTRYLLCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...GAGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GTGCAGCCACTTCTGGAGGCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQPLLEALRAALAVDVALAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...GAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SGWARGSNPQRPARAARISWSCQ*GSRCRS
Trigger: GCTTCGGCATCTGGATCCTCATTGACAAGACCAGCT...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TCTCAGGATGAGGACTTGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCAGCGGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: SQDEDLEPVLRVVPAAAAGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...CGCTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp ATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IRLGPGLESPAPGTCGSHRYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...ATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAGTCCCCAGGGGAATGTaGAGGCGGAGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAGTAQMSALCLDRARCPVPRGM*RRRAPG
Trigger: GCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGAC...TGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GATGGGGACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: DGDRKLWTKAPGPVGEVTEQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...TGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQAVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp GCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCTCCCTGAAGCCAGCGCCCGGCACGTaGGGCTCGCATTTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AANSRRLSLRTPNQGSLKPAPGT*GSHFRR
Trigger: CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGG...CTTCAGGGAGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCACCAGCGCCCGGCACGTaGGGCTCGCATTTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPPAPGT*GSHFRR
Trigger: CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGG...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGCGGTCTCCTCGGGGTTaGTGCCGTACTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQRSPRG*CRTFGW
Trigger: CCATCCAAAAGTACGGCACCAACCCCGAGGAGACCG...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAAGGGCCGATCGCGGGTaGGGGCGGGGCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPRADRG*GRGQIT
Trigger: GGTGATCTGGCCCCGCCCCCACCCGCGATCGGCCCT...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp ATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: IRLGPGLESPAPGTCGSHHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...ATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGTCCAGCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRSSWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGCTGGA...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGCCAGAGCCCCAGGGTCCAGCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: FQCQAGPRLEPTAARAPGSSWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGCTGGA...CCCTGGGGCTCTGGCCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TTCTGCGCCCGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGGGCTGGTCCTCGTCTTaGACCCACAGCGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FCARTSSVRLVLVLNPQRGWSSS*THSGQS
Trigger: GCTCTGGCCGCTGTGGGTTCAAGACGAGGACCAGCC...CCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCGGGCGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTAGCAGAAGATCAGGCTaGCGAGGACGAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGWARGSNPQRPARAARISRRSG*RGRRRR
Trigger: TCTTCTTCTTCGTCCTCGGCAGCCTGATCTTCTGCT...AATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535669.6
CDS-3UTR GCA 90 bp GACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCTTATCTAGGGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: DRARCPSLLSWGKITLSREQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...CCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GRGSTGTAAGLADEAGIAVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp ATGACAGTCATCTGCGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCAGCCACCCCACAGACTaGCGCTGTGCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: MTVICGERGGRSQPIAGGSHPTD*RCARRR
Trigger: GCGGCGGCGGGCACAGCGGCAGTCTGTGGGGTGGCT...GCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp TGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTCGGTCTCCTCGGGGTTaGTGCCGTACTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: WSPTSCSRSRARGAPPTRRSPRG*CRTFGW
Trigger: CCATCCAAAAGTACGGCACCAACCCCGAGGAGACCG...ACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GTGCAGCCACTTCTGGAGGCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: VQPLLEALRAALAVDVALCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...GAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCGGGGACAGGAAGCTGTaGACGAAAGCCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LCLDRARCPSLLSWGKITGDRKL*TKAPGP
Trigger: GGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCC...GGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR CAA 72 bp GTGCGCCTCCGACCCGTTACCTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTAGTGCCAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRLRPVTSQDED*EPVLRVVPAAA
Trigger: TGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp CAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QGQRRCLHCVWTAPGVQAAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...GGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp CAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGATATCGAGAGCGTCATaGACCCGAGCTCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QPRGSPGECEGGGLQANWISRAS*TRARVG
Trigger: GCCTACTCGAGCTCGGGTTCATGACGCTCTCGATAT...CCAGTTCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCTGAGAGGCCACCAGTaGGGCTGGGCCTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: WSRWSPTSCSRSRARGAPLRGHQ*GWALSS
Trigger: GGAAGATAAGGCCCAGCCTCACTGGTGGCCTCTCAG...AGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQASPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp CTAGGATTGTGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: LGLWSRWSPTSCSRSRAREQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...GCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCACAATCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGCTTTGGAGCTGTTTATaGCTGTCTCCCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQALWSCL*LSPLVQ
Trigger: CTGGACCAAGGGAGACAGGCATAAACAGCTCCAAAG...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp ACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCTCAGGCGGGCCCTGTaGATCTCTGGGCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TVSGPRQVSKPAELGQDHLRRAL*ISGPVS
Trigger: TGAGACTGGCCCAGAGATGCACAGGGCCCGCCTGAG...GTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp GCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAAGCAGAAGATCAGGCTaGCGAGGACTTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARSHVGPQGNVKAEGSRRSRRSG*RGLDEA
Trigger: AGCCTCATCAAGTCCTCGGCAGCCTGATCTTCTGCT...TCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426897.6
CDS-3UTR CCA 90 bp GCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: ARSHVGPQGNVKAEGSRRGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...TCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CCA 90 bp GAGGCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: EALRAALAVDVALCRDSAGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...TGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCT +
Preference number: 4 (lower is better)
Translates to: GRGSTGTAAGLADEAGIAPSLLS*GKITLS
Trigger: AGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGG...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGCAGGGGACAGGAAGCTGTaGACGAAAGCCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: DRKLWTKAPGPVGEVTAAGDRKL*TKAPGP
Trigger: GGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCC...TGCTGCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCACGTCAGCGATCAGGCTaGGCCCGGGGCTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPRQRSG*ARGSNP
Trigger: GGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACG...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCAGAGCCCCAGGGCCATaGGCAGCTTGCCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGRAPGP*AACPAV
Trigger: CACCGCAGGGCAAGCTGCCCATGGCCCTGGGGCTCT...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp CAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QIFTGSREVPSARDGGGAGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...CGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp ATGACAGTCATCTGCGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: MTVICGERGGRSQPIAGGGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...GCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GGCACGTGCGGCTCGCATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCGTACGCTCAGCACCATaGCAGTCATCTGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GTCGSHFRRSALRCSCTLVRSAP*QSSAEK
