RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD274 (Homo sapiens)

Ensembl gene IDs: ENSG00000120217

Ensembl transcript IDs: ENST00000381573.8, ENST00000381577.4, ENST00000474218.1, ENST00000492923.1, ENST00000498261.1

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATCCTTTCTCCCTGTCACAGGCGTCGATGAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTTGACTCCATC +
Preference number: 1 (lower is better)
Translates to: YPFSLSQASMSPSGI*KYQGLPPGSLFDSI
Trigger: GATGGAGTCAAACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACAGGGAGAAAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp GGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGATaGGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCT +
Preference number: 1 (lower is better)
Translates to: GSLFRSILSPCHRRR*APQAFESIKVSLQA
Trigger: AGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR GCA 90 bp CTTTCTTCATTCTCCTCCTCTGCTTTCGCCAGGTTCCATTTTCAGTaGTTGGGCCTTTTAAGTCCCACATTGCCTGCATCCCACGGGCCC +
Preference number: 1 (lower is better)
Translates to: LSSFSSSAFARFHFQ*LGLLSPTLPASHGP
Trigger: GGGCCCGTGGGATGCAGGCAATGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCTGGCGAAAGCAGAGGAGGAGAATGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp ATATGGCCAAGAGGGAAAGGAAACTCTGGGATCTCCCAGGGCATCTaGATCTCGAAACCTCCAGGAAGCCTCTTAGGAGGGCTGTGTAGT +
Preference number: 1 (lower is better)
Translates to: IWPRGKGNSGISQGI*ISKPPGSLLGGLCS
Trigger: ACTACACAGCCCTCCTAAGAGGCTTCCTGGAGGTTTCGAGATTCAGATGCCCTGGGAGATCCCAGAGTTTCCTTTCCCTCTTGGCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR GCA 90 bp AACCGTCCCAGACCACATTGGCCTATTTCCTCCTCTTGGCAACACTaGTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGACACTGGA +
Preference number: 1 (lower is better)
Translates to: NRPRPHWPISSSWQH*SGFPLASSLCYDTG
Trigger: TCCAGTGTCATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 90 bp AGCTGGTGGCATTCAAGGGTTCAAGCACAACGAATGAGGCTTTTCTaGCACAGGGTAGCTAGCAGTCAAGGTACACTGCCGGAATTTCCA +
Preference number: 1 (lower is better)
Translates to: SWWHSRVQAQRMRLF*HRVASSQGTLPEFP
Trigger: TGGAAATTCCGGCAGTGTACCTTGACTGCTAGCTACCCTGTGCCAGAAAAGCCTCATTCGTTGTGCTTGAACCCTTGAATGCCACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp TGTCCCGTTCCAACACTGAGACTCTCAGTCATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAAAGGGCACTTCTGCAGGAACTGACC +
Preference number: 1 (lower is better)
Translates to: CPVPTLRLSVMQKTN*GIEWRQRALLQELT
Trigger: GGTCAGTTCCTGCAGAAGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 90 bp AGTATATCCAACCGTCCCAGACCACATTGGCCTATTTCCTCCTCTTaGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTAT +
Preference number: 1 (lower is better)
Translates to: SISNRPRPHWPISSS*QHCSGFPLASSLCY
Trigger: ATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTGGATATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp TTCTTCAGCCTTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTaGCACCAGAATATGGCCAAGAGGGAAAGGAAACTCTGGGATCTC +
Preference number: 1 (lower is better)
Translates to: FFSLDMWQSQGTPCH*HQNMAKRERKLWDL
Trigger: GAGATCCCAGAGTTTCCTTTCCCTCTTGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp GGAACTGACCCTCAAATTAGGGATTCTCAACCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTTGGAGGCTCCTTGTTCAGAAGTATC +
Preference number: 1 (lower is better)
Translates to: GTDPQIRDSQPVFLG*AMDDLLGGSLFRSI
Trigger: GATACTTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTGCTCATCCTAGGAAGACGGGTTGAGAATCCCTAATTTGAGGGTCAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp TCCAACACTGAGACTCTCAGTCATGCAGAAAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACTTCTGCAGGAACTGACCCTCAAATT +
Preference number: 1 (lower is better)
Translates to: SNTETLSHAENKLRH*VEAKGTSAGTDPQI
Trigger: AATTTGAGGGTCAGTTCCTGCAGAAGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCATGACTGAGAGTCTCAGTGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp CAGATAACACAAGGAGCTCTGTTGGAGACACTGTTTCTTCAGCCTTaGCATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAA +
Preference number: 1 (lower is better)
Translates to: QITQGALLETLFLQP*HVAKPRYSLSLTPE
