RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD276 (Homo sapiens)

Ensembl gene IDs: ENSG00000103855

Ensembl transcript IDs: ENST00000318424.9, ENST00000318443.10, ENST00000537340.6, ENST00000557951.1, ENST00000558689.5, ENST00000559073.1, ENST00000559978.1, ENST00000560786.6, ENST00000560928.5, ENST00000560995.5, ENST00000561213.5, ENST00000561260.5, ENST00000561416.5, ENST00000563584.5, ENST00000564751.5, ENST00000567189.5, ENST00000567582.5

Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACGTGTTCCAGCACGTGCACCTGCAGGTCTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: TRVPARAPAGLHAQL*MWWAQSALSSLGAG
Trigger: CCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACATGCACAGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGAACACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
3UTR CCA 90 bp GTTCCAGCACGTGCACCTGCAGGTCTCCATGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAA +
Preference number: 1 (lower is better)
Translates to: VPARAPAGLHAQLCM*WAQSALSSLGAGRE
Trigger: TTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACATGCACAGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
3UTR CCA 90 bp TGCAATGAGACAGACAGACAGCCCCACGGTCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTGCCCTGTGATGGTGACAGAGCCGTG +
Preference number: 1 (lower is better)
Translates to: CNETDRQPHGHPQGL*GECHRLPCDGDRAV
Trigger: CACGGCTCTGTCACCATCACAGGGCAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTGACCGTGGGGCTGTCTGTCTGTCTCATTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560928.5
3UTR GCA 90 bp TTTGGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTCTaGCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: FGSHQSSWDLGYSAL*HLTRGKLRLLFCRG
Trigger: CCCTCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR TCA 90 bp AGGCTGCTCTTCTGCAGAGGGGGCCTCAGGTCACTAGTGAAAGGATaGTGCCTACCCACCCTCTCAGCCTCTCACACACAGATGTGTGCA +
Preference number: 1 (lower is better)
Translates to: RLLFCRGGLRSLVKG*CLPTLSASHTQMCA
Trigger: TGCACACATCTGTGTGTGAGAGGCTGAGAGGGTGGGTAGGCATCATCCTTTCACTAGTGACCTGAGGCCCCCTCTGCAGAAGAGCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR GCA 90 bp TCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGGACAGACATTTTGGACACCACCAGA +
Preference number: 1 (lower is better)
Translates to: SAFSAAMKGPEGLGA*PPAHTWTDILDTTR
Trigger: TCTGGTGGTGTCCAAAATGTCTGTCCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR CCA 90 bp TTAAGCCTCTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTTaGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCT +
Preference number: 1 (lower is better)
Translates to: LSLCRIWVPSEQLGP*LLSPLPSHQGEVEA
Trigger: AGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAGGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CCA 90 bp GGAAGGAGGAATAAACTCCTGTCCTGCTTAAGCCTCTGTCGTATTTaGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: GRRNKLLSCLSLCRI*VPSEQLGPWLLSPL
Trigger: CAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAGGCTTAAGCAGGACAGGAGTTTATTCCTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CCA 90 bp CTAGCCTCCCCTGAGTTAGGGCTCATATGCCTGGGTTCTGACCAATaGAATGTAAGCGGAAGTGATGCAGGCTACTTCCACTCAAGCTCT +
Preference number: 1 (lower is better)
Translates to: LASPELGLICLGSDQ*NVSGSDAGYFHSSS
Trigger: AGAGCTTGAGTGGAAGTAGCCTGCATCACTTCCGCTTACATTCCATTGGTCAGAACCCAGGCATATGAGCCCTAACTCAGGGGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR TCA 90 bp AAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTGTCCCTAAGAAATGTATGTACTGTG +
Preference number: 1 (lower is better)
Translates to: KRQPDGPRSTGRRGW*CGQCTVSLRNVCTV
Trigger: CACAGTACATACATTTCTTAGGGACACAGTACACTGACCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR GCA 90 bp ACCTATGCTCACACTATCACAGGAAGGAGGAATAAACTCCTGTCCTaGTTAAGCCTCTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: TYAHTITGRRNKLLS*LSLCRIWVPSEQLG
Trigger: TCCCAGCTGCTCTGATGGGACCCAAATACGACAGAGGCTTAAGCAGGACAGGAGTTTATTCCTCCTTCCTGTGATAGTGTGAGCATAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CCA 90 bp AGAGGGCAGAATCCAGGTAAGTGGAACCTGGCTCCAGGTCATCAGTaGTTTTACGATTACCTATGCTCACACTATCACAGGAAGGAGGAA +
Preference number: 1 (lower is better)
Translates to: RGQNPGKWNLAPGHQ*FYDYLCSHYHRKEE
Trigger: TTCCTCCTTCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGACCTGGAGCCAGGTTCCACTTACCTGGATTCTGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR TCA 90 bp GTCCCTAAGAAATGTATGTACTGTGAAATAAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTGTGGGTGGTCTGTTCATTGTGTCTA +
Preference number: 1 (lower is better)
Translates to: VPKKCMYCEIRQQAG*LRELRLWVVCSLCL
Trigger: TAGACACAATGAACAGACCACCCACAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCTTATTTCACAGTACATACATTTCTTAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR GCA 90 bp GTGAAGTACCATGCCTGGCCTAAGCTGACACTTTTTATCTCCATCTaGCCAGCTCTTCTATGGTTATTTGATTCTGAAAAACAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: VKYHAWPKLTLFISI*PALLWLFDSEKQEG
Trigger: TCCTTCCTGTTTTTCAGAATCAAATAACCATAGAAGAGCTGGGCAGATGGAGATAAAAAGTGTCAGCTTAGGCCAGGCATGGTACTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAACAGGCAGGAGCCCCCTaGAAACCGCAGGGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQQAGAP*KPQGAV
Trigger: CACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTG...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQAQLCM*WAQSAL
Trigger: CAGGGCACTCTGCGCCCACCACATGCACAGCTGTGC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCCAGCACATGCTTCCGTaGGGAGGATGGGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: AFSAAMKGPEGLGACPPAQHMLP*GGWAGE
Trigger: CTCCCCTGCCCATCCTCCCCACGGAAGCATGTGCTG...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTCCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR GCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGG +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAEGLGA*PPAHTW
Trigger: CCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTC...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCCAGCTGTGCATGTGGTaGGCGCAGAGTGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: AFSAAMKGPEGLGACPPAQLCMW*AQSALS
Trigger: AGACAGGGCACTCTGCGCCCACCACATGCACAGCTG...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPATVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 2 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCATGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPACPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCAGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 2 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 2 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQTCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTACTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSTVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGT...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559073.1
3UTR-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCACAGCACATGCTTCCGTaGGGAGGATGGGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAQHMLP*GGWAGE
Trigger: CTCCCCTGCCCATCCTCCCCACGGAAGCATGTGCTG...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCCATCACAGACCCCTaGAGAACCAGTGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPPITDP*RTSVTS
Trigger: GCTGGTCACACTGGTTCTCCAGGGGTCTGTGATGGG...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCAAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTG +
Preference number: 2 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPRQQAG*LRELRL
Trigger: CAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCT...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR-3UTR TCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRADSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR GCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGCTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRLHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 2 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPTCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGTCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 2 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 2 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGCCCATCACAGACCCCTaGAGAACCAGTGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRPITDP*RTSVTS
Trigger: GCTGGTCACACTGGTTCTCCAGGGGTCTGTGATGGG...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR GCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCATCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRASSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR-3UTR GCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 2 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp CTCTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTTTGAGGCTGCTCTTCTaGAGAGGGGGCCTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: LCRIWVPSEQLGPWLLSPLRLLF*RGGLRS
Trigger: TGACCTGAGGCCCCCTCTGCAGAAGAGCAGCCTCAA...AGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCATGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRACPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR-3UTR CCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGTGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKCPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCGGTAAGAATTATGGGTaGGATGGGGGTGAGGTATCC +
Preference number: 2 (lower is better)
Translates to: AFSAAMKGPEGLGACPPAGKNYG*DGGEVS
Trigger: GGATACCTCACCCCCATCCCACCCATAATTCTTACC...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCATCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAAGTGTGACCAGCACATaGTTCCGTGGGGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPSVTST*FRGEDG
Trigger: CCCATCCTCCCCACGGAAGCATGTGCTGGTCACACT...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp GAGGGCAGAATCCAGGTAAGTGGAACCTGGCTCCAGGTCATCAGTGGTTTTACGGGTTACTCAGCCCTCTaGCATCTCACCAGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: EGRIQVSGTWLQVISGFTGYSAL*HLTRGK
Trigger: CTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACC...CGTAAAACCACTGATGACCTGGAGCCAGGTTCCACTTACCTGGATTCTGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGGTGTATCGCATCCTTTaGAGAAGGAGCCCACCTGTC +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRVYRIL*RRSPPV
Trigger: GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACAC...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 2 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 2 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR TCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 2 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGTCACTAGTGAAAGGATaGTGCCTACCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: WLLSPLPSHQGEVEAALLSLVKG*CLPTLS
Trigger: TGAGAGGGTGGGTAGGCATCATCCTTTCACTAGTGA...CAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR GCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATCCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR GCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGCCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 2 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAAAAAAGGCAGCCAGATaGTCCACGCAGCACTGGAAG +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAKKAAR*STQHWK