Trigger: TTTCTCCGCAGATGACTGTCATGGTGCTGAGCGTAC...GAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATGCGAGCCGCACGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAAGCAGAAGATCAGGCTaGCGAGGACGAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARSHVGPQGNVKAEGSRRSRRSG*RGRRRR
Trigger: TCTTCTTCTTCGTCCTCGGCAGCCTGATCTTCTGCT...TCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323906.9
ENST00000391859.6
CDS-3UTR GCA 90 bp CGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: RAALAVDVALCRDSADVCVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...GCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARSHVGPQGNVKAEGSRREIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...TCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR GCA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRGSTGTAAGLADEAGIAEIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp CATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCTCCGGCGGAGTGCCCTaGGCTGTAGCTGTACGCTCA +
Preference number: 4 (lower is better)
Translates to: HFRRSALRCSCTLSTMTVSGGVP*AVAVRS
Trigger: TGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGA...GACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCGGCAGGCACCCGCCATaGCCCAGCCACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GSKPRVLYFGGSSVFPLCGRHPP*PSHPTD
Trigger: GTCTGTGGGGTGGCTGGGGCATGGCGGGTGCCTGCC...GCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGCGGTCTCCTCGGGGTTaGTGCCGTACTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: QIFTGSREVPSARDGGGARSPRG*CRTFGW
Trigger: CCATCCAAAAGTACGGCACCAACCCCGAGGAGACCG...CGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGTGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCATCTGCGGAGAACGTCAGCGATCAGGCTaGGCCCGGGGCTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: SALRCSCTLSTMTVICGERQRSG*ARGSNP
Trigger: GGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACG...TTCTCCGCAGATGACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCACCTTGTCTCCCCAGTTaGGGCAGGCACCCGCCATGC +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPPCLPS*GRHPPC
Trigger: GCATGGCGGGTGCCTGCCCCAACTGGGGAGACAAGG...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGCAACACAGAAGAGGTGCTaGCAGTGGGGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: DRKLWTKAPGPVGEVTAATQKRC*QWGRQG
Trigger: TCCCTGTCTCCCCCACTGTCAGCACCTCTTCTGTGT...TGCTGCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323906.9
ENST00000426897.6
CDS-3UTR TCA 90 bp GACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGCAGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: DRKLWTKAPGPVGEVTAAGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...TGCTGCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR TCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGTCCCGTGGGAGAGGTaGCAGCAGCAGGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAVPWER*QQQGHA
Trigger: TGCGTGCCCCTGCTGCTGTCACCTCTCCCACGGGAC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR TCA 90 bp CCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCAAGCTTCGCTCCAGCTaGGAGGCCACCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGRCGSLQGQRRCLHCVKLRSS*EATSEA
Trigger: AGCCTCACTGGTGGCCTCTCAGCTGGAGCGAAGCTT...GACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp TGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: WSPTSCSRSRARGAPPTRSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...ACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGCAGGCAGCAGGGAAGTaGCCAGCGCACGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLQANWGLNKYLQAAGQAAGK*PAHVTG
Trigger: CCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTG...CCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCACAGCTTGCCCTGCGGTaGCTTGTCTCCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPQLALR*LVSPVG
Trigger: CCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTG...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp CACCATGACAGTCATCTGCGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGGGGCCATGGGCAGCTTaGCCTGCGGTGCCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: HHDSHLRRKGREIAANSRGPWAA*PAVPCL
Trigger: GAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCC...CCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: GTQPRGSPGECEGGGLQALVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CCA 90 bp CGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: RWSPTSCSRSRARGAPPTPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...GGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCAGGGCCGATCGCGGGTaGGGGCGGGGCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVRADRG*GRGQIT
Trigger: GGTGATCTGGCCCCGCCCCCACCCGCGATCGGCCCT...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TCCCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SQLSSAAVSSGLVPYFWMSWSCQ*GSRCRS
Trigger: GCTTCGGCATCTGGATCCTCATTGACAAGACCAGCT...CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp CAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QIFTGSREVPSARDGGGASWSCQ*GSRCRS
Trigger: GCTTCGGCATCTGGATCCTCATTGACAAGACCAGCT...CGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TCCCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQLSSAAVSSGLVPYFWMRYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp AGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGTCCCGTGGGAGAGGTaGCAGCAGCAGGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: RRRAPGELGIKQIFTGSRVPWER*QQQGHA
Trigger: TGCGTGCCCCTGCTGCTGTCACCTCTCCCACGGGAC...CCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR TCA 90 bp GCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCACACAGAAGAGGTGCTaGGGGGCCTTGGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: AQMSALCLDRARCPSLLSTQKRC*GALEFV
Trigger: CACAAATTCCAAGGCCCCTCAGCACCTCTTCTGTGT...GCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR TCA 90 bp GCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCTCCCTGAAGCCGAAGGACGCGAAATaGAGGGCAGGGCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: AANSRRLSLRTPNQGSLKPKDAK*RAGPSR
Trigger: CCTAGATGGCCCTGCCCTTCATTTCGCGTCCTTCGG...CTTCAGGGAGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPDSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp CCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCCGTTACCTCGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PTSCSRSRARGAPPTRYLEIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...GAGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGCGTGGTCCAGGTTTCTaGACAGGAATATCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRRGPGF*TGISRA
Trigger: CGCTCTCGATATTCCTGTGCAGAAACCTGGACCACG...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGCCCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: GPARSPRGRCGSLQGQRRLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...TCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp TCCCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCT +
Preference number: 4 (lower is better)
Translates to: SQLSSAAVSSGLVPYFWMPSLLS*GKITLS
Trigger: AGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGG...CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCTTATCTAGGTGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: DRARCPSLLSWGKITLSRCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...CCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGTTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGGLQANWGLNKYLQAAGLCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...CCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTTTTGGATGGTTTTCTCTACGACGTCCCGCAAGCTTCGCTCCAGCTGAGAGGCTTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLDGFLYDVPQASLQLRGLCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...GCCTCTCAGCTGGAGCGAAGCTTGCGGGACGTCGTAGAGAAAACCATCCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CCA 90 bp AGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGGGCGGGGCGGGACTTTaGGGAGGGCGGGGCCTAACG +
Preference number: 4 (lower is better)
Translates to: RAPGELGIKQIFTGSREVGGAGL*GGRGLT
Trigger: CGTTAGGCCCCGCCCTCCCCAAAGTCCCGCCCCGCC...CACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCCTCACCTTGTCTCCCCAGTTaGGGCAGGCACCCGCCATGC +
Preference number: 4 (lower is better)
Translates to: ASPGSFILEAHLSSPSASPCLPS*GRHPPC
Trigger: GCATGGCGGGTGCCTGCCCCAACTGGGGAGACAAGG...TGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAACACAGAAGAGGTGCTaGCAGTGGGGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPTQKRC*QWGRQG
Trigger: TCCCTGTCTCCCCCACTGTCAGCACCTCTTCTGTGT...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: DVALCRDSADVCTVSGPRSWSCQ*GSRCRS