Trigger: TTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTGTTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp GCAGAATTAGGTATCATCTCTGCCTATGCCATTTACGATGAAACATaGGACAAAAGGGATAAAGTGCCTTACAAATCCAACACCACAAGG +
Preference number: 1 (lower is better)
Translates to: AELGIISAYAIYDET*DKRDKVPYKSNTTR
Trigger: CCTTGTGGTGTTGGATTTGTAAGGCACTTTATCCCTTTTGTCTCATGTTTCATCGTAAATGGCATAGGCAGAGATGATACCTAATTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 90 bp AATATAGCTGTAAATTGTATTATAAAAGGACAGTGGGTGGCAGTCTaGGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTT +
Preference number: 1 (lower is better)
Translates to: NIAVNCIIKGQWVAV*GLLFTGLGKLLNLF
Trigger: AAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGACTGCCACCCACTGTCCTTTTATAATACAATTTACAGCTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCCACGCTCAGCCCCGATaGACCCCTAAACCACAGGTT +
Preference number: 2 (lower is better)
Translates to: WPISSSWQHCSGFPLASSHAQPR*TPKPQV
Trigger: AACCTGTGGTTTAGGGGTTCATCGGGGCTGAGCGTG...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCCAGTGGGTGGCAGTCTaGGGTCTGCTATTTACTGGT +
Preference number: 2 (lower is better)
Translates to: WPISSSWQHCSGFPLASSQWVAV*GLLFTG
Trigger: ACCAGTAAATAGCAGACCTCAGACTGCCACCCACTG...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp TCTTCATTCTCCTCCTCTGCTTTCGCCAGGTTCCATTTTCAGTGCTaGGGCCTTTTAAGTCCCACATTGCCTGCATCCCACGGGCCCATT +
Preference number: 2 (lower is better)
Translates to: SSFSSSAFARFHFQC*GLLSPTLPASHGPI
Trigger: AATGGGCCCGTGGGATGCAGGCAATGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCTGGCGAAAGCAGAGGAGGAGAATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCACAGTGGGTGGCAGTCTaGGGTCTGCTATTTACTGGT +
Preference number: 2 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAQWVAV*GLLFTG
Trigger: ACCAGTAAATAGCAGACCTCAGACTGCCACCCACTG...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTT +
Preference number: 2 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMPVFLG*AMDDLL
Trigger: AAGCAAATCATCCATTGCTCATCCTAGGAAGACGGG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAAAGTCCCACATTGCCTaGATCCCACGGGCCCATTCC +
Preference number: 2 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGKSHIA*IPRAHS
Trigger: GGAATGGGCCCGTGGGATGCAGGCAATGTGGGACTT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp CCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTaGACTCCATCTTTCTTCATTCTCCTCCTCTGCTTTCGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: PQAFESIKVSLQAPC*TPSFFILLLCFRQV
Trigger: AACCTGGCGAAAGCAGAGGAGGAGAATGAAGAAAGATGGAGTCAAACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp AAGTATATCCAACCGTCCCAGACCACATTGGCCTATTTCCTCCTCTaGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTA +
Preference number: 2 (lower is better)
Translates to: KYIQPSQTTLAYFLL*ATLLGFSPRIILML
Trigger: TAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTGGATATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAACAACCACACTCACATaGCAAGAAGACCTCACAGAC +
Preference number: 2 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQATTTLT*QEDLTD
Trigger: GTCTGTGAGGTCTTCTTGTCATGTGAGTGTGGTTGT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCATGCAACCAACGGTTTaGTCTTTATGCTTCCAATGT +
Preference number: 2 (lower is better)
Translates to: WPISSSWQHCSGFPLASSMQPTV*SLCFQC
Trigger: ACATTGGAAGCATAAAGATCAAACCGTTGGTTGCAT...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAATCTCCCAGGGCATCTaGATCTCGAAACCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPISQGI*ISKPPG
Trigger: TCCTGGAGGTTTCGAGATTCAGATGCCCTGGGAGAT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAGGGAAAGGAAACTCTaGGATCTCCCAGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPRERKL*DLPGHL
Trigger: CAGATGCCCTGGGAGATCCCAGAGTTTCCTTTCCCT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPSPSGI*KYQGLP
Trigger: AGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCACCATGGGTCTCCTTTTaGGCAAACATAAACAAATCC +
Preference number: 2 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAPWVSF*ANINKS
Trigger: GGATTTGTTTATGTTTGCTCAAAAGGAGACCCATGG...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAAAAGGCAGTAGCAGTTaGTTCTGGAAAGGAAACTTG +
