Pregenerated sensors for CD300LD (Homo sapiens)
Ensembl gene IDs: ENSG00000204345Ensembl transcript IDs: ENST00000375352.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGGTAATCCCACCACTTTaGGAGGCGAAGCGGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GLGGCSLKLGPALPLEPQVIPPL*EAKRED Trigger: ATCCTCCCGCTTCGCCTCCCAAAGTGGTGGGATTAC...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTGAGGGCCTTTCGCCCTaGACAGGACGTCAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VPLGGNTFFSCFLLHWRPEGLSP*TGRQWA Trigger: TGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTC...AGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR TCA 90 bp | CTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGAGGCAGGAGGATCGCTTaGGCCTGGGAGGGGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: LSGETHSSHVFYCIGDLRGRRIA*AWEGKV Trigger: AACTTTCCCCTCCCAGGCTCAAGCGATCCTCCTGCC...TCTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CCA 90 bp | CTAGAACCACAGTCAATTCCCCATAGAAATGTTGTTTTTCTGCCAGGTGCGGTGAGTTCGAGACCAGCCTaGGCAACGTGGTGGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LEPQSIPHRNVVFLPGAVSSRPA*ATWWKP Trigger: GGGCTTCCACCACGTTGCCCAGGCTGGTCTCGAACT...CACCGCACCTGGCAGAAAAACAACATTTCTATGGGGAATTGACTGTGGTTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGGACGTCAATGGGCATTaGGACTCTCATCATCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLGGNTFFSCFLLHWRPQDVNGH*DSHHRA Trigger: AGCCCGATGATGAGAGTCCCAATGCCCATTGACGTC...CTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCAGGGGAAAGTTGCAGTaGGCAGAGATTACACCATTG | + |
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Preference number: 2 (lower is better) Translates to: GASRGKHILLMFSTALETRGKLQ*AEITPL Trigger: CAATGGTGTAATCTCTGCTCACTGCAACTTTCCCCT...GGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CCA 90 bp | CTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGATGGACAGGACGTCAATaGGCATTGGGACTCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: LSGETHSSHVFYCIGDLRWTGRQ*ALGLSS Trigger: TGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCA...TCTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCCAGCTACTCTGGAGGTaGAGGCAGGAGGATCGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GCSLKLGPALPLEPQSIPQLLWR*RQEDRL Trigger: CAAGCGATCCTCCTGCCTCAACCTCCAGAGTAGCTG...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCAAGCGGGAGGATCTCTaGAGGTCAAGAGTTCGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GCSLKLGPALPLEPQSIPKREDL*RSRVRD Trigger: GTCTCGAACTCTTGACCTCAAGAGATCCTCCCGCTT...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | GGTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTGTAATCCCACCACTTaGGGAGGCGAAGCGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: GASRGKHILLMFSTALETCNPTT*GGEAGG Trigger: TCCTCCCGCTTCGCCTCCCAAAGTGGTGGGATTACA...GGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTCTAGAACCACAGTCAATTCCCCATAGAAATGTTGTTTTTCTGCCAGGTGGACGTCAATGGGCATaGGGACTCTCATCATCGGGC | + |
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Preference number: 3 (lower is better) Translates to: LPLEPQSIPHRNVVFLPGGRQWA*GLSSSG Trigger: GCCCGATGATGAGAGTCCCAATGCCCATTGACGTCC...ACCTGGCAGAAAAACAACATTTCTATGGGGAATTGACTGTGGTTCTAGAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGGCAGAGATTACACCATaGCATTCCAGCCTGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PLGGNTFFSCFLLHWRPQAEITP*HSSLGD Trigger: GTCACCCAGGCTGGAATGCAATGGTGTAATCTCTGC...CTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR CCA 72 bp | GGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTaGAGACCTCAGAAGGAAGAAGGGCTCTGTCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: GGNTFFSCFLLH*RPQKEEGLCQA Trigger: GGCCTGACAGAGCCCTTCTTCCTTCTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCATTCCCCATAGAAATGTaGTTTTTCTGCCAGGTGCGG | + |
