RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD34 (Homo sapiens)

Ensembl gene IDs: ENSG00000174059

Ensembl transcript IDs: ENST00000310833.12, ENST00000356522.4, ENST00000367036.7, ENST00000485761.1

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCACGTaGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: RVGRKRCHLQHGGST*SDAERGALSDTAQP
Trigger: AGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp CCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTaGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGT +
Preference number: 1 (lower is better)
Translates to: PQGVGPQEQPLRCVQ*GRVGRKRCHLQHGG
Trigger: ACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp TATCAGCCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTTCCTGAGCCCCTCGGTTCACACTGG +
Preference number: 1 (lower is better)
Translates to: YQPPRVVLLNGRFWR*PGRSRFPEPLGSHW
Trigger: CCAGTGTGAACCGAGGGGCTCAGGAAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CCA 90 bp GGGAAGGGGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACC +
Preference number: 1 (lower is better)
Translates to: GKGVLCECCKAIDCS*ELLQTLAFPRHTFT
Trigger: GGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCCCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp ATTCGGTATCAGCCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCCCGTTTTCCTGAGCCCCTCGGTTCA +
Preference number: 1 (lower is better)
Translates to: IRYQPPRVVLLNGRF*RWPGRSRFPEPLGS
Trigger: TGAACCGAGGGGCTCAGGAAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR TCA 90 bp CTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCCGTTTTCCTG +
Preference number: 1 (lower is better)
Translates to: LAESQFGISHHVLSC*MAVSGGGLAGPVFL
Trigger: CAGGAAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR GCA 90 bp AGTCTGGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: SLAPGSRMCKGQEFT*PSSRCRAPRTASEV
Trigger: CACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp CAACCTTTGTTTGGCCCCAACTGCCTCTGCCACTGTCGACACACTTaGGAGTGTTTCCTGGAGCTCCTCAGCACTCCCTCCCCAACTTCC +
Preference number: 1 (lower is better)
Translates to: QPLFGPNCLCHCRHT*ECFLELLSTPSPTS
Trigger: GGAAGTTGGGGAGGGAGTGCTGAGGAGCTCCAGGAAACACTCCCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAACAAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CCAGCAGGTGGCGCCATTGCTGTACCAGGACGCTCAGGCCCACGGTaGGAAAGTTGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: PAGGAIAVPGRSGPR*ESWIFPESRQILQG
Trigger: GCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGGGCCTGAGCGTCCTGGTACAGCAATGGCGCCACCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp GGCGCCATTGCTGTACCAGGACGCTCAGGCCCACGGTGGGAAAGTTaGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: GAIAVPGRSGPRWES*IFPESRQILQGKLS
Trigger: GGACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGGGCCTGAGCGTCCTGGTACAGCAATGGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp ACCAAAGGATCAGTCCAGACGTCACTTCTCCTGGGAAGCCTTCCATaGTCTTCCACGGCTTCCATGCCCCTCCCACTCAGAGCTTCCTAT +
Preference number: 1 (lower is better)
Translates to: TKGSVQTSLLLGSLP*SSTASMPLPLRASY
Trigger: ATAGGAAGCTCTGAGTGGGAGGGGCATGGAAGCCGTGGAAGACCATGGAAGGCTTCCCAGGAGAAGTGACGTCTGGACTGATCCTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTaGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCC +
Preference number: 1 (lower is better)
Translates to: LGFPPSHVYPKKTRV*LQGAECVKDRSLPA
Trigger: GGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp CTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTaGAACTTAGAGAACAAGGGAGGAGCTGGTGACCAAGTCCACAGT +
Preference number: 1 (lower is better)
Translates to: LCRTLQMVEGAHGAQ*NLENKGGAGDQVHS
Trigger: ACTGTGGACTTGGTCACCAGCTCCTCCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 90 bp TCCCACCTCTCTGCCCTGAAGGTGTCAACAGCTGAATGGGGAACCTaGACCCACCAGTGTGGTATCAAAGGAGGGGTGCTAAACAGAATC +
Preference number: 1 (lower is better)
Translates to: SHLSALKVSTAEWGT*THQCGIKGGVLNRI
Trigger: GATTCTGTTTAGCACCCCTCCTTTGATACCACACTGGTGGGTCCAGGTTCCCCATTCAGCTGTTGACACCTTCAGGGCAGAGAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp GGGTGGTATCAGCAGAGATCTACTGGGAAGCCTGAACTTCTAACCTaGGCCAGCAATAATGAGGTACCCCCTTCACCCCATCCCACCTCT +
Preference number: 1 (lower is better)
Translates to: GWYQQRSTGKPELLT*ASNNEVPPSPHPTS
Trigger: AGAGGTGGGATGGGGTGAAGGGGGTACCTCATTATTGCTGGCCCAGGTTAGAAGTTCAGGCTTCCCAGTAGATCTCTGCTGATACCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp GGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGAGGAGCTGGTaGCCAAGTCCACAGTGTCTTGGAGGAGAGATGAGGGAAGTGGTT +
Preference number: 1 (lower is better)
Translates to: GTWSSVELREQGRSW*PSPQCLGGEMREVV
Trigger: AACCACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTTGGTCACCAGCTCCTCCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 90 bp TTTGCTCCAACCCTCAAGGCAGCCATCGCCTTTGAGGGAAGACTCTaGACCTCATCATTTCGCCTCCCCTCTGTCCTAGGGAAGAACCTA +
Preference number: 1 (lower is better)
Translates to: FAPTLKAAIAFEGRL*TSSFRLPSVLGKNL
Trigger: TAGGTTCTTCCCTAGGACAGAGGGGAGGCGAAATGATGAGGTTCAGAGTCTTCCCTCAAAGGCGATGGCTGCCTTGAGGGTTGGAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp CCCATATTTCCTAGGAATCTGAACCCTGAACCCACCCCTCCTACTTaGTGTCCTAGCTGGGACAGACCCTCACTGGATTACTCTCAAGGC +
Preference number: 1 (lower is better)
Translates to: PIFPRNLNPEPTPPT*CPSWDRPSLDYSQG
Trigger: GCCTTGAGAGTAATCCAGTGAGGGTCTGTCCCAGCTAGGACATCAAGTAGGAGGGGTGGGTTCAGGGTTCAGATTCCTAGGAAATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp CAACATACCACCCTCCATTTGGAAGCTCCCTGGTACATTCGGGTCTaGCTTTCTACCACTGGAAATGGATGTTTCCTCTCCCCATGGAGG +
Preference number: 1 (lower is better)
Translates to: QHTTLHLEAPWYIRV*LSTTGNGCFLSPWR
Trigger: CCTCCATGGGGAGAGGAAACATCCATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp GACACAACCTCATGGCCATCTTGCCCCCTGCCATCTGAGGCTTTCTaGACTTGGCAGCTTTTCATCATAGGGCTTTGCACTTGTCCTTTC +
Preference number: 1 (lower is better)
Translates to: DTTSWPSCPLPSEAF*TWQLFIIGLCTCPF
Trigger: GAAAGGACAAGTGCAAAGCCCTATGATGAAAAGCTGCCAAGTGCAGAAAGCCTCAGATGGCAGGGGGCAAGATGGCCATGAGGTTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp GGAAGCTCCCTGGTACATTCGGGTCTGCCTTTCTACCACTGGAAATaGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGG +
Preference number: 1 (lower is better)
Translates to: GSSLVHSGLPFYHWK*MFPLPMEENSWQTW
Trigger: CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp GAAGTGAAGTCCCAAACCTATCTTCACACTGCCACACTGGCTTCATaGCATCCAACTGGAGTAACACGGAGGACTCGGCAGAAGAGTAGG +
Preference number: 1 (lower is better)
Translates to: EVKSQTYLHTATLAS*HPTGVTRRTRQKSR
Trigger: CCTACTCTTCTGCCGAGTCCTCCGTGTTACTCCAGTTGGATGTCATGAAGCCAGTGTGGCAGTGTGAAGATAGGTTTGGGACTTCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CCATTTGGAAGCTCCCTGGTACATTCGGGTCTGCCTTTCTACCACTaGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAG +
Preference number: 1 (lower is better)
Translates to: PFGSSLVHSGLPFYH*KWMFPLPMEENSWQ
Trigger: CTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp AGTCAACAGTGTAATACCCTACAGCTAATTTTCCTGGGCTCACTGTaGGCGCCGAAGAAGCCGAACCTCATGGCCTCCTGTGATCTTTGT +
Preference number: 1 (lower is better)
Translates to: SQQCNTLQLIFLGSL*APKKPNLMASCDLC
Trigger: ACAAAGATCACAGGAGGCCATGAGGTTCGGCTTCTTCGGCGCCCACAGTGAGCCCAGGAAAATTAGCTGTAGGGTATTACACTGTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp CCAAAGCATACATACACATTCCAGCAAACTCAGGGTGAGATGCATTaGAGGTTGCTAGGCCTGAAGCTGGAGGTGCATCCAAGTTGCCTT +
Preference number: 1 (lower is better)
Translates to: PKHTYTFQQTQGEMH*RLLGLKLEVHPSCL
Trigger: AAGGCAACTTGGATGCACCTCCAGCTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTGAGTTTGCTGGAATGTGTATGTATGCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp TCTCTCGGGAACACCCATATCTCTCCTTTTCTCCTCTTTAACTCCTaGTTGACCAAAGGATCAGTCCAGACGTCACTTCTCCTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: SLGNTHISPFLLFNS*LTKGSVQTSLLLGS
Trigger: GCTTCCCAGGAGAAGTGACGTCTGGACTGATCCTTTGGTCAAGCAGGAGTTAAAGAGGAGAAAAGGAGAGATATGGGTGTTCCCGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CAGCTCCTAAGAACCCAACATACCACCCTCCATTTGGAAGCTCCCTaGTACATTCGGGTCTGCCTTTCTACCACTGGAAATGGATGTTTC +
Preference number: 1 (lower is better)
Translates to: QLLRTQHTTLHLEAP*YIRVCLSTTGNGCF
Trigger: GAAACATCCATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTATGTTGGGTTCTTAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp CTGGCCAGGCCTAGGATAGCTTATGTTGATGAAATGCTCCAGAAGTaGAGTCCCAAACCTATCTTCACACTGCCACACTGGCTTCATGAC +
Preference number: 1 (lower is better)
Translates to: LARPRIAYVDEMLQK*SPKPIFTLPHWLHD
Trigger: GTCATGAAGCCAGTGTGGCAGTGTGAAGATAGGTTTGGGACTTCACTTCTGGAGCATTTCATCAACATAAGCTATCCTAGGCCTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp TTGTTCTGTCATCTGTCCCTCCCACATCCACCCAATGTAAAGACTTaGCAGAAGGGACTATGTCTTATCCCAGGTGCCTGGCATAGTACC +
Preference number: 1 (lower is better)
Translates to: LFCHLSLPHPPNVKT*QKGLCLIPGAWHST
Trigger: GGTACTATGCCAGGCACCTGGGATAAGACATAGTCCCTTCTGTCAAGTCTTTACATTGGGTGGATGTGGGAGGGACAGATGACAGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp AGCTTCATGAGTGTTTGCTGTATCCCCAGTCTCAAGAACAGTGTCTaGCACATAACAGATGTTCTGGCACATTTCGCGCAGTGTCTGGCA +
Preference number: 1 (lower is better)
Translates to: SFMSVCCIPSLKNSV*HITDVLAHFAQCLA
Trigger: TGCCAGACACTGCGCGAAATGTGCCAGAACATCTGTTATGTGCCAGACACTGTTCTTGAGACTGGGGATACAGCAAACACTCATGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp TCAAACATAGGGAGACTCCGATATGTAGAGAGAAGAAGGCAGAATTaGGAGGGACTTTTGGACTCAAGGAATGACATGGCACCAGGGTGG +
Preference number: 1 (lower is better)
Translates to: SNIGRLRYVERRRQN*EGLLDSRNDMAPGW
Trigger: CCACCCTGGTGCCATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAATTCTGCCTTCTTCTCTCTACATATCGGAGTCTCCCTATGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp AAGGCAAGATGTGCAACTAGATGCAAGTGGGCTGGACTTCCCTACTaGTTACCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCA +
Preference number: 1 (lower is better)
Translates to: KARCATRCKWAGLPY*LPSSFAHHPLLQPS
Trigger: TGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAAGTCCAGCCCACTTGCATCTAGTTGCACATCTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp ACATCACTGCACAGTCTAGCTAGGTCTAATGGAGGGTGTCACTCTTaGATGCAGACACACCCAGCTAAGACAGAGTCACATAACAGATGT +
Preference number: 1 (lower is better)
Translates to: TSLHSLARSNGGCHS*MQTHPAKTESHNRC
Trigger: ACATCTGTTATGTGACTCTGTCTTAGCTGGGTGTGTCTGCATGCAAGAGTGACACCCTCCATTAGACCTAGCTAGACTGTGCAGTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp TTGATGAAATGCTCCAGAAGTGAAGTCCCAAACCTATCTTCACACTaGCACACTGGCTTCATGACATCCAACTGGAGTAACACGGAGGAC +
Preference number: 1 (lower is better)
Translates to: LMKCSRSEVPNLSSH*HTGFMTSNWSNTED
Trigger: GTCCTCCGTGTTACTCCAGTTGGATGTCATGAAGCCAGTGTGGCAGTGTGAAGATAGGTTTGGGACTTCACTTCTGGAGCATTTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 90 bp GCCTTAAAAGAATCACTCACATTTCTGGAACAATCACCCTCACTTTaGTCCTGGGACAAGGCTTCTTCCTCTCTCGGGAACACCCATATC +
Preference number: 1 (lower is better)
Translates to: ALKESLTFLEQSPSL*SWDKASSSLGNTHI
Trigger: GATATGGGTGTTCCCGAGAGAGGAAGAAGCCTTGTCCCAGGAGCAAAGTGAGGGTGATTGTTCCAGAAATGTGAGTGATTCTTTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp AGGTCTGGCTTTATGGAGATAAGAATGGAAGAATCAACCTTTGTTTaGCCCCAACTGCCTCTGCCACTGTCGACACACTTGGGAGTGTTT +
Preference number: 1 (lower is better)
Translates to: RSGFMEIRMEESTFV*PQLPLPLSTHLGVF
Trigger: AAACACTCCCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAACAAAGGTTGATTCTTCCATTCTTATCTCCATAAAGCCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CTTGGAGGAGAGATGAGGGAAGTGGTTCAAGGCAACACGTTTTTCTaGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTTGGT +
Preference number: 1 (lower is better)
Translates to: LGGEMREVVQGNTFF*LYHYKRAGAKGYFG
Trigger: ACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCTCATCTCTCCTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 90 bp TCTCTCCCAGCTTGGCATACAACCTGCTTCTCCACTTCATTCAAGTaGAGCTGTGCTCTCCACTGTTATTTTTCTAAAAGTAACCACCAT +
Preference number: 1 (lower is better)
Translates to: SLPAWHTTCFSTSFK*SCALHCYFSKSNHH
Trigger: ATGGTGGTTACTTTTAGAAAAATAACAGTGGAGAGCACAGCTTCACTTGAATGAAGTGGAGAAGCAGGTTGTATGCCAAGCTGGGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp TTTAGCTTTAAACACCCTACACAAACTGTGACACCCGGATCTTTCTaGTACTCGGCTTCCCTTAACACATTCTACTTCTCTGTCATACCA +
Preference number: 1 (lower is better)
Translates to: FSFKHPTQTVTPGSF*YSASLNTFYFSVIP
Trigger: TGGTATGACAGAGAAGTAGAATGTGTTAAGGGAAGCCGAGTACCAGAAAGATCCGGGTGTCACAGTTTGTGTAGGGTGTTTAAAGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp AATAGACTGAGCAAGTCCTGTTACCTCTACTTTGAAACCACTTTTTaGATTCTGCTTGATCTCATCACTGCCAATATGATCACCTGCTCC +
Preference number: 1 (lower is better)
Translates to: NRLSKSCYLYFETTF*ILLDLITANMITCS
Trigger: GGAGCAGGTGATCATATTGGCAGTGATGAGATCAAGCAGAATTCAAAAAGTGGTTTCAAAGTAGAGGTAACAGGACTTGCTCAGTCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp AAAATTAAACTCTGTGGTTTAGCTTTAAACACCCTACACAAACTGTaGCACCCGGATCTTTCTGGTACTCGGCTTCCCTTAACACATTCT +
Preference number: 1 (lower is better)
Translates to: KIKLCGLALNTLHKL*HPDLSGTRLPLTHS
Trigger: AGAATGTGTTAAGGGAAGCCGAGTACCAGAAAGATCCGGGTGTCACAGTTTGTGTAGGGTGTTTAAAGCTAAACCACAGAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 90 bp AGAGGAAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTaGTCTATTTATCTGGACTTAGATGGTATTCCCATTTATCCATTC +
Preference number: 1 (lower is better)
Translates to: RGSVGLIYLEGMRWK*SIYLDLDGIPIYPF
Trigger: GAATGGATAAATGGGAATACCATCTAAGTCCAGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTTCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 90 bp CCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTGGACTTAGATaGTATTCCCATTTATCCATTCAGATGAAAATCTGGCTGAAGATA +
Preference number: 1 (lower is better)
Translates to: PRRDEMEVIYLSGLR*YSHLSIQMKIWLKI
Trigger: TATCTTCAGCCAGATTTTCATCTGAATGGATAAATGGGAATACCATCTAAGTCCAGATAAATAGATCACTTCCATCTCATCCCTTCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCCCCTCGGTTCACACTaGCCTTTCCCTGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSPLGSH*PFPEPQ
Trigger: CTGAGGCTCAGGGAAAGGCCAGTGTGAACCGAGGGG...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR TCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCCCGGTCCCGTTTTCCTaGGCCCCTCGGTTCACACTG +
Preference number: 2 (lower is better)
Translates to: CHLQHGGSTWSDAERGALPVPFS*APRFTL
Trigger: CAGTGTGAACCGAGGGGCTCAGGAAAACGGGACCGG...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR GCA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCGGATCGGAGGGAGGGTaGAGCTGCATGTGCAGACTC +
Preference number: 2 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSGSEGG*SCMCRL
Trigger: GAGTCTGCACATGCAGCTGCACCCTCCCTCCGATCC...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CAA 90 bp GTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTG +
Preference number: 2 (lower is better)
Translates to: VVRCREGCSLGHCPA*PHLAESQFGISHHV
Trigger: CACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR GCA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCGAGGGAGGGTGCAGCTaGATGTGCAGACTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSEGGCS*MCRLLS
Trigger: AGAAAGGAGTCTGCACATGCAGCTGCACCCTCCCTC...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR TCA 90 bp TTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCACACTGGCCTTTCCCTaGGCCTCAGGGGAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LPHLAESQFGISHHVLSCTLAFP*ASGEVP
Trigger: TGGGACCTCCCCTGAGGCTCAGGGAAAGGCCAGTGT...GCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR GCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCAAGATGCAGAGAGGGGTaGTCTCTCGGACACTGCCCA +
Preference number: 2 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVARCREG*SLGHCP
Trigger: TGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCT...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 2 (lower is better)
Translates to: CHLQHGGSTWSDAERGALGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSGRFWR*PGRSRF
Trigger: AAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCC...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CAA 90 bp CCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTaGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: PPSRVTIRYQPPRVV*LNGRFWRWPGRSRF
Trigger: AAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR TCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCGAAGGGGGTCCTGTGTaGGTGCTGCAAGGCCATCGA +
Preference number: 2 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSEGGPV*VLQGHR
Trigger: TCGATGGCCTTGCAGCACTCACACAGGACCCCCTTC...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR TCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCCATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAG +
Preference number: 2 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGHLLGD*GNSSTQ
Trigger: CTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATG...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGAGGGCTGTGAGACACTaGATGGGAGAGGGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWRAVRH*MGEGPK
Trigger: TTTGGGCCCCTCTCCCATCCAGTGTCTCACAGCCCT...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR CCA 90 bp CCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTG +
Preference number: 2 (lower is better)
Translates to: PSLAPPSRVTIRYQPPRVAIDCS*ELLQTL
Trigger: CAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGC...AACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR CCA 90 bp CCGAACCTCATGGCCTCCTGTGATCTTTGTCCTGGGGCTCCTCCAGGACCTGCTCATTTGGAAGCTCCCTaGTACATTCGGGTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: PNLMASCDLCPGAPPGPAHLEAP*YIRVCL
Trigger: AAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATG...AGCAGGTCCTGGAGGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCCCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CAA 90 bp TGGCGCCATTGCTGTACCAGGACGCTCAGGCCCACGGTGGGAAAGTaGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: WRHCCTRTLRPTVGK*DFSRKQANSSGQAV
Trigger: GACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGGGCCTGAGCGTCCTGGTACAGCAATGGCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp GGGGGTGGAGGAGTGCTGAAGGGAAAGGTCTGGCTTTATGGAGATAAGAATGGACATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAG +
Preference number: 2 (lower is better)
Translates to: GGGGVLKGKVWLYGDKNGHLLGD*GNSSTQ
Trigger: CTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATG...TCCATTCTTATCTCCATAAAGCCAGACCTTTCCCTTCAGCACTCCTCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 2 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp CCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAAGGCAGCCATCGCCTGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 2 (lower is better)
