RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD300LF (Homo sapiens)

Ensembl gene IDs: ENSG00000186074

Ensembl transcript IDs: ENST00000301573.13, ENST00000326165.11, ENST00000343125.8, ENST00000361254.8, ENST00000462044.5, ENST00000464910.5, ENST00000469092.5, ENST00000581500.1, ENST00000583937.5

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCTaGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGGGAGGTTCCG +
Preference number: 1 (lower is better)
Translates to: GKEAMVTYSTSTWST*AEESFVVAFCGEVP
Trigger: CGGAACCTCCCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR CCA 90 bp TCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGG +
Preference number: 1 (lower is better)
Translates to: SSFGKEAMVTYSTST*STWAEESFVVAFCG
Trigger: CCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR CCA 90 bp CTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTaGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCC +
Preference number: 1 (lower is better)
Translates to: LKISFNGLKSRRGQG*FLLEAPGRGIHSFP
Trigger: GGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR CCA 90 bp ATTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGGGCAGGGCTGGTTTCTTTTGGAGGC +
Preference number: 1 (lower is better)
Translates to: ILLQFWRPGAQDQFQ*AQVKAWAGLVSFGG
Trigger: GCCTCCAAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR GCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: FSCNSGGQELKISFNGLKGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: SPAILEARSSRSVSMGSSGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR GCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 2 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
3UTR-3UTR TCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 2 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR GCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 2 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 2 (lower is better)
Translates to: GGQELKISFNGLKSRRGQSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 2 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 2 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 2 (lower is better)
Translates to: GGQELKISFNGLKSRRGQLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR-3UTR TCA 90 bp GTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 2 (lower is better)
Translates to: VPDPQHPRSEMHRKCPPSARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...CGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
3UTR-3UTR TCA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 2 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 2 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR GCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 2 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 2 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR TCA 90 bp ACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATTTTGCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 2 (lower is better)
Translates to: TSLTFWPLSYEDPCGDILQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...CAAAATATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: KVLNLHTSALSLSATEGNKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CCA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 2 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR CAA 90 bp CGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATT +
Preference number: 2 (lower is better)
Translates to: RHTHVHFHHHFVSTS*TFWPLSYEDPCGDI
Trigger: AATATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR GCA 90 bp AACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: NLSISKSLTYIHLHCPFLRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR TCA 72 bp TCCAAGAAGGAGCCTGGAGTGCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGGGCTCCTCAGGGCCCC +
Preference number: 3 (lower is better)
Translates to: SKKEPGVQAKAC*WCCIPWAPQGP
Trigger: GGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
3UTR-3UTR CAA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CAA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CAA 90 bp TCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 3 (lower is better)
Translates to: SSFGKEAMVTYSTSTWSTLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...GGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR GCA 72 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTaGTCACGTCACACCCACGTCCACTTCCATCATCAC +
Preference number: 3 (lower is better)
Translates to: FLASEGCGIHGP*SRHTHVHFHHH
Trigger: GTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR GCA 72 bp GGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCTaGGGCATTCATGGCCCCTGCTCACGTCACACCCAC +
Preference number: 3 (lower is better)
Translates to: GIHSFPFLASEG*GIHGPCSRHTH
Trigger: GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR CCA 72 bp GCCATGGTGACATATTCCACTTCCACCTGGTCAACCTaGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGG +
Preference number: 3 (lower is better)
Translates to: AMVTYSTSTWST*AEESFVVAFCG
Trigger: CCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR CCA 72 bp GGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAAAGCTTCGTGGTAGCC +
Preference number: 3 (lower is better)
Translates to: GKEAMVTYSTST*STWAEESFVVA
Trigger: GGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
3UTR CCA 72 bp CAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGGGCAGGGCTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: QFWRPGAQDQFQ*AQVKAWAGLVS
Trigger: AGAAACCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CAA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CAA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: DILGPPESARITSLSQSPAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR-3UTR CAA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR TCA 72 bp ACGTCCACTTCCATCATCACTTTGTCTCTACCTCTTTaGCCTTCTGGCCTCTTTCTTATGAGGACCCTTGTG +
Preference number: 3 (lower is better)
Translates to: TSTSIITLSLPL*PSGLFLMRTLV
Trigger: CACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTGATGATGGAAGTGGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRPPSQE*GGHQKQ
Trigger: CTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGG...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000361254.8
CDS-3UTR GCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGTCGCCCTCCAGGGGCTaGAGTACCTGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLSPSRG*STCSGD
Trigger: GTCCCCAGAGCAGGTACTGCAGCCCCTGGAGGGCGA...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR GCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATCGCCCTCCAGGGGCTaGAGTACCTGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPSPSRG*STCSGD
Trigger: GTCCCCAGAGCAGGTACTGCAGCCCCTGGAGGGCGA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR TCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGGGGGCAGGAGGACACTaGGCTTCAGGAGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGGAGGH*ASGACA
Trigger: GGCACAAGCTCCTGAAGCTCAGTGTCCTCCTGCCCC...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR TCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR TCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR GCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGAGGGGCTGCAGTACCTaGTCTGGGGACATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAERGCST*SGDIPA
Trigger: AGCCGGGATGTCCCCAGAGCAGGTACTGCAGCCCCT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR TCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPPPSQE*GGHQKQ
Trigger: CTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR GCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR GCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAEKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGAGGCGTGGGCAGGGCTaGTTTCTTTTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLRRGQG*FLLEAP