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Preference number: 3 (lower is better) Translates to: ASRGKHILLMFSTALETSFPIEM*FFCQVR Trigger: CCGCACCTGGCAGAAAAACAACATTTCTATGGGGAA...TGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCGGCAGGAGGATCGCTTaGGCCTGGGAGGGGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GLSPWTGRQWALGLSSSGGRRIA*AWEGKV Trigger: AACTTTCCCCTCCCAGGCTCAAGCGATCCTCCTGCC...GCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTGACTCCTCCTCCGGACGGTCCCCAGCATaGTCAGGAGCAGAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GQDVNGHWDSHHRADSSSGRSPA*SGAEAA Trigger: AGCTGCCTCTGCTCCTGAGCATGCTGGGGACCGTCC...GGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCGAGGGCCTTTCGCCCTaGACAGGACGTCAATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGGPFALDRTSMGIGTLIEGLSP*TGRQWA Trigger: TGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTC...GATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGAGTTCGAGACCAGCCTaGGCAACGTGGTGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GLGGCSLKLGPALPLEPQSSRPA*ATWWKP Trigger: GGGCTTCCACCACGTTGCCCAGGCTGGTCTCGAACT...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTCTCTCCTCTCCTTGGTaGTCACAGGTGTCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: AFRPGQDVNGHWDSHHRALSSPW*SQVSGA Trigger: GGCACCAGACACCTGTGATCACCAAGGAGAGGAGAG...AGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTGGGCTGCTGGTCTTCTaGGTGGCTGCAGCTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: AFRPGQDVNGHWDSHHRAGLLVF*VAAAVK Trigger: TTTCACAGCTGCAGCCACCCAGAAGACCAGCAGCCC...AGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCAACAGGAACAGGAAGTaGGTGCTCTTGAGCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VGGPFALDRTSMGIGTLINRNRK*VLLSGD Trigger: GTCCCCGCTCAAGAGCACCCACTTCCTGTTCCTGTT...GATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTGCCCTTCAGGGACTTaGATCCAAGCTCGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GLGGCSLKLGPALPLEPQCPSGT*IQARKS Trigger: TGACTTCCGAGCTTGGATTCAAGTCCCTGAAGGGCA...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCGTAATCCCACCACTTTaGGAGGCGAAGCGGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GCSLKLGPALPLEPQSIPVIPPL*EAKRED Trigger: ATCCTCCCGCTTCGCCTCCCAAAGTGGTGGGATTAC...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCTGTGGTTGTCCATTCTaGGACTGCAGTTTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GCSLKLGPALPLEPQSIPCGCPF*DCSLCA Trigger: GGCACACAAACTGCAGTCTCAGAATGGACAACCACA...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTGTGAAAGCCAGGCTTaGTGTTGTGGTTGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: GLGGCSLKLGPALPLEPQCESQA*CCGCPF Trigger: GAATGGACAACCACAACAGCAAGCCTGGCTTTCACA...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCCAGAGATTACACCATTaGATTCCAGCCTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: GCSLKLGPALPLEPQSIPQRLHH*IPAWVT Trigger: TGTCACCCAGGCTGGAATGCAATGGTGTAATCTCTG...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAAGGCCCCAGGGACTGTaGAGAGAAGGGAATAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ASRGKHILLMFSTALETSRPQGL*REGNSP Trigger: GGGGCTATTCCCTTCTCTGCACAGTCCCTGGGGCCT...TGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATGCAGTTTGTGTGCCTaGGTTAATGGTCACTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: WEGLSPWTGRQWALGLSSCSLCA*VNGHLN Trigger: GTTCAAGTGACCATTAACCCAGGCACACAAACTGCA...TGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTTTTCTGATTGTCCCTaGTGGAAACTCGATTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLGGCSLKLGPALPLEPQFSDCP*WKLDSS Trigger: AGAAGAATCGAGTTTCCATCAGGGACAATCAGAAAA...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTGGTCTTCTGGGTGGCTaGAGCTGTGAAAGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPLGGNTFFSCFLLHWRPGLLGG*SCESQA Trigger: AGCCTGGCTTTCACAGCTGCAGCCACCCAGAAGACC...AGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCTCTCATGTTTTCTACTaGATTGGAGACCTCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GCSLKLGPALPLEPQSIPSHVFY*IGDLRR Trigger: CCTTCTGAGGTCTCCAATGCAGTAGAAAACATGAGA...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCTGTTTTCTACTGCATTaGAGACCTCAGAAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VGGPFALDRTSMGIGTLICFLLH*RPQKEE Trigger: TTCTTCCTTCTGAGGTCTCCAATGCAGTAGAAAACA...GATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | CCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGCTCTCATCATCGGGCTaGCTCCTCCTCCTTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: PLGGNTFFSCFLLHWRPQLSSSG*LLLLQD Trigger: GTCTTGAAGGAGGAGGAGTCAGCCCGATGATGAGAG...CTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCCACTACGGCATAGGTaGCTCTCGGGGGAAACACAT | + |