Translates to: PSSFAHHPLLQPSRQPSPGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...AGGCGATGGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGAAGAAGACCAGAGTCTaGCTCCAGGGAGCCGAATGT +
Preference number: 2 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRKKTRV*LQGAEC
Trigger: ACATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTT...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGTTGTCTTGCTGAATaGCCGTTTCTGGAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTCCLAE*PFLEVA
Trigger: GGCCACCTCCAGAAACGGCCATTCAGCAAGACAACA...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR TCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGCCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 2 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp GTCGACACACTTGGGAGTGTTTCCTGGAGCTCCTCAGCACTCCCTCCCCAACTTGTTTGTCCTAAAACTTaGGAGGCCTGTTCTAGGCTC +
Preference number: 2 (lower is better)
Translates to: VDTLGSVSWSSSALPPQLVCPKT*EACSRL
Trigger: GAGCCTAGAACAGGCCTCCCAAGTTTTAGGACAAAC...AAGTTGGGGAGGGAGTGCTGAGGAGCTCCAGGAAACACTCCCAAGTGTGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCGGGAGGAGGAAGCCATaGAGATCAGAGGATAAGGCT +
Preference number: 2 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPGRRKP*RSEDKA
Trigger: AGCCTTATCCTCTGATCTCCATGGCTTCCTCCTCCC...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR TCA 90 bp CTTCTACTTTCTTATCCCTCAACCTCTATTCTCTACTCAGCAGCCAGCATGATCAACCAGCCCCCTCCCTaGGTTGGCTGCCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: LLLSYPSTSILYSAASMINQPPP*VGCQVS
Trigger: AGAGACCTGGCAGCCAACTCAGGGAGGGGGCTGGTT...GATCATGCTGGCTGCTGAGTAGAGAATAGAGGTTGAGGGATAAGAAAGTAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGAGCTTCTCCAGACCTTaGCTTTCCCCCGTCACACGT +
Preference number: 2 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKSFSRP*LSPVTR
Trigger: ACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCT...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGAGCTCATCTTTCCCCTaGGGGTTCCTGTATTGCGGC +
Preference number: 2 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWSSSFP*GFLYCG
Trigger: GCCGCAATACAGGAACCCCCAGGGGAAAGATGAGCT...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp TTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGAAGTCCACAGTGTCTTaGAGGAGAGATGAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: LAFPRHTFTQRRPESGSRKSTVS*RRDEGS
Trigger: ACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTT...CCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATTGGGCTATGACCATATaGGGGTGCAGAGCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDWAMTI*GCRARK
Trigger: CTTCCTTGCTCTGCACCCCCATATGGTCATAGCCCA...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CAA 90 bp CTAGATGCAAGTGGGCTGGACTTCCCTACTGATTACCATCGTCTTTaGCTCATCATCCTTTGCTCCAACCCTCAAGGCAGCCATCGCCTT +
Preference number: 2 (lower is better)
Translates to: LDASGLDFPTDYHRL*LIILCSNPQGSHRL
Trigger: AAGGCGATGGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAAGTCCAGCCCACTTGCATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp AGTTGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTCCAGCTGTCCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SWIFPESRQILQGKLSSCPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...ACAGCTGGACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCATTTCCAACCGTCATTaGAACCAGGATCCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPISNRH*NQDPCS
Trigger: TGAGCAGGGATCCTGGTTTCAATGACGGTTGGAAAT...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR TCA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAACACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: DSANGRGGTWSSVELREQHVLSC*MAVSGG
Trigger: ACCTCCAGAAACGGCCATTCAGCAAGACAACACGTG...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR-3UTR GCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 2 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTG +
Preference number: 2 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRAIDCS*ELLQTL
Trigger: CAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGC...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGGGTAGAGGGGGCACATaGAGCTCAGTGGAACTTAGA +
Preference number: 2 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKGRGGT*SSVELR
Trigger: TCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACC...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAACTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCC +
Preference number: 2 (lower is better)
Translates to: WFKATRFSGYIITREQVQLNGRF*RWPGRS
Trigger: GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAG...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CAA 90 bp CATACATACACATTCCAGCAAACTCAGGGTGAGATGCATTGCAGGTaGCTAGGCCTGAAGCTGGAGGTGCATCCAAGTTGCCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: HTYTFQQTQGEMHCR*LGLKLEVHPSCLFL
Trigger: GAGGAAAAGGCAACTTGGATGCACCTCCAGCTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTGAGTTTGCTGGAATGTGTATGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 90 bp GCTTTGCACTTGTCCTTTCCCCTGTGTGGGATAATCTCTCCCAGCTaGGCATACAACCTGCTTCTCCACTTCATTCAAGTGAAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: ALHLSFPLCGIISPS*AYNLLLHFIQVKLC
Trigger: GCACAGCTTCACTTGAATGAAGTGGAGAAGCAGGTTGTATGCCAAGCTGGGAGAGATTATCCCACACAGGGGAAAGGACAAGTGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAGAAGGGGGTCCTGTGTaGGTGCTGCAAGGCCATCGA +
Preference number: 2 (lower is better)
Translates to: WFKATRFSGYIITREQVQEGGPV*VLQGHR
Trigger: TCGATGGCCTTGCAGCACTCACACAGGACCCCCTTC...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR TCA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGTGGTCCTGCCTACTTTaGTCCAGAGGGAGAAAAAGG +
Preference number: 2 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKWSCLL*SRGRKR
Trigger: CCTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCA...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR TCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGATCTACTGGGAAGCCTaGACTTCTAACCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: NRLNTEADKRISIRGLGAIYWEA*TSNLGQ
Trigger: CTGGCCCAGGTTAGAAGTTCAGGCTTCCCAGTAGAT...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTAAGTCCACAGTGTCTTaGAGGAGAGATGAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: GPRETRTELFVLKLGRPVKSTVS*RRDEGS
Trigger: ACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTT...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGCAGAAAAGCATCTGTTaGGGGACTGAGGCAACAGCT +
Preference number: 2 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWQKSIC*GTEATA
Trigger: AGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTG...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGAGATGCAGAGAGGGGTaGTCTCTCGGACACTGCCCA +
Preference number: 2 (lower is better)
Translates to: SRQHVFLAISLQESRCKRRCREG*SLGHCP
Trigger: TGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCT...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp AGTTATATGAGCTTTGTGTACAAGAGAAATTGGACTAGAGGGTGGGGCAGCCAGCAGGGTGAGATGCATTaGAGGTTGCTAGGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: SYMSFVYKRNWTRGWGSQQGEMH*RLLGLK
Trigger: CTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTG...CTGGCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACACAAAGCTCATATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 90 bp AAGGTCTGGCTTTATGGAGATAAGAATGGAAGAATCAACCTTTGTTaGGCCCCAACTGCCTCTGCCACTGTCGACACACTTGGGAGTGTT +
Preference number: 2 (lower is better)
Translates to: KVWLYGDKNGRINLC*APTASATVDTLGSV
Trigger: AACACTCCCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAACAAAGGTTGATTCTTCCATTCTTATCTCCATAAAGCCAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAGCTTCTCCAGACCTTaGCTTTCCCCCGTCACACGT +
Preference number: 2 (lower is better)
Translates to: WFKATRFSGYIITREQVQSFSRP*LSPVTR
Trigger: ACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCT...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAGCTCATCTTTCCCCTaGGGGTTCCTGTATTGCGGC +
Preference number: 2 (lower is better)
Translates to: WFKATRFSGYIITREQVQSSSFP*GFLYCG
Trigger: GCCGCAATACAGGAACCCCCAGGGGAAAGATGAGCT...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGATACCACCCTCCATTTaGAAGCTCCCTGGTACATTC +
Preference number: 2 (lower is better)
Translates to: NRLNTEADKRISIRGLGAIPPSI*KLPGTF
Trigger: GAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTAT...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 90 bp AGCCTTAAAAGAATCACTCACATTTCTGGAACAATCACCCTCACTTaGCTCCTGGGACAAGGCTTCTTCCTCTCTCGGGAACACCCATAT +
Preference number: 2 (lower is better)
Translates to: SLKRITHISGTITLT*LLGQGFFLSREHPY
Trigger: ATATGGGTGTTCCCGAGAGAGGAAGAAGCCTTGTCCCAGGAGCAAAGTGAGGGTGATTGTTCCAGAAATGTGAGTGATTCTTTTAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCTTACAAGAGAGCAGGTaGAAAAGGTTACTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPLQESR*KRLLWF
Trigger: AAACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAA...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CAA 90 bp CCCACTCAGAGCTTCCTATACCATAGCACTTACACTCAATGCATATaGTTCTGTCATCTGTCCCTCCCACATCCACCCAATGTAAAGACT +
Preference number: 2 (lower is better)
Translates to: PTQSFLYHSTYTQCI*FCHLSLPHPPNVKT
Trigger: AGTCTTTACATTGGGTGGATGTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATAGGAAGCTCTGAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: QHVFLAISLQESRCKRLLGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 2 (lower is better)
Translates to: QHVFLAISLQESRCKRLLGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR GCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACATTACAAGAGAGCAGGTaGAAAAGGTTACTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTLQESR*KRLLWF
Trigger: AAACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAA...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CCA 90 bp AGGATCCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGGGCAACACGTTTTTCTaGCTATATCATTACAAGAGA +
Preference number: 2 (lower is better)
Translates to: RIPAQPLWKEINSKQGPGGNTFF*LYHYKR
Trigger: TCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCC...CCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CAA 90 bp TATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATaGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: YTVECFRGYPSYHNR*NTEADKRISIRGLG
Trigger: GCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp AAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTGGAGGGTGTCACTCTTaGATGCAGACACACCCAGCT +
Preference number: 2 (lower is better)
Translates to: KCGINLPRRDEMEVIYLSGGCHS*MQTHPA
Trigger: AGCTGGGTGTGTCTGCATGCAAGAGTGACACCCTCC...AGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR GCA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACATTACCATCGTCTTTTaGTCATCATCCTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDITIVF*SSSFAP
Trigger: TGGAGCAAAGGATGATGAGCAAAAGACGATGGTAAT...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp TATACCATAGCACTTACACTCAATGCATATTGTTCTGTCATCTGTCCCTCCCACCCACGGTGGGAAAGTTaGATTTTTCCAGAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: YTIALTLNAYCSVICPSHPRWES*IFPESR
Trigger: CCTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGG...GTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp AGAGAAGCAGCATCCTGTTGCACAAAATCGATGACCTATTACTGGTTTTGTGTGTTCATGACATCCAACTaGAGTAACACGGAGGACTCG +
Preference number: 2 (lower is better)
Translates to: REAASCCTKSMTYYWFCVFMTSN*SNTEDS
Trigger: CGAGTCCTCCGTGTTACTCCAGTTGGATGTCATGAA...CACACAAAACCAGTAATAGGTCATCGATTTTGTGCAACAGGATGCTGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp AGAGAAGCAGCATCCTGTTGCACAAAATCGATGACCTATTACTGGTTTTGTGTGCCTGCTCAACCCCTCTaGAAAGAAATCAACAGCAAA +
Preference number: 2 (lower is better)
Translates to: REAASCCTKSMTYYWFCVPAQPL*KEINSK
Trigger: TTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG...CACACAAAACCAGTAATAGGTCATCGATTTTGTGCAACAGGATGCTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGAAGAAGCCGAACCTCATaGCCTCCTGTGATCTTTGTC +
Preference number: 2 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRRSRTS*PPVIFV
Trigger: GACAAAGATCACAGGAGGCCATGAGGTTCGGCTTCT...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR TCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGATTTGAGGGAAGACTCTaGACCTCATCATTTCGCCTC +
Preference number: 2 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRFEGRL*TSSFRL
Trigger: GAGGCGAAATGATGAGGTTCAGAGTCTTCCCTCAAA...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 90 bp GCTTCCCTTAACACATTCTACTTCTCTGTCATACCAGAAAACACATaGTCCTTTGACAGTACCTTATCTTTCCCCATCACTACATATTGT +
Preference number: 2 (lower is better)
Translates to: ASLNTFYFSVIPENT*SFDSTLSFPITTYC
Trigger: ACAATATGTAGTGATGGGGAAAGATAAGGTACTGTCAAAGGACAATGTGTTTTCTGGTATGACAGAGAAGTAGAATGTGTTAAGGGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 90 bp TTAACACATTCTACTTCTCTGTCATACCAGAAAACACATTGTCCTTaGACAGTACCTTATCTTTCCCCATCACTACATATTGTATGTACT +
Preference number: 2 (lower is better)
Translates to: LTHSTSLSYQKTHCP*TVPYLSPSLHIVCT
Trigger: AGTACATACAATATGTAGTGATGGGGAAAGATAAGGTACTGTCAAAGGACAATGTGTTTTCTGGTATGACAGAGAAGTAGAATGTGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp GTGGGCGCCGAAGAAGCCGAACCTCATGGCCTCCTGTaGTCTTTGTCCTGGGGCTCCTCCAGGACCTGCTTG +
Preference number: 3 (lower is better)
Translates to: VGAEEAEPHGLL*SLSWGSSRTCL
Trigger: CAAGCAGGTCCTGGAGGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGGTTCGGCTTCTTCGGCGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp TGGGCTCACTGTGGGCGCCGAAGAAGCCGAACCTCATaGCCTCCTGTGATCTTTGTCCTGGGGCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: WAHCGRRRSRTS*PPVIFVLGLLQ
Trigger: CTGGAGGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGGTTCGGCTTCTTCGGCGCCCACAGTGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp CCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTTCCTGAGCCCCTCGGT +
Preference number: 3 (lower is better)
Translates to: PRVVLLNGRFWR*PGRSRFPEPLG
Trigger: ACCGAGGGGCTCAGGAAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CCA 72 bp CAGCCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCCCGTTTTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: QPPRVVLLNGRF*RWPGRSRFPEP
Trigger: GGGCTCAGGAAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR GCA 72 bp GTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTAGCCGAGTCACAATTC +
Preference number: 3 (lower is better)
Translates to: VVRCREGCSLGH*PALPHLAESQF
Trigger: GAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR TCA 72 bp AGGGAGGCAGAGACAGAAAAGCATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAGGAGTCGGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: REAETEKHLLGD*GNSSTQESAGG
Trigger: CCCTCCTGCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTCTCTGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR GCA 72 bp CCACCCCCACTCACTGACACAACCTCATGGCCATCTTaGCCCCTGCCATCTGAGGCTTTCTGCACTTGGCAG +
Preference number: 3 (lower is better)
Translates to: PPPLTDTTSWPS*PLPSEAFCTWQ
Trigger: CTGCCAAGTGCAGAAAGCCTCAGATGGCAGGGGGCAAGATGGCCATGAGGTTGTGTCAGTGAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp TTTGGCCCCAACTGCCTCTGCCACTGTCGACACACTTaGGAGTGTTTCCTGGAGCTCCTCAGCACTCCCTCC +
Preference number: 3 (lower is better)
Translates to: FGPNCLCHCRHT*ECFLELLSTPS
Trigger: GGAGGGAGTGCTGAGGAGCTCCAGGAAACACTCCCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATTGCAGTGGGGAAGGGTaGGGCGTAAGAGATGTCACC +
Preference number: 3 (lower is better)
Translates to: PRHTFTQRRPESGSREPNCSGEG*GVRDVT
Trigger: GGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 72 bp TCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCC +
Preference number: 3 (lower is better)
Translates to: SQFGISHHVLSC*MAVSGGGLAGP
Trigger: GGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAATTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR GCA 72 bp CCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCC +
Preference number: 3 (lower is better)
Translates to: PGSRMCKGQEFT*PSSRCRAPRTA
Trigger: GGCTGTTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 72 bp GTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCAC +
Preference number: 3 (lower is better)
Translates to: VLCECCKAIDCS*ELLQTLAFPRH
Trigger: GTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 72 bp TCAGTCCAGACGTCACTTCTCCTGGGAAGCCTTCCATaGTCTTCCACGGCTTCCATGCCCCTCCCACTCAGA +
Preference number: 3 (lower is better)
Translates to: SVQTSLLLGSLP*SSTASMPLPLR
Trigger: TCTGAGTGGGAGGGGCATGGAAGCCGTGGAAGACCATGGAAGGCTTCCCAGGAGAAGTGACGTCTGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp AATTCGGTATCAGCCACCACGTGTTGTCTTGCTGAATaGCCGTTTCTGGAGGTGGCCTGGCCGGTCCCGTTT +
Preference number: 3 (lower is better)
Translates to: NSVSATTCCLAE*PFLEVAWPVPF
Trigger: AAACGGGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR TCA 72 bp TGTCTTAATCTTGAGGGTGGAAACCAGCCCCCTCCCTaGGTTGGCTGCCAGGTCTCTAGAACAACAGTCCCC +
Preference number: 3 (lower is better)
Translates to: CLNLEGGNQPPP*VGCQVSRTTVP
Trigger: GGGGACTGTTGTTCTAGAGACCTGGCAGCCAACTCAGGGAGGGGGCTGGTTTCCACCCTCAAGATTAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp CCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTaGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGT +
Preference number: 3 (lower is better)
Translates to: PPSHVYPKKTRV*LQGAECVKDRS
Trigger: ACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CCA 72 bp TCTGCCCTGAAGGTGTCAACAGCTGAATGGGGAACCTaGACCCACCAGTGTGGTATCAAAGGAGGGGTGCTA +
Preference number: 3 (lower is better)
Translates to: SALKVSTAEWGT*THQCGIKGGVL
Trigger: TAGCACCCCTCCTTTGATACCACACTGGTGGGTCCAGGTTCCCCATTCAGCTGTTGACACCTTCAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTTGCAGTGGGGAAGGGTaGGGCGTAAGAGATGTCACC +
Preference number: 3 (lower is better)
Translates to: GPRETRTELFVLKLGRPVCSGEG*GVRDVT
Trigger: GGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 72 bp CCTAGGAATCTGAACCCTGAACCCACCCCTCCTACTTaGTGTCCTAGCTGGGACAGACCCTCACTGGATTAC +
Preference number: 3 (lower is better)
Translates to: PRNLNPEPTPPT*CPSWDRPSLDY
Trigger: GTAATCCAGTGAGGGTCTGTCCCAGCTAGGACATCAAGTAGGAGGGGTGGGTTCAGGGTTCAGATTCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp TGTAATACCCTACAGCTAATTTTCCTGGGCTCACTGTaGGCGCCGAAGAAGCCGAACCTCATGGCCTCCTGT +