Preference number: 2 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAKGSSS*FWKGNL
Trigger: CAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp ACAGATAACACAAGGAGCTCTGTTGGAGACACTGTTTCTTCAGCCTaGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGA +
Preference number: 2 (lower is better)
Translates to: TDNTRSSVGDTVSSA*TCGKAKVLLVIDTR
Trigger: TCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTGTTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGGCAGCAAGTTTAGTTTaGCGACAAAATTGTAACATC +
Preference number: 2 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMAASLV*RQNCNI
Trigger: GATGTTACAATTTTGTCGCCAAACTAAACTTGCTGC...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTGCTATTTACTGGTTTaGGCAAGTTACTTAATCTGT +
Preference number: 2 (lower is better)
Translates to: WPISSSWQHCSGFPLASSCYLLV*ASYLIC
Trigger: ACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCA...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp CTGATTATTAAGATGTTTAAGTATATCCAACCGTCCCAGACCACATaGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LIIKMFKYIQPSQTT*AYFLLLATLLGFSP
Trigger: AGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTGGATATACTTAAACATCTTAATAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCATCTGGAAAGGAAACTTaGATGGCTTGGAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPSGKET*MAWRMK
Trigger: CTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGA...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGATTCATTCTCCTCCTCTaGTTTCGCCAGGTTCCATTT +
Preference number: 2 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGFILLL*FRQVPF
Trigger: AAATGGAACCTGGCGAAAGCAGAGGAGGAGAATGAA...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGATTGAGAATCCCTGCTTaGAGATCAGAAGTTCCAATG +
Preference number: 2 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGLRIPA*RSEVPM
Trigger: CATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAA...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACACGCTCAGCCCCGATaGACCCCTAAACCACAGGTT +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVHAQPR*TPKPQV
Trigger: AACCTGTGGTTTAGGGGTTCATCGGGGCTGAGCGTG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SEVCYLLVWASYLICLLPSPSGI*KYQGLP
Trigger: AGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATGTCCCGTTCCAACACTaGGACTCTCAGTCATGCAGA +
Preference number: 2 (lower is better)
Translates to: MPGTAIDIARALNKWFLNVPFQH*DSQSCR
Trigger: TCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGAC...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAGCAATGGATGATTTaGTTGGAGGCTCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDEQWMI*LEAPCS
Trigger: TGAACAAGGAGCCTCCAAGCAAATCATCCATTGCTC...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACTGTCACAGGCGTCGATaGGCCCCTCAGGCATTTGAA +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNCHRRR*APQAFE
Trigger: TTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACA...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACT +
Preference number: 2 (lower is better)
Translates to: SEVCYLLVWASYLICLLPNKLRH*VEAKGT
Trigger: AGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAAGGTTCCATTTTCAGTaGTTGGGCCTTTTAAGTCCC +
Preference number: 2 (lower is better)
Translates to: VDYVPCSATILACNSHKERFHFQ*LGLLSP
Trigger: GGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAAAAGGTGACATCCTATaGAACCAACGGTTTGATCTT +
Preference number: 2 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGKGDIL*NQRFDL
Trigger: AAGATCAAACCGTTGGTTGCATAGGATGTCACCTTT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 90 bp ATCTCCTCATTATACTATGAGCTCCTTGAGGACAGGTACTTTGTCTaGCTCACATCTGTAGATTCAATGCCTGGCACAGCGATTGATATT +
Preference number: 2 (lower is better)
Translates to: ISSLYYELLEDRYFV*LTSVDSMPGTAIDI
Trigger: AATATCAATCGCTGTGCCAGGCATTGAATCTACAGATGTGAGCAAGACAAAGTACCTGTCCTCAAGGAGCTCATAGTATAATGAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGCCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTT +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLEPVFLG*AMDDLL