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Preference number: 4 (lower is better) Translates to: VPLGGNTFFSCFLLHWRPPLRHR*LSGETH Trigger: ATGTGTTTCCCCCGAGAGGCACCTATGCCGTAGTGG...AGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | CCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGGGCAATGGAGTAACCTaGGAGGATGAGAAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PLGGNTFFSCFLLHWRPQGNGVT*EDEKQQ Trigger: CTGCTGCTTCTCATCCTCCCAGGTTACTCCATTGCC...CTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTGACGTCAATGGGCATTaGGACTCTCATCATCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPLGGNTFFSCFLLHWRPDVNGH*DSHHRA Trigger: AGCCCGATGATGAGAGTCCCAATGCCCATTGACGTC...AGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR GCA 90 bp | GCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTTTCTTCTTTACCTCCTaGTCTGATCCATTTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: AFRPGQDVNGHWDSHHRAFFFTS*SDPFVL Trigger: TAAAACAAATGGATCAGAGCAGGAGGTAAAGAAGAA...AGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CCA 90 bp | GCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCATGGACAGGACGTCAATaGGCATTGGGACTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: ASRGKHILLMFSTALETSWTGRQ*ALGLSS Trigger: TGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCA...TGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | AGGTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCAGCATCATCTCTTTTaGGATTCTCCATGGTCACGG | + |
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Preference number: 4 (lower is better) Translates to: RCLSGETHSSHVFYCIGDQHHLF*DSPWSR Trigger: CCGTGACCATGGAGAATCTCAAAAGAGATGATGCTG...GTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAAACACGTGGTTTTTCTaGTTGTCCCTGATGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: ASRGKHILLMFSTALETSNTWFF*LSLMET Trigger: AGTTTCCATCAGGGACAATCAGAAAAACCACGTGTT...TGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR TCA 90 bp | GGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGAAGGAAAGGGGAAAGTTGCAGTaGGCAGAGATTACACCATTG | + |
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Preference number: 4 (lower is better) Translates to: GGNTFFSCFLLHWRPQKERGKLQ*AEITPL Trigger: CAATGGTGTAATCTCTGCTCACTGCAACTTTCCCCT...TTCCTTCTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTCAATTCCCAGGAAGTGGGTGCTCTaGAGCGGGGACCTGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GCSLKLGPALPLEPQSIPRKWVL*SGDLVR Trigger: CCTCACCAGGTCCCCGCTCAAGAGCACCCACTTCCT...GGGAATTGACTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGTGTAATCCCACCACTTaGGGAGGCGAAGCGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GLGGCSLKLGPALPLEPQCNPTT*GGEAGG Trigger: TCCTCCCGCTTCGCCTCCCAAAGTGGTGGGATTACA...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCGTGCCCTTCAGGGACTaGAATCCAAGCTCGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GLSPWTGRQWALGLSSSGVPFRD*NPSSEV Trigger: GACTTCCGAGCTTGGATTCAAGTCCCTGAAGGGCAC...GCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS CCA 90 bp | TTCTGTGGGAGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTaGGACTCTCATCATCGGGCTGACTCCTCCTCCTTCAAGACCTTC | + |