Preference number: 3 (lower is better)
Translates to: CNTLQLIFLGSL*APKKPNLMASC
Trigger: ACAGGAGGCCATGAGGTTCGGCTTCTTCGGCGCCCACAGTGAGCCCAGGAAAATTAGCTGTAGGGTATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp AGGATCCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGCTGCAAGGCCATCGATaGTTCCTGGGAGCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: RIPAQPLWKEINSKQGPGLQGHR*FLGASP
Trigger: TGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAG...CCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CAA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGCTGCAAGGCCATCGATaGTTCCTGGGAGCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: SANGRGGTWSSVELREQGLQGHR*FLGASP
Trigger: TGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAG...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 72 bp TCCCAAACCTATCTTCACACTGCCACACTGGCTTCATaGCATCCAACTGGAGTAACACGGAGGACTCGGCAG +
Preference number: 3 (lower is better)
Translates to: SQTYLHTATLAS*HPTGVTRRTRQ
Trigger: CTGCCGAGTCCTCCGTGTTACTCCAGTTGGATGTCATGAAGCCAGTGTGGCAGTGTGAAGATAGGTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp TGGAAGAATCAACCTTTGTTTGGCCCCAACTGCCTCTaGCACTGTCGACACACTTGGGAGTGTTTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: WKNQPLFGPNCL*HCRHTWECFLE
Trigger: CTCCAGGAAACACTCCCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAACAAAGGTTGATTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp GTGGGCTGGACTTCCCTACTGATTACCATCGTCTTTTaGTCATCATCCTTTGCTCCAACCCTCAAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: VGWTSLLITIVF*SSSFAPTLKAA
Trigger: GGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAAGTCCAGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp TTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTaGCTAAAGGTCCTTAGCATCCTGGCTGGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: FPLPMEENSWQT*LKVLSILAGAC
Trigger: ACAGGCACCAGCCAGGATGCTAAGGACCTTTAGCCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp CCATCTTGCCCCCTGCCATCTGAGGCTTTCTGCACTTaGCAGCTTTTCATCATAGGGCTTTGCACTTGTCCT +
Preference number: 3 (lower is better)
Translates to: PSCPLPSEAFCT*QLFIIGLCTCP
Trigger: AGGACAAGTGCAAAGCCCTATGATGAAAAGCTGCCAAGTGCAGAAAGCCTCAGATGGCAGGGGGCAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp CAGCAGAGATCTACTGGGAAGCCTGAACTTCTAACCTaGGCCAGCAATAATGAGGTACCCCCTTCACCCCAT +
Preference number: 3 (lower is better)
Translates to: QQRSTGKPELLT*ASNNEVPPSPH
Trigger: ATGGGGTGAAGGGGGTACCTCATTATTGCTGGCCCAGGTTAGAAGTTCAGGCTTCCCAGTAGATCTCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGGCTGCTGTCTTAATCTaGAGGGTGGAAACCAGCCCC +
Preference number: 3 (lower is better)
Translates to: NRLNTEADKRISIRGLGAAAVLI*RVETSP
Trigger: GGGGCTGGTTTCCACCCTCAAGATTAAGACAGCAGC...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp TCGCGCAGTGTCTGGCACATCATAAGACTTGATGAATaGTTGAATGGTGGCTGGAAGCCTCTTCGATGGGGG +
Preference number: 3 (lower is better)
Translates to: SRSVWHIIRLDE*LNGGWKPLRWG
Trigger: CCCCCATCGAAGAGGCTTCCAGCCACCATTCAATCATTCATCAAGTCTTATGATGTGCCAGACACTGCGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp ACATACACATTCCAGCAAACTCAGGGTGAGATGCATTaGAGGTTGCTAGGCCTGAAGCTGGAGGTGCATCCA +
Preference number: 3 (lower is better)
Translates to: TYTFQQTQGEMH*RLLGLKLEVHP
Trigger: TGGATGCACCTCCAGCTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTGAGTTTGCTGGAATGTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp AGCTCCCTGGTACATTCGGGTCTGCCTTTCTACCACTaGAAATGGATGTTTCCTCTCCCCATGGAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: SSLVHSGLPFYH*KWMFPLPMEEN
Trigger: ATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCA +
Preference number: 3 (lower is better)
Translates to: QHVFLAISLQESRCKRLLGHCPA*PHLAES
Trigger: TGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCC...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR TCA 72 bp GTGATCAGCATGCTCCTCTTCTCAGAAGGGTGTTCATaGAGGGTACAGCTCCTAAGAACCCAACATACCACC +
Preference number: 3 (lower is better)
Translates to: VISMLLFSEGCS*RVQLLRTQHTT
Trigger: GGTGGTATGTTGGGTTCTTAGGAGCTGTACCCTTCATGAACACCCTTCTGAGAAGAGGAGCATGCTGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp CCCAAAGCATACATACACATTCCAGCAAACTCAGGGTaGGATGCATTGCAGGTTGCTAGGCCTGAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: PKAYIHIPANSG*DALQVARPEAG
Trigger: TCCAGCTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTGAGTTTGCTGGAATGTGTATGTATGCTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp AAGGCAGAATTGGGAGGGACTTTTGGACTCAAGGAATaGCATGGCACCAGGGTGGTATCAGCAGAGATCTAC +
Preference number: 3 (lower is better)
Translates to: KAELGGTFGLKE*HGTRVVSAEIY
Trigger: GTAGATCTCTGCTGATACCACCCTGGTGCCATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAATTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp GAATCACTCACATTTCTGGAACAATCACCCTCACTTTaGTCCTGGGACAAGGCTTCTTCCTCTCTCGGGAAC +
Preference number: 3 (lower is better)
Translates to: ESLTFLEQSPSL*SWDKASSSLGN
Trigger: GTTCCCGAGAGAGGAAGAAGCCTTGTCCCAGGAGCAAAGTGAGGGTGATTGTTCCAGAAATGTGAGTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp AGAACCCAACATACCACCCTCCATTTGGAAGCTCCCTaGTACATTCGGGTCTGCCTTTCTACCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: RTQHTTLHLEAP*YIRVCLSTTGN
Trigger: ATTTCCAGTGGTAGAAAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTATGTTGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp GGACTTTTGGACTCAAGGAATGACATGGCACCAGGGTaGTATCAGCAGAGATCTACTGGGAAGCCTGAACTT +
Preference number: 3 (lower is better)
Translates to: GLLDSRNDMAPG*YQQRSTGKPEL
Trigger: AAGTTCAGGCTTCCCAGTAGATCTCTGCTGATACCACCCTGGTGCCATGTCATTCCTTGAGTCCAAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp TTCCCTACTGATTACCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAACCACTGTCGACACACTaGGGAGTGTTTCCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: FPTDYHRLLLIILCSNPQPLSTH*GVFPGA
Trigger: AGCTCCAGGAAACACTCCCAAGTGTGTCGACAGTGG...TTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp CATTTTTACAGGACCCACTCAGAAACCACCTGTTCATaGCCCAGTCTCAGATCTTCTCAGCTGGAAAGGGTC +
Preference number: 3 (lower is better)
Translates to: HFYRTHSETTCS*PSLRSSQLERV
Trigger: GACCCTTTCCAGCTGAGAAGATCTGAGACTGGGTCATGAACAGGTGGTTTCTGAGTGGGTCCTGTAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp TGCTCCAGAAGTGAAGTCCCAAACCTATCTTCACACTaGCACACTGGCTTCATGACATCCAACTGGAGTAAC +
Preference number: 3 (lower is better)
Translates to: CSRSEVPNLSSH*HTGFMTSNWSN
Trigger: GTTACTCCAGTTGGATGTCATGAAGCCAGTGTGGCAGTGTGAAGATAGGTTTGGGACTTCACTTCTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp AAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTaGCAGACTTGGCTAAAGGTCCTTAGCATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: KWMFPLPMEENS*QTWLKVLSILA
Trigger: AGCCAGGATGCTAAGGACCTTTAGCCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp GGGAGACTCCGATATGTAGAGAGAAGAAGGCAGAATTaGGAGGGACTTTTGGACTCAAGGAATGACATGGCA +
Preference number: 3 (lower is better)
Translates to: GRLRYVERRRQN*EGLLDSRNDMA
Trigger: TGCCATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAATTCTGCCTTCTTCTCTCTACATATCGGAGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp AGTTATATGAGCTTTGTGTACAAGAGAAATTGGACTAGAGGGTGGGGCAGCCAGCCCACGGTGGGAAAGTaGGATTTTTCCAGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: SYMSFVYKRNWTRGWGSQPTVGK*DFSRKQ
Trigger: CTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGGG...CTGGCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACACAAAGCTCATATAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp TGGCTTGTAATTTCCTCTCCTCTCTCTTATATTCGACTTGAACTTCCAGTTCCAGGAGGTGCATCCAAGTaGCCTTTTCCTCTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: WLVISSPLSYIRLELPVPGGASK*PFPLLP
Trigger: TGGGAGGAGAGGAAAAGGCAACTTGGATGCACCTCC...TGGAACTGGAAGTTCAAGTCGAATATAAGAGAGAGGAGAGGAAATTACAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp TGTGCAACTAGATGCAAGTGGGCTGGACTTCCCTACTaGTTACCATCGTCTTTTGCTCATCATCCTTTGCTC +
Preference number: 3 (lower is better)
Translates to: CATRCKWAGLPY*LPSSFAHHPLL
Trigger: GAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAAGTCCAGCCCACTTGCATCTAGTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp CTCTGTGGTTTAGCTTTAAACACCCTACACAAACTGTaGCACCCGGATCTTTCTGGTACTCGGCTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: LCGLALNTLHKL*HPDLSGTRLPL
Trigger: TAAGGGAAGCCGAGTACCAGAAAGATCCGGGTGTCACAGTTTGTGTAGGGTGTTTAAAGCTAAACCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR-3UTR CAA 90 bp CTTCTACTTTCTTATCCCTCAACCTCTATTCTCTACTCAGCAGCCAGCATGATCATGGTCCTGCCTACTTaGATCCAGAGGGAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: LLLSYPSTSILYSAASMIMVLPT*IQREKK
Trigger: CTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCAT...GATCATGCTGGCTGCTGAGTAGAGAATAGAGGTTGAGGGATAAGAAAGTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp CTCTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTaGAACCAGGATCCCTGCTCAACCCCTCTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: LSSLEISISNRH*NQDPCSTPLER
Trigger: TCTTTCCAGAGGGGTTGAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR TCA 72 bp CCTAGGATAGCTTATGTTGATGAAATGCTCCAGAAGTaGAGTCCCAAACCTATCTTCACACTGCCACACTGG +
Preference number: 3 (lower is better)
Translates to: PRIAYVDEMLQK*SPKPIFTLPHW
Trigger: CCAGTGTGGCAGTGTGAAGATAGGTTTGGGACTTCACTTCTGGAGCATTTCATCAACATAAGCTATCCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp AAACACCCTACACAAACTGTGACACCCGGATCTTTCTaGTACTCGGCTTCCCTTAACACATTCTACTTCTCT +
Preference number: 3 (lower is better)
Translates to: KHPTQTVTPGSF*YSASLNTFYFS
Trigger: AGAGAAGTAGAATGTGTTAAGGGAAGCCGAGTACCAGAAAGATCCGGGTGTCACAGTTTGTGTAGGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp AATAGTAACATATCTAGAGCCGCGGTTCTCAAAGCATaGTCCAAGGTCCTCTGGGGGTTCCCTAAAACATTT +
Preference number: 3 (lower is better)
Translates to: NSNISRAAVLKA*SKVLWGFPKTF
Trigger: AAATGTTTTAGGGAACCCCCAGAGGACCTTGGATCATGCTTTGAGAACCGCGGCTCTAGATATGTTACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp TCCTCTTCTGCTAGAATTATAAGCTTCATGAGTGTTTaGTGTATCCCCAGTCTCAAGAACAGTGTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: SSSARIISFMSV*CIPSLKNSVWH
Trigger: GTGCCAGACACTGTTCTTGAGACTGGGGATACAGCAAACACTCATGAAGCTTATAATTCTAGCAGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp GAGATGAGGGAAGTGGTTCAAGGCAACACGTTTTTCTaGCTATATCATTACAAGAGAGCAGGTGCAAAAGGT +
Preference number: 3 (lower is better)
Translates to: EMREVVQGNTFF*LYHYKRAGAKG
Trigger: ACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCTCATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR-3UTR CAA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGATACCAGAAAACACATaGTCCTTTGACAGTACCTTA +
Preference number: 3 (lower is better)
Translates to: NRLNTEADKRISIRGLGAIPENT*SFDSTL
Trigger: TAAGGTACTGTCAAAGGACAATGTGTTTTCTGGTAT...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp ACAAGTGCTCAGCAGCCACATGTACTTAGATGCTACTaGAATAGTAACATATCTAGAGCCGCGGTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: TSAQQPHVLRCY*NSNISRAAVLK
Trigger: TTTGAGAACCGCGGCTCTAGATATGTTACTATTTCAGTAGCATCTAAGTACATGTGGCTGCTGAGCACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp GCTTGGCATACAACCTGCTTCTCCACTTCATTCAAGTaGAGCTGTGCTCTCCACTGTTATTTTTCTAAAAGT +
Preference number: 3 (lower is better)
Translates to: AWHTTCFSTSFK*SCALHCYFSKS
Trigger: ACTTTTAGAAAAATAACAGTGGAGAGCACAGCTTCACTTGAATGAAGTGGAGAAGCAGGTTGTATGCCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR GCA 72 bp GTTCAAATAAACTCACATCCTATTCATCTTTGCCTCTaGCACTGTGCACGTAACACAGTCCCTTGTTATTCT +
Preference number: 3 (lower is better)
Translates to: VQINSHPIHLCL*HCARNTVPCYS
Trigger: AGAATAACAAGGGACTGTGTTACGTGCACAGTGGCAGAGGCAAAGATGAATAGGATGTGAGTTTATTTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp GTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTaGTCTATTTATCTGGACTTAGATGGTATTCCCATT +
Preference number: 3 (lower is better)
Translates to: VGLIYLEGMRWK*SIYLDLDGIPI
Trigger: AATGGGAATACCATCTAAGTCCAGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp AGCAAGTCCTGTTACCTCTACTTTGAAACCACTTTTTaGATTCTGCTTGATCTCATCACTGCCAATATGATC +
Preference number: 3 (lower is better)
Translates to: SKSCYLYFETTF*ILLDLITANMI
Trigger: GATCATATTGGCAGTGATGAGATCAAGCAGAATTCAAAAAGTGGTTTCAAAGTAGAGGTAACAGGACTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR TCA 72 bp CTACTTCTCTGTCATACCAGAAAACACATTGTCCTTTaGCAGTACCTTATCTTTCCCCATCACTACATATTG +
Preference number: 3 (lower is better)
Translates to: LLLCHTRKHIVL*QYLIFPHHYIL
Trigger: CAATATGTAGTGATGGGGAAAGATAAGGTACTGTCAAAGGACAATGTGTTTTCTGGTATGACAGAGAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CCA 72 bp ATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTTaGTTTCCTCAAAGTAGAGAAAGAAAATACAGGGAA +
Preference number: 3 (lower is better)
Translates to: ISLQESRCKRLL*FPQSRERKYRE
Trigger: TTCCCTGTATTTTCTTTCTCTACTTTGAGGAAACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAATGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCCACACTGGCCTTTCCCTaGGCCTCAGGGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ARGQMQRGVLSRTLPSLATLAFP*ASGEVP
Trigger: TGGGACCTCCCCTGAGGCTCAGGGAAAGGCCAGTGT...GGCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGACACTGGCCTTTCCCTaGGCCTCAGGGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGTLAFP*ASGEVP
Trigger: TGGGACCTCCCCTGAGGCTCAGGGAAAGGCCAGTGT...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACACTGCGCGCGCGCCCCTaGGGACCAGCATCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTLRARP*GPASFP
Trigger: CGGGAAGGATGCTGGTCCGCAGGGGCGCGCGCGCAG...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCCCAGCCTTTCTCCTGTaGGGCTCCAGCTGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCPAFLL*GSSCGD
Trigger: ATCGCCGCAGCTGGAGCCCCACAGGAGAAAGGCTGG...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCTTGAGCTCCCCTGGTTaGTCCCAAAGGCGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCLSSPG*SQRRRA
Trigger: CGCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAA...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCGGCCCCAACTGCCTCTaGCACTGTCGACACACTTGG +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCGPNCL*HCRHTW
Trigger: CCAAGTGTGTCGACAGTGGCAGAGGCAGTTGGGGCC...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCTGTAGTCTGACCTCCTaGCTCTCCCCACCCCCACTC +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCCSLTS*LSPPPL
Trigger: GAGTGGGGGTGGGGAGAGGCAGGAGGTCAGACTACA...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALGRFWR*PGRSRF
Trigger: AAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCGCCTCATTGCCATGTTaGGACACAGGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSASLPC*DTGCRL
Trigger: CAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGC...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTAGCGCTTTGGGAGGCTaGGGTGGGTGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSSALGG*GGWIMR
Trigger: CCTCATGATCCACCCACCTCAGCCTCCCAAAGCGCT...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCGCGGTTCTCAAAGCATaGTCCAAGGTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCAVLKA*SKVLWG
Trigger: CCCCCAGAGGACCTTGGATCATGCTTTGAGAACCGC...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGGAGGGAGGCTGGGTTaGCGCCGTCGAGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PSLAPPSRVTIRYQPPRVGGRLG*RRRGQK
Trigger: TTTTTGGCCTCGACGGCGGCAACCCAGCCTCCCTCC...AACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGAGCTCATCTTTCCCCTaGGGGTTCCTGTATTGCGGC +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQSSSFP*GFLYCG
Trigger: GCCGCAATACAGGAACCCCCAGGGGAAAGATGAGCT...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCAGCAAACAAGGACCTaGGTCACCCACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQQQTRT*VTHRRG
Trigger: GCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTG...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
3UTR CAA 72 bp TGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCACAATTCGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: CREGCSLGHCPA*PHLAESQFGIS
Trigger: GCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCGGTTGTCTCTGGAGTTaGAACGTTGGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSGCLWS*NVGWGG
Trigger: ACCACCCCAGCCAACGTTTCAACTCCAGAGACAACC...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCTCGGAAGAGTACAGGTaGGAGGCTCAGCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCSEEYR*EAQLQD
Trigger: GTCTTGGAGCTGAGCCTCTCACCTGTACTCTTCCGA...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGAACCAGCCCCCTCCCTaGGTTGGCTGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWNQPPP*VGCQVS
Trigger: AGAGACCTGGCAGCCAACTCAGGGAGGGGGCTGGTT...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGTCCCGAGGTGACCAGTaGAATCAGGGTCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQSRGDQ*NQGLLG
Trigger: TCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGA...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCCTGTGGGGCTCCAGCTaGGGCGATTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSLWGSS*GDSSGN
Trigger: ATTTCCTGATGAATCGCCGCAGCTGGAGCCCCACAG...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 4 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCCTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGLNGRF*RWPGRS
Trigger: GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAG...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCAAGAAGACCAGAGTCTaGCTCCAGGGAGCCGAATGT +
Preference number: 4 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSKKTRV*LQGAEC
Trigger: ACATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTT...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGGAGAGACGCACCGAGTaGAAGACACTACTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGERRTE*KTLLGL
Trigger: CAAGCCGAGTAGTGTCTTCCACTCGGTGCGTCTCTC...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCACCGGTCCCGTTTTCCTaGGCCCCTCGGTTCACACTG +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPPVPFS*APRFTL
Trigger: CAGTGTGAACCGAGGGGCTCAGGAAAACGGGACCGG...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGCCGGTCCCGTTTTCCTaGGCCCCTCGGTTCACACTG +
Preference number: 4 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRPVPFS*APRFTL
Trigger: CAGTGTGAACCGAGGGGCTCAGGAAAACGGGACCGG...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCTGGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGGTGCCTGTGTCTGCTaGGGTGCTCCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGSFSRPWLSPVTRLPKEGACVC*GAPSSL