Trigger: AAGCAAATCATCCATTGCTCATCCTAGGAAGACGGG...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: VDYVPCSATILACNSHKEMQKTN*GIEWRQ
Trigger: TTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCAT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAGTCCCGTTCCAACACTaGGACTCTCAGTCATGCAGA +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVVPFQH*DSQSCR
Trigger: TCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGAC...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGACAACCACACTCACATaGCAAGAAGACCTCACAGAC +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLETTTLT*QEDLTD
Trigger: GTCTGTGAGGTCTTCTTGTCATGTGAGTGTGGTTGT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGTTACAGCGATGAAATaGGATTATGTGTGTAGGCTA +
Preference number: 2 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDVTAMK*DYVCRL
Trigger: TAGCCTACACACATAATCTCATTTCATCGCTGTAAC...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGGGTACTCCTTGTCATTaGCACCAGAATATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLEGTPCH*HQNMAK
Trigger: CTTGGCCATATTCTGGTGTCAATGACAAGGAGTACC...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAATTGACACCAGAATATaGCCAAGAGGGAAAGGAAAC +
Preference number: 2 (lower is better)
Translates to: VDYVPCSATILACNSHKEIDTRI*PRGKGN
Trigger: GTTTCCTTTCCCTCTTGGCCATATTCTGGTGTCAAT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACT +
Preference number: 2 (lower is better)
Translates to: TVTPITVQMHMYKQITQGNKLRH*VEAKGT
Trigger: AGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAAGCTGATATTTAAATaGAACAGATACTGCACAGAC +
Preference number: 2 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPKLIFK*NRYCTD
Trigger: GTCTGTGCAGTATCTGTTCCATTTAAATATCAGCTT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGATGGATCCTCAGCCCTaGGAACTTCAAATTCATTCC +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLEMDPQP*ELQIHS
Trigger: GGAATGAATTTGAAGTTCCCAGGGCTGAGGATCCAT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAAGTGATGACAGCTGGTaGCATTCAAGGGTTCAAGCA +
Preference number: 2 (lower is better)
Translates to: TVTPITVQMHMYKQITQGSDDSW*HSRVQA
Trigger: TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGTGTAGTGATGACAGCTaGTGGCATTCAAGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLECSDDS*WHSRVQ
Trigger: TTGAACCCTTGAATGCCACCAGCTGTCATCACTACA...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACTCCAGGCTCCCTGTTTaGCTCCATCTTTCTTCATTC +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNSRLPV*LHLSSF
Trigger: GAATGAAGAAAGATGGAGTCAAACAGGGAGCCTGGA...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: MPGTAIDIARALNKWFLNMQKTN*GIEWRQ
Trigger: TTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCAT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACGGTACTCCTTGTCATTaGCACCAGAATATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNGTPCH*HQNMAK
Trigger: CTTGGCCATATTCTGGTGTCAATGACAAGGAGTACC...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACCTATTTCCTCCTCTTaGCAACACTGCTCGGGTTTT +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVPISSS*QHCSGF
Trigger: AAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAATCCAACCATCTCCCATaGGATCTTTTGAATTTTGAA +
Preference number: 2 (lower is better)
Translates to: VDYVPCSATILACNSHKESNHLP*DLLNFE
Trigger: TTCAAAATTCAAAAGATCCCATGGGAGATGGTTGGA...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACAGGTTGAGAATCCCTaGTTGAAGATCAGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVQVENP*LKIRSS
Trigger: GGAACTTCTGATCTTCAAGCAGGGATTCTCAACCTG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAAGGTTCCATTTTCAGTaGTTGGGCCTTTTAAGTCCC +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVRFHFQ*LGLLSP
Trigger: GGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCT...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR GCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAAAGGTGACATCCTATaGAACCAACGGTTTGATCTT +
Preference number: 2 (lower is better)
Translates to: MPGTAIDIARALNKWFLNKGDIL*NQRFDL
Trigger: AAGATCAAACCGTTGGTTGCATAGGATGTCACCTTT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTGCAGCAAGTTTAGTTTaGCGACAAAATTGTAACATC +