Trigger: GCTTCGGCATCTGGATCCTCATTGACAAGACCAGCT...GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TCCCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SQLSSAAVSSGLVPYFWMHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCGTCCCCAGGGGAATGTaGAGGCGGAGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCVPRGM*RRRAPG
Trigger: GCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGAC...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp CAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QIFTGSREVPSARDGGGAEIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...CGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAGCAGGAGGCTTTCCCTaGGTACACCCAATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPAGGFP*VHPIRA
Trigger: AGCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGC...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGGAGGGCGGGGCCTAACGGTATCGAGCGAGCCGGTTGTAGACGTGGTCCAGGTTGCCGTACTTTTGGATaGTTTTCTCTACGACGTCCC +
Preference number: 4 (lower is better)
Translates to: GRAGPNGIERAGCRRGPGCRTFG*FSLRRP
Trigger: GGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCA...ACCTGGACCACGTCTACAACCGGCTCGCTCGATACCGTTAGGCCCCGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTAGGATTGTGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCCGGTCTCCTCGGGGTTaGTGCCGTACTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: LGLWSRWSPTSCSRSRARRSPRG*CRTFGW
Trigger: CCATCCAAAAGTACGGCACCAACCCCGAGGAGACCG...GCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCACAATCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGCCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: QIFTGSREVPSARDGGGAPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...CGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp ACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCT +
Preference number: 4 (lower is better)
Translates to: TVSGPRQVSKPAELGQDHPSLLS*GKITLS
Trigger: AGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGG...GTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCATGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp AGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SADVCTVSGPRQVSKPAEHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...CTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGGCAGCGGAGCTCCTTaGGGGCCCCCACACAACCCA +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQAGSGAP*GPPHNP
Trigger: TGGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCC...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp AGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGGTTTCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPRPRSPRGWCRTFGWFRYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCGGCTGGTCCTCGTCTTaGACCCACAGCGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVGWSSS*THSGQS
Trigger: GCTCTGGCCGCTGTGGGTTCAAGACGAGGACCAGCC...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCAGTGGGGGTAGAGGCTaGGAAGGAGTAAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGSGGRG*EGVRSE
Trigger: TTCCGACCTTACTCCTTCTCAGCCTCTACCCCCACT...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAAGTGGGGGTAGAGGCTaGGAAGGAGTAAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPSGGRG*EGVRSE
Trigger: TTCCGACCTTACTCCTTCTCAGCCTCTACCCCCACT...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGAGCAGGGCACGCGGTaGGCCTCCGACCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQAEQGTR*ASDPLP
Trigger: AGGTAACGGGTCGGAGGCGCACCGCGTGCCCTGCTC...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGADSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp AGGCCGACGCCCAGGCAAATGCCCACTATGGAAATAAGGTTGTTGTGCAGCCACGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: RPTPRQMPTMEIRLLCSHDSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...GTGGCTGCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGGCGTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp GACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCTTATCTAGGCGTGGTCCAGGTTTCTaGACAGGAATATCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: DRARCPSLLSWGKITLSRRGPGF*TGISRA
Trigger: CGCTCTCGATATTCCTGTGCAGAAACCTGGACCACG...CCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR GCA 90 bp CATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCAGCAGAAGATCAGGCTaGCGAGGACTTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: HFRRSALRCSCTLSTMTVSRRSG*RGLDEA
Trigger: AGCCTCATCAAGTCCTCGGCAGCCTGATCTTCTGCT...GACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598095.5
CDS-3UTR GCA 90 bp TCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTTCCGGCGGAGTGCCCTaGGCTGTAGCTGTACGCTCA +
Preference number: 4 (lower is better)
Translates to: SEASPGSFILEAHLSSPSSGGVP*AVAVRS
Trigger: TGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGA...AGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTATGGGCAGCTTGCCCTaGGGTGCCTTGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SEASPGSFILEAHLSSPSMGSLP*GALSPQ
Trigger: CTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCAT...AGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp ATGACAGTCATCTGCGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: MTVICGERGGRSQPIAGGCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...GCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCCTCAACACAGAAGAGGTGCTaGCAGTGGGGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: ASPGSFILEAHLSSPSASTQKRC*QWGRQG
Trigger: TCCCTGTCTCCCCCACTGTCAGCACCTCTTCTGTGT...TGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTCCAGCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: GGLQANWGLNKYLQAAGKSSWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGCTGGA...CTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GTTGTAGACGTGGTCCAGGTTTCTGCACAGGAATATCGAGAGCGTCATGAACCCTCCAGCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: VVDVVQVSAQEYRERHEPSSWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGCTGGA...GGGTTCATGACGCTCTCGATATTCCTGTGCAGAAACCTGGACCACGTCTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595725.5
CDS-3UTR TCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTCCAGCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVSSWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGCTGGA...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGRYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp ATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: IKQIFTGSREVPSARDGGDSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...GCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGCAGGCAGCAGGGAAGTaGCCAGCGCACGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: ECEGGGLQANWGLNKYLQQAAGK*PAHVTG
Trigger: CCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTG...CTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GATGGGGACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACATGCCGTACTTTTGGATaGTTTTCTCTACGACGTCCC +
Preference number: 4 (lower is better)
Translates to: DGDRKLWTKAPGPVGEVTCRTFG*FSLRRP
Trigger: GGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCA...TGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCATTGTGCAGCCACTTCTaGAGGCCCTGCGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQALCSHF*RPCAQP
Trigger: GGGCTGCGCGCAGGGCCTCCAGAAGTGGCTGCACAA...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCGGGGACAGGAAGCTGTaGACGAAAGCCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCGDRKL*TKAPGP
Trigger: GGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCC...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CCA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCGGCACCAAGGACTCATaGGGCAGTCCCTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCGTKDS*GSPSQV
Trigger: GACCTGGGAGGGACTGCCCCATGAGTCCTTGGTGCC...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CCA 90 bp TCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCCCGTGTGTTTCCCTTTaGAGCTGTTTATGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLQGQRRCLHCVWTAPGVPCVSL*SCLCLS
Trigger: AGACAGGCATAAACAGCTCCAAAGGGAAACACACGG...GACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
3UTR CAA 72 bp GGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTaGGAGGCTCATCTGTCTTCCCCCTCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GVRSEASPGSFI*EAHLSSPSASA
Trigger: GGCTGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCGCAGCTCTCCTGGGCTaGCATCTTCACCTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVAALLG*HLHLVG
Trigger: CCCCACTAGGTGAAGATGTCAGCCCAGGAGAGCTGC...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TCGAGTAGGCCGACGCCCAGGCAAATGCCCACTATGGAAATAAGGTTGTTGTGCGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SSRPTPRQMPTMEIRLLCGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...GCACAACAACCTTATTTCCATAGTGGGCATTTGCCTGGGCGTCGGCCTACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGATATCGAGAGCGTCATaGACCCGAGCTCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GGGLQANWGLNKYLQAAGISRAS*TRARVG