Trigger: CAGGGAAGAGGGAGCACCTCAGCAGACACAGGCACC...TTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp ACCAGAGTCTGGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCAGGCCCCATGTAGTCTaGCCTCCTGCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TRVWLQGAECVKDRSLPARPHVV*PPASPH
Trigger: GTGGGGAGAGGCAGGAGGTCAGACTACATGGGGCCT...GGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGCTGCGCGCGCGCCCCTaGGGACCAGCATCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGLRARP*GPASFP
Trigger: CGGGAAGGATGCTGGTCCGCAGGGGCGCGCGCGCAG...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR GCA 90 bp ACACTGCCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCAGCATCAGCATCAGCCTaGTCCTCCCCACACAGCACT +
Preference number: 4 (lower is better)
Translates to: TLPSLAPPSRVTIRYQPPASASA*SSPHST
Trigger: AGTGCTGTGTGGGGAGGAGCAGGCTGATGCTGATGC...TGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp TCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAAGATGCAGAGAGGGGTaGTCTCTCGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPVTRLPKEDQSLAPGSRRCREG*SLGHCP
Trigger: TGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCT...TCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCCGGTGTCACTCTTGCATaGAGACACACCCAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: ARGQMQRGVLSRTLPSLAGVTLA*RHTQLR
Trigger: TCTTAGCTGGGTGTGTCTGCATGCAAGAGTGACACC...GGCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCACCAGCCTTTCTCCTGTaGGGCTCCAGCTGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPPAFLL*GSSCGD
Trigger: ATCGCCGCAGCTGGAGCCCCACAGGAGAAAGGCTGG...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCACCAGCAGTAGACACTaGGGCCTCACCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGTSSRH*GLTSDW
Trigger: CCAGTCTGAGGTGAGGCCTCAGTGTCTACTGCTGGT...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGACCAGCAGTAGACACTaGGGCCTCACCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWTSSRH*GLTSDW
Trigger: CCAGTCTGAGGTGAGGCCTCAGTGTCTACTGCTGGT...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAACCGGTCCCGTTTTCCTaGGCCCCTCGGTTCACACTG +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQEPVPFS*APRFTL
Trigger: CAGTGTGAACCGAGGGGCTCAGGAAAACGGGACCGG...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCGAAGGGGGTCCTGTGTaGGTGCTGCAAGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLEGGPV*VLQGHR
Trigger: TCGATGGCCTTGCAGCACTCACACAGGACCCCCTTC...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTTCGGAAGAGTACAGGTaGGAGGCTCAGCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PSLAPPSRVTIRYQPPRVSEEYR*EAQLQD
Trigger: GTCTTGGAGCTGAGCCTCTCACCTGTACTCTTCCGA...AACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTCCCGAGGTGACCAGTaGAATCAGGGTCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSSRGDQ*NQGLLG
Trigger: TCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGA...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATACCTCATGGCCATCTTaGCCCCTGCCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRHTFTQRRPESGSREPNTSWPS*PLPSEA
Trigger: AGCCTCAGATGGCAGGGGGCAAGATGGCCATGAGGT...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGCCTCACCTCAGACTaGGCAAGGAGCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPGLTSD*ARSREH
Trigger: ATGCTCCCTGCTCCTTGCCCAGTCTGAGGTGAGGCC...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: PCSTPLERNQQQTRTWVTGRFWR*PGRSRF
Trigger: AAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCC...GGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCAAGAAGACCAGAGTCTaGCTCCAGGGAGCCGAATGT +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALKKTRV*LQGAEC
Trigger: ACATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTT...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGACTTGGGAGTGTTTCCTaGAGCTCCTCAGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SPVTRLPKEDQSLAPGSRLGSVS*SSSALP
Trigger: AGGGAGTGCTGAGGAGCTCCAGGAAACACTCCCAAG...TCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGTTCCTGGGCTCACTGTaGGCGCCGAAGAAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRFLGSL*APKKPN
Trigger: GTTCGGCTTCTTCGGCGCCCACAGTGAGCCCAGGAA...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ACCAGAGTCTGGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCAGACACTACTCGGCTTaGCCAGGACGCGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TRVWLQGAECVKDRSLPARHYSA*PGRALP
Trigger: GGGAAGAGCGCGTCCTGGCCAAGCCGAGTAGTGTCT...GGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
3UTR CAA 72 bp CGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTaGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RVTIRYQPPRVV*LNGRFWRWPGR
Trigger: CCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCTGTTGTCAAGACTCATaGACCCAGAAGGCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCCCQDS*TQKAAN
Trigger: GTTTGCTGCCTTCTGGGTTCATGAGTCTTGACAACA...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGCAGGGCTCCCGAGGTaGCCAGTGCAATCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTAGLPR*PVQSGS
Trigger: AGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGC...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGCTGCTACTAACTTaGGCTCCCCTGGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTWLLLT*APLVGP
Trigger: GGGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCA...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAAGATGCAGAGAGGGGTaGTCTCTCGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPRCREG*SLGHCP
Trigger: TGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCT...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAAGATGCAGAGAGGGGTaGTCTCTCGGACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTRCREG*SLGHCP
Trigger: TGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCT...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAATGACCATATGGGGGTaGAGAGCAAGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRMTIWG*RARKGL
Trigger: GAGCCCCTTCCTTGCTCTGCACCCCCATATGGTCAT...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp AGGATCCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCAGAGGGAACCAGCTaGCCCACCCCACCCCGCAAT +
Preference number: 4 (lower is better)
Translates to: RIPAQPLWKEINSKQGPGSEGTS*PTPPRN
Trigger: ATTGCGGGGTGGGGTGGGGCAGCTGGTTCCCTCTGA...CCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAGAGGGAGGGTGCAGCTaGATGTGCAGACTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSREGGCS*MCRLLS
Trigger: AGAAAGGAGTCTGCACATGCAGCTGCACCCTCCCTC...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTGGCCTCACCTCAGACTaGGCAAGGAGCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAGLTSD*ARSREH
Trigger: ATGCTCCCTGCTCCTTGCCCAGTCTGAGGTGAGGCC...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCCCAGCCTTTCTCCTGTaGGGCTCCAGCTGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSPAFLL*GSSCGD
Trigger: ATCGCCGCAGCTGGAGCCCCACAGGAGAAAGGCTGG...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAAGGCAGCCATCGCCTCCCCTCGGTTCACACTaGCCTTTCCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSFAHHPLLQPSRQPSPPLGSH*PFPEPQ
Trigger: CTGAGGCTCAGGGAAAGGCCAGTGTGAACCGAGGGG...AGGCGATGGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAACCCCTCGGTTCACACTaGCCTTTCCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQEPLGSH*PFPEPQ
Trigger: CTGAGGCTCAGGGAAAGGCCAGTGTGAACCGAGGGG...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCCCCTCGGTTCACACTaGCCTTTCCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PCSTPLERNQQQTRTWVTPLGSH*PFPEPQ
Trigger: CTGAGGCTCAGGGAAAGGCCAGTGTGAACCGAGGGG...GGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGGCCGTTTCTGGAGGTaGCCTGGCCGGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTGRFWR*PGRSRF
Trigger: AAAACGGGACCGGCCAGGCCACCTCCAGAAACGGCC...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGAGCTTCTCCAGACCTTaGCTTTCCCCCGTCACACGT +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWSFSRP*LSPVTR
Trigger: ACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCT...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAGGGAGGAGGAAGCCATaGAGATCAGAGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPVTRLPKEDQSLAPGSRGRRKP*RSEDKA
Trigger: AGCCTTATCCTCTGATCTCCATGGCTTCCTCCTCCC...TCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTAAAGCAAGAAGGAGATaGGGGTGGAGGAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSKARRR*GWRSAE
Trigger: TTCAGCACTCCTCCACCCCCATCTCCTTCTTGCTTT...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GTCGACACACTTGGGAGTGTTTCCTGGAGCTCCTCAGCACTCCCTCCCCAACTTAATTGGACTAGAGGGTaGGGCAGCCAGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VDTLGSVSWSSSALPPQLNWTRG*GSQGEK
Trigger: CTTCTCTCCCTGGCTGCCCCACCCTCTAGTCCAATT...AAGTTGGGGAGGGAGTGCTGAGGAGCTCCAGGAAACACTCCCAAGTGTGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCCCTCGTTCAGCTTTCTaGAGAGGCCCCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGPRSAF*RGPIPL
Trigger: AAGTGGGATGGGGCCTCTCCAGAAAGCTGAACGAGG...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CCA 90 bp TTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCAGGGCTGTGAGACACTaGATGGGAGAGGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LPHLAESQFGISHHVLSCRAVRH*MGEGPK
Trigger: TTTGGGCCCCTCTCCCATCCAGTGTCTCACAGCCCT...GCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGCAGGGCTCCCGAGGTaGCCAGTGCAATCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKAGLPR*PVQSGS
Trigger: AGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGC...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCCACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGHVLSC*MAVSGG
Trigger: ACCTCCAGAAACGGCCATTCAGCAAGACAACACGTG...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AGGATCCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGGAAGGGGGTCCTGTGTaGGTGCTGCAAGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: RIPAQPLWKEINSKQGPGEGGPV*VLQGHR
Trigger: TCGATGGCCTTGCAGCACTCACACAGGACCCCCTTC...CCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGGATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGGAAGGGGGTCCTGTGTaGGTGCTGCAAGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGEGGPV*VLQGHR
Trigger: TCGATGGCCTTGCAGCACTCACACAGGACCCCCTTC...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCGGCAGCCATCGCCTTTaGGGGAAGACTCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: PCSTPLERNQQQTRTWVTGSHRL*GKTLNL
Trigger: GAGGTTCAGAGTCTTCCCTCAAAGGCGATGGCTGCC...GGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CCGAACCTCATGGCCTCCTGTGATCTTTGTCCTGGGGCTCCTCCAGGACCTGCTGCTGGACTTCCCTACTaGTTACCATCGTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PNLMASCDLCPGAPPGPAAGLPY*LPSSFA
Trigger: AGCAAAAGACGATGGTAATCAGTAGGGAAGTCCAGC...AGCAGGTCCTGGAGGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAAGGTGTCAACAGCTaGATGGGGAACCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: LAFPRHTFTQRRPESGSREGVNS*MGNLDP
Trigger: TGGGTCCAGGTTCCCCATTCAGCTGTTGACACCTTC...CCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCATACAGCAGTCCCCAATaGTGGAAGAAAAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAYSSPQ*WKKSQG
Trigger: CCCTTGGCTTTTCTTCCATCATTGGGGACTGCTGTA...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR GCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGCATCAGCATCAGCCTaGTCCTCCCCACACAGCACT +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESASASA*SSPHST
Trigger: AGTGCTGTGTGGGGAGGAGCAGGCTGATGCTGATGC...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCTGGCTTGCAACATCTTaGTCAGTGAAATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSWLATS*SVKSRI
Trigger: GATCCTAGATTTCACTGAGCAAGATGTTGCAAGCCA...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAGGGTGCACAGGACATTaGCCCTTCCCTTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRGCTGH*PFPLFC
Trigger: GCAAAACAAAGGGAAGGGGCAATGTCCTGTGCACCC...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAAGATGTGCAACTAGATaGAAGTGGGCTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: SPVTRLPKEDQSLAPGSRRCATR*KWAGLP
Trigger: GGGAAGTCCAGCCCACTTGCATCTAGTTGCACATCT...TCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCACAATCACCCTCACTTTaGTCCTGGGACAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAQSPSL*SWDKAS
Trigger: AGAAGCCTTGTCCCAGGAGCAAAGTGAGGGTGATTG...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCAGCTGGTGTAGAACCTaGCTAACTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALSWCRT*LTLQSH
Trigger: ATGAGACTGGAGAGTTAGGCAGGTTCTACACCAGCT...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGGGCCTCACCTCAGACTaGGCAAGGAGCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGGLTSD*ARSREH
Trigger: ATGCTCCCTGCTCCTTGCCCAGTCTGAGGTGAGGCC...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGAAATTTCTGTTCTGTTaGCCAAGACCAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQKFLFC*PRPAVD
Trigger: GTCTACTGCTGGTCTTGGCCAACAGAACAGAAATTT...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTGCACATGGAGCTCAGTaGAACTTAGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSAHGAQ*NLENKG
Trigger: TCCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGC...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAGGGAGGAGGAAGCCATaGAGATCAGAGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRGRRKP*RSEDKA
Trigger: AGCCTTATCCTCTGATCTCCATGGCTTCCTCCTCCC...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGCTGGGAAGCCTTCCATaGTCTTCCACGGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LAFPRHTFTQRRPESGSRLGSLP*SSTASM
Trigger: CATGGAAGCCGTGGAAGACCATGGAAGGCTTCCCAG...CCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ACACTGCCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCATTTCTTCCTGAAGAGTaGTCAGGGTTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLPSLAPPSRVTIRYQPPFLPEE*SGFQLQ
Trigger: CTGGAGCTGGAACCCTGACCACTCTTCAGGAAGAAA...TGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR TCA 90 bp CCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAAGGCAGCCATCGCCTGGTTGTCTCTGGAGTTaGAACGTTGGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSFAHHPLLQPSRQPSPGCLWS*NVGWGG
Trigger: ACCACCCCAGCCAACGTTTCAACTCCAGAGACAACC...AGGCGATGGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAACCAGCAGTAGACACTaGGGCCTCACCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTTSSRH*GLTSDW
Trigger: CCAGTCTGAGGTGAGGCCTCAGTGTCTACTGCTGGT...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCATCAGGAAATAGCCAGTaGTGCCCAAGACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPSGNSQ*CPRQPA
Trigger: TGCTGGCTGTCTTGGGCATCACTGGCTATTTCCTGA...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGATGGTCCTGCCTACTTTaGTCCAGAGGGAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRWSCLL*SRGRKR
Trigger: CCTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCA...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACACATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTHLLGD*GNSSTQ
Trigger: CTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATG...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCAATTTCCAACCGTCATTaGAACCAGGATCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAISNRH*NQDPCS
Trigger: TGAGCAGGGATCCTGGTTTCAATGACGGTTGGAAAT...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATTTTCTTCAGGTTGCTaGCTGGGCCATCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTFSSGC*LGHQTQ
Trigger: CTGGGTCTGATGGCCCAGTCAGCAACCTGAAGAAAA...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR GCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTGGGGTCCTGTGTGAGTaGTGCAAGGCCATCGATTGT +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAGVLCE*CKAIDC
Trigger: ACAATCGATGGCCTTGCAGCACTCACACAGGACCCC...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGAGCAGGTGGCGCCATTaGTGTACCAGGACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWSRWRH*CTRTLR
Trigger: CCTGAGCGTCCTGGTACAGCAATGGCGCCACCTGCT...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCACTTTTTGAATTCTaGTTGATCTCATCACTGCCA +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQPLFEF*LISSLP
Trigger: TGGCAGTGATGAGATCAAGCAGAATTCAAAAAGTGG...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGACCGGGAGGCAGAGCTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRPGGRA*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAAGCTCTGCCTCCCGG...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGGTCCTGTCTCTCATTTaGACTAGCCACATTACAAGT +
Preference number: 4 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGVLSLI*TSHITS
Trigger: ACTTGTAATGTGGCTAGTGCAAATGAGAGACAGGAC...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCTGTTCGGGCTCCAGATaGCTCGTTCAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPHLAESQFGISHHVLSCCSGSR*LVQLSG
Trigger: TCCAGAAAGCTGAACGAGGCATCTGGAGCCCGAACA...GCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTAGCTTCTCCAGACCTTaGCTTTCCCCCGTCACACGT +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLASFSRP*LSPVTR
Trigger: ACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCT...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTAGCTTCTCCAGACCTTaGCTTTCCCCCGTCACACGT +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESSFSRP*LSPVTR
Trigger: ACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCT...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ACCAGAGTCTGGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCGGTAGAGGGGGCACATaGAGCTCAGTGGAACTTAGA +
Preference number: 4 (lower is better)
Translates to: TRVWLQGAECVKDRSLPAGRGGT*SSVELR
Trigger: TCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACC...GGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCGGTAGAGGGGGCACATaGAGCTCAGTGGAACTTAGA +
Preference number: 4 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLGRGGT*SSVELR
Trigger: TCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACC...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCATGGGCTATGACCATATaGGGGTGCAGAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PWLSPVTRLPKEDQSLAPWAMTI*GCRARK
Trigger: CTTCCTTGCTCTGCACCCCCATATGGTCATAGCCCA...TGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCAAACAAGGACCTaGGTCACCCACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQEQQTRT*VTHRRG
Trigger: GCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTG...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCAGGACTTTGGAATTCTaGGTGATTGGGCAAGCCACC +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGRTLEF*VIGQAT
Trigger: GGTGGCTTGCCCAATCACCCAGAATTCCAAAGTCCT...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCCCTGAACTTCTAACCTaGGCCAGCAATAATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALPELLT*ASNNEV