Preference number: 2 (lower is better)
Translates to: SEVCYLLVWASYLICLLPAASLV*RQNCNI
Trigger: GATGTTACAATTTTGTCGCCAAACTAAACTTGCTGC...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACATGGATCCTCAGCCCTaGGAACTTCAAATTCATTCC +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNMDPQP*ELQIHS
Trigger: GGAATGAATTTGAAGTTCCCAGGGCTGAGGATCCAT...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACTGTAGTGATGACAGCTaGTGGCATTCAAGGGTTCAA +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNCSDDS*WHSRVQ
Trigger: TTGAACCCTTGAATGCCACCAGCTGTCATCACTACA...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTATTGAGAATCCCTGCTTaGAGATCAGAAGTTCCAATG +
Preference number: 2 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVLRIPA*RSEVPM
Trigger: CATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAA...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGTCCCATGGGATCTTTTaGATTTTGAATCATGGAAAG +
Preference number: 2 (lower is better)
Translates to: ITVQMHMYKQITQGALLESHGIF*ILNHGK
Trigger: CTTTCCATGATTCAAAATTCAAAAGATCCCATGGGA...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACATGCAACCAACGGTTTaGTCTTTATGCTTCCAATGT +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNMQPTV*SLCFQC
Trigger: ACATTGGAAGCATAAAGATCAAACCGTTGGTTGCAT...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACGTTACAGCGATGAAATaGGATTATGTGTGTAGGCTA +
Preference number: 2 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNVTAMK*DYVCRL
Trigger: TAGCCTACACACATAATCTCATTTCATCGCTGTAAC...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAAGCTGATATTTAAATaGAACAGATACTGCACAGAC +
Preference number: 2 (lower is better)
Translates to: MPGTAIDIARALNKWFLNKLIFK*NRYCTD
Trigger: GTCTGTGCAGTATCTGTTCCATTTAAATATCAGCTT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGATCCAACCATCTCCCATaGGATCTTTTGAATTTTGAA +
Preference number: 2 (lower is better)
Translates to: TVTPITVQMHMYKQITQGSNHLP*DLLNFE
Trigger: TTCAAAATTCAAAAGATCCCATGGGAGATGGTTGGA...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTGCCCATTCCTTCCTCTaGTCACGCTCAGCCCCGATG +
Preference number: 3 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVAHSFL*SRSAPM
Trigger: CATCGGGGCTGAGCGTGACAAGAGGAAGGAATGGGC...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCCTTTTAAGTCCCACATaGCCTGCATCCCACGGGCCC +
Preference number: 3 (lower is better)
Translates to: WPISSSWQHCSGFPLASSLLSPT*PASHGP
Trigger: GGGCCCGTGGGATGCAGGCAATGTGGGACTTAAAAG...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp TCCCTGTCACAGGCGTCGATGAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: SLSQASMSPSGI*KYQGLPPGSLF
Trigger: AAACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp AACCGTCCCAGACCACATTGGCCTATTTCCTCCTCTTaGCAACACTGCTCGGGTTTTCCCCTCGCATCATCC +
Preference number: 3 (lower is better)
Translates to: NRPRPHWPISSS*QHCSGFPLASS
Trigger: GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp AGAGGGAAAGGAAACTCTGGGATCTCCCAGGGCATCTaGATCTCGAAACCTCCAGGAAGCCTCTTAGGAGGG +
Preference number: 3 (lower is better)
Translates to: RGKGNSGISQGI*ISKPPGSLLGG
Trigger: CCCTCCTAAGAGGCTTCCTGGAGGTTTCGAGATTCAGATGCCCTGGGAGATCCCAGAGTTTCCTTTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp GGAAGCCTCTTAGGAGGGCTGTGTAGTGATGACAGCTaGTGGCATTCAAGGGTTCAAGCACAACGAATGAGG +
Preference number: 3 (lower is better)
Translates to: GSLLGGLCSDDS*WHSRVQAQRMR
Trigger: CCTCATTCGTTGTGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp CATTCAAGGGTTCAAGCACAACGAATGAGGCTTTTCTaGCACAGGGTAGCTAGCAGTCAAGGTACACTGCCG +
Preference number: 3 (lower is better)
Translates to: HSRVQAQRMRLF*HRVASSQGTLP
Trigger: CGGCAGTGTACCTTGACTGCTAGCTACCCTGTGCCAGAAAAGCCTCATTCGTTGTGCTTGAACCCTTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp AGCCTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTaGCATTCAAGGGTTCAAGCACAACGAATGAGGCTT +
Preference number: 3 (lower is better)
Translates to: SLLGGLCSDDSW*HSRVQAQRMRL
Trigger: AAGCCTCATTCGTTGTGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCAATGGATGATTTGCTaGGAGGCTCCTTGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMQWMIC*EAPCSE