Trigger: GCCTACTCGAGCTCGGGTTCATGACGCTCTCGATAT...CCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCATCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTCCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LAVDVALCRDSADVCTVSPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...AGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCCCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: REIAANSRRLSLRTPNQGPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR TCA 90 bp TGGTCCAGGTTTCTGCACAGGAATATCGAGAGCGTCATGAACCCGAGCTCGAGTATATCGAGAGCGTCATaGACCCGAGCTCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: WSRFLHRNIESVMNPSSSISRAS*TRARVG
Trigger: GCCTACTCGAGCTCGGGTTCATGACGCTCTCGATAT...ACTCGAGCTCGGGTTCATGACGCTCTCGATATTCCTGTGCAGAAACCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTCTTTCTGGGCCCGCTaGGTGGAGATGAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: GGLQANWGLNKYLQAAGKSFWAR*VEMRIP
Trigger: GGGAATCCTCATCTCCACTCAGCGGGCCCAGAAAGA...CTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGATLDQI*RGTKAK
Trigger: CTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGT...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp AGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGGACAGCGCAGATGTCTaGACTGTGTCTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: RAPGELGIKQIFTGSREVDSADV*TVSGPR
Trigger: GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTC...CACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GAAAGGGGAGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCATGCCGTACTTTTGGATaGTTTTCTCTACGACGTCCC +
Preference number: 4 (lower is better)
Translates to: ERGGRSQPIAGGFPCVHPCRTFG*FSLRRP
Trigger: GGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCA...TGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCTCCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CATTTCCGGCGGAGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: HFRRSALRCSCTLSTMTVLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...GACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACTCCGCCGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSKPRVLYFGGSSVFPLCGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...GCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp AGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCATCTGCGGAGAACCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: SALRCSCTLSTMTVICGEPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...TTCTCCGCAGATGACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp GCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCCTCACCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCT +
Preference number: 4 (lower is better)
Translates to: ASPGSFILEAHLSSPSASPSLLS*GKITLS
Trigger: AGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGG...TGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp CTTTTGGATGGTTTTCTCTACGACGTCCCGCAAGCTTCGCTCCAGCTGAGAGGCTATGCCTGTCTCCCTTaGTCCAGGTCGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLDGFLYDVPQASLQLRGYACLP*SRSVCL
Trigger: AAGACACACCGACCTGGACCAAGGGAGACAGGCATA...GCCTCTCAGCTGGAGCGAAGCTTGCGGGACGTCGTAGAGAAAACCATCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CCA 90 bp GGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGGGCCCTGTGCATCTCTaGGCCAGTCTCAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: GGGLQANWGLNKYLQAAGGPVHL*ASLKSL
Trigger: TAAGGATTTGAGACTGGCCCAGAGATGCACAGGGCC...CCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR TCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAACACAGAAGAGGTGCTaGCAGTGGGGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPTQKRC*QWGRQG
Trigger: TCCCTGTCTCCCCCACTGTCAGCACCTCTTCTGTGT...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGAHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPGRCPW*RFLRWP
Trigger: TGGCCATCTCAGGAATCTTCACCATGGGCATCGCCC...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp ATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCCGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IKQIFTGSREVPSARDGGRYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...GCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp GTTGTAGACGTGGTCCAGGTTTCTGCACAGGAATATCGAGAGCGTCATGAACCCATATCGAGAGCGTCATaGACCCGAGCTCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VVDVVQVSAQEYRERHEPISRAS*TRARVG
Trigger: GCCTACTCGAGCTCGGGTTCATGACGCTCTCGATAT...GGGTTCATGACGCTCTCGATATTCCTGTGCAGAAACCTGGACCACGTCTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR TCA 90 bp CTAGGATTGTGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGTCTCAAATCCTTACTaGATGGCTAGCTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LGLWSRWSPTSCSRSRARVSNPY*MASSVY
Trigger: GTACACAGAGCTAGCCATTCAGTAAGGATTTGAGAC...GCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCACAATCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp GGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGGTAGATGTGGCTCTCTaGAGGGACAGCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GGLQANWGLNKYLQAAGKVDVAL*RDSADV
Trigger: GACATCTGCGCTGTCCCTGCAGAGAGCCACATCTAC...CTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCACGGTCTCCTCGGGGTTaGTGCCGTACTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQARSPRG*CRTFGW
Trigger: CCATCCAAAAGTACGGCACCAACCCCGAGGAGACCG...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGCCAAGCCTGCTGAGCTaGGGCAAGATCACCTTATCT +
Preference number: 4 (lower is better)
Translates to: RRRAPGELGIKQIFTGSRPSLLS*GKITLS
Trigger: AGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGG...CCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCATGTCTGCACTGTGTCTaGACCGCGCCAGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPCLHCV*TAPGVQ
Trigger: TTGGACACCTGGCGCGGTCCAGACACAGTGCAGACA...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGGTGCTGAGGGGCCTTaGAATTTGTGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPGAEGP*NLWAPR
Trigger: CCTTGGTGCCCACAAATTCCAAGGCCCCTCAGCACC...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR TCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCGTACGCTCAGCACCATaGCAGTCATCTGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVVRSAP*QSSAEK
Trigger: TTTCTCCGCAGATGACTGTCATGGTGCTGAGCGTAC...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR GCA 90 bp ATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: IKQIFTGSREVPSARDGGEIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...GCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCGTGGTCCAGGTTTCTaGACAGGAATATCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCRGPGF*TGISRA
Trigger: CGCTCTCGATATTCCTGTGCAGAAACCTGGACCACG...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp TGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGCGTGGTCCAGGTTTCTaGACAGGAATATCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: WGLNKYLQAAGKCPAHVTRGPGF*TGISRA
Trigger: CGCTCTCGATATTCCTGTGCAGAAACCTGGACCACG...CGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGTGCCGTACTTTTGGATaGTTTTCTCTACGACGTCCC +
Preference number: 4 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGACRTFG*FSLRRP
Trigger: GGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCA...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp AGGTTTCTGCACAGGAATATCGAGAGCGTCATGAACCCGAGCTCGAGTAGGCCGTGCCGTACTTTTGGATaGTTTTCTCTACGACGTCCC +
Preference number: 4 (lower is better)
Translates to: RFLHRNIESVMNPSSSRPCRTFG*FSLRRP
Trigger: GGGACGTCGTAGAGAAAACCATCCAAAAGTACGGCA...CGGCCTACTCGAGCTCGGGTTCATGACGCTCTCGATATTCCTGTGCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp ATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCCCTTATCTAGGATTGTaGAGTCGTTGGTCGCCGACA +
Preference number: 4 (lower is better)
Translates to: IKQIFTGSREVPSARDGGPYLGL*SRWSPT
Trigger: TGTCGGCGACCAACGACTCCACAATCCTAGATAAGG...GCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQASWSCQ*GSRCRS
Trigger: GCTTCGGCATCTGGATCCTCATTGACAAGACCAGCT...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGCATGGTGAAGATTCCTaGGATGGCCAGGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: WGLNKYLQAAGKCPAHVTHGEDS*DGQDFG
Trigger: TCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATG...CGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR TCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCACGTTACCTCTCAGGATaGGGACTTGGAACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQARYLSG*GLGTSP