Trigger: TACCTCATTATTGCTGGCCCAGGTTAGAAGTTCAGG...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCATTGGGAGGGACTTTTaGACTCAAGGAATGACATGG +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALIGRDF*TQGMTW
Trigger: CCATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAAT...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTCACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESHVLSC*MAVSGG
Trigger: ACCTCCAGAAACGGCCATTCAGCAAGACAACACGTG...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGCATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKHLLGD*GNSSTQ
Trigger: CTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATG...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGCCTCATGGCCTCCTGTaGTCTTTGTCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NRLNTEADKRISIRGLGAPHGLL*SLSWGS
Trigger: GGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGG...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCGTTGCACAAAATCGATaGCCTATTACTGGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: STWSDAERGALSDTAQPCVAQNR*PITGFV
Trigger: CACAAAACCAGTAATAGGTCATCGATTTTGTGCAAC...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTACCTGCTCCCAGCCATaGTCGTTCTTCTTGCTACGG +
Preference number: 4 (lower is better)
Translates to: GPRETRTELFVLKLGRPVTCSQP*SFFLLR
Trigger: CCGTAGCAAGAAGAACGATCATGGCTGGGAGCAGGT...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAACCCTACACAAACTGTaGCACCCGGATCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTTLHKL*HPDLSG
Trigger: ACCAGAAAGATCCGGGTGTCACAGTTTGTGTAGGGT...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAATCCCGAGGTGACCAGTaGAATCAGGGTCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQESRGDQ*NQGLLG
Trigger: TCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGA...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCGAGGTGCATCCAAGTTaGCTTTTCCTCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSEVHPS*LFLSSH
Trigger: ATGGGAGGAGAGGAAAAGGCAACTTGGATGCACCTC...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCTGTTGTCTTGCTGAATaGCCGTTTCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PCSTPLERNQQQTRTWVTCCLAE*PFLEVA
Trigger: GGCCACCTCCAGAAACGGCCATTCAGCAAGACAACA...GGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTG +
Preference number: 4 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPAIDCS*ELLQTL
Trigger: CAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGC...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGGGCAACACGTTTTTCTaGCTATATCATTACAAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSTWSDAERGALSDTAQGNTFF*LYHYKR
Trigger: TCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCC...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGAAAAGCATCTGTTaGGGGACTGAGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLQKSIC*GTEATA
Trigger: AGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTG...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATATACCACCCTCCATTTaGAAGCTCCCTGGTACATTC +
Preference number: 4 (lower is better)
Translates to: PRHTFTQRRPESGSREPNIPPSI*KLPGTF
Trigger: GAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTAT...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAGAATCAACCTTTGTTTaGCCCCAACTGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTESTFV*PQLPLP
Trigger: TGGCAGAGGCAGTTGGGGCCAAACAAAGGTTGATTC...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAGTCCTTTCCCCTGTGTaGGATAATCTCTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTVLSPV*DNLSQL
Trigger: AAGCTGGGAGAGATTATCCCACACAGGGGAAAGGAC...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGACTCAAAACCCTCCAGTaGCTTCCCAATCTACAACTA +
Preference number: 4 (lower is better)
Translates to: SPVTRLPKEDQSLAPGSRLKTLQ*LPNLQL
Trigger: TAGTTGTAGATTGGGAAGCCACTGGAGGGTTTTGAG...TCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATCTTATCCCAGGTGCCTaGCATAGTACCTGGCTTATA +
Preference number: 4 (lower is better)
Translates to: PRHTFTQRRPESGSREPNLIPGA*HSTWLI
Trigger: TATAAGCCAGGTACTATGCCAGGCACCTGGGATAAG...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTGTGTTTCCATAAACTaGGGTTATCACAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSCVSIN*GYHRGR
Trigger: TCTACCTCTGTGATAACCTCAGTTTATGGAAACACA...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAACATCTTGCTCAGTaGAATCTAGGATCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLQHLAQ*NLGSPA
Trigger: AGCTGGGGATCCTAGATTTCACTGAGCAAGATGTTG...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTTGGTCCTGCCTACTTTaGTCCAGAGGGAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAWSCLL*SRGRKR
Trigger: CCTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCA...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAATCATCACTGCCAATATaGTCACCTGCTCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQESSLPI*SPAPSH
Trigger: ATGGCTGGGAGCAGGTGATCATATTGGCAGTGATGA...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGCCCACCTCTCTGCCCTaGAGGTGTCAACAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWPTSLP*RCQQLN
Trigger: ATTCAGCTGTTGACACCTTCAGGGCAGAGAGGTGGG...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGAACTGCTGGGGTGTGTaGCCATCATCAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGNCWGV*PSSELG
Trigger: ACCCAGTTCTGATGATGGTCACACACCCCAGCAGTT...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR GCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGTTTAGTGGGAGATGTTaGAAGGCTAGTGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWFSGRC*KASASG
Trigger: ACCACTAGCACTAGCCTTGCAACATCTCCCACTAAA...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR GCA 90 bp AGAGATGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGTGGCTTGCAACATCTTaGTCAGTGAAATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: RDVTSSMGVARGQMQRGVWLATS*SVKSRI
Trigger: GATCCTAGATTTCACTGAGCAAGATGTTGCAAGCCA...CACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGTCCTGTGTGAGTGCTGCAAGGCCATCGATTGTTCCTGGGAGCTTCTCCAGAATAGCTCTGGTGGCTTaGAACATCTTGCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: GSCVSAARPSIVPGSFSRIALVA*NILLSE
Trigger: TTCACTGAGCAAGATGTTGCAAGCCACCAGAGCTAT...TCTGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAGCACTCACACAGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGCTGTGGGGCTCCAGCTaGGGCGATTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKLWGSS*GDSSGN
Trigger: ATTTCCTGATGAATCGCCGCAGCTGGAGCCCCACAG...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGTTGTTTGGCCCCAACTaGCTCTGCCACTGTCGACAC +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWLFGPN*LCHCRH
Trigger: GTGTCGACAGTGGCAGAGGCAGTTGGGGCCAAACAA...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTTTGCTCATCATCCTTTaGTCCAACCCTCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLALLIIL*SNPQGS
Trigger: GCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAA...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGCAGGGTGAGATGCATTaGAGGTTGCTAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGQGEMH*RLLGLK
Trigger: CTTCAGGCCTAGCAACCTGCAATGCATCTCACCCTG...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGCTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQLNGRF*RWPGRS
Trigger: GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAG...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTG +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSAIDCS*ELLQTL
Trigger: CAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGC...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCCAGAAAAGCATCTGTTaGGGGACTGAGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPQKSIC*GTEATA
Trigger: AGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTG...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCAGAAAAGCATCTGTTaGGGGACTGAGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAQKSIC*GTEATA
Trigger: AGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTG...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGCCTGCTCAACCCCTCTaGAAAGAAATCAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWPAQPL*KEINSK
Trigger: TTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGCACTGTCGACACACTTaGGAGTGTTTCCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGHCRHT*ECFLEL
Trigger: GAGCTCCAGGAAACACTCCCAAGTGTGTCGACAGTG...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAAATAAGGCCAGCAGGTaGCGCCATTGCTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: DSANGRGGTWSSVELREQNKASR*RHCCTR
Trigger: CCTGGTACAGCAATGGCGCCACCTGCTGGCCTTATT...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTAGAAGCCGAACCTCATaGCCTCCTGTGATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLARSRTS*PPVIFV
Trigger: GACAAAGATCACAGGAGGCCATGAGGTTCGGCTTCT...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCAATTTCGCGCAGTGTCTaGCACATCATAAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAISRSV*HIIRLD
Trigger: ATCAAGTCTTATGATGTGCCAGACACTGCGCGAAAT...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGCTGAATGGGGAACCTaGACCCACCAGTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRAEWGT*THQCGI
Trigger: GATACCACACTGGTGGGTCCAGGTTCCCCATTCAGC...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGCAGGGCTCCCGAGGTaGCCAGTGCAATCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAAGLPR*PVQSGS
Trigger: AGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGC...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGTCAGGAAATAGCCAGTaGTGCCCAAGACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWSGNSQ*CPRQPA
Trigger: TGCTGGCTGTCTTGGGCATCACTGGCTATTTCCTGA...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAACACTGGCCTTTCCCTaGGCCTCAGGGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRATLAFP*ASGEVP
Trigger: TGGGACCTCCCCTGAGGCTCAGGGAAAGGCCAGTGT...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGACACGTGTTGTCTTGCTaGATGGCCGTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRHVLSC*MAVSGG
Trigger: ACCTCCAGAAACGGCCATTCAGCAAGACAACACGTG...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGCCCACCCCCACTCACTaGCACAACCTCATGGCCATC +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQPTPTH*HNLMAI
Trigger: GATGGCCATGAGGTTGTGTCAGTGAGTGGGGGTGGG...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp ACCAGAGTCTGGCTCCAGGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCATAGCTCTGGTGGCTTaGAACATCTTGCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: TRVWLQGAECVKDRSLPAIALVA*NILLSE
Trigger: TTCACTGAGCAAGATGTTGCAAGCCACCAGAGCTAT...GGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCCTGGAGCCAGACTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 4 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTACAAGAGAGCAGGTaGAAAAGGTTACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALLQESR*KRLLWF
Trigger: AAACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAA...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp AGAGATGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGATTACCATCGTCTTTTaGTCATCATCCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RDVTSSMGVARGQMQRGVITIVF*SSSFAP
Trigger: TGGAGCAAAGGATGATGAGCAAAAGACGATGGTAAT...CACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CCTGGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAATTCATCTTTGCCTCTaGCACTGTGCACGTAACACA +
Preference number: 4 (lower is better)
Translates to: PGSFSRPWLSPVTRLPKEIHLCL*HCARNT
Trigger: TGTGTTACGTGCACAGTGGCAGAGGCAAAGATGAAT...TTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGCTCATCTTTCCCCTaGGGGTTCCTGTATTGCGGC +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGSSSFP*GFLYCG
Trigger: GCCGCAATACAGGAACCCCCAGGGGAAAGATGAGCT...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGGCAACACGTTTTTCTaGCTATATCATTACAAGAGA +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALGNTFF*LYHYKR
Trigger: TCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCGCACATGGAGCTCAGTaGAACTTAGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPAHGAQ*NLENKG
Trigger: TCCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGC...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGTTTGTCCTAAAACTTaGGAGGCCTGTTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESVCPKT*EACSRL
Trigger: GAGCCTAGAACAGGCCTCCCAAGTTTTAGGACAAAC...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGTGGGCTATGACCATATaGGGGTGCAGAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKWAMTI*GCRARK
Trigger: CTTCCTTGCTCTGCACCCCCATATGGTCATAGCCCA...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACCAGCAAACAAGGACCTaGGTCACCCACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDQQTRT*VTHRRG
Trigger: GCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTG...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATACACCCGGATCTTTCTaGTACTCGGCTTCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDTPGSF*YSASLN
Trigger: GTTAAGGGAAGCCGAGTACCAGAAAGATCCGGGTGT...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGGGGTGGAGGAGTGCTGAAGGGAAAGGTCTGGCTTTATGGAGATAAGAATGGAAGACGTCACTTCTCCTaGGAAGCCTTCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGVLKGKVWLYGDKNGRRHFS*EAFHGL
Trigger: AAGACCATGGAAGGCTTCCCAGGAGAAGTGACGTCT...TCCATTCTTATCTCCATAAAGCCAGACCTTTCCCTTCAGCACTCCTCCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp GTACAGCTCCTAAGAACCCAACATACCACCCTCCATTaGGAAGCTCCCTGGTACATTCGGGTCTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VQLLRTQHTTLH*EAPWYIRVCLS
Trigger: AGAAAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATGGAGGGTGGTATGTTGGGTTCTTAGGAGCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp CTGCACTTGGCAGCTTTTCATCATAGGGCTTTGCACTaGTCCTTTCCCCTGTGTGGGATAATCTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LHLAAFHHRALH*SFPLCGIISPS
Trigger: GCTGGGAGAGATTATCCCACACAGGGGAAAGGACAAGTGCAAAGCCCTATGATGAAAAGCTGCCAAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGATTACAGAGGTCTGTaGCTGGACAGAAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESDYRGL*LDRRVC
Trigger: ACAAACTCTTCTGTCCAGTCACAGACCTCTGTAATC...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTCAACATCTTGCTCAGTaGAATCTAGGATCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRETRTELFVLKLGRPVQHLAQ*NLGSPA
Trigger: AGCTGGGGATCCTAGATTTCACTGAGCAAGATGTTG...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCTCAGAAGGGTGTTCATaGAGGGTACAGCTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSSEGCS*RVQLLR
Trigger: TCTTAGGAGCTGTACCCTTCATGAACACCCTTCTGA...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCTAGGGAAGAACCTATaGTTAGAGGAGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLLGKNL*LEELEK
Trigger: TTTCTCCAACTCCTCTAATCATAGGTTCTTCCCTAG...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGTTTGAGGGAAGACTCTaGACCTCATCATTTCGCCTC +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGFEGRL*TSSFRL
Trigger: GAGGCGAAATGATGAGGTTCAGAGTCTTCCCTCAAA...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGCCAGCAAACTCAGGGTaGGATGCATTGCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGPANSG*DALQVA
Trigger: AGCAACCTGCAATGCATCTCACCCTGAGTTTGCTGG...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATATAAGACTTGATGAATaGTTGAATGGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRHTFTQRRPESGSREPNIRLDE*LNGGWK
Trigger: CTTCCAGCCACCATTCAATCATTCATCAAGTCTTAT...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATTCCACTTCATTCAAGTaGAGCTGTGCTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDSTSFK*SCALHC
Trigger: ACAGTGGAGAGCACAGCTTCACTTGAATGAAGTGGA...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGAGATGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGTTCAGGTCAGATTGGTaGTTTTTCATAAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RDVTSSMGVARGQMQRGVFRSDW*FFISWS
Trigger: ACTCCAACTTATGAAAAAGCACCAATCTGACCTGAA...CACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp AGTTGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTCCAGCTGTATGACCATATGGGGGTaGAGAGCAAGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SWIFPESRQILQGKLSSCMTIWG*RARKGL
Trigger: GAGCCCCTTCCTTGCTCTGCACCCCCATATGGTCAT...ACAGCTGGACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCACAGAGGTCTGTGACTaGACAGAAGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSTEVCD*TEEFVF
Trigger: AAACACAAACTCTTCTGTCCAGTCACAGACCTCTGT...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGAGCAGGGAGCATACCTaGGCCCCAGCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQSREHT*APASAS
Trigger: TGATGCTGATGCTGGGGCCCAGGTATGCTCCCTGCT...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTTTTTCAGGTCAGATTaGTGCTTTTTCATAAGTTGG +
Preference number: 4 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSFFRSD*CFFISW
Trigger: CCAACTTATGAAAAAGCACCAATCTGACCTGAAAAA...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTTTTCAGGTCAGATTaGTGCTTTTTCATAAGTTGG +
Preference number: 4 (lower is better)
Translates to: CHLQHGGSTWSDAERGALFFRSD*CFFISW
Trigger: CCAACTTATGAAAAAGCACCAATCTGACCTGAAAAA...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCAAGTCCACAGTGTCTTaGAGGAGAGATGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSKSTVS*RRDEGS
Trigger: ACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTT...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGGGTAGAGGGGGCACATaGAGCTCAGTGGAACTTAGA +
Preference number: 4 (lower is better)
Translates to: NRLNTEADKRISIRGLGAGRGGT*SSVELR
Trigger: TCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACC...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTGTTTGTCCTAAAACTTaGGAGGCCTGTTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRETRTELFVLKLGRPVVCPKT*EACSRL
Trigger: GAGCCTAGAACAGGCCTCCCAAGTTTTAGGACAAAC...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GACAGAAAAGCATCTGTTGGGGGACTGAGGCAACAGCTCAACCCAGGAGTCGGCCTGAAGGGAAAGGTCTaGCTTTATGGAGATAAGAAT +
Preference number: 4 (lower is better)
Translates to: DRKASVGGLRQQLNPGVGLKGKV*LYGDKN
Trigger: ATTCTTATCTCCATAAAGCCAGACCTTTCCCTTCAG...GCCGACTCCTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATGCTTTTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATTTCATGACATCCAACTaGAGTAACACGGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDFMTSN*SNTEDS
Trigger: CGAGTCCTCCGTGTTACTCCAGTTGGATGTCATGAA...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp AGAGATGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGAATCACTCACATTTCTaGAACAATCACCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: RDVTSSMGVARGQMQRGVNHSHF*NNHPHF