Trigger: TTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp TTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGATaGGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: FRSILSPCHRRR*APQAFESIKVS
Trigger: GGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTGTTGAGAATCCCTGCTaGAAGATCAGAAGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVVENPC*KIRSSN
Trigger: ATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAAC...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCATTCCATTTTCAGTGCTaGGGCCTTTTAAGTCCCACA +
Preference number: 3 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAFHFQC*GLLSPT
Trigger: TGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAA...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTATGCAACCAACGGTTaGATCTTTATGCTTCCAATG +
Preference number: 3 (lower is better)
Translates to: WPISSSWQHCSGFPLASSYATNG*IFMLPM
Trigger: CATTGGAAGCATAAAGATCAAACCGTTGGTTGCATA...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp GAGACTCTCAGTCATGCAGAAAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACTTCTGCAGGAACTGAC +
Preference number: 3 (lower is better)
Translates to: ETLSHAENKLRH*VEAKGTSAGTD
Trigger: GTCAGTTCCTGCAGAAGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCATGACTGAGAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp CCAACACTGAGACTCTCAGTCATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAAAGGGCACTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: PTLRLSVMQKTN*GIEWRQRALLQ
Trigger: CTGCAGAAGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCATGACTGAGAGTCTCAGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp CAAGGAGCTCTGTTGGAGACACTGTTTCTTCAGCCTTaGCATGTGGCAAAGCCAAGGTACTCCTTGTCATTG +
Preference number: 3 (lower is better)
Translates to: QGALLETLFLQP*HVAKPRYSLSL
Trigger: CAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp AGATGTTTAAGTATATCCAACCGTCCCAGACCACATTaGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGT +
Preference number: 3 (lower is better)
Translates to: RCLSISNRPRPH*PISSSWQHCSG
Trigger: ACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTGGATATACTTAAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp AAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATaGCCAAGAGGGAAAGGAAACTCTGGGATCTCCCAG +
Preference number: 3 (lower is better)
Translates to: KAKVLLVIDTRI*PRGKGNSGISQ
Trigger: CTGGGAGATCCCAGAGTTTCCTTTCCCTCTTGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCATATACTATGAGCTCCTaGAGGACAGGTACTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAYTMSS*RTGTLS
Trigger: AGACAAAGTACCTGTCCTCAAGGAGCTCATAGTATA...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAAACAAATTGAGGCATaGAGTGGAGGCAAAGGGCAC +
Preference number: 3 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPKQIEA*SGGKGH
Trigger: GTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp GGATTCTCAACCCGTCTTCCTAGGATGAGCAATGGATaGTTTGCTTGGAGGCTCCTTGTTCAGAAGTATCCT +
Preference number: 3 (lower is better)
Translates to: GFSTRLPRMSNG*FAWRLLVQKYP
Trigger: AGGATACTTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTGCTCATCCTAGGAAGACGGGTTGAGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp CCTCAAATTAGGGATTCTCAACCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTTGGAGGCTCCTTGTTC +
Preference number: 3 (lower is better)
Translates to: PQIRDSQPVFLG*AMDDLLGGSLF
Trigger: GAACAAGGAGCCTCCAAGCAAATCATCCATTGCTCATCCTAGGAAGACGGGTTGAGAATCCCTAATTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CCA 72 bp AGTGGGTGGCAGTCTGAGGTCTGCTATTTACTGGTTTaGGCAAGTTACTTAATCTGTTTGCTTCCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: SGWQSEVCYLLV*ASYLICLLPQL
Trigger: CAGCTGAGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGACTGCCACCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAGCCCATTCCTTCCTCTaGTCACGCTCAGCCCCGATG +
Preference number: 3 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVAHSFL*SRSAPM
Trigger: CATCGGGGCTGAGCGTGACAAGAGGAAGGAATGGGC...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGGCCTATTTCCTCCTCTaGGCAACACTGCTCGGGTTT +
Preference number: 3 (lower is better)