Trigger: TGGAGCCTCCAAAAGAAACCAGCCCTGCCCACGCCT...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR TCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAEQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACTCGCCCTCCAGGGGCTaGAGTACCTGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHSPSRG*STCSGD
Trigger: GTCCCCAGAGCAGGTACTGCAGCCCCTGGAGGGCGA...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR GCA 90 bp TGCAGGCTAAGGCCTGCTGATGGTGCTGTATTCCGTGGGCTCCTCAGGGCCCCTGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: CRLRPADGAVFRGLLRAPDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...AGGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCAGGCCTTAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR GCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAEDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAELLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGTGCCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAECLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGGCA...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CCA 90 bp TGCAGGCTAAGGCCTGCTGATGGTGCTGTATTCCGTGGGCTCCTCAGGGCCCCTTGCCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CRLRPADGAVFRGLLRAPCLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGGCA...AGGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCAGGCCTTAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTGCCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGCLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGGCA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR TCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGGACAATGGAGTAGCCTaGGAGCCAGAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGDNGVA*EPEEEQ
Trigger: CTGCTCCTCTTCTGGCTCTCAGGCTACTCCATTGTC...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000583937.5
CDS-3UTR TCA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCGGGGCAGGAGGACACTaGGCTTCAGGAGCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTGAGGH*ASGACA
Trigger: GGCACAAGCTCCTGAAGCTCAGTGTCCTCCTGCCCC...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
CDS-3UTR TCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: GGQELKISFNGLKSRRGQGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACCCCTCAGTGGAGCCTaGCAGCAGGAACAAACTACA +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPPLSGA*QQEQTT
Trigger: TGTAGTTTGTTCCTGCTGCCAGGCTCCACTGAGGGG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCCCCCGTTCCCCTCAGTaGAGCCTGGCAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTPRSPQ*SLAAGT
Trigger: TGTTCCTGCTGCCAGGCTCCACTGAGGGGAACGGGG...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000469092.5
CDS-3UTR CCA 90 bp TGCAGGCTAAGGCCTGCTGATGGTGCTGTATTCCGTGGGCTCCTCAGGGCCCCTGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CRLRPADGAVFRGLLRAPVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...AGGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCAGGCCTTAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SSFGKEAMVTYSTSTWSTPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...GGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR CCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGTGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GGQELKISFNGLKSRRGQWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGGCAGGAGTCGACGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAEGRSRR*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCGTCGACTCCTGCC...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000583937.5
CDS-3UTR TCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRPPSQE*GGHQKQ
Trigger: CTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGG...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
CDS-3UTR TCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR TCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACCTGGTCTCCATGTGCTaGGAGCCAGAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHLVSMC*EPEEEQ
Trigger: CTGCTCCTCTTCTGGCTCTCAGCACATGGAGACCAG...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR GCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGAGGGGCTGCAGTACCTaGTCTGGGGACATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLRGCST*SGDIPA
Trigger: AGCCGGGATGTCCCCAGAGCAGGTACTGCAGCCCCT...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTTCGCCCTCCAGGGGCTaGAGTACCTGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSSPSRG*STCSGD
Trigger: GTCCCCAGAGCAGGTACTGCAGCCCCTGGAGGGCGA...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGQELKISFNGLKSRRGQFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QELKISFNGLKSRRGQGWFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp AACCTGGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGGGAGGTTCCGGCCAGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: NLGRGKLRGSLLRGGSGQRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR GCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGAGCTTCAGGAGCTTGTaGCTGTTGTCCAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAESFRSL*LLSKWW
Trigger: CCACCACTTGGACAACAGGCACAAGCTCCTGAAGCT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR GCA 90 bp TGGTCAACCTGGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGGGAGGTTCCGTCGCCCTCCAGGGGCTaGAGTACCTGTTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WSTWAEESFVVAFCGEVPSPSRG*STCCPS
Trigger: ACTTGGACAACAGGTACTGCAGCCCCTGGAGGGCGA...CGGAACCTCCCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR CCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGTTGGGTGACTGGTGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLLGDWC*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCACCAGTCACCCAA...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SVPDPQHPRSEMHRKCPPPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...AGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACCTGCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHLLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGCAG...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAACTGCAGTACCTGCTCTaGGGACATCCCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQLQYLL*GHPGCC
Trigger: ACAGCAGCCGGGATGTCCCCAGAGCAGGTACTGCAG...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR TCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR TCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GGQELKISFNGLKSRRGQQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAATCCCGGCTGCTTTCTaGTGGTACTTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPIPAAF*WYFIIL
Trigger: GAGGATGATGAAGTACCAGCAGAAAGCAGCCGGGAT...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000583937.5
CDS-3UTR GCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGATCCCGGCTGCTTTCTaGTGGTACTTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAEIPAAF*WYFIIL
Trigger: GAGGATGATGAAGTACCAGCAGAAAGCAGCCGGGAT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000583937.5
CDS-3UTR GCA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCAGGGGCTGCAGTACCTaGTCTGGGGACATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVRGCST*SGDIPA
Trigger: AGCCGGGATGTCCCCAGAGCAGGTACTGCAGCCCCT...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp TTCCACCTGGTCAACCTGGGCAGAGGAAAGCTTCGTGGTAGCCTTTTGCGGGGAGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: FHLVNLGRGKLRGSLLRGDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...TCCCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR GCA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGACAAATTTATTCTCCTaGAATTCTGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRTNLFS*NSGGQE