Trigger: AAAGTGAGGGTGATTGTTCCAGAAATGTGAGTGATT...CACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp TCATCTGTCCCTCCCACATCCACCCAATGTAAAGACTaGACAGAAGGGACTATGTCTTATCCCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSVPPTSTQCKD*TEGTMSYPRCL
Trigger: CAGGCACCTGGGATAAGACATAGTCCCTTCTGTCAAGTCTTTACATTGGGTGGATGTGGGAGGGACAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGATGTTGTCAAGACTCATaGACCCAGAAGGCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRCCQDS*TQKAAN
Trigger: GTTTGCTGCCTTCTGGGTTCATGAGTCTTGACAACA...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGCCTCATTGCCATGTTaGGACACAGGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAASLPC*DTGCRL
Trigger: CAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGC...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGTCCAGGCAGATGCCCTaGGTCAATTTCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGSRQMP*VNFTSL
Trigger: CAGAGAAGTGAAATTGACTCAGGGCATCTGCCTGGA...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR TCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGCCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRQHVFLAISLQESRCKRPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCACCCAAGAACAGCCTCTaGGGTGTGTGCAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAPKNSL*GVCSGE
Trigger: TTCCCCACTGCACACACCTCAGAGGCTGTTCTTGGG...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TTCCCTACTGATTACCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAATCGGAAGAGTACAGGTaGGAGGCTCAGCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FPTDYHRLLLIILCSNPQSEEYR*EAQLQD
Trigger: GTCTTGGAGCTGAGCCTCTCACCTGTACTCTTCCGA...TTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGGTAATCAGTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GGGAGCCGAATGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGGGATGAGATGGAAGTaGTCTATTTATCTGGACTTA +
Preference number: 4 (lower is better)
Translates to: GSRMCKGQEFTCPSSRCRGMRWK*SIYLDL
Trigger: TAAGTCCAGATAAATAGATCACTTCCATCTCATCCC...CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACATTCGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCATAGCTCTGGTGGCTTaGAACATCTTGCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSIALVA*NILLSE
Trigger: TTCACTGAGCAAGATGTTGCAAGCCACCAGAGCTAT...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCCTGTGGGGCTCCAGCTaGGGCGATTCATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLLWGSS*GDSSGN
Trigger: ATTTCCTGATGAATCGCCGCAGCTGGAGCCCCACAG...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGATGACCATATGGGGGTaGAGAGCAAGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQMTIWG*RARKGL
Trigger: GAGCCCCTTCCTTGCTCTGCACCCCCATATGGTCAT...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATTTGTTTTGCATATTTTaGAGCAGTGATCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: PRHTFTQRRPESGSREPNLFCIF*SSDQHA
Trigger: AGCATGCTGATCACTGCTGCAAAATATGCAAAACAA...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGCTCCTCTTTAACTCCTaGTTGACCAAAGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGLLFNS*LTKGSV
Trigger: GACTGATCCTTTGGTCAAGCAGGAGTTAAAGAGGAG...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTACAGAGGTCTGTGACTaGACAGAAGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LQTLAFPRHTFTQRRPESTEVCD*TEEFVF
Trigger: AAACACAAACTCTTCTGTCCAGTCACAGACCTCTGT...AGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CCA 90 bp CCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCAAATTTCTGTTCTGTTaGCCAAGACCAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: PCSTPLERNQQQTRTWVTKFLFC*PRPAVD
Trigger: GTCTACTGCTGGTCTTGGCCAACAGAACAGAAATTT...GGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGAAGTCCACAGTGTCTTaGAGGAGAGATGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWKSTVS*RRDEGS
Trigger: ACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTT...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGAAGTCCACAGTGTCTTaGAGGAGAGATGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKKSTVS*RRDEGS
Trigger: ACTTCCCTCATCTCTCCTCCAAGACACTGTGGACTT...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGATTCACACTGCCACACTaGCTTCATGACATCCAACTG +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRFTLPH*LHDIQL
Trigger: CAGTTGGATGTCATGAAGCCAGTGTGGCAGTGTGAA...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp TTGTCCTTTCCCCTGTGTGGGATAATCTCTCCCAGCTaGGCATACAACCTGCTTCTCCACTTCATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LSFPLCGIISPS*AYNLLLHFIQV
Trigger: CACTTGAATGAAGTGGAGAAGCAGGTTGTATGCCAAGCTGGGAGAGATTATCCCACACAGGGGAAAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCTCAGGAAATAGCCAGTaGTGCCCAAGACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLSGNSQ*CPRQPA
Trigger: TGCTGGCTGTCTTGGGCATCACTGGCTATTTCCTGA...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATCATCTGTTGGGGGACTaGGGCAACAGCTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDHLLGD*GNSSTQ
Trigger: CTGGGTTGAGCTGTTGCCTCAGTCCCCCAACAGATG...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGAAATGCTCCAGAAGTaGAGTCCCAAACCTATCTTC +
Preference number: 4 (lower is better)
Translates to: DSANGRGGTWSSVELREQEMLQK*SPKPIF
Trigger: GAAGATAGGTTTGGGACTTCACTTCTGGAGCATTTC...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTATAAAGCAGATGATATaGCTTCTCTGCTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: RPWLSPVTRLPKEDQSLAIKQMI*LLCSKP
Trigger: GGGTTTTGAGCAGAGAAGTCATATCATCTGCTTTAT...AGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGATCTACTGGGAAGCCTaGACTTCTAACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQIYWEA*TSNLGQ
Trigger: CTGGCCCAGGTTAGAAGTTCAGGCTTCCCAGTAGAT...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAATTTGCTCCAGGCAGATaGCCTGAGTCAATTTCACTT +
Preference number: 4 (lower is better)
Translates to: DSANGRGGTWSSVELREQFAPGR*PESISL
Trigger: AAGTGAAATTGACTCAGGGCATCTGCCTGGAGCAAA...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR GCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATGCATCAGCATCAGCCTaGTCCTCCCCACACAGCACT +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDASASA*SSPHST
Trigger: AGTGCTGTGTGGGGAGGAGCAGGCTGATGCTGATGC...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACGTGTTGTCTTGCTTCAGGTCAGATTGGTaGTTTTTCATAAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPHLAESQFGISHHVLSCFRSDW*FFISWS
Trigger: ACTCCAACTTATGAAAAAGCACCAATCTGACCTGAA...GCAAGACAACACGTGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR GCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGACAGGAGTTTACCTaGCCCTCCTCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAGQEFT*PSSRCR
Trigger: CCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCC...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp ACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCTTACAAGAGAGCAGGTaGAAAAGGTTACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLAFPRHTFTQRRPESGSLQESR*KRLLWF
Trigger: AAACCAAAGTAACCTTTTGCACCTGCTCTCTTGTAA...GGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp GGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACATGGACACACTTTTTCTTATaGCTCCTGTTAACTAACTCT +
Preference number: 4 (lower is better)
Translates to: GSSQKTVQDSANGRGGTWTHFFL*LLLTNS
Trigger: AGAGTTAGTTAACAGGAGGCATAAGAAAAAGTGTGT...CCATGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCTTTGAAAATGTTCCCTaGGTAGGTAACTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSFENVP*VGNSGV
Trigger: TACCCCAGAGTTACCTACCCAGGGAACATTTTCAAA...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CCA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATAAATTTCTGTTCTGTTaGCCAAGACCAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDKFLFC*PRPAVD
Trigger: GTCTACTGCTGGTCTTGGCCAACAGAACAGAAATTT...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTCTGAATGGCCGTTTCTaGAGGTGGCCTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KCGINLPRRDEMEVIYLSLNGRF*RWPGRS
Trigger: GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAG...AGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGTGTTGTCTTGCTGAATaGCCGTTTCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQCCLAE*PFLEVA
Trigger: GGCCACCTCCAGAAACGGCCATTCAGCAAGACAACA...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGCCATCGATTGTTCCTaGGAGCTTCTCCAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQAIDCS*ELLQTL
Trigger: CAAGGTCTGGAGAAGCTCCCAGGAACAATCGATGGC...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGCCACGGTGGGAAAGTTaGATTTTTCCAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NRLNTEADKRISIRGLGAPRWES*IFPESR
Trigger: CCTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGG...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCCAGTTCCAGACAAGATaGAGTGGACACACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSQFQTR*SGHTFS
Trigger: AGAAAAAGTGTGTCCACTCCATCTTGTCTGGAACTG...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCAGTCCGGATGGCAGATaGCAGAGAAGGAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLSPDGR*QRRKCL
Trigger: CAGGCATTTCCTTCTCTGCCATCTGCCATCCGGACT...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR TCA 90 bp AGTTGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTCCAGCTGTGAAACCACCTGTTCATaGCCCAGTCTCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SWIFPESRQILQGKLSSCETTCS*PSLRSS
Trigger: AGAAGATCTGAGACTGGGTCATGAACAGGTGGTTTC...ACAGCTGGACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CACTGGAAATGGATGTTTCCTCTCCCCATGGAGGAGAATAGTTGGCAGACTTGGCCCAATGTAAAGACTTaGCAGAAGGGACTATGTCTT +
Preference number: 4 (lower is better)
Translates to: HWKWMFPLPMEENSWQTWPNVKT*QKGLCL
Trigger: AAGACATAGTCCCTTCTGTCAAGTCTTTACATTGGG...CCAAGTCTGCCAACTATTCTCCTCCATGGGGAGAGGAAACATCCATTTCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTTTTCACATTCATTCTTTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCGAGGTGGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: FFTFILSQVYSGVFQRLPEVGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCCACCTC...GGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAAAGAATGAATGTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTTGCTCTCTCGGACACTaGCCAGCCTTGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: KCGINLPRRDEMEVIYLSCSLGH*PALPHL
Trigger: TAGGTGGGGCAAGGCTGGGCAGTGTCCGAGAGAGCA...AGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTTCTGTGTGGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGGCTTGGCATACAACCTaGTTCTCCACTTCATTCAAG +
Preference number: 4 (lower is better)
Translates to: FLCGPRETRTELFVLKLGAWHTT*FSTSFK
Trigger: CTTGAATGAAGTGGAGAAGCAGGTTGTATGCCAAGC...CCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCCACACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAATTTGAAAATGTTCCCTaGGTAGGTAACTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: DSANGRGGTWSSVELREQFENVP*VGNSGV
Trigger: TACCCCAGAGTTACCTACCCAGGGAACATTTTCAAA...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CCA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAAGGCAACACGTTTTTCTaGCTATATCATTACAAGAGA +
Preference number: 4 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQEGNTFF*LYHYKR
Trigger: TCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCC...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp AGTTATATGAGCTTTGTGTACAAGAGAAATTGGACTAGAGGGTGGGGCAGCCAGGCACATGGAGCTCAGTaGAACTTAGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: SYMSFVYKRNWTRGWGSQAHGAQ*NLENKG
Trigger: TCCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGC...CTGGCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACACAAAGCTCATATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGGAGGAGGAAGCCATaGAGATCAGAGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAGRRKP*RSEDKA
Trigger: AGCCTTATCCTCTGATCTCCATGGCTTCCTCCTCCC...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTGGGCTATGACCATATaGGGGTGCAGAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRQHVFLAISLQESRCKRWAMTI*GCRARK
Trigger: CTTCCTTGCTCTGCACCCCCATATGGTCATAGCCCA...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGCTTCAGGTTGCTGACTaGGCCATCAGACCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRQHVFLAISLQESRCKRLQVAD*AIRPRN
Trigger: ATTCCTGGGTCTGATGGCCCAGTCAGCAACCTGAAG...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CCA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAATAATATACACTCAGTaGAAACCTCAGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRIIYTQ*KPQWPP
Trigger: AGGAGGCCACTGAGGTTTCCACTGAGTGTATATTAT...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367036.7
3UTR CAA 72 bp TATGTAGAGAGAAGAAGGCAGAATTGGGAGGGACTTTaGGACTCAAGGAATGACATGGCACCAGGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: YVERRRQNWEGL*DSRNDMAPGWY
Trigger: ATACCACCCTGGTGCCATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAATTCTGCCTTCTTCTCTCTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AGTTATATGAGCTTTGTGTACAAGAGAAATTGGACTAGAGGGTGGGGCAGCCAGGATTACAGAGGTCTGTaGCTGGACAGAAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SYMSFVYKRNWTRGWGSQDYRGL*LDRRVC
Trigger: ACAAACTCTTCTGTCCAGTCACAGACCTCTGTAATC...CTGGCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACACAAAGCTCATATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TATACCATAGCACTTACACTCAATGCATATTGTTCTGTCATCTGTCCCTCCCACTGGTCCTGCCTACTTTaGTCCAGAGGGAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: YTIALTLNAYCSVICPSHWSCLL*SRGRKR
Trigger: CCTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCA...GTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGAGGGGTGGAGGAGTGCTaGAGGGAAAGGTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRGVEEC*RERSGF
Trigger: AAAGCCAGACCTTTCCCTTCAGCACTCCTCCACCCC...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTTTTCACATTCATTCTTTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCCTTTGGAATTCTGGGTaGTTGGGCAAGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: FFTFILSQVYSGVFQRLPLWNSG*LGKPPP
Trigger: GGGAGGTGGCTTGCCCAATCACCCAGAATTCCAAAG...GGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAAAGAATGAATGTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGGGTTTCCAAGTGGTCTCTaGGGTCAAAACAATTTGAAT +
Preference number: 4 (lower is better)
Translates to: SANGRGGTWSSVELREQGFPSGL*GQNNLN
Trigger: ATTCAAATTGTTTTGACCTCAGAGACCACTTGGAAA...CCCTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATGTCCTGTGTGAGTGCTaGAAGGCCATCGATTGTTCC +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDVLCEC*KAIDCS
Trigger: GGAACAATCGATGGCCTTGCAGCACTCACACAGGAC...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTTTTCACATTCATTCTTTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCGGAGGGTGTCACTCTTaGATGCAGACACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: FFTFILSQVYSGVFQRLPGGCHS*MQTHPA
Trigger: AGCTGGGTGTGTCTGCATGCAAGAGTGACACCCTCC...GGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAAAGAATGAATGTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGACCCATCCCACCTCTCTaGCCTGAAGGTGTCAACAGC +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRPIPPL*PEGVNS
Trigger: GCTGTTGACACCTTCAGGGCAGAGAGGTGGGATGGG...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp AGTTGGATTTTTCCAGAAAGCAGGCAAATTCTTCAGGGCAAGCTGTCCAGCTGTTTCTACCACTGGAAATaGATGTTTCCTCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: SWIFPESRQILQGKLSSCFYHWK*MFPLPM
Trigger: CATGGGGAGAGGAAACATCCATTTCCAGTGGTAGAA...ACAGCTGGACAGCTTGCCCTGAAGAATTTGCCTGCTTTCTGGAAAAATCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAACATTTGGAAGCTCCCTaGTACATTCGGGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WFKATRFSGYIITREQVQHLEAP*YIRVCL
Trigger: AAGGCAGACCCGAATGTACCAGGGAGCTTCCAAATG...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACCCAGACAAGATGGAGTaGACACACTTTTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDPDKME*THFFLC
Trigger: GCATAAGAAAAAGTGTGTCCACTCCATCTTGTCTGG...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp ACTCTCTTCTCTGGAAATTTCTATTTCCAACCGTCATaGAAACCAGGATCCCTGCTCAACCCCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TLFSGNFYFQPS*KPGSLLNPSGK
Trigger: CTTTCCAGAGGGGTTGAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATTCCAGGCAGATGCCCTaGGTCAATTTCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDSRQMP*VNFTSL
Trigger: CAGAGAAGTGAAATTGACTCAGGGCATCTGCCTGGA...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGCAACATCTTGCTCAGTaGAATCTAGGATCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRQHVFLAISLQESRCKRQHLAQ*NLGSPA
Trigger: AGCTGGGGATCCTAGATTTCACTGAGCAAGATGTTG...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCTCTTTAACTCCTGCTTaGCCAAAGGATCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLSLTPA*PKDQSR
Trigger: TCTGGACTGATCCTTTGGTCAAGCAGGAGTTAAAGA...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGATCACATGCTTTGCTTaGGCCTTAAAAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: NRLNTEADKRISIRGLGAITCFA*ALKESL
Trigger: GAGTGATTCTTTTAAGGCTCAAGCAAAGCATGTGAT...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATGCCTGGCTAACACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDAWLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGC...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGTTCAGGTCAGATTGGTaGTTTTTCATAAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKFRSDW*FFISWS
Trigger: ACTCCAACTTATGAAAAAGCACCAATCTGACCTGAA...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR GCA 90 bp TATACCATAGCACTTACACTCAATGCATATTGTTCTGTCATCTGTCCCTCCCACAGCTGGAAAGGGTCCTaGCCACATCTAGATACAAAG +
Preference number: 4 (lower is better)
Translates to: YTIALTLNAYCSVICPSHSWKGS*PHLDTK
Trigger: CTTTGTATCTAGATGTGGGCAGGACCCTTTCCAGCT...GTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGGATCCCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGAAGAATCACATGCTTTaGTTGAGCCTTAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: RIPAQPLWKEINSKQGPGKNHML*LSLKRI
Trigger: GATTCTTTTAAGGCTCAAGCAAAGCATGTGATTCTT...CCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGGGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
3UTR CAA 72 bp AGCTTCCTATACCATAGCACTTACACTCAATGCATATaGTTCTGTCATCTGTCCCTCCCACATCCACCCAAT +
Preference number: 4 (lower is better)
Translates to: SFLYHSTYTQCI*FCHLSLPHPPN
Trigger: ATTGGGTGGATGTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATAGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATATTTCCAACCGTCATTaGAACCAGGATCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDISNRH*NQDPCS