Translates to: ITVQMHMYKQITQGALLEAYFLL*ATLLGF
Trigger: AAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGC...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp AGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCTTCCATTTTCAGTGCTaGGGCCTTTTAAGTCCCACA +
Preference number: 3 (lower is better)
Translates to: SCFWKGNLNGLEDEVEIFFHFQC*GLLSPT
Trigger: TGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAA...GAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTCAATGGATGATTTGCTaGGAGGCTCCTTGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: SEVCYLLVWASYLICLLPQWMIC*EAPCSE
Trigger: TTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTG...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCACTCCCATGGGATCTTTaGAATTTTGAATCATGGAAA +
Preference number: 3 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPLPWDL*NFESWK
Trigger: TTTCCATGATTCAAAATTCAAAAGATCCCATGGGAG...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAATTCTGGAAAGGAAACTaGAATGGCTTGGAGGATGAA +
Preference number: 3 (lower is better)
Translates to: VDYVPCSATILACNSHKEFWKGN*NGLEDE
Trigger: TTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAA...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAAAACAAATTGAGGCATaGAGTGGAGGCAAAGGGCAC +
Preference number: 3 (lower is better)
Translates to: TVTPITVQMHMYKQITQGKQIEA*SGGKGH
Trigger: GTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAATACTGCACAGACACTaGAGGTCTGAGAATAAGATT +
Preference number: 3 (lower is better)
Translates to: VDYVPCSATILACNSHKEILHRH*RSENKI
Trigger: AATCTTATTCTCAGACCTCAAGTGTCTGTGCAGTAT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAACTGTTTCTTCAGCCTaGACATGTGGCAAAGCCAAG +
Preference number: 3 (lower is better)
Translates to: TVTPITVQMHMYKQITQGTVSSA*TCGKAK
Trigger: CTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGGTTGAGAATCCCTGCTaGAAGATCAGAAGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: ITVQMHMYKQITQGALLEVENPC*KIRSSN
Trigger: ATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAAC...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR-3UTR CAA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGAAGCCAAGGTACTCCTaGTCATTGACACCAGAATAT +
Preference number: 3 (lower is better)
Translates to: ITVQMHMYKQITQGALLEKPRYS*SLTPEY
Trigger: ATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp GTAAATTGTATTATAAAAGGACAGTGGGTGGCAGTCTaGGGTCTGCTATTTACTGGTTTGGGCAAGTTACTT +
Preference number: 3 (lower is better)
Translates to: VNCIIKGQWVAV*GLLFTGLGKLL
Trigger: AAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGACTGCCACCCACTGTCCTTTTATAATACAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp GGTATCATCTCTGCCTATGCCATTTACGATGAAACATaGGACAAAAGGGATAAAGTGCCTTACAAATCCAAC +
Preference number: 3 (lower is better)
Translates to: GIISAYAIYDET*DKRDKVPYKSN
Trigger: GTTGGATTTGTAAGGCACTTTATCCCTTTTGTCTCATGTTTCATCGTAAATGGCATAGGCAGAGATGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR GCA 72 bp CAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATaGTATGACACTGGACTAAATTGTAATAATACATTT +
Preference number: 3 (lower is better)
Translates to: QHCSGFPLASSL*YDTGLNCNNTF
Trigger: AAATGTATTATTACAATTTAGTCCAGTGTCATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp AAAAACTCATACATAAATACTGTCCCGTTCCAACACTaGGACTCTCAGTCATGCAGAAAACAAATTGAGGCA +
Preference number: 3 (lower is better)
Translates to: KNSYINTVPFQH*DSQSCRKQIEA
Trigger: TGCCTCAATTTGTTTTCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGACAGTATTTATGTATGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp AGTGGTTATCACAACAGGGTGGTTACAGCGATGAAATaGGATTATGTGTGTAGGCTACCACATAATTGTAAA +
Preference number: 3 (lower is better)
Translates to: SGYHNRVVTAMK*DYVCRLPHNCK
Trigger: TTTACAATTATGTGGTAGCCTACACACATAATCTCATTTCATCGCTGTAACCACCCTGTTGTGATAACCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR TCA 72 bp TCAAGGTACACTGCCGGAATTTCCAGAAAGAAAATGTaGTTTTGCAAGTACAGCATCAAAGTGAAGTTTATA +
Preference number: 3 (lower is better)
Translates to: SRYTAGISRKKM*FCKYSIKVKFI