Trigger: CTCCTGGCCTCCAGAATTGCAGGAGAATAAATTTGT...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCCCCGTTCCCCTCAGTaGAGCCTGGCAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSPRSPQ*SLAAGT
Trigger: TGTTCCTGCTGCCAGGCTCCACTGAGGGGAACGGGG...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000469092.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTTCTTCTTGGGTGACTaGTGCTGGGTCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGFFLGD*CWVNGH
Trigger: GTGACCATTGACCCAGCACCAGTCACCCAAGAAGAA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TGCAGGCTAAGGCCTGCTGATGGTGCTGTATTCCGTGGGCTCCTCAGGGCCCCTCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CRLRPADGAVFRGLLRAPLLVSS*VTGAGS
Trigger: TGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAG...AGGGGCCCTGAGGAGCCCACGGAATACAGCACCATCAGCAGGCCTTAGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACCGGCTGCTTTCTGCTaGTACTTCATCATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPPAAFC*YFIILQ
Trigger: TTGGAGGATGATGAAGTACCAGCAGAAAGCAGCCGG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000583937.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGAGGCGTGGGCAGGGCTaGTTTCTTTTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRRRGQG*FLLEAP
Trigger: TGGAGCCTCCAAAAGAAACCAGCCCTGCCCACGCCT...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCGCTCAAGTCAAGGCGTaGGCAGGGCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPAQVKA*AGLVSF
Trigger: AAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGC...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGACAATGGAGTAGCCTaGGAGCCAGAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRDNGVA*EPEEEQ
Trigger: CTGCTCCTCTTCTGGCTCTCAGGCTACTCCATTGTC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000326165.11
CDS-3UTR TCA 90 bp CGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGACAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RQGSHGDIFHFHLVNLGRQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...TCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR TCA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGGGCAGACGGTCGATaGGGCAGGAGTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQGADGR*GRSVLT
Trigger: TGTGAGCACACTCCTGCCTCATCGACCGTCTGCCCC...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SVPDPQHPRSEMHRKCPPLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...AGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR GCA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GGQELKISFNGLKSRRGQRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGTTCTTGGGTGACTGGTaGTGTAAACGTAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGFLGDW*CKRSGG
Trigger: ACCTCCACTACGTTTACAGCACCAGTCACCCAAGAA...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CCA 90 bp GCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AHVAVGRFLILSTQGQRCVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...GCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAATGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACAGGGCTGGTTTCTTTTaGAGGCTCCAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHRAGFF*RLQAGE
Trigger: TTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCT...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCAGGCGTGGGCAGGGCTaGTTTCTTTTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGRRGQG*FLLEAP
Trigger: TGGAGCCTCCAAAAGAAACCAGCCCTGCCCACGCCT...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACGCTCAAGTCAAGGCGTaGGCAGGGCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHAQVKA*AGLVSF
Trigger: AAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGC...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCCACATCAGATGGCTGTaGAGAGGCTGTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AHVAVGRFLILSTQGQRCHIRWL*RGCPGG
Trigger: ACCACCAGGACAGCCTCTCCACAGCCATCTGATGTG...GCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAACACATCAGATGGCTGTaGAGAGGCTGTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQHIRWL*RGCPGG
Trigger: ACCACCAGGACAGCCTCTCCACAGCCATCTGATGTG...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGCTCCCAGCCTTCTGCTaGTACTCACTCTCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLLPAFC*YSLSPL
Trigger: CAAGGGCGAGAGTGAGTACCAGCAGAAGGCTGGGAG...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR TCA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATAAACCACCCTGGATaGATGCCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLINHPG*MPLKLI
Trigger: GATCAACTTCAAAGGCATTCATCCAGGGTGGTTTAT...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR GCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACTCCCTCTTCACCTCCTaGTCTGACCCACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHSLFTS*SDPLVL
Trigger: TAAAACCAGTGGGTCAGAGCAGGAGGTGAAGAGGGA...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGTGCAGGTCTGTAGTTTaGAGCCTGGGAACCCTCACT +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRCRSVV*SLGTLT
Trigger: AGTGAGGGTTCCCAGGCTGCAAACTACAGACCTGCA...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR GCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTTCGCCCTCCAGGGGCTaGAGTACCTTTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCSPSRG*STFLLV
Trigger: TACCAGCAGAAAGGTACTGCAGCCCCTGGAGGGCGA...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR GCA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCAGACTCCCAGCCTTCTaGTGGTACTCACTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVRLPAF*WYSLSP
Trigger: GGGCGAGAGTGAGTACCAGCAGAAGGCTGGGAGTCT...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCACTTCTTCTTGGGTGACTaGTGCTGGGTCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: FLASEGCGIHGPCSRHTHFFLGD*CWVNGH
Trigger: GTGACCATTGACCCAGCACCAGTCACCCAAGAAGAA...GTGGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSCNSGGQELKISFNGLKWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTTGGTGCTGTATTCCGTaGGCTCCTCAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSWCCIP*APQGPC
Trigger: GCAGGGGCCCTGAGGAGCCCACGGAATACAGCACCA...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGAGGGCTGGTTTCTTTTaGAGGCTCCAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLRAGFF*RLQAGE
Trigger: TTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCT...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGAGGCGTGGGCAGGGCTaGTTTCTTTTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWRRGQG*FLLEAP
Trigger: TGGAGCCTCCAAAAGAAACCAGCCCTGCCCACGCCT...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACGCTCAAGTCAAGGCGTaGGCAGGGCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHAQVKA*AGLVSF
Trigger: AAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGC...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTCAAGTCAAGGCGTaGGCAGGGCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRAQVKA*AGLVSF
Trigger: AAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCATTCTCCTGCAATTCTaGAGGCCAGGAGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPILLQF*RPGAQD
Trigger: ATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATTCTTCTTGGGTGACTaGTGCTGTAAACGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPFFLGD*CCKRSG
Trigger: TCCACTACGTTTACAGCACCAGTCACCCAAGAAGAA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CCA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACTGCTAGTTTCTTCTTaGGTGACTGGTGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: PKPNPELGAMLADQAEAPLLVSS*VTGAVN
Trigger: GTTTACAGCACCAGTCACCCAAGAAGAAACTAGCAG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CCA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAGTACCTTTCTGCTaGTACTTCATCATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGAVPFC*YFIILQ