Trigger: CTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR TCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR GCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 2 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 2 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTTGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 2 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAAAGGCAGCCAGATaGTCCACGCAGCACTGGAAG +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRKKAAR*STQHWK
Trigger: CTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAAAGGCAGCCAGATaGTCCACGCAGCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRKKAAR*STQHCQ
Trigger: CTGACAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000559073.1
3UTR-3UTR TCA 90 bp AGGGGTAGCAGCTCCCTGGTCCTCATGGTCAGGCTATTTCTTGTCCATCATCTTGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 2 (lower is better)
Translates to: RGSSSLVLMVRLFLVHHLGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...AAGATGATGGACAAGAAATAGCCTGACCATGAGGACCAGGGAGCTGCTACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560928.5
3UTR-3UTR TCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR GCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR GCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCAATAAACTCCTGTCCTaGTTAAGCCTCTGTCGTATT +
Preference number: 2 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPNKLLS*LSLCRI
Trigger: AATACGACAGAGGCTTAAGCAGGACAGGAGTTTATT...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 2 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAGAGGGTGGTGATGTaGTCAGTGTACTGTGTCCCT +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRKRVVM*SVYCVP
Trigger: AGGGACACAGTACACTGACCACATCACCACCCTCTT...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR CAA 90 bp GGAGGAAGGAGGGGAAAGGAAACAGCTTCTAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAG +
Preference number: 2 (lower is better)
Translates to: GGRRGKETASRLQEM*RPHCPCLRRKDSMQ
Trigger: CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGTTTCCTTTCCCCTCCTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR TCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 2 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR TCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 2 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR TCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDEMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR GCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGACTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGLHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR TCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRREMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TGGCTCCAGGTCATCAGTGGTTTTACGATTACCTATGCTCACACTATCACAGGATCCCATCAGAGCAGCTaGGACCTTGGTTACTCAGCC +
Preference number: 2 (lower is better)
Translates to: WLQVISGFTITYAHTITGSHQSS*DLGYSA
Trigger: GGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGA...TCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGACCTGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR TCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFEMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 2 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 2 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR TCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR TCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDEMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR TCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR GCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCAGTGTGACCAGCACATaGTTCCGTGGGGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSSVTST*FRGEDG
Trigger: CCCATCCTCCCCACGGAAGCATGTGCTGGTCACACT...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 2 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAAAGAGGGTGGTGATGTaGTCAGTGTACTGTGTCCCT +
Preference number: 2 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGKRVVM*SVYCVP
Trigger: AGGGACACAGTACACTGACCACATCACCACCCTCTT...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR GCA 90 bp TTATCTCCATCTGCCCAGCTCTTCTATGGTTATTTGATTCTGAAAAACAGGAAGACTAACCACCCACTGTaGGCCAGGGACATGGCTACC +
Preference number: 2 (lower is better)
Translates to: LSPSAQLFYGYLILKNRKTNHPL*ARDMAT
Trigger: GGTAGCCATGTCCCTGGCGCACAGTGGGTGGTTAGT...CTTCCTGTTTTTCAGAATCAAATAACCATAGAAGAGCTGGGCAGATGGAGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 2 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 2 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR TCA 90 bp GACCTATCTCCTGTATTTCCAAATGTCATCACTGACATTATAACAATAGGCCCACATATGCCTGGGTTCTaGCCAATGGAATGTAAGCGG +
Preference number: 2 (lower is better)
Translates to: DLSPVFPNVITDIITIGPHMPGF*PMECKR
Trigger: CCGCTTACATTCCATTGGTCAGAACCCAGGCATATG...TGGGCCTATTGTTATAATGTCAGTGATGACATTTGGAAATACAGGAGATAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCAATAAGGCTGCACAGTaGTCTGTGTATCGCATCCTT +
Preference number: 2 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSNKAAQ*SVYRIL
Trigger: AAGGATGCGATACACAGACCACTGTGCAGCCTTATT...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR CCA 72 bp GTGCCCACTAGGGCCACCACCGGGTCCTCAGGGACCTaGACCTCCACGGCTCCTGTGGGGCTTCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: VPTRATTGSSGT*TSTAPVGLLWG
Trigger: ACCCCAGAGAAGCCCCACAGGAGCCGTGGAGGTCCAGGTCCCTGAGGACCCGGTGGTGGCCCTAGTGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560928.5
3UTR GCA 72 bp CACACGTGTTCCAGCACGTGCACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTGGGCGCAGAGTGCCCT +
Preference number: 3 (lower is better)
Translates to: HTCSSTCTCRSP*TAVHVVGAECP
Trigger: AGGGCACTCTGCGCCCACCACATGCACAGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGAACACGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
3UTR CCA 72 bp CGTGCACCTGCAGGTCTCCATGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: RAPAGLHAQLCM*WAQSALSSLGA
Trigger: TGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACATGCACAGCTGTGCATGGAGACCTGCAGGTGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
3UTR CCA 72 bp ACAGACAGACAGCCCCACGGTCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTGCCCTGTGATGGTGAC +
Preference number: 3 (lower is better)
Translates to: TDRQPHGHPQGL*GECHRLPCDGD
Trigger: GTCACCATCACAGGGCAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTGACCGTGGGGCTGTCTGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560928.5
3UTR GCA 72 bp TCTCCATGCACAGCTGTGCATGTGGTGGGCGCAGAGTaGCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGC +
Preference number: 3 (lower is better)
Translates to: SPCTAVHVVGAE*PVFTWGREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACATGCACAGCTGTGCATGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
3UTR-3UTR CAA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 3 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CAA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: AFSAAMKGPEGLGACPPARLQEM*RPHCPC
Trigger: ACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCT...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CAA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGCACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGCACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CAA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGTGCCCTGTCTTCACTaGGGGCAGGGAGGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDVPCLH*GQGGKR
Trigger: CCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCAC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR TCA 72 bp GTTAGTTGTCTGTCTCCCAGCTGGATGGGGAGTCCTTaGGGGAGGAACTTTATCTTCCCACGCAGGGCCCCC +
Preference number: 3 (lower is better)
Translates to: VSCLSPSWMGSP*GRNFIFPRRAP
Trigger: GGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCCAGCTGGGAGACAGACAACTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR GCA 72 bp TCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGGACAGACATTTTGGAC +
Preference number: 3 (lower is better)
Translates to: SAAMKGPEGLGA*PPAHTWTDILD
Trigger: GTCCAAAATGTCTGTCCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR GCA 72 bp CATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTCTaGCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: HQSSWDLGYSAL*HLTRGKLRLLF
Trigger: GAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CAA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAACTGGATGGGGAGTCCTaGAGGGAGGAACTTTATCTT +
Preference number: 3 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQLDGES*REELYL
Trigger: AAGATAAAGTTCCTCCCTCAAGGACTCCCCATCCAG...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
3UTR TCA 72 bp TTCTGCAGAGGGGGCCTCAGGTCACTAGTGAAAGGATaGTGCCTACCCACCCTCTCAGCCTCTCACACACAG +
Preference number: 3 (lower is better)
Translates to: FCRGGLRSLVKG*CLPTLSASHTQ
Trigger: CTGTGTGTGAGAGGCTGAGAGGGTGGGTAGGCATCATCCTTTCACTAGTGACCTGAGGCCCCCTCTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CCA 72 bp TGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTTaGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAA +
Preference number: 3 (lower is better)
Translates to: CRIWVPSEQLGP*LLSPLPSHQGE
Trigger: TTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CAA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 3 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGTGTGTATCGCATCCTTaGGAGAAGGAGCCCACCTGT +
Preference number: 3 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRCVSHP*EKEPTC
Trigger: ACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACA...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 3 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR-3UTR CAA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 3 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 3 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
3UTR-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTGTGTATCGCATCCTTaGGAGAAGGAGCCCACCTGT +
Preference number: 3 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDCVSHP*EKEPTC
Trigger: ACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACA...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACTTAGAGAACTAAGGTaGTGGGTGGTCTGTTCATTG +
Preference number: 3 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPLRELR*WVVCSL
Trigger: CAATGAACAGACCACCCACAACCTTAGTTCTCTAAG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
3UTR CCA 72 bp GGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTaGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCA +
Preference number: 3 (lower is better)
Translates to: GNHVHWRNKAAQ*SVYRILWRRSP
Trigger: TGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR CCA 72 bp AATAAACTCCTGTCCTGCTTAAGCCTCTGTCGTATTTaGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTC +
Preference number: 3 (lower is better)
Translates to: NKLLSCLSLCRI*VPSEQLGPWLL
Trigger: GAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAGGCTTAAGCAGGACAGGAGTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR-3UTR CAA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCTTAGAGAACTAAGGTaGTGGGTGGTCTGTTCATTG +