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Preference number: 5 (lower is better) Translates to: FCGRAFRPGQDVNGH*DSHHRADSSSFKTF Trigger: GAAGGTCTTGAAGGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCTCCCACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGGCAGAGATTACACCATaGCATTCCAGCCTGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GLGGCSLKLGPALPLEPQAEITP*HSSLGD Trigger: GTCACCCAGGCTGGAATGCAATGGTGTAATCTCTGC...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGACTAGGAGGCTGTTCCCTGAAGCTGGGGCCAGCACTGCCTCTAGAACCACAGAAGCGGGAGGATCTCTaGAGGTCAAGAGTTCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: GLGGCSLKLGPALPLEPQKREDL*RSRVRD Trigger: GTCTCGAACTCTTGACCTCAAGAGATCCTCCCGCTT...CTGTGGTTCTAGAGGCAGTGCTGGCCCCAGCTTCAGGGAACAGCCTCCTAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS TCA 90 bp | CCCTGGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTaGCTCCTCCTCCTTCAAGACCTTCTTTGTGGTCTGTTTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: PWTGRQWALGLSSSG*LLLLQDLLCGLFTQ Trigger: CTGGGTAAACAGACCACAAAGAAGGTCTTGAAGGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGACAGGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTGACTCCTCCTCCCCTTCAAGACCTTCTTaGTGGTCTGTTTACCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GQDVNGHWDSHHRADSSSPSRPS*WSVYPE Trigger: CTCTGGGTAAACAGACCACAAAGAAGGTCTTGAAGG...GGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | CTAGAACCACAGTCAATTCCCCATAGAAATGTTGTTTTTCTGCCAGGTGCGGTGGGACGTCAATGGGCATaGGGACTCTCATCATCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LEPQSIPHRNVVFLPGAVGRQWA*GLSSSG Trigger: GCCCGATGATGAGAGTCCCAATGCCCATTGACGTCC...CACCGCACCTGGCAGAAAAACAACATTTCTATGGGGAATTGACTGTGGTTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | AGGTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACGGCTTGCTGTTGTGGTaGTCCATTCTGAGACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RCLSGETHSSHVFYCIGDGLLLW*SILRLQ Trigger: CTGCAGTCTCAGAATGGACAACCACAACAGCAAGCC...GTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GTGCCTCTCGGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTTTCCCCATAGAAATGTaGTTTTTCTGCCAGGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: VPLGGNTFFSCFLLHWRPFPIEM*FFCQVR Trigger: CCGCACCTGGCAGAAAAACAACATTTCTATGGGGAA...AGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCCGAGAGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | GGGGGAAACACATTCTTCTCATGTTTTCTACTGCATTGGAGACCTCAGAAGGAAAAGCCAGGCTTGCTGTaGTGGTTGTCCATTCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: GGNTFFSCFLLHWRPQKEKPGLL*WLSILR Trigger: TCTCAGAATGGACAACCACAACAGCAAGCCTGGCTT...TTCCTTCTGAGGTCTCCAATGCAGTAGAAAACATGAGAAGAATGTGTTTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTCTAGAACCACAGTCAATTCCCCATAGAAATGTTGTTTTTCTGCCAGGTTGGGTTAATGGTCACTaGAACTTTGACCCCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: LPLEPQSIPHRNVVFLPGWVNGH*NFDPKI Trigger: GATCTTGGGGTCAAAGTTCAAGTGACCATTAACCCA...ACCTGGCAGAAAAACAACATTTCTATGGGGAATTGACTGTGGTTCTAGAGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTCTAGAACCACAGTCAATTCCCCATAGAAATGTTGTTTTTCTGCCAGGTATGTTTTCTACTGCATaGGAGACCTCAGAAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LPLEPQSIPHRNVVFLPGMFSTA*ETSEGR Trigger: TCTTCCTTCTGAGGTCTCCAATGCAGTAGAAAACAT...ACCTGGCAGAAAAACAACATTTCTATGGGGAATTGACTGTGGTTCTAGAGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS CCA 72 bp | AGGGCCTTTCGCCCTGGACAGGACGTCAATGGGCATTaGGACTCTCATCATCGGGCTGACTCCTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RAFRPGQDVNGH*DSHHRADSSSF Trigger: GAAGGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCCTGTCCAGGGCGAAAGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS TCA 72 bp | GGACGTCAATGGGCATTGGGACTCTCATCATCGGGCTaGCTCCTCCTCCTTCAAGACCTTCTTTGTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRQWALGLSSSG*LLLLQDLLCGL Trigger: CAGACCACAAAGAAGGTCTTGAAGGAGGAGGAGTCAGCCCGATGATGAGAGTCCCAATGCCCATTGACGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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| CDS TCA 72 bp | TGTGAAAGCCAGGCTTGCTGTTGTGGTTGTCCATTCTaGGACTGCAGTTTGTGTGCCTGGGTTAATGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: CESQACCCGCPF*DCSLCAWVNGH Trigger: GTGACCATTAACCCAGGCACACAAACTGCAGTCTCAGAATGGACAACCACAACAGCAAGCCTGGCTTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375352.1 |
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