Trigger: TTGGAGGATGATGAAGTACCAGCAGAAAGGTACTGC...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CCA 90 bp GGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGAGTACCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GKEAMVTYSTSTWSTWAEYLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGGTA...CTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR TCA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCCCTTTCTGGCATCTaGAGGCTGCGGCATTCATGG +
Preference number: 4 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVSLSGI*RLRHSW
Trigger: CCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGA...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTCCCTTTCTGGCATCTaGAGGCTGCGGCATTCATGG +
Preference number: 4 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWSLSGI*RLRHSW
Trigger: CCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGA...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGAGGAAAGCTTCGTGGTACTCATGAGGTCGAGCTaGGGCAGCCACATCAGATGG +
Preference number: 4 (lower is better)
Translates to: VTYSTSTWSTWAEESFVVLMRSS*GSHIRW
Trigger: CCATCTGATGTGGCTGCCTCAGCTCGACCTCATGAG...TACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR GCA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGTCCCTCTTCACCTCCTaGTCTGACCCACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: QELKISFNGLKSRRGQGWSLFTS*SDPLVL
Trigger: TAAAACCAGTGGGTCAGAGCAGGAGGTGAAGAGGGA...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQRCIGNVLLRQGSHGDIFVVAF*GEVPAS
Trigger: GCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAA...TATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR GCA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR GCA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGACAAATTTATTCTCCTaGAATTCTGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LGPKPNPELGAMLADQAETNLFS*NSGGQE
Trigger: CTCCTGGCCTCCAGAATTGCAGGAGAATAAATTTGT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCTTGGGTGACTGGTGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: AHVAVGRFLILSTQGQRCLGDWC*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCACCAGTCACCCAA...GCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAATTGGGTGACTGGTGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQLGDWC*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCACCAGTCACCCAA...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FGKEAMVTYSTSTWSTWAVAGQS*GAASFF
Trigger: GAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCAC...TGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR CCA 90 bp TCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVPDPQHPRSEMHRKCPPLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...AGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGATTCCTTTCCCTTTCTaGCATCTGAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRIPFPF*HLKAAA
Trigger: TGCCGCAGCCTTCAGATGCCAGAAAGGGAAAGGAAT...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCATTCCTTTCCCTTTCTaGCATCTGAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTIPFPF*HLKAAA
Trigger: TGCCGCAGCCTTCAGATGCCAGAAAGGGAAAGGAAT...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGATTCCTTTCCCTTTCTaGCATCTGAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: QELKISFNGLKSRRGQGWIPFPF*HLKAAA
Trigger: TGCCGCAGCCTTCAGATGCCAGAAAGGGAAAGGAAT...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQQDQFQ*AQVKAW
Trigger: CCACGCCTTGACTTGAGCCCATTGAAACTGATCTTG...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGATTCTCCTGCAATTCTaGAGGCCAGGAGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQILLQF*RPGAQD
Trigger: ATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGAGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: RQGSHGDIFHFHLVNLGRARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...TCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR TCA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 4 (lower is better)
Translates to: QELKISFNGLKSRRGQGWSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAATCCCTTTCTGGCATCTaGAGGCTGCGGCATTCATGG +
Preference number: 4 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQSLSGI*RLRHSW
Trigger: CCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGA...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCTCATGAGGTCGAGCTaGGGCAGCCACATCAGATGG +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSLMRSS*GSHIRW
Trigger: CCATCTGATGTGGCTGCCTCAGCTCGACCTCATGAG...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR GCA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCCCTCTTCACCTCCTaGTCTGACCCACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLSLFTS*SDPLVL
Trigger: TAAAACCAGTGGGTCAGAGCAGGAGGTGAAGAGGGA...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VPDPQHPRSEMHRKCPPSRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCCCCCTCAGTGGAGCCTaGCAGCAGGAACAAACTACA +
Preference number: 4 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVPLSGA*QQEQTT
Trigger: TGTAGTTTGTTCCTGCTGCCAGGCTCCACTGAGGGG...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSCNSGGQELKISFNGLKLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATACTCCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQRCIGNVLLRQGSHGDILLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGGAG...TATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR CCA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTCCCCTGCCGGGGAGGTaGCTACTGAGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: DILGPPESARITSLSQSPPLPGR*LLRWPM
Trigger: CATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGG...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTGCTCAAGTCAAGGCGTaGGCAGGGCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCAQVKA*AGLVSF
Trigger: AAAAGAAACCAGCCCTGCCCACGCCTTGACTTGAGC...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QELKISFNGLKSRRGQGWQDQFQ*AQVKAW
Trigger: CCACGCCTTGACTTGAGCCCATTGAAACTGATCTTG...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAACAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQQDQFQ*AQVKAW
Trigger: CCACGCCTTGACTTGAGCCCATTGAAACTGATCTTG...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCTGCAGTACCTGCTCTaGGGACATCCCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CIGNVLLRQGSHGDIFHFLQYLL*GHPGCC
Trigger: ACAGCAGCCGGGATGTCCCCAGAGCAGGTACTGCAG...GAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGCAAGGAAGCCATGGTaGCATATTCCACTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSARKPW*HIPLPP
Trigger: AGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGC...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 4 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTTGTGCCTGATGAGCTaGAGGTCTGTAGTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWLCLMS*RSVVCS
Trigger: GCTGCAAACTACAGACCTGCAGCTCATCAGGCACAA...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCCCCTCAGTGGAGCCTaGCAGCAGGAACAAACTACA +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSPLSGA*QQEQTT
Trigger: TGTAGTTTGTTCCTGCTGCCAGGCTCCACTGAGGGG...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTTTCTTCTTGGGTGACTaGTGCTGGGTCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSFFLGD*CWVNGH
Trigger: GTGACCATTGACCCAGCACCAGTCACCCAAGAAGAA...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCACCTGGTCAACCCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSFGKEAMVTYSTSTWSTLLVSS*VTGAGS
Trigger: TGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAG...GGTTGACCAGGTGGAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR CCA 90 bp GCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: AHVAVGRFLILSTQGQRCLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...GCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAACTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTGGCAGGAGTCGACGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSGRSRR*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCGTCGACTCCTGCC...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CCA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCTTCTTCTTGGGTGACTaGTGCTGTAAACGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTFFLGD*CCKRSG