Preference number: 3 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFLRELR*WVVCSL
Trigger: CAATGAACAGACCACCCACAACCTTAGTTCTCTAAG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR-3UTR CAA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 3 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR CCA 72 bp AATCCAGGTAAGTGGAACCTGGCTCCAGGTCATCAGTaGTTTTACGATTACCTATGCTCACACTATCACAGG +
Preference number: 3 (lower is better)
Translates to: NPGKWNLAPGHQ*FYDYLCSHYHR
Trigger: CCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGACCTGGAGCCAGGTTCCACTTACCTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CCA 72 bp GAAGTTGAAGAGGGCAGAATCCAGGTAAGTGGAACCTaGCTCCAGGTCATCAGTGGTTTTACGATTACCTAT +
Preference number: 3 (lower is better)
Translates to: EVEEGRIQVSGT*LQVISGFTITY
Trigger: ATAGGTAATCGTAAAACCACTGATGACCTGGAGCCAGGTTCCACTTACCTGGATTCTGCCCTCTTCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR TCA 72 bp AAATGTATGTACTGTGAAATAAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTGTGGGTGGTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: KCMYCEIRQQAG*LRELRLWVVCS
Trigger: TGAACAGACCACCCACAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCTTATTTCACAGTACATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
3UTR GCA 72 bp CATGCCTGGCCTAAGCTGACACTTTTTATCTCCATCTaGCCAGCTCTTCTATGGTTATTTGATTCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: HAWPKLTLFISI*PALLWLFDSEK
Trigger: TTTTTCAGAATCAAATAACCATAGAAGAGCTGGGCAGATGGAGATAAAAAGTGTCAGCTTAGGCCAGGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAACTGGGCTCCCCGTGGTaGAAGGCTGCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQLGSPW*KAAPAA
Trigger: CGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAG...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCGAAAGGCGGCTCCGGTaGGTCCCTGAGGCCGGATTG +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPERRLR*VPEAGL
Trigger: CAATCCGGCCTCAGGGACGCACCGGAGCCGCCTTTC...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537340.6
CDS-3UTR CCA 90 bp AGCAGCTGGGACCTTGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGCTGGGCTCCCCGTGGTaGAAGGCTGCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSWDLGYSALCHLTRGKLLGSPW*KAAPAA
Trigger: CGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAG...CAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACAGCTGGGCTCCCCGTaGTGGAAGGCTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAQLGSP*WKAAPA
Trigger: GGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTG...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQEGLGA*PPAHTW
Trigger: CCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCATCCAGAGGGCCTTGGTaGCTGCCCACCTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPSRGPW*LPTCPH
Trigger: GTGTGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGA...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TGCAGCCAGAGGGTAGGAGCTGTAGGGAGGGGTAGCAGCTCCCTGGTCCTCATGGCGCTGCCCTGGTCCTaGCCCTCAGCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CSQRVGAVGRGSSSLVLMALPWS*PSAKLC
Trigger: GCACAGCTTTGCTGAGGGCCAGGACCAGGGCAGCGC...CATGAGGACCAGGGAGCTGCTACCCCTCCCTACAGCTCCTACCCTCTGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCACCTCCAGGGCTCCTGTaGGGCAGAACCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPPPGLL*GRTTVL
Trigger: GAGCACTGTGGTTCTGCCTCACAGGAGCCCTGGAGG...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTCCACATGCACACCCATaGCAGGGCTGCCCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSPHAHP*QGCPAD
Trigger: GTCGGCGGGGCAGCCCTGGCATGGGTGTGCATGTGG...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp TGCAGCCAGAGGGTAGGAGCTGTAGGGAGGGGTAGCAGCTCCCTGGTCCTCATGGTGGTGGGCGCAGAGTaGCCTGTCTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSQRVGAVGRGSSSLVLMVVGAE*PVFTWG
Trigger: GCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCAC...CATGAGGACCAGGGAGCTGCTACCCCTCCCTACAGCTCCTACCCTCTGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCGGGTCCTCAGGGACCTaGACCTCCACGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPGSSGT*TSTAPV
Trigger: CACAGGAGCCGTGGAGGTCCAGGTCCCTGAGGACCC...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGCTCCGGTGCGTCCCTaGGGCCGGATTGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPAPVRP*GRIGPA
Trigger: CGCGGGGCCAATCCGGCCTCAGGGACGCACCGGAGC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537340.6
CDS-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGTGGTGGGCGCAGAGTaGCCTGTCTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAVVGAE*PVFTWG
Trigger: GCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCAC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGTGGTGGGCGCAGAGTaGCCTGTCTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQVVGAE*PVFTWG
Trigger: GCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCAC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCCTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPLHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCATCCAGAGGGCCTTGGTaGCTGCCCACCTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPSRGPW*LPTCPH
Trigger: GTGTGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGA...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CACCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCGCGCTGCCCTGGTCCTaGCCCTCAGCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HPLCARDMATQLNTFLASALPWS*PSAKLC
Trigger: GCACAGCTTTGCTGAGGGCCAGGACCAGGGCAGCGC...GGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCTGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPCPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR CCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTCAGCACATGCTTCCGTaGGGAGGATGGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPQHMLP*GGWAGE
Trigger: CTCCCCTGCCCATCCTCCCCACGGAAGCATGTGCTG...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTAGGTCCAGAGGGCCTTaGTGCCTGCCCACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSRSRGP*CLPTCP
Trigger: TGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCT...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCCCTGTGGGGCTTCTCTaGGGTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPPVGLL*GVMVTE
Trigger: CTCTGTCACCATCACACCCCAGAGAAGCCCCACAGG...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGGCCGGAGAATCCGCCTaGGGCCCGGAAAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRAGESA*GPERRL
Trigger: GAGCCGCCTTTCCGGGCCTCAGGCGGATTCTCCGGC...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000537340.6
CDS-3UTR TCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCGGTATCTGTCAGCTGTaGGGCAGAACCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPGICQL*GRTTVL
Trigger: GAGCACTGTGGTTCTGCCTCACAGCTGACAGATACC...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560928.5
CDS-3UTR GCA 90 bp ATTTGGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTCTGCCATCTCACCCATGCCAGGGCTaGCCCGCCGACGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: IWVPSEQLGPWLLSPLPSHPCQG*PADAAS
Trigger: AGATGCTGCGTCGGCGGGGCAGCCCTGGCATGGGTG...AGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCCAGTGCTCCCAGGGCTaGACCCACATGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPQCSQG*THMHTH
Trigger: ATGGGTGTGCATGTGGGTGCAGCCCTGGGAGCACTG...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCAACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKEGLGA*PPAHTW
Trigger: CCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKEAADS*APRGGR
Trigger: CCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWEAADS*APRGGR
Trigger: CCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR CCA 90 bp CTCTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LCRIWVPSEQLGPWLLSPEAADS*APRGGR
Trigger: CCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTC...AGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPAQLCM*WAQSAL
Trigger: CAGGGCACTCTGCGCCCACCACATGCACAGCTGTGC...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTCAGCACATGCTTCCGTaGGGAGGATGGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSQHMLP*GGWAGE
Trigger: CTCCCCTGCCCATCCTCCCCACGGAAGCATGTGCTG...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGGGTCTTCAGGGACCTaGACCTCCAGGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRGSSGT*TSRAPR
Trigger: GCGCGGAGCCCTGGAGGTCCAGGTCCCTGAAGACCC...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537340.6
CDS-3UTR TCA 90 bp TACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCAGACCTCCAGGGCTCCTGTaGGGCAGAACCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: YSALCHLTRGKLRLLFCRPPGLL*GRTTVL
Trigger: GAGCACTGTGGTTCTGCCTCACAGGAGCCCTGGAGG...TCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACACCCATGCCAGGGCTaGCCCGCCGACGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPHPCQG*PADAAS
Trigger: AGATGCTGCGTCGGCGGGGCAGCCCTGGCATGGGTG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACAGTGCTCCCAGGGCTaGACCCACATGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPQCSQG*THMHTH
Trigger: ATGGGTGTGCATGTGGGTGCAGCCCTGGGAGCACTG...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPALHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTCTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPLHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTTCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAATCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAAGTGTGACCAGCACATaGTTCCGTGGGGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPASVTST*FRGEDG
Trigger: CCCATCCTCCCCACGGAAGCATGTGCTGGTCACACT...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCCAGGCAGGAGCCCCCTaGAAACCGCAGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVQAGAP*KPQGAV
Trigger: CACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTG...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGAGGGCCTTGGTGCCTaGCCACCTGCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: TASRLQEMLRPHCPCLRREGLGA*PPAHTW
Trigger: CCAGGTGTGGGCAGGTGGGCAGGCACCAAGGCCCTC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAACTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQTVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGT...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559073.1
CDS-3UTR GCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCTTGAGGCTGCTCTTCTaGAGAGGGGGCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPLRLLF*RGGLRS
Trigger: TGACCTGAGGCCCCCTCTGCAGAAGAGCAGCCTCAA...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCAAAAAGGCAGCCAGATaGTCCACGCAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPKKAAR*STQHWK
Trigger: CTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTCAGCTGTGCATGTGGTaGGCGCAGAGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSQLCMW*AQSALS
Trigger: AGACAGGGCACTCTGCGCCCACCACATGCACAGCTG...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCACCACCTGCCCACACCTaGACAGACATTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPPPAHT*TDILDT
Trigger: GGTGTCCAAAATGTCTGTCCAGGTGTGGGCAGGTGG...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAAGGTCCAGAGGGCCTTaGTGCCTGCCCACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRRSRGP*CLPTCP
Trigger: TGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCT...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTGTGGGGCTTCTCTaGGGTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAPVGLL*GVMVTE
