Pregenerated sensors for CD2AP-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270761Ensembl transcript IDs: ENST00000604014.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGGGCCTGGCAGCATCTGGGCCTCCCTTAAAGGTCGAAATCAAGTaGGCTCGCCCTCCTTCTGTCCGCCTTTTCCCTTTAAGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RGLAASGPPLKVEIK*ARPPSVRLFPLRSS Trigger: CGAGGACCTTAAAGGGAAAAGGCGGACAGAAGGAGGGCGAGCGCACTTGATTTCGACCTTTAAGGGAGGCCCAGATGCTGCCAGGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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| CDS CCA 90 bp | GCTGCTTCGCTGCAGAAAGTAACTCCGCGTCGCCGCCGCGGAAAGTaGGGCAACTTTGCCTATCAGCAGAAACCTTTTGATCCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AASLQKVTPRRRRGK*GNFAYQQKPFDPSE Trigger: CTCAGATGGATCAAAAGGTTTCTGCTGATAGGCAAAGTTGCCCCACTTTCCGCGGCGGCGACGCGGAGTTACTTTCTGCAGCGAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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| CDS CAA 90 bp | GCCGCCGCGGAAAGTGGGGCAACTTTGCCTATCAGCAGAAACCTTTaGATCCATCTGAGGCGACAAACCAGACCAAACGCCCGCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAESGATLPISRNL*IHLRRQTRPNARPS Trigger: GCTTGGGCGGGCGTTTGGTCTGGTTTGTCGCCTCAGATGGATCAAAAGGTTTCTGCTGATAGGCAAAGTTGCCCCACTTTCCGCGGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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| CDS GCA 72 bp | GCAGCATCTGGGCCTCCCTTAAAGGTCGAAATCAAGTaGGCTCGCCCTCCTTCTGTCCGCCTTTTCCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AASGPPLKVEIK*ARPPSVRLFPL Trigger: TAAAGGGAAAAGGCGGACAGAAGGAGGGCGAGCGCACTTGATTTCGACCTTTAAGGGAGGCCCAGATGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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| CDS CCA 72 bp | CTGCAGAAAGTAACTCCGCGTCGCCGCCGCGGAAAGTaGGGCAACTTTGCCTATCAGCAGAAACCTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LQKVTPRRRRGK*GNFAYQQKPFD Trigger: ATCAAAAGGTTTCTGCTGATAGGCAAAGTTGCCCCACTTTCCGCGGCGGCGACGCGGAGTTACTTTCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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| CDS CAA 72 bp | GAAAGTGGGGCAACTTTGCCTATCAGCAGAAACCTTTaGATCCATCTGAGGCGACAAACCAGACCAAACGCC | + |
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Preference number: 6 (lower is better) Translates to: ESGATLPISRNL*IHLRRQTRPNA Trigger: GGCGTTTGGTCTGGTTTGTCGCCTCAGATGGATCAAAAGGTTTCTGCTGATAGGCAAAGTTGCCCCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604014.1 |
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