Trigger: AGGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACG...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp TGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: WGLNKYLQAAGKCPAHVTSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...CGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCGAAATAAGGTTGTTGTaGAGCCACTTCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVEIRLL*SHFWRP
Trigger: GGGCCTCCAGAAGTGGCTGCACAACAACCTTATTTC...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CCA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGGATTGTGGAGTCGTTaGTCGCCGACAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CEGGGLQANWGLNKYLQAGLWSR*SPTSCS
Trigger: GCTACAACTTGTCGGCGACCAACGACTCCACAATCC...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp CTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAAGCAGAAGATCAGGCTaGCGAGGACGAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQANWGLNKYLQAAGKCPSRRSG*RGRRRR
Trigger: TCTTCTTCTTCGTCCTCGGCAGCCTGATCTTCTGCT...TGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CCA 90 bp ATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: IKQIFTGSREVPSARDGGLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...GCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR GCA 90 bp GGCCAGTCTCAAATCCTTACTGAATGGCTAGCTCTGTGTACTTCAGGTCTGTCTAGCAGAAGATCAGGCTaGCGAGGACGAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GQSQILTEWLALCTSGLSSRRSG*RGRRRR
Trigger: TCTTCTTCTTCGTCCTCGGCAGCCTGATCTTCTGCT...AGACAGACCTGAAGTACACAGAGCTAGCCATTCAGTAAGGATTTGAGACTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR GCA 90 bp GAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGTCTCCTCGGGGTTGGTaGCGTACTTTTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: ECEGGGLQANWGLNKYLQSPRGW*RTFGWF
Trigger: AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGA...CTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CCA 90 bp GAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGTTGGTGCCGTACTTTTaGATGGTTTTCTCTACGACG +
Preference number: 4 (lower is better)
Translates to: ECEGGGLQANWGLNKYLQLVPYF*MVFSTT
Trigger: CGTCGTAGAGAAAACCATCCAAAAGTACGGCACCAA...CTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGGGGTGGGGCCGTGAATaGGGCGGGAAGGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRGWGRE*GGKGLE
Trigger: CTCCAGCCCCTTCCCGCCCAATTCACGGCCCCACCC...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000535669.6
CDS-3UTR CAA 90 bp CCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGAGAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: PGARIPSARHVRLAFPAERQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...CTCCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp ATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTGCCCTGCGGTGCCTaGTCTCCCCAGTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: IRLGPGLESPAPGTCGSHLPCGA*SPQLGQ
Trigger: CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAA...ATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp CGCCGCCGCCGTCAGCGATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: RRRRQRSGWARGSNPQRPSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...CGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACGGCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp CGCCGCCGCCGTCAGCGATCAGGCTGGGCCCGGGGCTCGAATCCCCAGCGCCCGTCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: RRRRQRSGWARGSNPQRPSPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...CGGGCGCTGGGGATTCGAGCCCCGGGCCCAGCCTGATCGCTGACGGCGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp GGCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: GTQPRGSPGECEGGGLQAAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...CGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CAA 90 bp GGCCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGTCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GPGLESPAPGTCGSHFRRSPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...CCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RGGLRSALSSSFPGNRRTEMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...CGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp TGGGGACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: WGQEAVDESPRSRGRGDSRQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...GCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CAA 90 bp AGGCTTTCCCTGCGTACACCCAATCAGGGCTCCCTGAAGCTGGGCCGCCCCCACAGGGCCATGGGCAGCTaGCCCTGCGGTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RLSLRTPNQGSLKLGRPHRAMGS*PCGALS
Trigger: AGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCT...GTGGGGGCGGCCCAGCTTCAGGGAGCCCTGATTGGGTGTACGCAGGGAAAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp CGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTCCGACCGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: RWSPTSCSRSRARGAPPTAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...GGTCGGAGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp CCCGGGGCTCGAATCCCCAGCGCCCGGCACGTGCGGCTCGCATTTCCGGCGGAGCCAGGGTCCTTTATTTaGGAGGCTCATCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGARIPSARHVRLAFPAEPGSFI*EAHLSS
Trigger: GGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGG...CTCCGCCGGAAATGCGAGCCGCACGTGCCGGGCGCTGGGGATTCGAGCCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS TCA 90 bp CTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGCGAAATaGAGGGCAGGGCCATCTAGGGATTTAGGGCCGATCGCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LRPELVLPRQPKDAK*RAGPSRDLGPIAGG
Trigger: CCCACCCGCGATCGGCCCTAAATCCCTAGATGGCCCTGCCCTTCATTTCGCGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535669.6
ENST00000597852.5
ENST00000598095.5
CDS-3UTR CAA 90 bp AGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: RCGSLQGQRRCLHCVWTARQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...CGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp AGGCTTTCCCTGCGTACACCCAATCAGGGCTCCCTGAAGCTGGGCCGCCCCCACGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: RLSLRTPNQGSLKLGRPHAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...GTGGGGGCGGCCCAGCTTCAGGGAGCCCTGATTGGGTGTACGCAGGGAAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp GCACGCAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGATCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: ARSHVGPQGNVKAEGSRRSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...TCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CAA 90 bp CCCAGGGCCATGGGCAGCTTGCCCTGCGGTGCCTTGTCTCCCCAGTTGGGGCAGTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: PRAMGSLPCGALSPQLGQSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGCAGGCTGCCGAGGACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRQAAED*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTCCTCGGCAGCCTG...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426897.6
CDS-3UTR CAA 90 bp TTCTGCGCCCGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGTTGCCCTGCGGTGCCTaGTCTCCCCAGTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FCARTSSVRLVLVLNPQRLPCGA*SPQLGQ
Trigger: CTGCCCCAACTGGGGAGACAAGGCACCGCAGGGCAA...CCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCGGGCGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp TGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGGTGCGCCTGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: WSRWSPTSCSRSRARGAPAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...AGGCGCACCGCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCGCCTTGTCTCCCCAGTaGGGGCAGGCACCCGCCATG +
Preference number: 5 (lower is better)
Translates to: REIAANSRRLSLRTPNQGALSPQ*GQAPAM
Trigger: CATGGCGGGTGCCTGCCCCAACTGGGGAGACAAGGC...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGREMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GGGCACGCGGTGCGCCTCCGACCCGTTACCTCTCAGGATGAGGACTTGGAACCAGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GHAVRLRPVTSQDEDLEPEMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...TGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCACCGCGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTGCGCTCCGCCCTGAGCTCGTCCTTCCCAGGCAACCGAAGGACGGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: RGGLRSALSSSFPGNRRTVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...CGTCCTTCGGTTGCCTGGGAAGGACGAGCTCAGGGCGGAGCGCAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp TTCTGCGCCCGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGGCGGTCTCCTCGGGGTaGGTGCCGTACTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: FCARTSSVRLVLVLNPQRAVSSG*VPYFWM
Trigger: CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGC...CCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCGGGCGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp AGTGCCCTGCGCTGTAGCTGTACGCTCAGCACCATGACAGTCATCTGCGGAGAAGCCTTGTCTCCCCAGTaGGGGCAGGCACCCGCCATG +
Preference number: 5 (lower is better)
Translates to: SALRCSCTLSTMTVICGEALSPQ*GQAPAM