Trigger: CTCTGTCACCATCACACCCCAGAGAAGCCCCACAGG...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318443.10
CDS-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGGGTCCTCAGGGACCTaGACCTCCACGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAGSSGT*TSTAPV
Trigger: CACAGGAGCCGTGGAGGTCCAGGTCCCTGAGGACCC...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGCCGGAGAATCCGCCTaGGGCCCGGAAAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQAGESA*GPERRL
Trigger: GAGCCGCCTTTCCGGGCCTCAGGCGGATTCTCCGGC...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000537340.6
CDS-3UTR TCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCCCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCACCCATGCCAGGGCTaGCCCGCCGACGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFHPCQG*PADAAS
Trigger: AGATGCTGCGTCGGCGGGGCAGCCCTGGCATGGGTG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR GCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGCAGTGCTCCCAGGGCTaGACCCACATGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRQCSQG*THMHTH
Trigger: ATGGGTGTGCATGTGGGTGCAGCCCTGGGAGCACTG...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAAGTGTGACCAGCACATaGTTCCGTGGGGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPSVTST*FRGEDG
Trigger: CCCATCCTCCCCACGGAAGCATGTGCTGGTCACACT...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGCAGGCAGGAGCCCCCTaGAAACCGCAGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRQAGAP*KPQGAV
Trigger: CACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTG...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp AGCTGGGACCTTGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGGGTTACTCAGCCCTCTaGCATCTCACCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWDLGYSALCHLTRGKLRGYSAL*HLTRGK
Trigger: CTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACC...CCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGCTGGGCTCCCCGTGGTaGAAGGCTGCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRLGSPW*KAAPAA
Trigger: CGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAG...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR CCA 90 bp TGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: WLLSPLPSHQGEVEAALLHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...CAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAATGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTTGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCACCCAACCCCATGCTCTaGGTAAGAATTATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPPNPML*VRIMGG
Trigger: CCCACCCATAATTCTTACCCAGAGCATGGGGTTGGG...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCACCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR TCA 90 bp TGCAGCCAGAGGGTAGGAGCTGTAGGGAGGGGTAGCAGCTCCCTGGTCCTCATGAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: CSQRVGAVGRGSSSLVLMRQQAG*LRELRL
Trigger: CAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCT...CATGAGGACCAGGGAGCTGCTACCCCTCCCTACAGCTCCTACCCTCTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AFSAAMKGPEGLGACPPAETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTCCTTTTCTGCTGCTATaGAAGGTCCAGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPPFLLL*KVQRAL
Trigger: CAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGG...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATCACCCATGCCAGGGCTaGCCCGCCGACGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDHPCQG*PADAAS
Trigger: AGATGCTGCGTCGGCGGGGCAGCCCTGGCATGGGTG...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR GCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCACCCTCAGCAAAGCTGTaGACCAGCTGTTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPPSAKL*TSCLVS
Trigger: AGATACCAAACAGCTGGTGCACAGCTTTGCTGAGGG...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR GCA 90 bp TGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCACCTGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: WGVLEGGTLSSHAGPPAPGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...AGGTGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGCCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTCAGGCAGGAGCCCCCTaGAAACCGCAGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPQAGAP*KPQGAV
Trigger: CACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTG...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCAGGCTCTGCCTTTTCTaGTGCTATGAAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPRLCLF*CYERSR
Trigger: TCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCCT...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCCTGCCCCAGGCTCTaGCTTTTCTGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPPCPRL*LFCCYE
Trigger: TTCATAGCAGCAGAAAAGGCAGAGCCTGGGGCAGGG...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCACTGGGCTCCCCGTGGTaGAAGGCTGCCCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIALGSPW*KAAPAA
Trigger: CGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAG...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGCGCTGCCCTGGTCCTaGCCCTCAGCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFALPWS*PSAKLC
Trigger: GCACAGCTTTGCTGAGGGCCAGGACCAGGGCAGCGC...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGCTCCCTGGTCCTCATaGTCAGGCTATTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQAPWSS*SGYFLS
Trigger: GGACAAGAAATAGCCTGACCATGAGGACCAGGGAGC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGCTCCCTGGTCCTCATaGTCAGGCTATTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAAPWSS*SGYFLS
Trigger: GGACAAGAAATAGCCTGACCATGAGGACCAGGGAGC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGTGTATCGCATCCTTTaGAGAAGGAGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQVYRIL*RRSPPV
Trigger: GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACAC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp TGTGGTGGGCGCAGAGTGCCCTGTCTTCACTTGGGGCAGGGAGGGAAAAGGCCAAAGAGGGTGGTGATGTaGTCAGTGTACTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CGGRRVPCLHLGQGGKRPKRVVM*SVYCVP
Trigger: AGGGACACAGTACACTGACCACATCACCACCCTCTT...TGGCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR CCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTCCACCTGCCCACACCTaGACAGACATTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSPPAHT*TDILDT
Trigger: GGTGTCCAAAATGTCTGTCCAGGTGTGGGCAGGTGG...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTAGGTCCAGAGGGCCTTaGTGCCTGCCCACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPRSRGP*CLPTCP
Trigger: TGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCT...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp TGGCTCTGGAGGGGGCGTGGGAGCACAAACAGCCTCTTAGACCTAGGAGTGAAACCTGTGGGGCTTCTCTaGGGTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: WLWRGRGSTNSLLDLGVKPVGLL*GVMVTE
Trigger: CTCTGTCACCATCACACCCCAGAGAAGCCCCACAGG...TTTCACTCCTAGGTCTAAGAGGCTGTTTGTGCTCCCACGCCCCCTCCAGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561213.5
3UTR CAA 72 bp CTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTaGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSYLGPIRAAGT*VTQPSAISPGG
Trigger: TCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCCCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPARQQAG*LRELRL
Trigger: CAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCT...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCCATATGCCTGGGTTCTaGCCAATGGAATGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPHMPGF*PMECKR
Trigger: CCGCTTACATTCCATTGGTCAGAACCCAGGCATATG...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp TACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCAGAGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: YSALCHLTRGKLRLLFCRECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...TCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGACCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGTCCAGAGGGCCTTGGTaGCTGCCCACCTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQSRGPW*LPTCPH
Trigger: GTGTGGGCAGGTGGGCAGGCACCAAGGCCCTCTGGA...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAAAGCCAGGAAAAGACTaGCCCAGCCCCAGAATAGCA +
Preference number: 4 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPKPGKD*PSPRIA
Trigger: TGCTATTCTGGGGCTGGGGCAGTCTTTTCCTGGCTT...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGCGCTGCCCTGGTCCTaGCCCTCAGCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQALPWS*PSAKLC
Trigger: GCACAGCTTTGCTGAGGGCCAGGACCAGGGCAGCGC...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAAGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 4 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGATGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRCPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFAQLCM*WAQSAL
Trigger: CAGGGCACTCTGCGCCCACCACATGCACAGCTGTGC...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATCCCATCACAGACCCCTaGAGAACCAGTGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDPITDP*RTSVTS
Trigger: GCTGGTCACACTGGTTCTCCAGGGGTCTGTGATGGG...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCACCTGTGGGGCTTCTCTaGGGTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAPVGLL*GVMVTE
Trigger: CTCTGTCACCATCACACCCCAGAGAAGCCCCACAGG...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGGGTCCTCAGGGACCTaGACCTCCACGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVGSSGT*TSTAPV
Trigger: CACAGGAGCCGTGGAGGTCCAGGTCCCTGAGGACCC...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGGGTCCTCAGGGACCTaGACCTCCACGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDGSSGT*TSTAPV
Trigger: CACAGGAGCCGTGGAGGTCCAGGTCCCTGAGGACCC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp CTCTGTCGTATTTGGGTCCCATCAGAGCAGCTGGGACCTTGGTTACTCAGCCCTGAGCAGCTGGGACCTTaGTTACTCAGCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCRIWVPSEQLGPWLLSPEQLGP*LLSPLP
Trigger: TGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTC...AGGGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGACCCAAATACGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATCCTCCAGGGCTCCTGTaGGGCAGAACCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDPPGLL*GRTTVL
Trigger: GAGCACTGTGGTTCTGCCTCACAGGAGCCCTGGAGG...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGACTCCAGGAGATGTTaGGGCCGCACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPDSRRC*GRTVPV
Trigger: GACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp AGGGGTAGCAGCTCCCTGGTCCTCATGGTCAGGCTATTTCTTGTCCATCATCTTCAGTGCTCCCAGGGCTaGACCCACATGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: RGSSSLVLMVRLFLVHHLQCSQG*THMHTH
Trigger: ATGGGTGTGCATGTGGGTGCAGCCCTGGGAGCACTG...AAGATGATGGACAAGAAATAGCCTGACCATGAGGACCAGGGAGCTGCTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560928.5
CDS-3UTR GCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCGAGTGTTTCAGAGGCTaGAGGGCTGTCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVECFRG*RAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTC...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCGTCCATCATCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPVHHLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGATGATGGAC...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTCCTGTCAGAGCAGGATaGATCTGTTGGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPPVRAG*ICWGQG