Trigger: TGAGCAGGGATCCTGGTTTCAATGACGGTTGGAAAT...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTTATTTCCTAGGAATCTaGACCCTGAACCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: QHVFLAISLQESRCKRLLYFLGI*TLNPPL
Trigger: GAGGGGTGGGTTCAGGGTTCAGATTCCTAGGAAATA...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCATTTAGTGGGAGATGTTaGAAGGCTAGTGCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAFSGRC*KASASG
Trigger: ACCACTAGCACTAGCCTTGCAACATCTCCCACTAAA...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR GCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCGAAGCAGCATCCTGTTaGACAAAATCGATGACCTAT +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLEAASC*TKSMTY
Trigger: ATAGGTCATCGATTTTGTGCAACAGGATGCTGCTTC...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACATTCAAGTGAAGCTGTaGTCTCCACTGTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDIQVKL*SPLLFF
Trigger: GAAAAATAACAGTGGAGAGCACAGCTTCACTTGAAT...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGAGCACTTACACTCAATaGATATTGTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: NRLNTEADKRISIRGLGASTYTQ*ILFCHL
Trigger: CAGATGACAGAACAATATGCATTGAGTGTAAGTGCT...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATGTTTGTCCTAAAACTTaGGAGGCCTGTTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: FTSIQWSVSEATHHITTDVCPKT*EACSRL
Trigger: GAGCCTAGAACAGGCCTCCCAAGTTTTAGGACAAAC...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGCCTGCTCAACCCCTCTaGAAAGAAATCAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SRQHVFLAISLQESRCKRPAQPL*KEINSK
Trigger: TTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGACGCTCAGGCCCACGGTaGGAAAGTTGGATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRRSGPR*ESWIFP
Trigger: TGGAAAAATCCAACTTTCCCACCGTGGGCCTGAGCG...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGTTCACAAGTATACAGTaGAGTGTTTCAGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: GKWFKATRFSGYIITREQFTSIQ*SVSEAT
Trigger: GGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TGCAGACACACCCAGCTAAGACAGAGTCACATAACAGATGTGTTTCAGTATCACAAGAGTAGGATGATATaGTGGAAGGGAAAACTACAG +
Preference number: 4 (lower is better)
Translates to: CRHTQLRQSHITDVFQYHKSRMI*WKGKLQ
Trigger: CTGTAGTTTTCCCTTCCATCATATCATCCTACTCTT...GTGATACTGAAACACATCTGTTATGTGACTCTGTCTTAGCTGGGTGTGTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCATGGCTTGCAACATCTTaGTCAGTGAAATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAWLATS*SVKSRI
Trigger: GATCCTAGATTTCACTGAGCAAGATGTTGCAAGCCA...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGAGTGTACAAGAGAAATTaGACTAGAGGGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRVYKRN*TRGWGS
Trigger: GCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACAC...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR TCA 90 bp TGCAGACACACCCAGCTAAGACAGAGTCACATAACAGATGTGTTTCAGTATCACCAATTGCAGCATGCTTaGAACAAAAGAACAGAAACA +
Preference number: 4 (lower is better)
Translates to: CRHTQLRQSHITDVFQYHQLQHA*NKRTET
Trigger: TGTTTCTGTTCTTTTGTTTCAAGCATGCTGCAATTG...GTGATACTGAAACACATCTGTTATGTGACTCTGTCTTAGCTGGGTGTGTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGACCTGATAATAAAGGGTaGACAGGACATTGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRPDNKG*TGHCPF
Trigger: GAAGGGGCAATGTCCTGTGCACCCTTTATTATCAGG...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR GCA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCAGGAGTCTCAAAAAGTaGATTGCTCAAACTGAAATG +
Preference number: 4 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLRSLKK*IAQTEM
Trigger: CATTTCAGTTTGAGCAATGCACTTTTTGAGACTCCT...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CCA 90 bp TTTTTCACATTCATTCTTTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCCCTGCTCAACCCCTCTaGAAAGAAATCAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: FFTFILSQVYSGVFQRLPPAQPL*KEINSK
Trigger: TTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG...GGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAAAGAATGAATGTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp TATACCATAGCACTTACACTCAATGCATATTGTTCTGTCATCTGTCCCTCCCACATGGAAACTCTTCTGTaGCTCCTCTTCTATTGGATA +
Preference number: 4 (lower is better)
Translates to: YTIALTLNAYCSVICPSHMETLL*LLFYWI
Trigger: TATCCAATAGAAGAGGAGCCACAGAAGAGTTTCCAT...GTGGGAGGGACAGATGACAGAACAATATGCATTGAGTGTAAGTGCTATGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CCA 90 bp AGGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCATTTTTCAGGTCAGATTaGTGCTTTTTCATAAGTTGG +
Preference number: 4 (lower is better)
Translates to: REVVQGNTFFWLYHYKRAFFRSD*CFFISW
Trigger: CCAACTTATGAAAAAGCACCAATCTGACCTGAAAAA...TGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR TCA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGAAAACACATTGTCCTTTaGCAGTACCTTATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRKHIVL*QYLIFP
Trigger: GGGAAAGATAAGGTACTGTCAAAGGACAATGTGTTT...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS CCA 90 bp GCAGCAAACTCAGCAAGCAAAGCGCGGTCCAGCCCCGCGGCATCCTaGGCCCTGCGCGCGCGCCCCTGCGGACCAGCATCCTTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: AANSASKARSSPAAS*ALRARPCGPASFPR
Trigger: GCGCGGGAAGGATGCTGGTCCGCAGGGGCGCGCGCGCAGGGCCCAGGATGCCGCGGGGCTGGACCGCGCTTTGCTTGCTGAGTTTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS CCA 90 bp CGGACCAGCATCCTTCCCGCGCGGCTCCTAGAGAGACGCACCGAGTaGAAGACACTACTCGGCTTGGCCAGGACGCGCTCTTCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RTSILPARLLERRTE*KTLLGLARTRSSRP
Trigger: GGGGCGGGAAGAGCGCGTCCTGGCCAAGCCGAGTAGTGTCTTCCACTCGGTGCGTCTCTCTAGGAGCCGCGCGGGAAGGATGCTGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS CCA 90 bp AGGCAGCGCCTCTCCTTGGCTGCTACTAACTTGAGCTCCCCTGGTTaGTCCCAAAGGCGGAGGGCGTTAGGAGGGAGGCTGGGTTGCCGC +
Preference number: 5 (lower is better)
Translates to: RQRLSLAATNLSSPG*SQRRRALGGRLGCR
Trigger: GCGGCAACCCAGCCTCCCTCCTAACGCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAAGGAGAGGCGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSGHCPA*PHLAES
Trigger: TGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCC...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp GGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGTGCAGTGGGGAAGGGTaGGGCGTAAGAGATGTCACC +
Preference number: 5 (lower is better)
Translates to: GGSTWSDAERGALSDTAQCSGEG*GVRDVT
Trigger: GGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA...CTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCAGGCAGCGCCTCTCCTaGGCTGCTACTAACTTGAGC +
Preference number: 5 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSRQRLS*AATNLS
Trigger: GCTCAAGTTAGTAGCAGCCAAGGAGAGGCGCTGCCT...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCAAGACACTACTCGGCTaGGCCAGGACGCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CHLQHGGSTWSDAERGALKTLLG*ARTRSS
Trigger: GGAAGAGCGCGTCCTGGCCAAGCCGAGTAGTGTCTT...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp CCACCACGTGTTGTCTTGCTGAATGGCCGTTTCTGGAGGTGGCCTGGCCGGTCCGCTGGAGGTCTTATTTaGCTCCAGGCAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: PPRVVLLNGRFWRWPGRSAGGLI*LQADAL
Trigger: CAGGGCATCTGCCTGGAGCAAAATAAGACCTCCAGC...GGACCGGCCAGGCCACCTCCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCCCACCACGTGTTGTCTaGCTGAATGGCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: STWSDAERGALSDTAQPCPPRVV*LNGRFW
Trigger: CCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCTGGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: PGSFSRPWLSPVTRLPKEGHCPA*PHLAES
Trigger: TGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCC...TTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATAGCCCCCTCCCTGAGTaGGCTGCCAGGTCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: PRHTFTQRRPESGSREPNSPLPE*AARSLE
Trigger: TTCTAGAGACCTGGCAGCCAACTCAGGGAGGGGGCT...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGCTGCTGTCTTAATCTaGAGGGTGGAAACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: CHLQHGGSTWSDAERGALAAVLI*RVETSP
Trigger: GGGGCTGGTTTCCACCCTCAAGATTAAGACAGCAGC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS GCA 90 bp GCCAGTGATGCCCAAGACAGCCAGCAGGGCTCCCGAGGTGACCAGTaGAATCAGGGTCTTTTGGGAATAGCTCTGGTGGCTTGCAACATC +
Preference number: 5 (lower is better)
Translates to: ASDAQDSQQGSRGDQ*NQGLLGIALVACNI
Trigger: GATGTTGCAAGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGCTGGCTGTCTTGGGCATCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
ENST00000485761.1
CDS-3UTR CAA 90 bp AGAGATGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCCACCACGTGTTGTCTaGCTGAATGGCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RDVTSSMGVARGQMQRGVPPRVV*LNGRFW
Trigger: CCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG...CACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCATGGTCCTGCCTACTTaGATCCAGAGGGAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSMVLPT*IQREKK
Trigger: CTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCAT...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TGTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCGGGGTAGCAGTACCGTaGTTGTCAAGACTCATGAAC +
Preference number: 5 (lower is better)
Translates to: CHLQHGGSTWSDAERGALGVAVP*LSRLMN
Trigger: GTTCATGAGTCTTGACAACAACGGTACTGCTACCCC...GAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTGCAATCAGGGTCTTTaGGGAATAGCTCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSCNQGL*GIALVA
Trigger: AGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCA...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCTGGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAATGCAGTGGGGAAGGGTaGGGCGTAAGAGATGTCACC +
Preference number: 5 (lower is better)
Translates to: PGSFSRPWLSPVTRLPKECSGEG*GVRDVT
Trigger: GGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA...TTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCCAGGGAGCCGAATCCACTGTCGACACACTaGGGAGTGTTTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PRHTFTQRRPESGSREPNPLSTH*GVFPGA
Trigger: AGCTCCAGGAAACACTCCCAAGTGTGTCGACAGTGG...ATTCGGCTCCCTGGAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCTACAGATTCAGGACTTaGGAATTCTGGGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSYRFRT*EFWVIG
Trigger: CCCAATCACCCAGAATTCCAAAGTCCTGAATCTGTA...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGATAATCTCTCCCAGCTaGGCATACAACCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGIISPS*AYNLLL
Trigger: GAGAAGCAGGTTGTATGCCAAGCTGGGAGAGATTAT...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTGTAGCAGTACCGTTGTaGTCAAGACTCATGAACCCA +
Preference number: 5 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSVAVPL*SRLMNP
Trigger: TGGGTTCATGAGTCTTGACAACAACGGTACTGCTAC...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp CCTGCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCGGCCTCATTGCCATGTaGAGACACAGGGTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PAQPLWKEINSKQGPGSPGLIAM*RHRVQA
Trigger: AGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCC...GGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTGATGCCTGAACATTaGATTTCTGCCTTGATGTCA +
Preference number: 5 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSLMPEH*ISALMS
Trigger: TGACATCAAGGCAGAAATCAAATGTTCAGGCATCAG...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp AGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCTTGCGAAATTTCTGTTCTGTaGGCCAAGACCAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: STWSDAERGALSDTAQPCEISVL*AKTSSR
Trigger: TCTACTGCTGGTCTTGGCCAACAGAACAGAAATTTC...GCAAGGCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp GGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTCGGACACTGCCCAGCCCGCAAGAAGGATCCTaGTTTCTAAAATTCCAACAG +
Preference number: 5 (lower is better)
Translates to: GVARGQMQRGVLSRTLPSPQEGS*FLKFQQ
Trigger: CTGTTGGAATTTTAGAAACAAGGATCCTTCTTGCGG...GCTGGGCAGTGTCCGAGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CAA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCTGCAGTGGGGAAGGGTaGGGCGTAAGAGATGTCACC +
Preference number: 5 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSCSGEG*GVRDVT
Trigger: GGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCAATGGTCCTGCCTACTTaGATCCAGAGGGAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAMVLPT*IQREKK
Trigger: CTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCAT...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TGCAGTGGGGAAGGGTTGGGCGTAAGAGATGTCACCTCCAGCATGGGGGTAGCATATTTCCAACCGTCATaGAAACCAGGATCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: CSGEGLGVRDVTSSMGVAYFQPS*KPGSLL
Trigger: GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATA...TGCTACCCCCATGCTGGAGGTGACATCTCTTACGCCCAACCCTTCCCCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCGAACCTCATGGCCTCCTGTGATCTTTGTCCTGGGGCTCCTCCAGGACCTGCTAATTGGGAGGGACTTTaGGACTCAAGGAATGACATG +
Preference number: 5 (lower is better)
Translates to: PNLMASCDLCPGAPPGPANWEGL*DSRNDM
Trigger: CATGTCATTCCTTGAGTCCAAAAGTCCCTCCCAATT...AGCAGGTCCTGGAGGAGCCCCAGGACAAAGATCACAGGAGGCCATGAGGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAATTGGCTGCTACTAACTaGAGCTCCCCTGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQELAATN*SSPGWS
Trigger: GGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAA...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACACCTCCCTTTTTAGTCTaGGCAAGGCAGCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTPPFLV*ARQRLS
Trigger: GGAGAGGCGCTGCCTTGCCAAGACTAAAAAGGGAGG...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp GTCACCTCCAGCATGGGGGTAGCACGTGGTCAGATGCAGAGAGGGGTGCTCTCTTGTCTCGTTGAAGCATaGCCCATGTACACATATGCA +
Preference number: 5 (lower is better)
Translates to: VTSSMGVARGQMQRGVLSCLVEA*PMYTYA
Trigger: TGCATATGTGTACATGGGCAATGCTTCAACGAGACA...AGAGAGCACCCCTCTCTGCATCTGACCACGTGCTACCCCCATGCTGGAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CAA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCGGACACTGCCCAGCCTaGCCCCACCTAGCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLGHCPA*PHLAES
Trigger: TGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGTCC...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CCTGGCCTCCACCGTTTTCCGTGTAATAAGGGTCTTCGCCCTAGACAGTGTATACTGCAAGGCCATCGATaGTTCCTGGGAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PGLHRFPCNKGLRPRQCILQGHR*FLGASP
Trigger: TGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAG...TATACACTGTCTAGGGCGAAGACCCTTATTACACGGAAAACGGTGGAGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACACCCACGGTGGGAAAGTaGGATTTTTCCAGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTPTVGK*DFSRKQ
Trigger: CTGCTTTCTGGAAAAATCCAACTTTCCCACCGTGGG...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGCTTGAGCTCCCCTGGTaGGTCCCAAAGGCGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GKWFKATRFSGYIITREQLELPW*VPKAEG
Trigger: GCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAAG...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACATCTGGAGTTGAAACGTaGGCTGGGGTGGTGAACACT +
Preference number: 5 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTSGVET*AGVVNT
Trigger: AGTGTTCACCACCCCAGCCAACGTTTCAACTCCAGA...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp CCCTCCTCAAGGTGTAGGGCCCCAAGAACAGCCTCTGAGGTGTGTGCAGTGGGGAATCACATGCTTTGCTaGAGCCTTAAAAGAATCACT +
Preference number: 5 (lower is better)
Translates to: PSSRCRAPRTASEVCAVGNHMLC*SLKRIT
Trigger: AGTGATTCTTTTAAGGCTCAAGCAAAGCATGTGATT...CCCCACTGCACACACCTCAGAGGCTGTTCTTGGGGCCCTACACCTTGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATGGGGTAGCAGTACCGTaGTTGTCAAGACTCATGAAC +
Preference number: 5 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDGVAVP*LSRLMN
Trigger: GTTCATGAGTCTTGACAACAACGGTACTGCTACCCC...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAGAAATTTCTGTTCTGTaGGCCAAGACCAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTEISVL*AKTSSR
Trigger: TCTACTGCTGGTCTTGGCCAACAGAACAGAAATTTC...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGCTGCAAGGCCATCGATaGTTCCTGGGAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: NRLNTEADKRISIRGLGALQGHR*FLGASP
Trigger: TGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAG...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGAGGGTGCACAGGACATaGCCCCTTCCCTTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKRVHRT*PLPFVL
Trigger: CAAAACAAAGGGAAGGGGCAATGTCCTGTGCACCCT...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGACAATCACCCTCACTTaGCTCCTGGGACAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKTITLT*LLGQGF
Trigger: GAAGCCTTGTCCCAGGAGCAAAGTGAGGGTGATTGT...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGCCCCAGAGAGACTAGAACTGAGCTGTTTGTCCTAAAACTTGGGAGGCCTGTTGTAGCAGTACCGTTGTaGTCAAGACTCATGAACCCA +
Preference number: 5 (lower is better)
Translates to: GPRETRTELFVLKLGRPVVAVPL*SRLMNP
Trigger: TGGGTTCATGAGTCTTGACAACAACGGTACTGCTAC...AACAGGCCTCCCAAGTTTTAGGACAAACAGCTCAGTTCTAGTCTCTCTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACTCTGGAGTTGAAACGTaGGCTGGGGTGGTGAACACT +
Preference number: 5 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDSGVET*AGVVNT
Trigger: AGTGTTCACCACCCCAGCCAACGTTTCAACTCCAGA...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp CCTGGGAGCTTCTCCAGACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAACTGATGCCTGAACATTaGATTTCTGCCTTGATGTCA +
Preference number: 5 (lower is better)
Translates to: PGSFSRPWLSPVTRLPKELMPEH*ISALMS
Trigger: TGACATCAAGGCAGAAATCAAATGTTCAGGCATCAG...TTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTCTGGAGAAGCTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp AGTTATATGAGCTTTGTGTACAAGAGAAATTGGACTAGAGGGTGGGGCAGCCAGGCTGGAGGTCTTATTTaGCTCCAGGCAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: SYMSFVYKRNWTRGWGSQAGGLI*LQADAL
Trigger: CAGGGCATCTGCCTGGAGCAAAATAAGACCTCCAGC...CTGGCTGCCCCACCCTCTAGTCCAATTTCTCTTGTACACAAAGCTCATATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp ACACTGCCCAGCCTTGCCCCACCTAGCCGAGTCACAATTCGGTATCAGCCACCACTTTTTCAGGTCAGATaGGTGCTTTTTCATAAGTTG +
Preference number: 5 (lower is better)
Translates to: TLPSLAPPSRVTIRYQPPLFQVR*VLFHKL
Trigger: CAACTTATGAAAAAGCACCAATCTGACCTGAAAAAG...TGGTGGCTGATACCGAATTGTGACTCGGCTAGGTGGGGCAAGGCTGGGCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS-3UTR CAA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGATGCAATCAGGGTCTTTaGGGAATAGCTCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRCNQGL*GIALVA