Trigger: CATGGCGGGTGCCTGCCCCAACTGGGGAGACAAGGC...TTCTCCGCAGATGACTGTCATGGTGCTGAGCGTACAGCTACAGCGCAGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp GGGCGGGGCTCGACGGGAACTGCCGCAGGGCTGGCTGATGAGGCGGGAATAGCTCCAGGGTCCTTTATTTaGGAGGCTCATCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GRGSTGTAAGLADEAGIAPGSFI*EAHLSS
Trigger: GGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGG...AGCTATTCCCGCCTCATCAGCCAGCCCTGCGGCAGTTCCCGTCGAGCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS CCA 90 bp ATGAGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACCTaGGGAGAGGAGATGCGGATACGGGGGTGGGCCACAGGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: MRIQMPKQKIRLPRT*GEEMRIRGWATGED
Trigger: ATCTTCCCCTGTGGCCCACCCCCGTATCCGCATCTCCTCTCCCCAGGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593512.5
ENST00000598134.1
CDS-3UTR CAA 90 bp GACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGCAGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: DRKLWTKAPGPVGEVTAAEMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...TGCTGCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CAA 90 bp GATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: DVALCRDSADVCTVSGPREMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...GCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp TTCTGCGCCCGCACTTCCAGTGTCAGGCTGGTCCTCGTCTTGAACCCACAGCGGGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: FCARTSSVRLVLVLNPQREMART*DQICRG
Trigger: GCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTC...CCGCTGTGGGTTCAAGACGAGGACCAGCCTGACACTGGAAGTGCGGGCGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp TTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: LNKYLQAAGKCPAHVTGARQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...CGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCCTCAAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: ASPGSFILEAHLSSPSASRQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...TGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp CCTGCGCGCAGCCCTCGCGGTAGATGTGGCTCTCTGCAGGGACAGCGCAGATGTTCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: PARSPRGRCGSLQGQRRCSPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...ACATCTGCGCTGTCCCTGCAGAGAGCCACATCTACCGCGAGGGCTGCGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GGGAGGGCGGGGCCTAACGGTATCGAGCGAGCCGGTTGTAGACGTGGTCCAGGTTCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GRAGPNGIERAGCRRGPGSPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...ACCTGGACCACGTCTACAACCGGCTCGCTCGATACCGTTAGGCCCCGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp CTGTGTCTGGACCGCGCCAGGTGTCCAAGCCTGCTGAGCTGGGGCAAGATCACCGAGGGGCCTTGGAATTaGTGGGCACCAAGGACTCAT +
Preference number: 5 (lower is better)
Translates to: LCLDRARCPSLLSWGKITEGPWN*WAPRTH
Trigger: ATGAGTCCTTGGTGCCCACAAATTCCAAGGCCCCTC...GGTGATCTTGCCCCAGCTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CAA 90 bp TCCCAGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGTTATGCCTGTCTCCCTaGGTCCAGGTCGGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: SQLSSAAVSSGLVPYFWMLCLSP*VQVGVS
Trigger: AGACACACCGACCTGGACCAAGGGAGACAGGCATAA...CATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CAA 90 bp AAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGGGGGCGGGGCGGACGAAGAGGAAGTACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KYLQAAGKCPAHVTGAGRTKRKY*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTACTTCCTCTTCGT...CCGCCCCGCCCCCGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp CAGCCACGTGGGTCCCCAGGGGAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: QPRGSPGECEGGGLQANWVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...CCAGTTCGCCTGGAGCCCTCCGCCTTCACATTCCCCTGGGGACCCACGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp TCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGCCAGGTGTCTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: SLQGQRRCLHCVWTAPGVSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...GACACCTGGCGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GAGAGCGTCATGAACCCGAGCTCGAGTAGGCCGACGCCCAGGCAAATGCCCACTTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: ESVMNPSSSRPTPRQMPTSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...AGTGGGCATTTGCCTGGGCGTCGGCCTACTCGAGCTCGGGTTCATGACGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp CACCATGACAGTCATCTGCGGAGAAAGGGGAGGGAGATCGCAGCCAATAGCAGGCAGGCTGCCGAGGACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HHDSHLRRKGREIAANSRQAAED*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTCCTCGGCAGCCTG...CCTGCTATTGGCTGCGATCTCCCTCCCCTTTCTCCGCAGATGACTGTCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598095.5
CDS CCA 90 bp TTTGCCGGAAGAAGACTCAGGCTCCAAGAAGCCTCCGGTGAGCAGTaGATGGGAGCCTGTAGCCTGCCCACAAAGGACACGAAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: FAGRRLRLQEASGEQ*MGACSLPTKDTKLV
Trigger: GACCAGCTTCGTGTCCTTTGTGGGCAGGCTACAGGCTCCCATCCACTGCTCACCGGAGGCTTCTTGGAGCCTGAGTCTTCTTCCGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS-3UTR CAA 90 bp GACAGGAAGCTGTGGACGAAAGCCCCAGGTCCCGTGGGAGAGGTGACAGCAGCATCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: DRKLWTKAPGPVGEVTAASPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...TGCTGCTGTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
CDS-3UTR CAA 90 bp AGATGTGGCTCTCTGCAGGGACAGCGCAGATGTCTGCACTGTGTCTGGACCGCGACGAAGAGGAAGTACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RCGSLQGQRRCLHCVWTATKRKY*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTACTTCCTCTTCGT...CGCGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGAGAGCCACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp TGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAAGGCAGCGGAGCTCCTaGAGGGCCCCCACACAACCC +
Preference number: 5 (lower is better)
Translates to: CEGGGLQANWGLNKYLQARQRSS*RAPTQP
Trigger: GGGTTGTGTGGGGGCCCTCAAGGAGCTCCGCTGCCT...TGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp AGCTCTCCTCGGCCGCGGTCTCCTCGGGGTTGGTGCCGTACTTTTGGATGGTTTCCCGTGTGTTTCCCTTaGGAGCTGTTTATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSPRPRSPRGWCRTFGWFPVCFP*ELFMPV
Trigger: GACAGGCATAAACAGCTCCAAAGGGAAACACACGGG...AAACCATCCAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CAA 90 bp AGGAGTAAGGTCGGAAGCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCAGGGCCATGGGCAGCTaGCCCTGCGGTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RSKVGSKPRVLYFGGSSVRAMGS*PCGALS
Trigger: AGACAAGGCACCGCAGGGCAAGCTGCCCATGGCCCT...GACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGCTTCCGACCTTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS TCA 90 bp GCACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACGA +
Preference number: 5 (lower is better)
Translates to: ARRPSPQRTRSWSCQ*GSRCRSRRSGCRGR
Trigger: TCGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000535669.6
ENST00000596426.5
ENST00000597033.5
CDS TCA 90 bp GCACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACCT +
Preference number: 5 (lower is better)
Translates to: ARRPSPQRTRSWSCQ*GSRCRSRRSGCRGP
Trigger: AGGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593512.5
ENST00000598134.1
CDS TCA 90 bp GAGCCTGTAGCCTGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACGA +
Preference number: 5 (lower is better)
Translates to: EPVACPQRTRSWSCQ*GSRCRSRRSGCRGR
Trigger: TCGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCAGGCTACAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS GCA 90 bp CCCATGGTGAAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PMVKIPEMARTLDQI*RGTKAKPTKDTKLV
Trigger: GACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS-3UTR CAA 90 bp AGGGAGATCGCAGCCAATAGCAGGAGGCTTTCCCTGCGTACACCCAATCAGGGCACGAAGAGGAAGTACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: REIAANSRRLSLRTPNQGTKRKY*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTACTTCCTCTTCGT...GCCCTGATTGGGTGTACGCAGGGAAAGCCTCCTGCTATTGGCTGCGATCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535669.6
CDS-3UTR CAA 90 bp ACGCGGTGCGCCTCCGACCCGTTACCTCTCAGGATGAGGACTTGGAACCAGTCCGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: TRCASDPLPLRMRTWNQSVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...GGACTGGTTCCAAGTCCTCATCCTGAGAGGTAACGGGTCGGAGGCGCACCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS TCA 90 bp GCACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACTT +
Preference number: 5 (lower is better)
Translates to: ARRPSPQRTRSWSCQ*GSRCRSRRSGCRGL
Trigger: AAGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426897.6
ENST00000598095.5
CDS TCA 90 bp AGAGGCACGAAGGCCAAGCAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACGA +
Preference number: 5 (lower is better)