Trigger: GCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGG...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGTGGTGGGCGCAGAGTaGCCTGTCTTCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDVVGAE*PVFTWG
Trigger: GCCCCAAGTGAAGACAGGGCACTCTGCGCCCACCAC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGACTCCATGCACAGCTGTaGATGTGGTGGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRLHAQL*MWWAQS
Trigger: ACTCTGCGCCCACCACATGCACAGCTGTGCATGGAG...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 4 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRTCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR GCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAGTGTGACCAGCACATaGTTCCGTGGGGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRSVTST*FRGEDG
Trigger: CCCATCCTCCCCACGGAAGCATGTGCTGGTCACACT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAAGGCTCTGCCTTTTCTaGTGCTATGAAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPARLCLF*CYERSR
Trigger: TCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCCT...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIAEAADS*APRGGR
Trigger: CCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTC...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
CDS-3UTR CCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCGTGTATCACGGCCATTaGAGAAACAAGGCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVVYHGH*RNKAGV
Trigger: CACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCAGCTGTGCATGTGGTaGGCGCAGAGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFQLCMW*AQSALS
Trigger: AGACAGGGCACTCTGCGCCCACCACATGCACAGCTG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATCAGCACATGCTTCCGTaGGGAGGATGGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDQHMLP*GGWAGE
Trigger: CTCCCCTGCCCATCCTCCCCACGGAAGCATGTGCTG...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCACCACCTGCCCACACCTaGACAGACATTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAPPAHT*TDILDT
Trigger: GGTGTCCAAAATGTCTGTCCAGGTGTGGGCAGGTGG...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCCCTCAGCAAAGCTGTaGACCAGCTGTTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: WLLSPLPSHQGEVEAALLPSAKL*TSCLVS
Trigger: AGATACCAAACAGCTGGTGCACAGCTTTGCTGAGGG...CAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp CCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PHALGKNYGWDGGEVSRKGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...CTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCAGAGCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TGCAGCCAGAGGGTAGGAGCTGTAGGGAGGGGTAGCAGCTCCCTGGTCCTCATGGTCCATCATCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CSQRVGAVGRGSSSLVLMVHHLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGATGATGGAC...CATGAGGACCAGGGAGCTGCTACCCCTCCCTACAGCTCCTACCCTCTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR GCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRTCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAAAGCCAGGAAAAGACTaGCCCAGCCCCAGAATAGCA +
Preference number: 4 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAKPGKD*PSPRIA
Trigger: TGCTATTCTGGGGCTGGGGCAGTCTTTTCCTGGCTT...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR GCA 90 bp TGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGGAGTTAGGGCTCATATaGCTGGGTTCTGACCAATGG +
Preference number: 4 (lower is better)
Translates to: WLLSPLPSHQGEVEAALLELGLI*LGSDQW
Trigger: CCATTGGTCAGAACCCAGGCATATGAGCCCTAACTC...CAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAGCGCTGCCCTGGTCCTaGCCCTCAGCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIAALPWS*PSAKLC
Trigger: GCACAGCTTTGCTGAGGGCCAGGACCAGGGCAGCGC...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGCTCCCTGGTCCTCATaGTCAGGCTATTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWAPWSS*SGYFLS
Trigger: GGACAAGAAATAGCCTGACCATGAGGACCAGGGAGC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGTGTATCGCATCCTTTaGAGAAGGAGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWVYRIL*RRSPPV
Trigger: GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACAC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPAGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp TGCAGCCAGAGGGTAGGAGCTGTAGGGAGGGGTAGCAGCTCCCTGGTCCTCATGAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: CSQRVGAVGRGSSSLVLMRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...CATGAGGACCAGGGAGCTGCTACCCCTCCCTACAGCTCCTACCCTCTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGTGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATCAGCTGTGCATGTGGTaGGCGCAGAGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDQLCMW*AQSALS
Trigger: AGACAGGGCACTCTGCGCCCACCACATGCACAGCTG...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRAQLCM*WAQSAL
Trigger: CAGGGCACTCTGCGCCCACCACATGCACAGCTGTGC...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATAAAAAGGCAGCCAGATaGTCCACGCAGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDKKAAR*STQHCQ
Trigger: CTGACAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559073.1
CDS-3UTR CCA 90 bp CAATGGAATGTAAGCGGAAGTGATGCAGGCTACTTCCACTCAAGCTCTAGAAGGCCTTTCTCTCCCTCTTaGCTCTGGAGGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QWNVSGSDAGYFHSSSRRPFSPS*LWRGRG
Trigger: CCCACGCCCCCTCCAGAGCCAAGAGGGAGAGAAAGG...CCTTCTAGAGCTTGAGTGGAAGTAGCCTGCATCACTTCCGCTTACATTCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGCCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSEMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACCTTTTCTGCTGCTATaGAAGGTCCAGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPPFLLL*KVQRAL
Trigger: CAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp CACCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCATGCCTGGCCTAAGCTaGCACTTTTTATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: HPLCARDMATQLNTFLASMPGLS*HFLSPS
Trigger: AGATGGAGATAAAAAGTGTCAGCTTAGGCCAGGCAT...GGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR GCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIAGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGTCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCCCTGCCCCAGGCTCTaGCTTTTCTGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFPCPRL*LFCCYE
Trigger: TTCATAGCAGCAGAAAAGGCAGAGCCTGGGGCAGGG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCCCTTCGGTGAAACTGTaGACCAGCTGTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVPSVKL*TSCLVS
Trigger: AGACACCAAACAGCTGGTGCACAGTTTCACCGAAGG...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGCACCCACAGGGCCTCTaGGGGGAATGTCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRHPQGL*GECHRL
Trigger: CAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTG...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATAAGAGGGTGGTGATGTaGTCAGTGTACTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDKRVVM*SVYCVP
Trigger: AGGGACACAGTACACTGACCACATCACCACCCTCTT...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAAGAGGGTGGTGATGTaGTCAGTGTACTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVKRVVM*SVYCVP
Trigger: AGGGACACAGTACACTGACCACATCACCACCCTCTT...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp AGGGGTAGCAGCTCCCTGGTCCTCATGGTCAGGCTATTTCTTGTCCATCATCTTTGGTCCACGCAGCACTaGAAGAAGAGGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RGSSSLVLMVRLFLVHHLWSTQH*KKRVVM
Trigger: CATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCA...AAGATGATGGACAAGAAATAGCCTGACCATGAGGACCAGGGAGCTGCTACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560928.5
CDS-3UTR CCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAAAAAGGCAGCCAGATaGTCCACGCAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRKKAAR*STQHWK
Trigger: CTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGTGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVCPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGCAGCTGTGCATGTGGTaGGCGCAGAGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRQLCMW*AQSALS
Trigger: AGACAGGGCACTCTGCGCCCACCACATGCACAGCTG...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAGCACAGCTGTGCATGTaGTGGGCGCAGAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIAAQLCM*WAQSAL
Trigger: CAGGGCACTCTGCGCCCACCACATGCACAGCTGTGC...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
3UTR CAA 72 bp GCAGGGCTGAACATGATCACTAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGTGACTATGCATCGTGT +
Preference number: 4 (lower is better)
Translates to: AGLNMITSVSRP*EKQGRGDYASC
Trigger: ACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACTAGTGATCATGTTCAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRRQQAG*LRELRL
Trigger: CAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATCGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp CCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCCCAAAACAGGAAGGAAATaGCCTATCTCCTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: PTVRQGHGYPAEHFSSLPKTGRK*PISCIS
Trigger: GGAAATACAGGAGATAGGTCATTTCCTTCCTGTTTT...GGGGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGTCCAGCACGTGCACCTaGAGGTCTCCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRSSTCT*RSPCTA
Trigger: AGCTGTGCATGGAGACCTGCAGGTGCACGTGCTGGA...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGACGTGTTCCAGCACGTaGACCTGCAGGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRTCSST*TCRSPC
Trigger: GCATGGAGACCTGCAGGTGCACGTGCTGGAACACGT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR GCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTAAGCCAGGAAAAGACTaGCCCAGCCCCAGAATAGCA +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFKPGKD*PSPRIA
Trigger: TGCTATTCTGGGGCTGGGGCAGTCTTTTCCTGGCTT...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGAATAAGGCTGCACAGTaGTCTGTGTATCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRNKAAQ*SVYRIL
Trigger: AAGGATGCGATACACAGACCACTGTGCAGCCTTATT...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTAAAAAGGCAGCCAGATaGTCCACGCAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFKKAAR*STQHWK
Trigger: CTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAGGTAAGAATTATGGGTaGGATGGGGGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPGKNYG*DGGEVS
Trigger: GGATACCTCACCCCCATCCCACCCATAATTCTTACC...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCCCAACCCCATGCTCTaGGTAAGAATTATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFPNPML*VRIMGG
Trigger: CCCACCCATAATTCTTACCCAGAGCATGGGGTTGGG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAACAAGGCCGGGGTaGCTATGCATCGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVETRPG*LCIVSL
Trigger: CAAAGACACGATGCATAGTCACCCCGGCCTTGTTTC...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGCGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 4 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp AGGGGTAGCAGCTCCCTGGTCCTCATGGTCAGGCTATTTCTTGTCCATCATCTTCCCTCAGCAAAGCTGTaGACCAGCTGTTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: RGSSSLVLMVRLFLVHHLPSAKL*TSCLVS