Trigger: TCCACTACGTTTACAGCACCAGTCACCCAAGAAGAA...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR TCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACCTCCTAGAAGCCCCCTaGGACTTGGCCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNLLEAP*DLAPSP
Trigger: TGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAG...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCTCCCTCTTCACCTCCTaGTCTGACCCACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVSLFTS*SDPLVL
Trigger: TAAAACCAGTGGGTCAGAGCAGGAGGTGAAGAGGGA...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GTGACATATTCCACTTCCACCTGGTCAACCTGGGCAGAGGAAAGCTTCGTGGTATCCCTCTTCACCTCCTaGTCTGACCCACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: VTYSTSTWSTWAEESFVVSLFTS*SDPLVL
Trigger: TAAAACCAGTGGGTCAGAGCAGGAGGTGAAGAGGGA...TACCACGAAGCTTTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR GCA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAATCCCGGCTGCTTTCTaGTGGTACTTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQIPAAF*WYFIIL
Trigger: GAGGATGATGAAGTACCAGCAGAAAGCAGCCGGGAT...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR GCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGGGGCTGCAGTACCTaGTCTGGGGACATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNRGCST*SGDIPA
Trigger: AGCCGGGATGTCCCCAGAGCAGGTACTGCAGCCCCT...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp AACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGTCGCCCTCCAGGGGCTaGAGTACCTGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: NLSISKSLTYIHLHCPFLSPSRG*STCSGD
Trigger: GTCCCCAGAGCAGGTACTGCAGCCCCTGGAGGGCGA...CAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACAAATTTATTCTCCTaGAATTCTGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHTNLFS*NSGGQE
Trigger: CTCCTGGCCTCCAGAATTGCAGGAGAATAAATTTGT...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTTCTTGGGTGACTGGTaGTGTAAACGTAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWFLGDW*CKRSGG
Trigger: ACCTCCACTACGTTTACAGCACCAGTCACCCAAGAA...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CCA 90 bp CTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LKVLNLHTSALSLSATEGKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...ACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GGGCTGGTTTCTTTTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTATTCTCCTGCAATTCTaGAGGCCAGGAGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: GLVSFGGSRQGNPFLSLSILLQF*RPGAQD
Trigger: ATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT...AGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTATTCTCCTGCAATTCTaGAGGCCAGGAGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSILLQF*RPGAQD
Trigger: ATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGTCACAGGTTCGACAATGGAGTAGCCTaGGAGCCAGAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LHTSALSLSATEGNSHRFDNGVA*EPEEEQ
Trigger: CTGCTCCTCTTCTGGCTCTCAGGCTACTCCATTGTC...GAACCTGTGACTGTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000326165.11
CDS-3UTR TCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNPPSQE*GGHQKQ
Trigger: CTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGG...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
CDS-3UTR GCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATAGCTTCAGGAGCTTGTaGCTGTTGTCCAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDSFRSL*LLSKWW
Trigger: CCACCACTTGGACAACAGGCACAAGCTCCTGAAGCT...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000361254.8
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTTTGGGTGACTGGTGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSLGDWC*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCACCAGTCACCCAA...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCTTCTTGGGTGACTaGTGCTGGGTCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: GQRCIGNVLLRQGSHGDIFFLGD*CWVNGH
Trigger: GTGACCATTGACCCAGCACCAGTCACCCAAGAAGAA...TATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FSCNSGGQELKISFNGLKLLVSS*VTGAGS
Trigger: TGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAG...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LKVLNLHTSALSLSATEGLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...ACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGCCGGCTGCTTTCTGCTaGTACTTCATCATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSCNSGGQELKISFNGLKPAAFC*YFIILQ
Trigger: TTGGAGGATGATGAAGTACCAGCAGAAAGCAGCCGG...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000326165.11
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTAAGCCCCCTGAGACTTaGCCCCAAGCCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: DILGPPESARITSLSQSPKPPET*PQAQPR
Trigger: TCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTT...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 4 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGTCACAGGTTCAGGGCTGGTTTCTTTTaGAGGCTCCAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LHTSALSLSATEGNSHRFRAGFF*RLQAGE
Trigger: TTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCT...GAACCTGTGACTGTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp ACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATTTTGCTGCTGTTGTCCAAGTaGTGGCCGGTCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TSLTFWPLSYEDPCGDILLLLSK*WPVRVG
Trigger: CCCAACTCTGACCGGCCACCACTTGGACAACAGCAG...CAAAATATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR TCA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTCAGGCTAAGGCCTGCTaGTGGTGCTGTATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: DILGPPESARITSLSQSPQAKAC*WCCIPW
Trigger: CCACGGAATACAGCACCATCAGCAGGCCTTAGCCTG...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp ACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATTTTGAGAAGGAGCCTGGAGTaGAGGCTAAGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TSLTFWPLSYEDPCGDILRRSLE*RLRPAD
Trigger: ATCAGCAGGCCTTAGCCTGCACTCCAGGCTCCTTCT...CAAAATATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACGATGAGGCAGGAGTGTaGTCACAGCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNDEAGV*SQPGVQ
Trigger: TTGGACCCCAGGCTGTGAGCACACTCCTGCCTCATC...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp TTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGTCACAGGTTCAGCTTCAGGAGCTTGTaGCTGTTGTCCAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LHTSALSLSATEGNSHRFSFRSL*LLSKWW
Trigger: CCACCACTTGGACAACAGGCACAAGCTCCTGAAGCT...GAACCTGTGACTGTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000361254.8
CDS-3UTR CCA 90 bp TGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CIGNVLLRQGSHGDIFHFLLVSS*VTGAGS
Trigger: TGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAG...GAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp CAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QRCIGNVLLRQGSHGDIFLLVSS*VTGAGS
Trigger: TGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAG...GAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CCA 90 bp TGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCACTTCATTCCTTTCCCTTTCTaGCATCTGAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: CIGNVLLRQGSHGDIFHFIPFPF*HLKAAA
Trigger: TGCCGCAGCCTTCAGATGCCAGAAAGGGAAAGGAAT...GAAGTGGAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp ACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATTTTGAGGGCTGGTTTCTTTTaGAGGCTCCAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TSLTFWPLSYEDPCGDILRAGFF*RLQAGE
Trigger: TTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCT...CAAAATATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSQDQFQ*AQVKAW