Translates to: RGTKAKQRTRSWSCQ*GSRCRSRRSGCRGR
Trigger: TCGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGCTTGGCCTTCGTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595725.5
CDS TCA 90 bp AGAGGCACGAAGGCCAAGCAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCGAGGACTT +
Preference number: 5 (lower is better)
Translates to: RGTKAKQRTRSWSCQ*GSRCRSRRSGCRGL
Trigger: AAGTCCTCGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGCTTGGCCTTCGTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597602.1
CDS TCA 90 bp AGGAATATCGAGAGCGTCATGAACCCGAGCTATAGAGAAAGGAGATaGGGTCAGAGAAGTCGAAGGGGTGCTGGCGAGACGGGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RNIESVMNPSYRERR*GQRSRRGAGETGVM
Trigger: CATCACCCCCGTCTCGCCAGCACCCCTTCGACTTCTCTGACCTCATCTCCTTTCTCTATAGCTCGGGTTCATGACGCTCTCGATATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS GCA 90 bp CCCATGGTGAAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCAAAGGACACGAAGCTGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: PMVKIPEMARTLDQI*RGTKAKQRTRSWSC
Trigger: ACAAGACCAGCTTCGTGTCCTTTGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595725.5
ENST00000597602.1
CDS-3UTR CAA 90 bp CTAGGATTGTGGAGTCGTTGGTCGCCGACAAGTTGTAGCAGGAGCAGGGCACGCGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: LGLWSRWSPTSCSRSRARVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...GCGTGCCCTGCTCCTGCTACAACTTGTCGGCGACCAACGACTCCACAATCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391859.6
ENST00000595725.5
CDS GCA 90 bp TCTTGTTCTCTCTTTTTCCCGTGTGTTTCCCTTTGGAGCTGTTTATaGCTGTCTCCCTTGGTCCAGGTCGGTGTGTCTTTCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SCSLFFPCVSLWSCL*LSPLVQVGVSFWAR
Trigger: GCGGGCCCAGAAAGACACACCGACCTGGACCAAGGGAGACAGGCATAAACAGCTCCAAAGGGAAACACACGGGAAAAAGAGAGAACAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS-3UTR CAA 90 bp TGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGTCTCAGGATGAGGACTaGGAACCAGTCCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: WGLNKYLQAAGKCPAHVTSQDED*EPVLRV
Trigger: TACCCGCAGGACTGGTTCCAAGTCCTCATCCTGAGA...CGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS TCA 90 bp AGAAGAGGTGCTGACAGTGGGGGAGACAGGGAGAAAGAAAGAGGCTaGGAGAGAAAGAGAGACGGAGAGCTGAGAGAGAAAGGAAGAACC +
Preference number: 5 (lower is better)
Translates to: RRGADSGGDREKERG*ERKRDGELREKGRT
Trigger: GGTTCTTCCTTTCTCTCTCAGCTCTCCGTCTCTCTTTCTCTCTCAGCCTCTTTCTTTCTCCCTGTCTCCCCCACTGTCAGCACCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323906.9
ENST00000426897.6
ENST00000593512.5
ENST00000595725.5
ENST00000598095.5
CDS-3UTR CAA 90 bp GGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCACGAAGAGGAAGTACTaGATGAGGCTGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLQANWGLNKYLQAAGKCTKRKY*MRLRQL
Trigger: GAGCTGCCTCAGCCTCATCAAGTACTTCCTCTTCGT...GCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GCAAGCCCAGGGTCCTTTATTTTGGAGGCTCATCTGTCTTCCCCCTCTGCCTCAGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: ASPGSFILEAHLSSPSASVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...TGAGGCAGAGGGGGAAGACAGATGAGCCTCCAAAATAAAGGACCCTGGGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535669.6
ENST00000598095.5
CDS-3UTR CAA 90 bp TGGGGATTAAACAAATATTTACAGGCAGCAGGGAAGTGCCCAGCGCACGTGACGTCACCTTATCTAGGATaGTGGAGTCGTTGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: WGLNKYLQAAGKCPAHVTSPYLG*WSRWSP
Trigger: CGGCGACCAACGACTCCACAATCCTAGATAAGGTGA...CGTCACGTGCGCTGGGCACTTCCCTGCTGCCTGTAAATATTTGTTTAATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS TCA 90 bp TGGGGGCATCTGACCAGCCACAAGTCCCGACAGATAGGAAGTGCTTaGGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAACCCC +
Preference number: 5 (lower is better)
Translates to: WGHLTSHKSRQIGSA*EMALMIIVVCMHNP
Trigger: GGGGTTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGTCAGATGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS TCA 90 bp CACGAAGGCCAAGCCAGCCACAAGTCCCGACAGATAGGAAGTGCTTaGGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAACCCC +
Preference number: 5 (lower is better)
Translates to: HEGQASHKSRQIGSA*EMALMIIVVCMHNP
Trigger: GGGGTTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGCTTGGCCTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS TCA 90 bp TGTAGACGTGGTCCAGGTTTCTGCACAGGAATATCGAGAGCGTCATaGACCCGAGCTATAGAGAAAGGAGATGAGGTCAGAGAAGTCGAA +
Preference number: 5 (lower is better)
Translates to: CRRGPGFCTGISRAS*TRAIEKGDEVREVE
Trigger: TTCGACTTCTCTGACCTCATCTCCTTTCTCTATAGCTCGGGTTCATGACGCTCTCGATATTCCTGTGCAGAAACCTGGACCACGTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS GCA 90 bp GAGGCACGAAGGCCAAGCCAGCCACAAGTCCCGACAGATAGGAAGTaGTTGAGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAA +
Preference number: 5 (lower is better)
Translates to: EARRPSQPQVPTDRK*LRNGSHDHCCLYAQ
Trigger: TTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGCTTGGCCTTCGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS-3UTR CAA 90 bp GAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGACACGAAGCTGGTCTaGTCAATGAGGATCCAGATG +
Preference number: 5 (lower is better)
Translates to: ECEGGGLQANWGLNKYLQDTKLV*SMRIQM
Trigger: CATCTGGATCCTCATTGACAAGACCAGCTTCGTGTC...CTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS-3UTR CAA 90 bp GAATGTGAAGGCGGAGGGCTCCAGGCGAACTGGGGATTAAACAAATATTTACAGGTTGGTGCCGTACTTTaGGATGGTTTTCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: ECEGGGLQANWGLNKYLQVGAVL*DGFLYD
Trigger: GTCGTAGAGAAAACCATCCAAAAGTACGGCACCAAC...CTGTAAATATTTGTTTAATCCCCAGTTCGCCTGGAGCCCTCCGCCTTCACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000595725.5
CDS GCA 90 bp TTTGTGGGGGCATCTGACCAGCCACAAGTCCCGACAGATAGGAAGTaGTTGAGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAA +
Preference number: 5 (lower is better)
Translates to: FVGASDQPQVPTDRK*LRNGSHDHCCLYAQ
Trigger: TTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGTCAGATGCCCCCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS TCA 90 bp CAGTGTGTTGAACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTaGGCTAGACGGTTTCCTTCCTCCCCTCTCAAAGTTTGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: QCVELSNLIPLLSEP*ARRFPSSPLKVCLF
Trigger: AAACAAACAAACTTTGAGAGGGGAGGAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTCAACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600121.1
CDS TCA 72 bp GGGCCCCCACACAACCCAGGAGGGCGATGCCCATGGTaGAGATTCCTGAGATGGCCAGGACTTTGGACCAGA +
Preference number: 6 (lower is better)
Translates to: GPPHNPGGRCPW*RFLRWPGLWTR
Trigger: TCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCATCGCCCTCCTGGGTTGTGTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000595660.1
ENST00000595725.5
ENST00000596426.5
ENST00000597033.5
ENST00000597602.1
ENST00000597852.5
ENST00000598095.5
ENST00000598134.1
CDS CCA 72 bp GACTCAGGCTCCAAGAAGCCTCCGGTGAGCAGTGGATaGGAGCCTGTAGCCTGCCCACAAAGGACACGAAGC +
Preference number: 6 (lower is better)
Translates to: DSGSKKPPVSSG*EPVACPQRTRS
Trigger: GCTTCGTGTCCTTTGTGGGCAGGCTACAGGCTCCCATCCACTGCTCACCGGAGGCTTCTTGGAGCCTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS CAA 72 bp GGGACACATGCTCTGGTACCTGAGGGGCCTTGGAATTaGTGGGCACCAAGGACTCATGGGGCAGTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: GTHALVPEGPWN*WAPRTHGAVPP
Trigger: GGGAGGGACTGCCCCATGAGTCCTTGGTGCCCACAAATTCCAAGGCCCCTCAGGTACCAGAGCATGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597033.5
CDS CAA 90 bp TGCTCCACTGGGACACATGCTCTGGTACCTGAGGGGCCTTGGAATTaGTGGGCACCAAGGACTCATGGGGCAGTCCCTCCCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: CSTGTHALVPEGPWN*WAPRTHGAVPPRSP
Trigger: TGGAGACCTGGGAGGGACTGCCCCATGAGTCCTTGGTGCCCACAAATTCCAAGGCCCCTCAGGTACCAGAGCATGTGTCCCAGTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597033.5
CDS TCA 72 bp GAGCTCGTCCTTCCCAGGCAACCGAAGGACGCGAAATaGAGGGCAGGGCCATCTAGGGATTTAGGGCCGATC +
Preference number: 6 (lower is better)
Translates to: ELVLPRQPKDAK*RAGPSRDLGPI
Trigger: GATCGGCCCTAAATCCCTAGATGGCCCTGCCCTTCATTTCGCGTCCTTCGGTTGCCTGGGAAGGACGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535669.6
ENST00000597852.5
ENST00000598095.5
CDS CAA 72 bp TCACCACACAGAAGAGGTGCTGAGGGGCCTTGGAATTaGTGGGCACCAAGGACTCATGGGGCAGTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SPHRRGAEGPWN*WAPRTHGAVPP
Trigger: GGGAGGGACTGCCCCATGAGTCCTTGGTGCCCACAAATTCCAAGGCCCCTCAGCACCTCTTCTGTGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS CAA 90 bp AGGAGGGCGATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCTGGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: RRAMPMVKIPEMART*DQICRGTKAKPGRG
Trigger: ACCTCTCCCAGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCATCGCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS CAA 90 bp AGGAGGGCGATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCCACAAAGGAC +
Preference number: 6 (lower is better)
Translates to: RRAMPMVKIPEMART*DQICRGTKAKPTKD
Trigger: GTCCTTTGTGGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCATCGCCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS CAA 90 bp AGGAGGGCGATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCAGCCACAAGT +
Preference number: 6 (lower is better)
Translates to: RRAMPMVKIPEMART*DQICRGTKAKPATS
Trigger: ACTTGTGGCTGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCATCGCCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS CAA 90 bp TGCAGAGGCACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTCTaGTCAATGAGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: CRGTKAKPTKDTKLV*SMRIQMPKQKIRLP
Trigger: CGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGTGCCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS CAA 90 bp AGGAGGGCGATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCAAAGGACACGA +
Preference number: 6 (lower is better)
Translates to: RRAMPMVKIPEMART*DQICRGTKAKQRTR
Trigger: TCGTGTCCTTTGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCATCGCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595725.5
ENST00000597602.1
CDS CAA 90 bp TGGATGGGAGCCTGTAGCCTGCCCACAAAGGACACGAAGCTGGTCTaGTCAATGAGGATCCAGATGCCGAAGCAGAAGATCAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: WMGACSLPTKDTKLV*SMRIQMPKQKIRLP
Trigger: CGGCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCAGGCTACAGGCTCCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS GCA 72 bp AAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCCTGGGAGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: KIPEMARTLDQI*RGTKAKPGRGE
Trigger: CTCACCTCTCCCAGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS GCA 72 bp AAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCCAGCCACAAGTCCC +
Preference number: 6 (lower is better)
Translates to: KIPEMARTLDQI*RGTKAKPATSP
Trigger: GGGACTTGTGGCTGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS CCA 72 bp GTGTTTCCCTTTGGAGCTGTTTATGCCTGTCTCCCTTaGTCCAGGTCGGTGTGTCTTTCTGGGCCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: VFPFGAVYACLP*SRSVCLSGPAE
Trigger: CTCAGCGGGCCCAGAAAGACACACCGACCTGGACCAAGGGAGACAGGCATAAACAGCTCCAAAGGGAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS CCA 72 bp CACAGAAGAGGTGCTGCTCCACTGGGACACATGCTCTaGTACCTGAGGGGCCTTGGAATTTGTGGGCACCAA +
Preference number: 6 (lower is better)
Translates to: HRRGAAPLGHML*YLRGLGICGHQ
Trigger: TTGGTGCCCACAAATTCCAAGGCCCCTCAGGTACCAGAGCATGTGTCCCAGTGGAGCAGCACCTCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597033.5
CDS CAA 72 bp ATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: MPMVKIPEMART*DQICRGTKAKP
Trigger: GGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS TCA 72 bp GCCTGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ACPQRTRSWSCQ*GSRCRSRRSGC
Trigger: GCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS GCA 72 bp AAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCCCACAAAGGACACG +
Preference number: 6 (lower is better)
Translates to: KIPEMARTLDQI*RGTKAKPTKDT
Trigger: CGTGTCCTTTGTGGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS CAA 72 bp ATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: MPMVKIPEMART*DQICRGTKAKP
Trigger: AGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS CAA 72 bp ATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: MPMVKIPEMART*DQICRGTKAKP
Trigger: TGGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS TCA 72 bp CCAAGCCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PSPQRTRSWSCQ*GSRCRSRRSGC
Trigger: GCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS TCA 72 bp CCTCACCCACAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PHPQRTRSWSCQ*GSRCRSRRSGC
Trigger: GCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS GCA 72 bp AAGATTCCTGAGATGGCCAGGACTTTGGACCAGATCTaGAGAGGCACGAAGGCCAAGCAAAGGACACGAAGC +
Preference number: 6 (lower is better)
Translates to: KIPEMARTLDQI*RGTKAKQRTRS
Trigger: GCTTCGTGTCCTTTGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595725.5
ENST00000597602.1
CDS CAA 72 bp ATGCCCATGGTGAAGATTCCTGAGATGGCCAGGACTTaGGACCAGATCTGCAGAGGCACGAAGGCCAAGCAA +
Preference number: 6 (lower is better)
Translates to: MPMVKIPEMART*DQICRGTKAKQ
Trigger: TTGCTTGGCCTTCGTGCCTCTGCAGATCTGGTCCAAAGTCCTGGCCATCTCAGGAATCTTCACCATGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595725.5
ENST00000597602.1
CDS CAA 72 bp GCCTGTAGCCTGCCCACAAAGGACACGAAGCTGGTCTaGTCAATGAGGATCCAGATGCCGAAGCAGAAGATC +
Preference number: 6 (lower is better)
Translates to: ACSLPTKDTKLV*SMRIQMPKQKI
Trigger: GATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCAGGCTACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS TCA 72 bp AAGGCCAAGCAAAGGACACGAAGCTGGTCTTGTCAATaGGGATCCAGATGCCGAAGCAGAAGATCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: KAKQRTRSWSCQ*GSRCRSRRSGC
Trigger: GCAGCCTGATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGCTTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595725.5
ENST00000597602.1
CDS CAA 72 bp ACGAAGGCCAAGCCCACAAAGGACACGAAGCTGGTCTaGTCAATGAGGATCCAGATGCCGAAGCAGAAGATC +
Preference number: 6 (lower is better)
Translates to: TKAKPTKDTKLV*SMRIQMPKQKI
Trigger: GATCTTCTGCTTCGGCATCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGCTTGGCCTTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323906.9
ENST00000391859.6
ENST00000426897.6
ENST00000535669.6
ENST00000593512.5
ENST00000596426.5
ENST00000597033.5
ENST00000598095.5
ENST00000598134.1
CDS CAA 90 bp GTGGGGGCATCTGACCAGCCACAAGTCCCGACAGATAGGAAGTGCTaGAGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAACCC +
Preference number: 6 (lower is better)
Translates to: VGASDQPQVPTDRKC*RNGSHDHCCLYAQP
Trigger: GGGTTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGTCAGATGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS CAA 90 bp GCACGAAGGCCAAGCCAGCCACAAGTCCCGACAGATAGGAAGTGCTaGAGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAACCC +
Preference number: 6 (lower is better)
Translates to: ARRPSQPQVPTDRKC*RNGSHDHCCLYAQP
Trigger: GGGTTGTGCATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGCTTGGCCTTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS CAA 90 bp AGAAATGGCTCTCATGATCATTGTTGTTTGTATGCACAACCCCATTaGCCGGAAGAAGACTCAGGCTCCAAGAAGCCTCCGGTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: RNGSHDHCCLYAQPH*PEEDSGSKKPPVSS
Trigger: ACTGCTCACCGGAGGCTTCTTGGAGCCTGAGTCTTCTTCCGGCAAATGGGGTTGTGCATACAAACAACAATGATCATGAGAGCCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595660.1
ENST00000597852.5
CDS TCA 72 bp GAACTTTCTAATCTCATCCCTCTCCTAAGTGAGCCCTaGGCTAGACGGTTTCCTTCCTCCCCTCTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: ELSNLIPLLSEP*ARRFPSSPLKV
Trigger: AACTTTGAGAGGGGAGGAAGGAAACCGTCTAGCTCAGGGCTCACTTAGGAGAGGGATGAGATTAGAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600121.1
CDS CAA 72 bp TCTCATGATCATTGTTGTTTGTATGCACAACCCCATTaGCCGGAAGAAGACTCAGGCTCCAAGAAGCCTCCG +
Preference number: 6 (lower is better)
Translates to: SHDHCCLYAQPH*PEEDSGSKKPP
Trigger: CGGAGGCTTCTTGGAGCCTGAGTCTTCTTCCGGCAAATGGGGTTGTGCATACAAACAACAATGATCATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595660.1
ENST00000597852.5
CDS CAA 72 bp CCAAGCCAGCCACAAGTCCCGACAGATAGGAAGTGCTaGAGAAATGGCTCTCATGATCATTGTTGTTTGTAT +
Preference number: 6 (lower is better)
Translates to: PSQPQVPTDRKC*RNGSHDHCCLY
Trigger: ATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595660.1
CDS CAA 72 bp CTCTGTCTCTTCTTTCAGGGCGTCTATTTCTTTCTCTaGTTCTCTCTTTTTCCCGTGTGTTTCCCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: LCLFFQGVYFFL*FSLFPVCFPLE
Trigger: CTCCAAAGGGAAACACACGGGAAAAAGAGAGAACAAGAGAAAGAAATAGACGCCCTGAAAGAAGAGACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6
CDS CAA 72 bp TCTGACCAGCCACAAGTCCCGACAGATAGGAAGTGCTaGAGAAATGGCTCTCATGATCATTGTTGTTTGTAT +
Preference number: 6 (lower is better)
Translates to: SDQPQVPTDRKC*RNGSHDHCCLY
Trigger: ATACAAACAACAATGATCATGAGAGCCATTTCTCAAGCACTTCCTATCTGTCGGGACTTGTGGCTGGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS TCA 72 bp TGTTCTGTGACATTGGCTTGGCTCCTTAAACCTCCCTaGGGCATAGGAGATGATATCTATTTCTTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: CSVTLAWLLKPP*GIGDDIYFLGF
Trigger: AAACCCTAAGAAATAGATATCATCTCCTATGCCTCAGGGAGGTTTAAGGAGCCAAGCCAATGTCACAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597852.5
CDS CAA 90 bp CTCATAAGTCTCTGTCTCTTCTTTCAGGGCGTCTATTTCTTTCTCTaGTTCTCTCTTTTTCCCGTGTGTTTCCCTTTGGAGCTGTTTATG +
Preference number: 6 (lower is better)
Translates to: LISLCLFFQGVYFFL*FSLFPVCFPLELFM
Trigger: CATAAACAGCTCCAAAGGGAAACACACGGGAAAAAGAGAGAACAAGAGAAAGAAATAGACGCCCTGAAAGAAGAGACAGAGACTTATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391859.6