Trigger: AGATACCAAACAGCTGGTGCACAGCTTTGCTGAGGG...AAGATGATGGACAAGAAATAGCCTGACCATGAGGACCAGGGAGCTGCTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560928.5
CDS-3UTR GCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGCCCTGCCCCAGGCTCTaGCTTTTCTGCTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRPCPRL*LFCCYE
Trigger: TTCATAGCAGCAGAAAAGGCAGAGCCTGGGGCAGGG...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGCTCCCTGGTCCTCATaGTCAGGCTATTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDAPWSS*SGYFLS
Trigger: GGACAAGAAATAGCCTGACCATGAGGACCAGGGAGC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGTATCGCATCCTTTaGAGAAGGAGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQVYRIL*RRSPPV
Trigger: GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACAC...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATAATAAGGCTGCACAGTaGTCTGTGTATCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDNKAAQ*SVYRIL
Trigger: AAGGATGCGATACACAGACCACTGTGCAGCCTTATT...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGATGCCCTGTCTTCACTTaGGGCAGGGAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGCPVFT*GREGKG
Trigger: GCCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCA...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGACCCATCACAGACCCCTaGAGAACCAGTGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGPITDP*RTSVTS
Trigger: GCTGGTCACACTGGTTCTCCAGGGGTCTGTGATGGG...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR TCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGCCTCACAGCTCTGTTTaGTCTTTCTCCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQPHSSV*SFSSTR
Trigger: TCGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGG...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGAGGCAGCAGGCAGGATaGCTTAGAGAACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVRQQAG*LRELRL
Trigger: CAACCTTAGTTCTCTAAGTCATCCTGCCTGCTGCCT...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGGAAATGTATGTACTGTaGAATAAGGCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EAALSLSEKKRFYAGGSREMYVL*NKAAGR
Trigger: CCTGCCTGCTGCCTTATTTCACAGTACATACATTTC...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp TACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCAGATCCAAATGTCATCACTaGCATTATAACAATAGGCCC +
Preference number: 4 (lower is better)
Translates to: YSALCHLTRGKLRLLFCRSKCHH*HYNNRP
Trigger: GGGCCTATTGTTATAATGTCAGTGATGACATTTGGA...TCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR GCA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCGTCCATCATCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVVHHLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGATGATGGAC...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGGGCAGGGCTCACAGTaGAGCCCCATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSGQGSQ*SPIAAR
Trigger: TCTGGCTGCAATGGGGCTGCACTGTGAGCCCTGCCC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIATCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR GCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGCCTTCGGTGAAACTGTaGACCAGCTGTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVPSVKL*TSCLVS
Trigger: AGACACCAAACAGCTGGTGCACAGTTTCACCGAAGG...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp AGGCCCAATAATGACTATGGACATTTACTAACCACCCACTGTGCGCCAGGGACACCTTCGGTGAAACTGTaGACCAGCTGTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RPNNDYGHLLTTHCAPGTPSVKL*TSCLVS
Trigger: AGACACCAAACAGCTGGTGCACAGTTTCACCGAAGG...TGTCCCTGGCGCACAGTGGGTGGTTAGTAAATGTCCATAGTCATTATTGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: AQWSVYRILWRRSPPVRARELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGGTAAGAATTATGGGTaGGATGGGGGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDGKNYG*DGGEVS
Trigger: GGATACCTCACCCCCATCCCACCCATAATTCTTACC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CAATGGAATGTAAGCGGAAGTGATGCAGGCTACTTCCACTCAAGCTCTAGAAGGCAGGTAAGTGGAACCTaGCTCCAGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QWNVSGSDAGYFHSSSRRQVSGT*LQVISG
Trigger: ACCACTGATGACCTGGAGCCAGGTTCCACTTACCTG...CCTTCTAGAGCTTGAGTGGAAGTAGCCTGCATCACTTCCGCTTACATTCCATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGGAAGAAGAGGGTGGTaGTGTGGTCAGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGGRRGW*CGQCTV
Trigger: CACAGTACACTGACCACATCACCACCCTCTTCTTCC...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR TCA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGCGCACTGTCCCTGTCTaGGAAGAAAAGATTCTATGC +
Preference number: 4 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVRTVPV*EEKILC
Trigger: GCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCG...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR GCA 90 bp GTCATCAGTGGTTTTACGATTACCTATGCTCACACTATCACAGGAAGGAGGAATACTAACCACCCACTGTaGGCCAGGGACATGGCTACC +
Preference number: 4 (lower is better)
Translates to: VISGFTITYAHTITGRRNTNHPL*ARDMAT
Trigger: GGTAGCCATGTCCCTGGCGCACAGTGGGTGGTTAGT...ATTCCTCCTTCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGCTCCCTGGTCCTCATaGTCAGGCTATTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGAPWSS*SGYFLS
Trigger: GGACAAGAAATAGCCTGACCATGAGGACCAGGGAGC...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGCAGGATGCATCTGTTaGGGGCAGGGCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSAGCIC*GQGSQC
Trigger: GCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGGGAATCATGTCCATTaGAGAAATAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPGNHVH*RNKAAQ
Trigger: CTGTGCAGCCTTATTTCTCCAATGGACATGATTCCC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGACCCAACCCCATGCTCTaGGTAAGAATTATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGPNPML*VRIMGG
Trigger: CCCACCCATAATTCTTACCCAGAGCATGGGGTTGGG...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp CACCCACTGTGCGCCAGGGACATGGCTACCCAGCTGAACACTTTTCTAGCCTCCTGCCCAGCTCTTCTATaGTTATTTGATTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HPLCARDMATQLNTFLASCPALL*LFDSEK
Trigger: TTTTTCAGAATCAAATAACCATAGAAGAGCTGGGCA...GGAGGCTAGAAAAGTGTTCAGCTGGGTAGCCATGTCCCTGGCGCACAGTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp TGGCTCCAGGTCATCAGTGGTTTTACGATTACCTATGCTCACACTATCACAGGATCACTAGTGAAAGGATaGTGCCTACCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WLQVISGFTITYAHTITGSLVKG*CLPTLS
Trigger: TGAGAGGGTGGGTAGGCATCATCCTTTCACTAGTGA...TCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGACCTGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCCATCATCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPVHHLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGATGATGGAC...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCACAGTGCAGCCCCATTaGAGCCAGAGGGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSTVQPH*SQRVGA
Trigger: AGCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGT...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCACCTTCGGTGAAACTGTaGACCAGCTGTTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIAPSVKL*TSCLVS
Trigger: AGACACCAAACAGCTGGTGCACAGTTTCACCGAAGG...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGGCAGCAGGATGACTTaGGAATCATGTCCATTGGAG +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGGSRMT*ESCPLE
Trigger: CTCCAATGGACATGATTCCCAAGTCATCCTGCTGCC...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGGTAAGAATTATGGGTaGGATGGGGGTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGGKNYG*DGGEVS
Trigger: GGATACCTCACCCCCATCCCACCCATAATTCTTACC...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318424.9
ENST00000318443.10
CDS-3UTR CCA 90 bp GACCTATCTCCTGTATTTCCAAATGTCATCACTGACATTATAACAATAGGCCCAGCTCTGGAGGGGGCGTaGGAGCACAAACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DLSPVFPNVITDIITIGPALEGA*EHKQPL
Trigger: AAGAGGCTGTTTGTGCTCCCACGCCCCCTCCAGAGC...TGGGCCTATTGTTATAATGTCAGTGATGACATTTGGAAATACAGGAGATAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR TCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR GCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCACCTGCAGGTCTCCATaGACAGCTGTGCATGTGGTG +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSTCRSP*TAVHVV
Trigger: CACCACATGCACAGCTGTGCATGGAGACCTGCAGGT...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAATAAGGCTGCACAGTaGTCTGTGTATCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRNKAAQ*SVYRIL
Trigger: AAGGATGCGATACACAGACCACTGTGCAGCCTTATT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAAAAAAGGCAGCAGGATaGCTTGGGAATCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGKKAAG*LGNHVH
Trigger: ATGGACATGATTCCCAAGTCATCCTGCTGCCTTTTT...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGCATCGTGTCTTTGGTaGAATAAGGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSASCLW*NKAGGQ
Trigger: CTGACCCCCTGCCTTATTTCACCAAAGACACGATGC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR TCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCCCTTTTCTGCTGCTATaGAAGGTCCAGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSPFLLL*KVQRAL
Trigger: CAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGG...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRRELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CCA 90 bp GACCTATCTCCTGTATTTCCAAATGTCATCACTGACATTATAACAATAGGCCCATCCCATCAGAGCAGCTaGGACCTTGGTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: DLSPVFPNVITDIITIGPSHQSS*DLGYSA
Trigger: GGCTGAGTAACCAAGGTCCCAGCTGCTCTGATGGGA...TGGGCCTATTGTTATAATGTCAGTGATGACATTTGGAAATACAGGAGATAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp GACCTATCTCCTGTATTTCCAAATGTCATCACTGACATTATAACAATAGGCCCAGGGAATGTCATAGGCTaGCCTGTGATGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: DLSPVFPNVITDIITIGPGNVIG*PVMVTE
Trigger: CTCTGTCACCATCACAGGGCAGCCTATGACATTCCC...TGGGCCTATTGTTATAATGTCAGTGATGACATTTGGAAATACAGGAGATAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp CAATGGAATGTAAGCGGAAGTGATGCAGGCTACTTCCACTCAAGCTCTAGAAGGTGTCTTTACCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QWNVSGSDAGYFHSSSRRCLYLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGGTAAAGACA...CCTTCTAGAGCTTGAGTGGAAGTAGCCTGCATCACTTCCGCTTACATTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CCA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCAAGAGAACTAAGGTTGTaGGTGGTCTGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIARELRL*VVCSLC
Trigger: ACACAATGAACAGACCACCCACAACCTTAGTTCTCT...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR TCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGGGGGTCAGTCAGTCTaGATATTGCATCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSGGQSV*ILHLLE
Trigger: CTCCAAAAGATGCAATATTCAGACTGACTGACCCCC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CCA 90 bp GTCATCAGTGGTTTTACGATTACCTATGCTCACACTATCACAGGAAGGAGGAATGCTCCAGGTCATCAGTaGTTTTACGATTACCTATGC +
Preference number: 4 (lower is better)
Translates to: VISGFTITYAHTITGRRNAPGHQ*FYDYLC
Trigger: GCATAGGTAATCGTAAAACCACTGATGACCTGGAGC...ATTCCTCCTTCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR GCA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGTCCATCATCTTCTTTaGTGTCAGAGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSVHHLL*CQSVSE
Trigger: CTCTGAAACACTCTGACAGCAAAGAAGATGATGGAC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR GCA 90 bp GACCTATCTCCTGTATTTCCAAATGTCATCACTGACATTATAACAATAGGCCCAAATAAACTCCTGTCCTaGTTAAGCCTCTGTCGTATT +