Trigger: AGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCA...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp AACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGTGCAATCAGGGTCTTTaGGGAATAGCTCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: NPSGKKSTANKDLGHPQKCNQGL*GIALVA
Trigger: AGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCA...CTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TGTGTAAAGGACAGGAGTTTACCTGCCCCTCCTCAAGGTGTAGGGCCCCAAGAAAGAAGCAGCATCCTGTaGCACAAAATCGATGACCTA +
Preference number: 5 (lower is better)
Translates to: CVKDRSLPAPPQGVGPQERSSIL*HKIDDL
Trigger: TAGGTCATCGATTTTGTGCAACAGGATGCTGCTTCT...TTCTTGGGGCCCTACACCTTGAGGAGGGGCAGGTAAACTCCTGTCCTTTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp CCATCGTCTTTTGCTCATCATCCTTTGCTCCAACCCTCAAGGCAGCCATCGCCTGAGTGTAAGAGGGCTTaGAGAATAGCTGGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: PSSFAHHPLLQPSRQPSPECKRA*RIAGVE
Trigger: TTCTACACCAGCTATTCTCAAAGCCCTCTTACACTC...AGGCGATGGCTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAAAGACGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS TCA 90 bp TTGACTGTCGTTTCTGTGATGTTTGTTGTGGCCTCATTGCCATGTTaGGACACAGGGTGCAGGCTGGTACTTCCAAGGGTACTAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LTVVSVMFVVASLPC*DTGCRLVLPRVLGV
Trigger: AACACCTAGTACCCTTGGAAGTACCAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCCACAACAAACATCACAGAAACGACAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACACATTTGATTTCTGCCTaGATGTCACTTAGGATAGGA +
Preference number: 5 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTHLISA*MSLRIG
Trigger: TCCTATCCTAAGTGACATCAAGGCAGAAATCAAATG...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp GCTCAACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAATTTCTGTTCTGTaGGCCAAGACCAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: AQPLWKEINSKQGPGSPTEISVL*AKTSSR
Trigger: TCTACTGCTGGTCTTGGCCAACAGAACAGAAATTTC...TGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CTCTTCTCTGGAAATTTCTATTTCCAACCGTCATTGAAACCAGGATCCCTGCTCCTGCAAGGCCATCGATaGTTCCTGGGAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LFSGNFYFQPSLKPGSLLLQGHR*FLGASP
Trigger: TGGAGAAGCTCCCAGGAACAATCGATGGCCTTGCAG...GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATAGAAATTTCCAGAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp AACAGATTGAATACAGAAGCAGATAAAAGAATCAGCATTCGGGGGCTGGGCGCGCATACCACCCTCCATTaGGAAGCTCCCTGGTACATT +
Preference number: 5 (lower is better)
Translates to: NRLNTEADKRISIRGLGAHTTLH*EAPWYI
Trigger: AATGTACCAGGGAGCTTCCAAATGGAGGGTGGTATG...CGCGCCCAGCCCCCGAATGCTGATTCTTTTATCTGCTTCTGTATTCAATCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGCAGACACACCCAGCTAAGACAGAGTCACATAACAGATGTGTTTCAGTATCACCATAGGGCTTTGCACTaGTCCTTTCCCCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: CRHTQLRQSHITDVFQYHHRALH*SFPLCG
Trigger: CCCACACAGGGGAAAGGACAAGTGCAAAGCCCTATG...GTGATACTGAAACACATCTGTTATGTGACTCTGTCTTAGCTGGGTGTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS TCA 90 bp AACTCCGCACAGCTGGAGGTCTTATTTTGCTCCAGGCAGATGCCCTaGGTCAATTTCACTTCTCTGATGCCTGAACATTTGATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: NSAQLEVLFCSRQMP*VNFTSLMPEHLISA
Trigger: GGCAGAAATCAAATGTTCAGGCATCAGAGAAGTGAAATTGACTCAGGGCATCTGCCTGGAGCAAAATAAGACCTCCAGCTGTGCGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000485761.1
CDS-3UTR CAA 90 bp CTAGGCTCCAGCCAGAAAACTGTGCAGGACTCTGCAAATGGTAGAGGGGGCACAAGGTGTTGTAGTTTCTaGGTAGGATACATTTGTAGA +
Preference number: 5 (lower is better)
Translates to: LGSSQKTVQDSANGRGGTRCCSF*VGYICR
Trigger: TCTACAAATGTATCCTACCAAGAAACTACAACACCT...TGTGCCCCCTCTACCATTTGCAGAGTCCTGCACAGTTTTCTGGCTGGAGCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATGGCCTCATTGCCATGTaGAGACACAGGGTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: FTSIQWSVSEATHHITTDGLIAM*RHRVQA
Trigger: AGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCC...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp ATCCAGCCTCAGAGGAAGAGGATTTTTCGGAAGAGTACAGGTGAGAGGCTCAGCACTGGACAGAAGAGTTaGTGTTTCCATAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: IQPQRKRIFRKSTGERLSTGQKS*CFHKLR
Trigger: CCTCAGTTTATGGAAACACAAACTCTTCTGTCCAGT...GCTGAGCCTCTCACCTGTACTCTTCCGAAAAATCCTCTTCCTCTGAGGCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp GACCTTGGCTTTCCCCCGTCACACGTTTACCCAAAGAAGACCAGAGTCTGGCTCGTGCTTTTTCATAAGTaGGAGTTTGCTGGAAATTTC +
Preference number: 5 (lower is better)
Translates to: DLGFPPSHVYPKKTRVWLVLFHK*EFAGNF
Trigger: GAAATTTCCAGCAAACTCCAACTTATGAAAAAGCAC...GAGCCAGACTCTGGTCTTCTTTGGGTAAACGTGTGACGGGGGAAAGCCAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TTCGATGGGGGCTTTAGGAAGAGAAGCAGCATCCTGTTGCACAAAATCGATGACATGGTCCTGCCTACTTaGATCCAGAGGGAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: FDGGFRKRSSILLHKIDDMVLPT*IQREKK
Trigger: CTTTTTCTCCCTCTGGATCAAAGTAGGCAGGACCAT...GTCATCGATTTTGTGCAACAGGATGCTGCTTCTCTTCCTAAAGCCCCCATCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAGGAGGTGCATCCAAGTaGCCTTTTCCTCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: WFKATRFSGYIITREQVQGGASK*PFPLLP
Trigger: TGGGAGGAGAGGAAAAGGCAACTTGGATGCACCTCC...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp ACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGACTGGACAGAAGAGTTaGTGTTTCCATAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: TLQMVEGAHGAQWNLENKTGQKS*CFHKLR
Trigger: CCTCAGTTTATGGAAACACAAACTCTTCTGTCCAGT...CTTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGAGAATCAACCTTTGTTaGGCCCCAACTGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SRQHVFLAISLQESRCKRRINLC*APTASA
Trigger: GGCAGAGGCAGTTGGGGCCAAACAAAGGTTGATTCT...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS TCA 90 bp TCAGAATTTATTCCAGCAGCCTCCAATCAGAGTGTCCTCCTCCCCTaGACAGGAAAGGAATTGAAACTAAGACTTTCTCTTCAGTCCGGA +
Preference number: 5 (lower is better)
Translates to: SEFIPAASNQSVLLP*TGKELKLRLSLQSG
Trigger: TCCGGACTGAAGAGAAAGTCTTAGTTTCAATTCCTTTCCTGTTCAGGGGAGGAGGACACTCTGATTGGAGGCTGCTGGAATAAATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS GCA 90 bp CTCAGTGGCCTCCTCCCTCTTTCTACCCAAAGGAGTCTCAAAAAGTaGATTGCTCAAACTGAAATGGCATTTTTGTCTCGTCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: LSGLLPLSTQRSLKK*IAQTEMAFLSRLPS
Trigger: AGATGGAAGACGAGACAAAAATGCCATTTCAGTTTGAGCAATGCACTTTTTGAGACTCCTTTGGGTAGAAAGAGGGAGGAGGCCACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CAA 90 bp GAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAGGCAGCTGGTGATCTTTTTCAGGTCAGATaGGTGCTTTTTCATAAGTTG +
Preference number: 5 (lower is better)
Translates to: EINSKQGPGSPTEEAAGDLFQVR*VLFHKL
Trigger: CAACTTATGAAAAAGCACCAATCTGACCTGAAAAAG...ATCACCAGCTGCCTCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGTATTTCCAACCGTCATaGAAACCAGGATCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GKWFKATRFSGYIITREQYFQPS*KPGSLL
Trigger: GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATA...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp AAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTTGGAGGGTGTCACTCTaGCATGCAGACACACCCAGC +
Preference number: 5 (lower is better)
Translates to: KCGINLPRRDEMEVIYLSWRVSL*HADTPS
Trigger: GCTGGGTGTGTCTGCATGCAAGAGTGACACCCTCCA...AGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTGGAAGAATCAACCTTaGTTTGGCCCCAACTGCCTC +
Preference number: 5 (lower is better)
Translates to: SRQHVFLAISLQESRCKRWKNQP*FGPNCL
Trigger: GAGGCAGTTGGGGCCAAACAAAGGTTGATTCTTCCA...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTGAGATGCATTGCAGGTaGCTAGGCCTGAAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QHVFLAISLQESRCKRLLEMHCR*LGLKLE
Trigger: CTCCAGCTTCAGGCCTAGCAACCTGCAATGCATCTC...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GACTCTGCAAATGGTAGAGGGGGCACATGGAGCTCAGTGGAACTTAGAGAACAAGTGCTTTTTCATAAGTaGGAGTTTGCTGGAAATTTC +
Preference number: 5 (lower is better)
Translates to: DSANGRGGTWSSVELREQVLFHK*EFAGNF
Trigger: GAAATTTCCAGCAAACTCCAACTTATGAAAAAGCAC...TTGTTCTCTAAGTTCCACTGAGCTCCATGTGCCCCCTCTACCATTTGCAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGACCACCACGTGTTGTCTaGCTGAATGGCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRPPRVV*LNGRFW
Trigger: CCAGAAACGGCCATTCAGCAAGACAACACGTGGTGG...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp ACCCCTCTGGAAAGAAATCAACAGCAAACAAGGACCTGGGTCACCCACAGAAGAATACCAGAAAACACATaGTCCTTTGACAGTACCTTA +
Preference number: 5 (lower is better)
Translates to: TPLERNQQQTRTWVTHRRIPENT*SFDSTL
Trigger: TAAGGTACTGTCAAAGGACAATGTGTTTTCTGGTAT...TCTTCTGTGGGTGACCCAGGTCCTTGTTTGCTGTTGATTTCTTTCCAGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGGCTTGTAATTTCCTCTCCTCTCTCTTATATTCGACTTGAACTTCCAGTTCCAGAGAAGAAGGCAGAATaGGGAGGGACTTTTGGACTC +
Preference number: 5 (lower is better)
Translates to: WLVISSPLSYIRLELPVPEKKAE*GGTFGL
Trigger: GAGTCCAAAAGTCCCTCCCAATTCTGCCTTCTTCTC...TGGAACTGGAAGTTCAAGTCGAATATAAGAGAGAGGAGAGGAAATTACAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGGACCTATTACTGGTTTaGTGTGAAGAGGAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SRQHVFLAISLQESRCKRDLLLV*CEEEVW
Trigger: CCACACTTCCTCTTCACACAAAACCAGTAATAGGTC...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGTACACTCAATGCATATaGTTCTGTCATCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GKWFKATRFSGYIITREQYTQCI*FCHLSL
Trigger: GAGGGACAGATGACAGAACAATATGCATTGAGTGTA...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGATCAGACCCAGGAATTaGGACTCAGAAGAAAAACTC +
Preference number: 5 (lower is better)
Translates to: GKWFKATRFSGYIITREQIRPRN*DSEEKL
Trigger: GAGTTTTTCTTCTGAGTCCAAATTCCTGGGTCTGAT...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS-3UTR CAA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGGAGGTAGATGTGAATTaGACTGTCGTTTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SRQHVFLAISLQESRCKREVDVN*TVVSVM
Trigger: CATCACAGAAACGACAGTCAAATTCACATCTACCTC...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS-3UTR CAA 90 bp CAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGTTACTTTATTTCCAACCGTCATaGAAACCAGGATCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: QHVFLAISLQESRCKRLLYFQPS*KPGSLL
Trigger: GAGCAGGGATCCTGGTTTCAATGACGGTTGGAAATA...AAGTAACCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGATTTGCTCATCATCCTTaGCTCCAACCCTCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLRFAHHP*LQPSRQ
Trigger: CTGCCTTGAGGGTTGGAGCAAAGGATGATGAGCAAA...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp GGGAAGTGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCTTTTTCATAAGTaGGAGTTTGCTGGAAATTTC +
Preference number: 5 (lower is better)
Translates to: GKWFKATRFSGYIITREQVLFHK*EFAGNF
Trigger: GAAATTTCCAGCAAACTCCAACTTATGAAAAAGCAC...CTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCACTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TTCACAAGTATACAGTGGAGTGTTTCAGAGGCTACCCATCATATCACAACAGATCATTTGATTTCTGCCTaGATGTCACTTAGGATAGGA +
Preference number: 5 (lower is better)
Translates to: FTSIQWSVSEATHHITTDHLISA*MSLRIG
Trigger: TCCTATCCTAAGTGACATCAAGGCAGAAATCAAATG...ATCTGTTGTGATATGATGGGTAGCCTCTGAAACACTCCACTGTATACTTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp TGGTTCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAACTTTTTCAGGTCAGATaGGTGCTTTTTCATAAGTTG +
Preference number: 5 (lower is better)
Translates to: WFKATRFSGYIITREQVQLFQVR*VLFHKL
Trigger: CAACTTATGAAAAAGCACCAATCTGACCTGAAAAAG...TTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
CDS-3UTR CAA 90 bp TCAAGGCAACACGTTTTTCTGGCTATATCATTACAAGAGAGCAGGTGCAAAAGGAAAACACATTGTCCTTaGACAGTACCTTATCTTTCC +
Preference number: 5 (lower is better)
Translates to: SRQHVFLAISLQESRCKRKTHCP*TVPYLS
Trigger: GGAAAGATAAGGTACTGTCAAAGGACAATGTGTTTT...CCTTTTGCACCTGCTCTCTTGTAATGATATAGCCAGAAAAACGTGTTGCCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp CTAACTCTAAAAACCCTGGACATTATATATAAGTCAAACATAGGGAGACTCCGAGAGGTAGATGTGAATTaGACTGTCGTTTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LTLKTLDIIYKSNIGRLREVDVN*TVVSVM
Trigger: CATCACAGAAACGACAGTCAAATTCACATCTACCTC...TCGGAGTCTCCCTATGTTTGACTTATATATAATGTCCAGGGTTTTTAGAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS-3UTR CAA 90 bp AAGTGTGGGATTAATCTACCTAGAAGGGATGAGATGGAAGTGATCTATTTATCTCTTACTGAGATGACATaGTTTACTGTCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: KCGINLPRRDEMEVIYLSLTEMT*FTVLFC
Trigger: GCAGAAGAGGACAGTAAACAATGTCATCTCAGTAAG...AGATAAATAGATCACTTCCATCTCATCCCTTCTAGGTAGATTAATCCCACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310833.12
CDS TCA 72 bp TGGCAAGGCAGCGCCTCTCCTTGGCTGCTACTAACTTaGGCTCCCCTGGTTGGTCCCAAAGGCGGAGGGCGT +
Preference number: 6 (lower is better)
Translates to: WQGSASPWLLLT*APLVGPKGGGR
Trigger: ACGCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAAGGAGAGGCGCTGCCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS CCA 72 bp CTCTCCTTGGCTGCTACTAACTTGAGCTCCCCTGGTTaGTCCCAAAGGCGGAGGGCGTTAGGAGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LSLAATNLSSPG*SQRRRALGGRL
Trigger: CAGCCTCCCTCCTAACGCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS GCA 72 bp GCCCAAGACAGCCAGCAGGGCTCCCGAGGTGACCAGTaGAATCAGGGTCTTTTGGGAATAGCTCTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AQDSQQGSRGDQ*NQGLLGIALVA
Trigger: AGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGCTGGCTGTCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
ENST00000485761.1
CDS CAA 90 bp TTTTTAGTCTTGGCAAGGCAGCGCCTCTCCTTGGCTGCTACTAACTaGAGCTCCCCTGGTTGGTCCCAAAGGCGGAGGGCGTTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: FLVLARQRLSLAATN*SSPGWSQRRRALGG
Trigger: CCCTCCTAACGCCCTCCGCCTTTGGGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAAGGAGAGGCGCTGCCTTGCCAAGACTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS CCA 72 bp CCGTGTAATAAGGGTCTTCGCCCAGCCTTTCTCCTGTaGGGCTCCAGCTGCGGCGATTCATCAGGAAATAGC +
Preference number: 6 (lower is better)
Translates to: PCNKGLRPAFLL*GSSCGDSSGNS
Trigger: GCTATTTCCTGATGAATCGCCGCAGCTGGAGCCCCACAGGAGAAAGGCTGGGCGAAGACCCTTATTACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000367036.7
CDS CAA 72 bp CCTCCCTTTTTAGTCTTGGCAAGGCAGCGCCTCTCCTaGGCTGCTACTAACTTGAGCTCCCCTGGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: PPFLVLARQRLS*AATNLSSPGWS
Trigger: GGACCAACCAGGGGAGCTCAAGTTAGTAGCAGCCAAGGAGAGGCGCTGCCTTGCCAAGACTAAAAAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356522.4
CDS CAA 72 bp CAGGGCTCCCGAGGTGACCAGTGCAATCAGGGTCTTTaGGGAATAGCTCTGGTGGCTTGCAACATCTTGCTC +
Preference number: 6 (lower is better)
Translates to: QGSRGDQCNQGL*GIALVACNILL
Trigger: GAGCAAGATGTTGCAAGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
ENST00000485761.1
CDS CAA 90 bp GACAGCCAGCAGGGCTCCCGAGGTGACCAGTGCAATCAGGGTCTTTaGGGAATAGCTCTGGTGGCTTGCAACATCTTGCTCAGTGAAATC +
Preference number: 6 (lower is better)
Translates to: DSQQGSRGDQCNQGL*GIALVACNILLSEI
Trigger: GATTTCACTGAGCAAGATGTTGCAAGCCACCAGAGCTATTCCCAAAAGACCCTGATTGCACTGGTCACCTCGGGAGCCCTGCTGGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000367036.7
ENST00000485761.1
CDS CAA 90 bp CCAGGTGACAGGCTAGGCTTCAAGGTTGTCTCTGGAGTTGAAACGTaGGCTGGGGTGGTGAACACTGTGCTGATTACAGAGGTCTGTGAC +
Preference number: 6 (lower is better)
Translates to: PGDRLGFKVVSGVET*AGVVNTVLITEVCD
Trigger: GTCACAGACCTCTGTAATCAGCACAGTGTTCACCACCCCAGCCAACGTTTCAACTCCAGAGACAACCTTGAAGCCTAGCCTGTCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS CAA 72 bp GTTCCCTGGGTAGGTAACTCTGGGGTAGCAGTACCGTaGTTGTCAAGACTCATGAACCCAGAAGGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: VPWVGNSGVAVP*LSRLMNPEGSK
Trigger: TTTGCTGCCTTCTGGGTTCATGAGTCTTGACAACAACGGTACTGCTACCCCAGAGTTACCTACCCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS CAA 72 bp CGTTTCTGTGATGTTTGTTGTGGCCTCATTGCCATGTaGAGACACAGGGTGCAGGCTGGTACTTCCAAGGGT +
Preference number: 6 (lower is better)
Translates to: RFCDVCCGLIAM*RHRVQAGTSKG
Trigger: ACCCTTGGAAGTACCAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCCACAACAAACATCACAGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS TCA 72 bp GTTTCTGTGATGTTTGTTGTGGCCTCATTGCCATGTTaGGACACAGGGTGCAGGCTGGTACTTCCAAGGGTA +
Preference number: 6 (lower is better)
Translates to: VSVMFVVASLPC*DTGCRLVLPRV
Trigger: TACCCTTGGAAGTACCAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCCACAACAAACATCACAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS CAA 90 bp TTTGACTGTCGTTTCTGTGATGTTTGTTGTGGCCTCATTGCCATGTaGAGACACAGGGTGCAGGCTGGTACTTCCAAGGGTACTAGGTGT +
Preference number: 6 (lower is better)
Translates to: FDCRFCDVCCGLIAM*RHRVQAGTSKGTRC
Trigger: ACACCTAGTACCCTTGGAAGTACCAGCCTGCACCCTGTGTCTCAACATGGCAATGAGGCCACAACAAACATCACAGAAACGACAGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310833.12
ENST00000356522.4
CDS CAA 72 bp GTCCTTCTTAAACTCCGCACAGCTGGAGGTCTTATTTaGCTCCAGGCAGATGCCCTGAGTCAATTTCACTTC +
Preference number: 6 (lower is better)
Translates to: VLLKLRTAGGLI*LQADALSQFHF
Trigger: GAAGTGAAATTGACTCAGGGCATCTGCCTGGAGCAAAATAAGACCTCCAGCTGTGCGGAGTTTAAGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000485761.1
CDS TCA 72 bp CAGCTGGAGGTCTTATTTTGCTCCAGGCAGATGCCCTaGGTCAATTTCACTTCTCTGATGCCTGAACATTTG +
Preference number: 6 (lower is better)
Translates to: QLEVLFCSRQMP*VNFTSLMPEHL
Trigger: CAAATGTTCAGGCATCAGAGAAGTGAAATTGACTCAGGGCATCTGCCTGGAGCAAAATAAGACCTCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310833.12
ENST00000356522.4
ENST00000485761.1
CDS CCA 72 bp AAGGAATTGAAACTAAGACTTTCTCTTCAGTCCGGATaGCAGATGGCAGAGAAGGAAATGCCTGAACAGCCC +
Preference number: 6 (lower is better)
Translates to: KELKLRLSLQSG*QMAEKEMPEQP
Trigger: GGGCTGTTCAGGCATTTCCTTCTCTGCCATCTGCCATCCGGACTGAAGAGAAAGTCTTAGTTTCAATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS CAA 90 bp GTGGCCTCCTCCCTCTTTCTACCCAAAGGAGTCTCAAAAAGTGCATaGCTCAAACTGAAATGGCATTTTTGTCTCGTCTTCCATCTCTGT +
Preference number: 6 (lower is better)
Translates to: VASSLFLPKGVSKSA*LKLKWHFCLVFHLC
Trigger: ACAGAGATGGAAGACGAGACAAAAATGCCATTTCAGTTTGAGCAATGCACTTTTTGAGACTCCTTTGGGTAGAAAGAGGGAGGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS TCA 72 bp ATTCCAGCAGCCTCCAATCAGAGTGTCCTCCTCCCCTaGACAGGAAAGGAATTGAAACTAAGACTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: IPAASNQSVLLP*TGKELKLRLSL
Trigger: AAGAGAAAGTCTTAGTTTCAATTCCTTTCCTGTTCAGGGGAGGAGGACACTCTGATTGGAGGCTGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367036.7
CDS GCA 72 bp CTCCTCCCTCTTTCTACCCAAAGGAGTCTCAAAAAGTaGATTGCTCAAACTGAAATGGCATTTTTGTCTCGT +
Preference number: 6 (lower is better)
Translates to: LLPLSTQRSLKK*IAQTEMAFLSR
Trigger: ACGAGACAAAAATGCCATTTCAGTTTGAGCAATGCACTTTTTGAGACTCCTTTGGGTAGAAAGAGGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367036.7