Trigger: CCACGCCTTGACTTGAGCCCATTGAAACTGATCTTG...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCACAAATTTATTCTCCTaGAATTCTGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVTNLFS*NSGGQE
Trigger: CTCCTGGCCTCCAGAATTGCAGGAGAATAAATTTGT...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTTTCTTCTTGGGTGACTaGTGCTGGGTCAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCFFLGD*CWVNGH
Trigger: GTGACCATTGACCCAGCACCAGTCACCCAAGAAGAA...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp AACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCTGTTGTCCAAGTGGTaGCCGGTCAGAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NLSISKSLTYIHLHCPFLLLSKW*PVRVGE
Trigger: CTCCCCAACTCTGACCGGCCACCACTTGGACAACAG...CAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTCCGGCTGCTTTCTGCTaGTACTTCATCATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCPAAFC*YFIILQ
Trigger: TTGGAGGATGATGAAGTACCAGCAGAAAGCAGCCGG...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000326165.11
CDS-3UTR CCA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTTATTCCACTTCCACCTaGTCAACCTGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCYSTST*STWAEE
Trigger: TTCCTCTGCCCAGGTTGACCAGGTGGAAGTGGAATA...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 4 (lower is better)
Translates to: SPAILEARSSRSVSMGSSTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...ACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATCAAGATCAGTTTCAATaGGCTCAAGTCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDQDQFQ*AQVKAW
Trigger: CCACGCCTTGACTTGAGCCCATTGAAACTGATCTTG...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR TCA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTTCTTCATCATTCCCATaGAAGCCCCAGAGCATATCC +
Preference number: 4 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCSSSFP*KPQSIS
Trigger: GGATATGCTCTGGGGCTTTCATGGGAATGATGAAGA...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCCTGCTAGTTTCTTCTTaGGTGACTGGTGCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: QRCIGNVLLRQGSHGDIFLLVSS*VTGAVN
Trigger: GTTTACAGCACCAGTCACCCAAGAAGAAACTAGCAG...GAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361254.8
3UTR CAA 72 bp CACGTCCACTTCCATCATCACTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGT +
Preference number: 4 (lower is better)
Translates to: HVHFHHHFVSTS*TFWPLSYEDPC
Trigger: ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTGATGATGGAAGTGGACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTTTGGGTGACTGGTGCTaGGTCAATGGTCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: DILGPPESARITSLSQSPLGDWC*VNGHLN
Trigger: GTTCAAGTGACCATTGACCCAGCACCAGTCACCCAA...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CCA 90 bp TTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGTCACAGGTTCCTTGTGGTGATATTTTaGGCCCACCTGAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LHTSALSLSATEGNSHRFLVVIF*AHLNQQ
Trigger: TTGCTGATTCAGGTGGGCCCAAAATATCACCACAAG...GAACCTGTGACTGTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
3UTR CAA 72 bp TGGCCTCTTTCTTATGAGGACCCTTGTGGTGATATTTaGGGCCCACCTGAATCAGCAAGAATAACCTCTCTA +
Preference number: 4 (lower is better)
Translates to: WPLSYEDPCGDI*GPPESARITSL
Trigger: TAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATCACCACAAGGGTCCTCATAAGAAAGAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTGCTGCAGTACCTTTCTaGTGGTACTTCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: DILGPPESARITSLSQSPAAVPF*WYFIIL
Trigger: GAGGATGATGAAGTACCAGCAGAAAGGTACTGCAGC...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CCA 90 bp AATAACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTAGGGCTGGTTTCTTTTaGAGGCTCCAGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NNLSISKSLTYIHLHCPFRAGFF*RLQAGE
Trigger: TTCCCCTGCCTGGAGCCTCCAAAAGAAACCAGCCCT...AAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACATTCTCCTGCAATTCTaGAGGCCAGGAGCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNILLQF*RPGAQD
Trigger: ATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAAT...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CCA 90 bp CAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGTGACATATTCTGGAATAAACCACCCTaGATGAATGCCTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: QRCIGNVLLRQGSHGDIFWNKPP*MNAFEV
Trigger: AACTTCAAAGGCATTCATCCAGGGTGGTTTATTCCA...GAATATGTCACCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS-3UTR CCA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACACCTCTTTGACCTTCTaGCCTCTTTCTTATGAGGAC +
Preference number: 4 (lower is better)
Translates to: KVLNLHTSALSLSATEGNTSLTF*PLSYED
Trigger: GTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGT...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR GCA 90 bp AACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGACAAATTTATTCTCCTaGAATTCTGGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLSISKSLTYIHLHCPFLTNLFS*NSGGQE
Trigger: CTCCTGGCCTCCAGAATTGCAGGAGAATAAATTTGT...CAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGACATCCCGGCTGCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRTSRLL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGCAGCCGGGATGT...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LGPKPNPELGAMLADQAEAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CAA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCACTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PKPNPELGAMLADQAEAPLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CAA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGAGGAGCTTGTGCCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLRSLCL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGGCACAAGCTCCT...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS-3UTR CAA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGAGGAGCTTGTGCCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LGPKPNPELGAMLADQAERSLCL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGGCACAAGCTCCT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CAA 90 bp AGGGCCCCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTGTTGGACCGGTGATTaGAGTGACAATGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: RAPAGEVATEVAHVAVGRCWTGD*SDNGVA
Trigger: GGCTACTCCATTGTCACTCAAATCACCGGTCCAACA...CCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: QELKISFNGLKSRRGQGWAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GGQELKISFNGLKSRRGQAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: AHVAVGRFLILSTQGQRCLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...GCATCTCTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp GCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAACTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: ATEVAHVAVGRFLILSTQLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...TTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp TTTCCCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: FPFLASEGCGIHGPCSRHLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...GTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CCAACTCCTAGAAGCCCCCTGAGACTTGGCCCCAAGCCCAACCCAGAGCTAGGGCTGAGCTTCAGGAGCTaGTGCCTGTTGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PTPRSPLRLGPKPNPELGLSFRS*CLLSKW
Trigger: CCACTTGGACAACAGGCACAAGCTCCTGAAGCTCAG...CCCTAGCTCTGGGTTGGGCTTGGGGCCAAGTCTCAGGGGGCTTCTAGGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326165.11
ENST00000361254.8
ENST00000583937.5
CDS CCA 90 bp GGGGACATCCCGGCTGCTGTTGTCCAAGTGGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTCTTGGGTGACTGGTGCTGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: GDIPAAVVQVVAGQS*GAASFFLGDWCWVN