Preference number: 4 (lower is better)
Translates to: DLSPVFPNVITDIITIGPNKLLS*LSLCRI
Trigger: AATACGACAGAGGCTTAAGCAGGACAGGAGTTTATT...TGGGCCTATTGTTATAATGTCAGTGATGACATTTGGAAATACAGGAGATAGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS CCA 90 bp TGTACTCCAGTCTGGGCGATACTGCAAGACGCGCCGCGCCGACTCTaGGACTCAGGGACGCGGCCCAGCCTGGCTCAGTCGCCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: CTPVWAILQDAPRRL*DSGTRPSLAQSPPQ
Trigger: CTGCGGCGGCGACTGAGCCAGGCTGGGCCGCGTCCCTGAGTCCCAGAGTCGGCGCGGCGCGTCTTGCAGTATCGCCCAGACTGGAGTACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558689.5
CDS GCA 90 bp GACCTCCAGGGCTCCTGTGAGGCAGAACCACAGTGCTCCCAGGGCTaGACCCACATGCACACCCATGCCAGGGCTGCCCCGCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: DLQGSCEAEPQCSQG*THMHTHARAAPPTQ
Trigger: CTGCGTCGGCGGGGCAGCCCTGGCATGGGTGTGCATGTGGGTGCAGCCCTGGGAGCACTGTGGTTCTGCCTCACAGGAGCCCTGGAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000558689.5
ENST00000560786.6
ENST00000560995.5
ENST00000561213.5
ENST00000561260.5
ENST00000561416.5
ENST00000563584.5
ENST00000564751.5
ENST00000567189.5
CDS GCA 90 bp GTGAGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTaGTGGTCATCGACTGGCGGCAGAACAGGGCTGGAATCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VRRLTAGLPVVEGCP*WSSTGGRTGLESCC
Trigger: ACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 90 bp CTTCCTGTGAGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTaGCCCTGCTGGTCATCGACTGGCGGCAGAACAGGGCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: LPVRRLTAGLPVVEG*PCWSSTGGRTGLES
Trigger: GGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS CCA 90 bp AGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTGCTaGTCATCGACTGGCGGCAGAACAGGGCTGGAATCCTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RRLTAGLPVVEGCPC*SSTGGRTGLESCCP
Trigger: TGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 90 bp GTAGTGAGTGGAAATCGCGCCACTGTACTCCAGTCTGGGCGATACTaGAAGACGCGCCGCGCCGACTCTGGGACTCAGGGACGCGGCCCA +
Preference number: 5 (lower is better)
Translates to: VVSGNRATVLQSGRY*KTRRADSGTQGRGP
Trigger: TGGGCCGCGTCCCTGAGTCCCAGAGTCGGCGCGGCGCGTCTTGCAGTATCGCCCAGACTGGAGTACAGTGGCGCGATTTCCACTCACTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558689.5
CDS-3UTR CAA 90 bp GCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCACCTGCCCACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: AFSAAMKGPEGLGACPPAHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...GGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp GATTCTCTAGCCGTGGCGAGGGGCTATGTCCCTCTCTCCAGGTTTCCGCCCCAACACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: DSLAVARGYVPLSRFPPQHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...TTGGGGCGGAAACCTGGAGAGAGGGACATAGCCCCTCGCCACGGCTAGAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS GCA 90 bp TGCCCCTGCTGGTCATCGACTGGCGGCAGAACAGGGCTGGAATCCTaGTGTCCAACCCCAGTCTTGGGTTCTTCCTCCACACCATGCTGG +
Preference number: 5 (lower is better)
Translates to: CPCWSSTGGRTGLES*CPTPVLGSSSTPCW
Trigger: CCAGCATGGTGTGGAGGAAGAACCCAAGACTGGGGTTGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS CCA 90 bp TGGAAGGCTGCCCCTGCTGGTCATCGACTGGCGGCAGAACAGGGCTaGAATCCTGCTGTCCAACCCCAGTCTTGGGTTCTTCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: WKAAPAGHRLAAEQG*NPAVQPQSWVLPPH
Trigger: GTGTGGAGGAAGAACCCAAGACTGGGGTTGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS-3UTR CAA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp CTCTCCAGGTTTCCGCCCCAACCCCATGCTCTGGGTAAGAATTATGGGTGGGATAAGGTCCAGAGGGCCTaGGTGCCTGCCCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSRFPPQPHALGKNYGWDKVQRA*VPAHLP
Trigger: GGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTT...ATCCCACCCATAATTCTTACCCAGAGCATGGGGTTGGGGCGGAAACCTGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp AGCTGGGACCTTGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGTCCTTTCTCTCCCTCTaGGCTCTGGAGGGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: SWDLGYSALCHLTRGKLRSFLSL*ALEGAW
Trigger: CCACGCCCCCTCCAGAGCCAAGAGGGAGAGAAAGGA...CCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp CCAGGCAGGAGCCCCCTGCAAACCGCAGGGTGCAGTGTAGTTAGTTGTCTGTCTGTGCCCTGTCTTCACTaGGGGCAGGGAGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: PGRSPLQTAGCSVVSCLSVPCLH*GQGGKR
Trigger: CCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCAC...AGACAGACAACTAACTACACTGCACCCTGCGGTTTGCAGGGGGCTCCTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp TGGGTAAGAATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCAAAGGTCCAGAGGGCCTaGGTGCCTGCCCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: WVRIMGGMGVRYPGSLEPKVQRA*VPAHLP
Trigger: GGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTT...TGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAATTCTTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGAAGGTCCAGAGGGCCTaGGTGCCTGCCCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRKVQRA*VPAHLP
Trigger: GGGCAGGTGGGCAGGCACCAAGGCCCTCTGGACCTT...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS GCA 90 bp CTTCCTGTGAGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTaGCCCTGCCTCACAGTGTTGCTGCAAATACAGTTTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPVRRLTAGLPVVEG*PCLTVLLQIQFLLP
Trigger: AGGAAGAAGAAACTGTATTTGCAGCAACACTGTGAGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563584.5
CDS-3UTR CAA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCACACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCAAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPASVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp AGCAGCTGGGACCTTGGTTACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGCTCACCAGGGGGAAGTaGAGGCTGCTCTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SSWDLGYSALCHLTRGKLLTRGK*RLLFCR
Trigger: TCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAG...CAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp TACTCAGCCCTCTGCCATCTCACCAGGGGGAAGTTGAGGCTGCTCTTCTGCAGAAGAGCAGCTGGGACCTaGGTTACTCAGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: YSALCHLTRGKLRLLFCRRAAGT*VTQPSA
Trigger: GGCAGAGGGCTGAGTAACCAAGGTCCCAGCTGCTCT...TCTGCAGAAGAGCAGCCTCAACTTCCCCCTGGTGAGATGGCAGAGGGCTGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GGCTCTGCCTTTTCTGCTGCTATGAAAGGTCCAGAGGGCCTTGGTGCCTGCCCAAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: GSAFSAAMKGPEGLGACPSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...TGGGCAGGCACCAAGGCCCTCTGGACCTTTCATAGCAGCAGAAAAGGCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp GCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGAGCAGTGCCCTGTCTTCACTaGGGGCAGGGAGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: AQWSVYRILWRRSPPVRAVPCLH*GQGGKR
Trigger: CCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCAC...TGCTCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
CDS-3UTR CAA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCATCCTCACAGCTCTGTTaGATCTTTCTCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPASSQLC*IFLQHT
Trigger: CGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGGA...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVRLQEM*RPHCPC
Trigger: ACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCT...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp CCCACCTGTCAGAGCAGGATGCATCTGTTGGGGGCAGGGCTCACAGTGCAGCCCTGTCCATCATCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PTCQSRMHLLGAGLTVQPCPSSS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGATGATGGACA...GGGCTGCACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCTCTGACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGCACAGTGCAGCCCCATaGCAGCCAGAGGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRHSAAP*QPEGRS
Trigger: GCTCCTACCCTCTGGCTGCAATGGGGCTGCACTGTG...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGTGTGTATCGCATCCTTaGGAGAAGGAGCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWCVSHP*EKEPTC
Trigger: ACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACA...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCAGATGTGTATCGCATCCTTaGGAGAAGGAGCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: AAQWSVYRILWRRSPPVRCVSHP*EKEPTC
Trigger: ACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACA...TCTGACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCTGTGTATCGCATCCTTaGGAGAAGGAGCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVCVSHP*EKEPTC
Trigger: ACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACA...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp ACAGCTTCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAGTGTATCACGGCCATaGGAGAAACAAGGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: TASRLQEMLRPHCPCLRRSVSRP*EKQGRG
Trigger: ACCCCGGCCTTGTTTCTCCAATGGCCGTGATACACT...TCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp AATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: NKAAQWSVYRILWRRSPPRLQEM*RPHCPC
Trigger: ACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCT...AGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATGTGCCCTGTCTTCACTaGGGGCAGGGAGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDVPCLH*GQGGKR
Trigger: CCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCAC...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
CDS-3UTR CAA 90 bp ATTATGGGTGGGATGGGGGTGAGGTATCCAGGAAGCCTTGAGCCACAGAGGAGGCTGGATGGGGAGTCCTaGAGGGAGGAACTTTATCTT +
Preference number: 5 (lower is better)
Translates to: IMGGMGVRYPGSLEPQRRLDGES*REELYL
Trigger: AAGATAAAGTTCCTCCCTCAAGGACTCCCCATCCAG...CCTCCTCTGTGGCTCAAGGCTTCCTGGATACCTCACCCCCATCCCACCCATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp AAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAGAAGGAGCCCACCTGTCTCCTCACAGCTCTGTTaGATCTTTCTCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: KAAQWSVYRILWRRSPPVSSQLC*IFLQHT
Trigger: CGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGGA...GACAGGTGGGCTCCTTCTCCAAAGGATGCGATACACAGACCACTGTGCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GGATGGGGAGTCCTTGAGGGAGGAACTTTATCTTCCCACGCAGGGCCCCCAGCATGTCCATCATCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: GWGVLEGGTLSSHAGPPACPSSS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGATGATGGACA...TGCTGGGGGCCCTGCGTGGGAAGATAAAGTTCCTCCCTCAAGGACTCCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQRLQEM*RPHCPC
Trigger: ACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCT...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGAAGCAGGATGCATCTGTaGGGGGCAGGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGSRMHL*GAGLTV
Trigger: CACTGTGAGCCCTGCCCCCAACAGATGCATCCTGCT...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAGACTCCAGGAGATGTaGAGGCCGCACTGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRRLQEM*RPHCPC
Trigger: ACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS GCA 90 bp TGCATACACAGACACAACCTCAAGCCCAGGTGTCTTTACCTTCTTTaGTGTCAGAGTGTTTCAGAGGCTGCAGGGCTGTCTTGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: CIHRHNLKPRCLYLL*CQSVSEAAGLSWSL
Trigger: AAGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTCTGACAGCAAAGAAGGTAAAGACACCTGGGCTTGAGGTTGTGTCTGTGTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GTGTATCACGGCCATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTCTGGATGGGGAGTCCTaGAGGGAGGAACTTTATCTT +
Preference number: 5 (lower is better)
Translates to: VYHGHWRNKAGVTMHRVFLDGES*REELYL
Trigger: AAGATAAAGTTCCTCCCTCAAGGACTCCCCATCCAG...AAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATGGCCGTGATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS-3UTR CAA 90 bp AAAAAGGCAGCCAGATGGTCCACGCAGCACTGGAAGAAGAGGGTGGTGATGTGGTGTCCATCATCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: KKAARWSTQHWKKRVVMWCPSSS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGATGATGGACA...CCACATCACCACCCTCTTCTTCCAGTGCTGCGTGGACCATCTGGCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp CAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: QEMLRPHCPCLRRKDSMQRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...CTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGGAAGCAGGCTTAGAGAACTAAGGTaGTGGGTGGTCTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: EAALSLSEKKRFYAGGSRLRELR*WVVCSL
Trigger: CAATGAACAGACCACCCACAACCTTAGTTCTCTAAG...CCTGCTTCCACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGTCCTCACAGCTCTGTTaGATCTTTCTCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRSSQLC*IFLQHT
Trigger: CGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGGA...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp CATTGGAGAAACAAGGCCGGGGTGACTATGCATCGTGTCTTTGGTGAAATAAGGAGGCAGCAGGATGACTaGGGAATCATGTCCATTGGA +
Preference number: 5 (lower is better)
Translates to: HWRNKAGVTMHRVFGEIRRQQDD*GIMSIG
Trigger: TCCAATGGACATGATTCCCAAGTCATCCTGCTGCCT...CCTTATTTCACCAAAGACACGATGCATAGTCACCCCGGCCTTGTTTCTCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp GTTTACAAAATCCCTCCGAGTCCCACATTTAAATTAGAAGTCCTCACATCTTCCGTGCCCTGTCTTCACTaGGGGCAGGGAGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VYKIPPSPTFKLEVLTSSVPCLH*GQGGKR
Trigger: CCTTTTCCCTCCCTGCCCCAAGTGAAGACAGGGCAC...GGAAGATGTGAGGACTTCTAATTTAAATGTGGGACTCGGAGGGATTTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000559073.1
CDS GCA 90 bp CAAGACGTAGACTCAAGGTCACACACAGACAAATCCAGCCCCATCTaGACACACACACTCGTTCTGTCACTAGAAAGTGACACTCTATTG +
Preference number: 5 (lower is better)
Translates to: QDVDSRSHTDKSSPI*THTLVLSLESDTLL
Trigger: CAATAGAGTGTCACTTTCTAGTGACAGAACGAGTGTGTGTGTGCAGATGGGGCTGGATTTGTCTGTGTGTGACCTTGAGTCTACGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557951.1
CDS-3UTR CAA 90 bp ATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCATCCTTTGGATCCTCACAGCTCTGTTaGATCTTTCTCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: MSIGEIRLHSGLCIASFGSSQLC*IFLQHT
Trigger: CGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGGA...TCCAAAGGATGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS-3UTR CAA 90 bp TGGCTCCAGGTCATCAGTGGTTTTACGATTACCTATGCTCACACTATCACAGGATCCTCACAGCTCTGTTaGATCTTTCTCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: WLQVISGFTITYAHTITGSSQLC*IFLQHT
Trigger: CGTGTGCTGGAGAAAGATCAAACAGAGCTGTGAGGA...TCCTGTGATAGTGTGAGCATAGGTAATCGTAAAACCACTGATGACCTGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp TCTAGACTCCAGGAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTGTCCATCATCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: SRLQEMLRPHCPCLRRKDCPSSS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGATGATGGACA...ATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTCCTGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp GAGATGTTGAGGCCGCACTGTCCCTGTCTGAGAAGAAAAGATTCTATGCAGGTGTGTCCATCATCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: EMLRPHCPCLRRKDSMQVCPSSS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGATGATGGACA...CACCTGCATAGAATCTTTTCTTCTCAGACAGGGACAGTGCGGCCTCAACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000559073.1
ENST00000560928.5
CDS-3UTR CAA 90 bp AGGCCCAATAATGACTATGGACATTTACTAACCACCCACTGTGCGCCAGGGACAGTGTCTTTACCTTCTTaGCTGTCAGAGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: RPNNDYGHLLTTHCAPGTVSLPS*LSECFR
Trigger: TCTGAAACACTCTGACAGCAAAGAAGGTAAAGACAC...TGTCCCTGGCGCACAGTGGGTGGTTAGTAAATGTCCATAGTCATTATTGGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS-3UTR CAA 90 bp TTGGGAATCATGTCCATTGGAGAAATAAGGCTGCACAGTGGTCTGTGTATCGCACTTAGAGAACTAAGGTaGTGGGTGGTCTGTTCATTG +
Preference number: 5 (lower is better)
Translates to: LGIMSIGEIRLHSGLCIALRELR*WVVCSL
Trigger: CAATGAACAGACCACCCACAACCTTAGTTCTCTAAG...TGCGATACACAGACCACTGTGCAGCCTTATTTCTCCAATGGACATGATTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000537340.6
ENST00000560928.5
CDS GCA 72 bp CTGACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTaGCGCGCCGCGCCGACTCTGGGACTCAGGGACGCG +
Preference number: 6 (lower is better)
Translates to: LTAGLPVVEGCP*RAAPTLGLRDA
Trigger: CGCGTCCCTGAGTCCCAGAGTCGGCGCGGCGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000561213.5
CDS CCA 72 bp GACCTGGACCTCCAGGGCTCCGCGCCGCGCCGACTCTaGGACTCAGGGACGCGGCCCAGCCTGGCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: DLDLQGSAPRRL*DSGTRPSLAQS
Trigger: CGACTGAGCCAGGCTGGGCCGCGTCCCTGAGTCCCAGAGTCGGCGCGGCGCGGAGCCCTGGAGGTCCAGGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537340.6
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCCGCGC +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLPR
Trigger: GCGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318424.9
ENST00000318443.10
ENST00000560928.5
ENST00000561213.5
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLPP
Trigger: CGGCGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560786.6
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLPG
Trigger: GCCGGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561416.5
ENST00000567582.5
CDS CCA 72 bp GTCTGGGCGATACTGCAAGACGCGCCGCGCCGACTCTaGGACTCAGGGACGCGGCCCAGCCTGGCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: VWAILQDAPRRL*DSGTRPSLAQS
Trigger: CGACTGAGCCAGGCTGGGCCGCGTCCCTGAGTCCCAGAGTCGGCGCGGCGCGTCTTGCAGTATCGCCCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558689.5
CDS GCA 72 bp AGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTaGCCCTGCTGGTCATCGACTGGCGGCAGAACAGGG +
Preference number: 6 (lower is better)
Translates to: RRLTAGLPVVEG*PCWSSTGGRTG
Trigger: CCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLPV
Trigger: GACAGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561260.5
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLPH
Trigger: GTGAGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563584.5
CDS CCA 72 bp GCCGACGCAGCATCTTCCTGTGAGGCGGCTGACAGCTaGGCTCCCCGTGGTGGAAGGCTGCCCCTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: ADAASSCEAADS*APRGGRLPLLV
Trigger: GACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCTCACAGGAAGATGCTGCGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 72 bp CCCTGCCTGTCCTTCCCGGAATCTGACCCCTCATGCTaGCCACGGCTGCCTGTGGAAGTGCACCAGTCGCCC +
Preference number: 6 (lower is better)
Translates to: PCLSFPESDPSC*PRLPVEVHQSP
Trigger: GGGCGACTGGTGCACTTCCACAGGCAGCCGTGGGCAGCATGAGGGGTCAGATTCCGGGAAGGACAGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561260.5
CDS GCA 72 bp CTGACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTaGTGGTCATCGACTGGCGGCAGAACAGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LTAGLPVVEGCP*WSSTGGRTGLE
Trigger: TTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS CCA 72 bp ACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTGCTaGTCATCGACTGGCGGCAGAACAGGGCTGGAATCC +
Preference number: 6 (lower is better)
Translates to: TAGLPVVEGCPC*SSTGGRTGLES
Trigger: GGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS TCA 72 bp GGTGGAAGGCTGCCCCTGCCTGTCCTTCCCGGAATCTaGCCCCTCATGCTGCCCACGGCTGCCTGTGGAAGT +
Preference number: 6 (lower is better)
Translates to: GGRLPLPVLPGI*PLMLPTAACGS
Trigger: ACTTCCACAGGCAGCCGTGGGCAGCATGAGGGGTCAGATTCCGGGAAGGACAGGCAGGGGCAGCCTTCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561260.5
CDS GCA 72 bp CCTTCCCGGAATCTGACCCCTCATGCTGCCCACGGCTaGCTGTGGAAGTGCACCAGTCGCCCACACCTTCGC +
Preference number: 6 (lower is better)
Translates to: PSRNLTPHAAHG*LWKCTSRPHLR
Trigger: GCGAAGGTGTGGGCGACTGGTGCACTTCCACAGGCAGCCGTGGGCAGCATGAGGGGTCAGATTCCGGGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561260.5
CDS CCA 72 bp CCCCGTGGTGGAAGGCTGCCCCTGCTGGTCATCGACTaGCGGCAGAACAGGGCTGGAATCCTGCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: PRGGRLPLLVID*RQNRAGILLSN
Trigger: GTTGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGCAGCCTTCCACCACGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 72 bp AGGCGGCTGACAGCTGGGCTCCCCGTGGTGGAAGGCTaGCCCTGCCTCACAGTGTTGCTGCAAATACAGTTT +
Preference number: 6 (lower is better)
Translates to: RRLTAGLPVVEG*PCLTVLLQIQF
Trigger: AAACTGTATTTGCAGCAACACTGTGAGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563584.5
CDS CCA 72 bp GCCCCTGCTGGTCATCGACTGGCGGCAGAACAGGGCTaGAATCCTGCTGTCCAACCCCAGTCTTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: APAGHRLAAEQG*NPAVQPQSWVL
Trigger: AAGAACCCAAGACTGGGGTTGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 72 bp TGGTCATCGACTGGCGGCAGAACAGGGCTGGAATCCTaGTGTCCAACCCCAGTCTTGGGTTCTTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: WSSTGGRTGLES*CPTPVLGSSST
Trigger: TGTGGAGGAAGAACCCAAGACTGGGGTTGGACAGCAGGATTCCAGCCCTGTTCTGCCGCCAGTCGATGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS CAA 72 bp AGAACAGGGCTGGAATCCTGCTGTCCAACCCCAGTCTaGGGTTCTTCCTCCACACCATGCTGGCACCACAGC +
Preference number: 6 (lower is better)
Translates to: RTGLESCCPTPV*GSSSTPCWHHS
Trigger: GCTGTGGTGCCAGCATGGTGTGGAGGAAGAACCCAAGACTGGGGTTGGACAGCAGGATTCCAGCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567189.5
CDS GCA 72 bp CTGACAGCTGGGCTCCCCGTGGTGGAAGGCTGCCCCTaGCTCACAGTGTTGCTGCAAATACAGTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LTAGLPVVEGCP*LTVLLQIQFLL
Trigger: AAGAAGAAACTGTATTTGCAGCAACACTGTGAGGCAGGGGCAGCCTTCCACCACGGGGAGCCCAGCTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563584.5
CDS CAA 72 bp CAGACACAACCTCAAGCCCAGGTGTCTTTACCTTCTTaGCTGTCAGAGTGTTTCAGAGGCTGCAGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: QTQPQAQVSLPS*LSECFRGCRAV
Trigger: GACAGCCCTGCAGCCTCTGAAACACTCTGACAGCAAAGAAGGTAAAGACACCTGGGCTTGAGGTTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS CAA 90 bp GTGCATACACAGACACAACCTCAAGCCCAGGTGTCTTTACCTTCTTaGCTGTCAGAGTGTTTCAGAGGCTGCAGGGCTGTCTTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: VHTQTQPQAQVSLPS*LSECFRGCRAVLEP
Trigger: AGGCTCCAAGACAGCCCTGCAGCCTCTGAAACACTCTGACAGCAAAGAAGGTAAAGACACCTGGGCTTGAGGTTGTGTCTGTGTATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS GCA 72 bp AGACACAACCTCAAGCCCAGGTGTCTTTACCTTCTTTaGTGTCAGAGTGTTTCAGAGGCTGCAGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RHNLKPRCLYLL*CQSVSEAAGLS
Trigger: AGACAGCCCTGCAGCCTCTGAAACACTCTGACAGCAAAGAAGGTAAAGACACCTGGGCTTGAGGTTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561213.5
CDS CAA 90 bp CCTCAGCTCCTGCAAAGGCAAGAACTCAGAATAAACAAAAATCTTTaGCAAGCCCATTTTCATGCCAGCACTTTCCCACCTGAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: PQLLQRQELRINKNL*QAHFHASTFPPESA
Trigger: TGCACTCTCAGGTGGGAAAGTGCTGGCATGAAAATGGGCTTGCAAAAGATTTTTGTTTATTCTGAGTTCTTGCCTTTGCAGGAGCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559978.1