Trigger: ATTGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCACCACTTGGACAACAGCAGCCGGGATGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTACCGAACCCTCACTCCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: GPCSRHTHVHFHHHFVSTEPSLL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGGAGTGAGGGTTC...GGTAGAGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR CAA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGCTGAGCTTCAGGAGCTaGTGCCTGATGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQLSFRS*CLMSCR
Trigger: CCTGCAGCTCATCAGGCACAAGCTCCTGAAGCTCAG...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR CAA 90 bp CACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAGGAAGCCATGGGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: HPRSEMHRKCPPSARKPWAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...CCATGGCTTCCTTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS GCA 90 bp CTGAGCTTCAGGAGCTTGTGCCTGATGAGCTGCAGGTCTGTAGTTTaGAGCCTGGGAACCCTCACTCCTGTTGTCCAAGTGGTGGCCGGT +
Preference number: 5 (lower is better)
Translates to: LSFRSLCLMSCRSVV*SLGTLTPVVQVVAG
Trigger: ACCGGCCACCACTTGGACAACAGGAGTGAGGGTTCCCAGGCTGCAAACTACAGACCTGCAGCTCATCAGGCACAAGCTCCTGAAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS CCA 90 bp GGGCATCTTCTCTTCAGACAGGTCCCCGTTCCCCTCAGTGGAGCCTaGCAGCAGGAACAAACTACAGACTCCCAGCCTTCTGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: GHLLFRQVPVPLSGA*QQEQTTDSQPSAGT
Trigger: AGTACCAGCAGAAGGCTGGGAGTCTGTAGTTTGTTCCTGCTGCCAGGCTCCACTGAGGGGAACGGGGACCTGTCTGAAGAGAAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301573.13
ENST00000469092.5
CDS CCA 90 bp CCAGGGGCTGCAGTACCTGTTGTCCAAGTGGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTCTTGGGTGACTGGTGCTGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: PGAAVPVVQVVAGQS*GAASFFLGDWCWVN
Trigger: ATTGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCACCACTTGGACAACAGGTACTGCAGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS-3UTR CAA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGAGGACACAGATATCTTaGGGGGCCATTATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: LGPKPNPELGAMLADQAERTQIS*GAIIQP
Trigger: GGGCTGAATAATGGCCCCCAAAGATATCTGTGTCCT...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp TTGGAGGCTCCAGGCAGGGGAATCCATTCCTTTCCCTTTCTGGCATCTGAAGGCAGGAGCTTGTGCCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LEAPGRGIHSFPFLASEGRSLCL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGGCACAAGCTCCT...GCCTTCAGATGCCAGAAAGGGAAAGGAATGGATTCCCCTGCCTGGAGCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000361254.8
CDS-3UTR CAA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRAASFF*GDWCWV
Trigger: GACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CCTTTCTGGCATCTGAAGGCTGCGGCATTCATGGCCCCTGCTCACGTCACACCCAGGACACAGATATCTTaGGGGGCCATTATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PFWHLKAAAFMAPAHVTPRTQIS*GAIIQP
Trigger: GGGCTGAATAATGGCCCCCAAAGATATCTGTGTCCT...GGGTGTGACGTGAGCAGGGGCCATGAATGCCGCAGCCTTCAGATGCCAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAACATCCCGGCTGCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQTSRLL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGCAGCCGGGATGT...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCAGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PKPNPELGAMLADQAEAPAASFF*GDWCCK
Trigger: TTTACAGCACCAGTCACCCAAGAAGAAACTAGCAGC...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000583937.5
CDS-3UTR CAA 90 bp GTTCCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGGGCTGCAGTACCTGTaGTCCAAGTGGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: VPDPQHPRSEMHRKCPPSGLQYL*SKWWPV
Trigger: GACCGGCCACCACTTGGACAACAGGTACTGCAGCCC...CGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462044.5
CDS TCA 90 bp CCCGGCTGCTTTCTGCTGGTACTTCATCATCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAGCAGCAATATGGTGAAGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: PGCFLLVLHHPPSQE*GGHQKQQQYGEDEG
Trigger: CCCCTCATCTTCACCATATTGCTGCTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGGATGATGAAGTACCAGCAGAAAGCAGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000464910.5
ENST00000583937.5
CDS CCA 90 bp CTTCAGGAGCTTGTGCCTGTTGTCCAAGTGGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTCTTGGGTGACTGGTGCTGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LQELVPVVQVVAGQS*GAASFFLGDWCWVN
Trigger: ATTGACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCACCACTTGGACAACAGGCACAAGCTCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000464910.5
CDS-3UTR CAA 90 bp GAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGATCCTCAGCACCCAAGGTCAGTGTTGGACCGGTGATTaGAGTGACAATGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: EVAHVAVGRFLILSTQGQCWTGD*SDNGVA
Trigger: GGCTACTCCATTGTCACTCAAATCACCGGTCCAACA...CTGACCTTGGGTGCTGAGGATCAGGAACCGACCTACTGCAACATGGGCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp CCTGCCGGGGAGGTGGCTACTGAGGTGGCCCATGTTGCAGTAGGTCGGTTCCTGGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: PAGEVATEVAHVAVGRFLVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...CAGGAACCGACCTACTGCAACATGGGCCACCTCAGTAGCCACCTCCCCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp CCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGCACCATTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PKPNPELGAMLADQAEAPFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...TGGTGCCTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS CCA 90 bp CTTCAGGAGCTTGTGCCTGTTGTCCAAGTGGTGGCCGGTCAGAGTTaGGGAGCTGCTAGTTTCTTCTTGGGTGACTGGTGCTGTAAACGT +
Preference number: 5 (lower is better)
Translates to: LQELVPVVQVVAGQS*GAASFFLGDWCCKR
Trigger: ACGTTTACAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACTCTGACCGGCCACCACTTGGACAACAGGCACAAGCTCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361254.8
ENST00000581500.1
ENST00000583937.5
CDS-3UTR CAA 90 bp GGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGTGTTGGACCGGTGATTaGAGTGACAATGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GGQELKISFNGLKSRRGQCWTGD*SDNGVA
Trigger: GGCTACTCCATTGTCACTCAAATCACCGGTCCAACA...CTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTTGGCCCCAAGCCCAACCCAGAGCTAGGGGCAATGCTGGCTGATCAGGCAGAGGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: LGPKPNPELGAMLADQAEVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...CTCTGCCTGATCAGCCAGCATTGCCCCTAGCTCTGGGTTGGGCTTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
ENST00000583937.5
CDS-3UTR CAA 90 bp CATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HSWPLLTSHPRPLPSSLCAASFF*GDWCWV
Trigger: GACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGC...ACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CCTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PDPQHPRSEMHRKCPPSAAASFF*GDWCWV
Trigger: GACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGC...TGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000462044.5
ENST00000469092.5
CDS-3UTR CAA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCCTGCAGGTCTGTAGTTaGCAGCCTGGGAACCCTCAC +
Preference number: 5 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVLQVCS*QPGNPH
Trigger: GTGAGGGTTCCCAGGCTGCAAACTACAGACCTGCAG...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS-3UTR CAA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGCACCAGTCCCCGGGTaGGTCCTGATGAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCAPVPG*VLMRGA
Trigger: TGCTCCCCTCATCAGGACCAACCCGGGGACTGGTGC...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp TTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCTCTGAGCTTCAGGAGCTaGTGCCTGTTGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: FMAPAHVTPTSTSIITLSLSFRS*CLLSKW
Trigger: CCACTTGGACAACAGGCACAAGCTCCTGAAGCTCAG...AGACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000361254.8
CDS-3UTR CAA 90 bp TTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACAGTCACAGGTTCCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: LHTSALSLSATEGNSHRFLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...GAACCTGTGACTGTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GCATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGAGGACACAGATATCTTaGGGGGCCATTATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: AFMAPAHVTPTSTSIITLRTQIS*GAIIQP
Trigger: GGGCTGAATAATGGCCCCCAAAGATATCTGTGTCCT...CAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: EARSSRSVSMGSSQGVGRAASFF*GDWCCK
Trigger: TTTACAGCACCAGTCACCCAAGAAGAAACTAGCAGC...CCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361254.8
CDS TCA 90 bp TGCAGTACCTTTCTGCTGGTACTTCATCATCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAGCAGCAATATGGTGAAGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: CSTFLLVLHHPPSQE*GGHQKQQQYGEDEG
Trigger: CCCCTCATCTTCACCATATTGCTGCTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGGATGATGAAGTACCAGCAGAAAGGTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361254.8
ENST00000581500.1
CDS-3UTR CAA 90 bp CAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCAAGGCGTGGGCAGGGCTGGGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: QELKISFNGLKSRRGQGWVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...CCAGCCCTGCCCACGCCTTGACTTGAGCCCATTGAAACTGATCTTGAGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDAASFF*GDWCWV
Trigger: GACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGC...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: KVLNLHTSALSLSATEGNLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAAAGGACACAGATATCTTaGGGGGCCATTATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQRTQIS*GAIIQP
Trigger: GGGCTGAATAATGGCCCCCAAAGATATCTGTGTCCT...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp TTCTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTGTTGGACCGGTGATTaGAGTGACAATGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: FSCNSGGQELKISFNGLKCWTGD*SDNGVA
Trigger: GGCTACTCCATTGTCACTCAAATCACCGGTCCAACA...CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CACTTTGTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGCTGCTAGTTTCTTCTaGGGTGACTGGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HFVSTSLTFWPLSYEDPCAASFF*GDWCWV
Trigger: GACCCAGCACCAGTCACCCAAGAAGAAACTAGCAGC...ACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000469092.5
CDS-3UTR CAA 90 bp ATTCATGGCCCCTGCTCACGTCACACCCACGTCCACTTCCATCATCACTTTGTCGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: IHGPCSRHTHVHFHHHFVVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...GACAAAGTGATGATGGAAGTGGACGTGGGTGTGACGTGAGCAGGGGCCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATAGGACACAGATATCTTaGGGGGCCATTATTCAGCCC +
Preference number: 5 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDRTQIS*GAIIQP
Trigger: GGGCTGAATAATGGCCCCCAAAGATATCTGTGTCCT...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTCCTGCAATTCTGGAGGCCAGGAGCTCAAGATCAGTTTCAATGGGCTCAAGTCTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LLQFWRPGAQDQFQWAQVFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...GACTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp CTGATCCTCAGCACCCAAGGTCAGAGATGCATAGGAAATGTCCTCCTTCGGCAATTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LILSTQGQRCIGNVLLRQFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...TTGCCGAAGGAGGACATTTCCTATGCATCTCTGACCTTGGGTGCTGAGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301573.13
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp AATAACCTCTCTATCTCAAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTTCGTGGTAGCCTTTaGCGGGGAGGTTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: NNLSISKSLTYIHLHCPFLRGSL*RGGSGQ
Trigger: CTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAG...AAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTTGAGATAGAGAGGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTCTGAGCTTCAGGAGCTaGTGCCTGTTGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: DILGPPESARITSLSQSPLSFRS*CLLSKW
Trigger: CCACTTGGACAACAGGCACAAGCTCCTGAAGCTCAG...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326165.11
ENST00000361254.8
CDS-3UTR CAA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACTGTTGGACCGGTGATTaGAGTGACAATGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: KVLNLHTSALSLSATEGNCWTGD*SDNGVA
Trigger: GGCTACTCCATTGTCACTCAAATCACCGGTCCAACA...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GTCTCTACCTCTTTGACCTTCTGGCCTCTTTCTTATGAGGACCCTTGTGGTGATGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: VSTSLTFWPLSYEDPCGDVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...ATCACCACAAGGGTCCTCATAAGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp AAAGTCCTTAACTTACATACATCTGCACTGTCCCTTTCTGCCACAGAAGGTAACTTTGTCTCTACCTCTTaGACCTTCTGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KVLNLHTSALSLSATEGNFVSTS*TFWPLS
Trigger: AGAAAGAGGCCAGAAGGTCAAAGAGGTAGAGACAAA...GTTACCTTCTGTGGCAGAAAGGGACAGTGCAGATGTATGTAAGTTAAGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS-3UTR CAA 90 bp GATATTTTGGGCCCACCTGAATCAGCAAGAATAACCTCTCTATCTCAAAGTCCTGTTTTAACAAGGATCTaGCAGTCACGCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: DILGPPESARITSLSQSPVLTRI*QSRQIA
Trigger: AGCTATTTGGCGTGACTGCAAGATCCTTGTTAAAAC...AGGACTTTGAGATAGAGAGGTTATTCTTGCTGATTCAGGTGGGCCCAAAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000469092.5
CDS GCA 72 bp TCAACCTGGGCAGAGGAAAGCTTCGTGGTAGCCTTTTaGGGGGAGGTTCCGGCCAGCTGCAGGGTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: STWAEESFVVAF*GEVPASCRVRS
Trigger: AGACCTGACCCTGCAGCTGGCCGGAACCTCCCCGCAAAAGGCTACCACGAAGCTTTCCTCTGCCCAGGTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000464910.5
ENST00000469092.5
ENST00000581500.1
ENST00000583937.5
CDS GCA 72 bp AGTTGGGGAGCTGCTAGTTTCTTCTTGGGTGACTGGTaGTGTAAACGTAGTGGAGGTAGGCGTGGTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SWGAASFFLGDW*CKRSGGRRGGG
Trigger: GCCCCCACCACGCCTACCTCCACTACGTTTACAGCACCAGTCACCCAAGAAGAAACTAGCAGCTCCCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361254.8
ENST00000581500.1
ENST00000583937.5
CDS CCA 72 bp GCATCTTCTCTTCAGACAGGTCCCCGTTCCCCTCAGTaGAGCCTGGCAGCAGGAACAAACTACAGACTCCCA +
Preference number: 6 (lower is better)
Translates to: ASSLQTGPRSPQ*SLAAGTNYRLP
Trigger: TGGGAGTCTGTAGTTTGTTCCTGCTGCCAGGCTCCACTGAGGGGAACGGGGACCTGTCTGAAGAGAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301573.13
ENST00000469092.5
ENST00000583937.5
CDS GCA 72 bp AGGAGCTTGTGCCTGATGAGCTGCAGGTCTGTAGTTTaGAGCCTGGGAACCCTCACTCCTGTTGTCCAAGTG +
Preference number: 6 (lower is better)
Translates to: RSLCLMSCRSVV*SLGTLTPVVQV
Trigger: CACTTGGACAACAGGAGTGAGGGTTCCCAGGCTGCAAACTACAGACCTGCAGCTCATCAGGCACAAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301573.13
CDS TCA 72 bp TTTCTGCTGGTACTTCATCATCCTCCAAGCCAAGAGTaGGGCGGCCACCAAAAGCAGCAGCAATATGGTGAA +
Preference number: 6 (lower is better)
Translates to: FLLVLHHPPSQE*GGHQKQQQYGE
Trigger: TTCACCATATTGCTGCTGCTTTTGGTGGCCGCCTCACTCTTGGCTTGGAGGATGATGAAGTACCAGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301573.13
ENST00000326165.11
ENST00000361254.8
ENST00000464910.5
ENST00000581500.1
ENST00000583937.5
CDS CCA 72 bp AATGCCTTTGAAGTTGATCAAAACAGCAACGGCAACTaGTCTCCATGTGCTGAGAGCCAGAAGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: NAFEVDQNSNGN*SPCAESQKRSR
Trigger: CCTGCTCCTCTTCTGGCTCTCAGCACATGGAGACCAGTTGCCGTTGCTGTTTTGATCAACTTCAAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469092.5
CDS CAA 72 bp TGTTGGACCGGTGATTTGAGTGACAATGGAGTAGCCTaGACTCTTAGCACTGATGACCCTCATGAGGTCGAG +
Preference number: 6 (lower is better)
Translates to: CWTGDLSDNGVA*TLSTDDPHEVE
Trigger: CTCGACCTCATGAGGGTCATCAGTGCTAAGAGTCAAGGCTACTCCATTGTCACTCAAATCACCGGTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343125.8
ENST00000361254.8
ENST00000462044.5
ENST00000464910.5
ENST00000469092.5
ENST00000581500.1