Trigger: TATAAACTTCACTTTGATGCTGTACTTGCAAAATCACATTTTCTTTCTGGAAATTCCGGCAGTGTACCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR GCA 72 bp CAGAGTATTAATGGGTTAAATAAAGGTGACATCCTATaGAACCAACGGTTTGATCTTTATGCTTCCAATGTA +
Preference number: 3 (lower is better)
Translates to: QSINGLNKGDIL*NQRFDLYASNV
Trigger: TACATTGGAAGCATAAAGATCAAACCGTTGGTTGCATAGGATGTCACCTTTATTTAACCCATTAATACTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGGGAGCCTCGGGAAGCTaGGCAGAACTGGGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMGASGS*AELGPR
Trigger: GCGCGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCC...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS-3UTR CCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAGGACAGAAGCGCGGCTaGTGCGGAGCCTCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRGQKRG*CGASGS
Trigger: GCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCC...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAGAAGCTGCGCAGAACTaGGGCCGCGCGGGACGCGCC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPEAAQN*GRAGRA
Trigger: GGCGCGTCCCGCGCGGCCCCAGTTCTGCGCAGCTTC...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTCGGCACCACCATAGCTaGTCATGCAGCGGTACACCC +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVRHHHS*SCSGTP
Trigger: GGGTGTACCGCTGCATGATCAGCTATGGTGGTGCCG...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381577.4
3UTR CAA 72 bp CTCCCTGTCACAGGCGTCGATGAGCCCCTCAGGCATTaGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPVTGVDEPLRH*KVSRSPSRLPV
Trigger: AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTCACTGCTTGTCCAGATaGCTTCGGCCTTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVHCLSR*LRPWGS
Trigger: GCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTG...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCACAGAAGCGCGGCTGGTaGGGAGCCTCGGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPQKRGW*GASGSC
Trigger: GCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTG...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAGGACAGAAGCGCGGCTaGTGCGGAGCCTCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGGQKRG*CGASGS
Trigger: GCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCC...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp CAACCGTCCCAGACCACATTGGCCTATTTCCTCCTCTaGGCAACACTGCTCGGGTTTTCCCCTCGCATCATC +
Preference number: 4 (lower is better)
Translates to: QPSQTTLAYFLL*ATLLGFSPRII
Trigger: GATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCTTACCACTCAGGACTTaGTGGTCACTGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSLPLRT*WSLLVQ
Trigger: CTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAA...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGATGTCACAGGCGTCGATaGGCCCCTCAGGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRCHRRR*APQAFE
Trigger: TTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACA...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCATATCCTCATCTTTCTaGAATGCCCTGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSISSSF*NALQAD
Trigger: GTCCGCCTGCAGGGCATTCCAGAAAGATGAGGATAT...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp TCCTCCTCTGCTTTCGCCAGGTTCCATTTTCAGTGCTaGGGCCTTTTAAGTCCCACATTGCCTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSAFARFHFQC*GLLSPTLPASH
Trigger: GTGGGATGCAGGCAATGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCTGGCGAAAGCAGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCGTGTGCTGGTCACATTaGAAAGCTTCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: WPISSSWQHCSGFPLASSVCWSH*KASPLS
Trigger: AGAGAGAGGAGAAGCTTTTCAATGTGACCAGCACAC...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCTCCAGGCTCCCTGTTTaGCTCCATCTTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSSRLPV*LHLSSF
Trigger: GAATGAAGAAAGATGGAGTCAAACAGGGAGCCTGGA...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVSPSGI*KYQGLP
Trigger: AGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCT...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCCCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSPVFLG*AMDDLL
Trigger: AAGCAAATCATCCATTGCTCATCCTAGGAAGACGGG...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAGTCCCGTTCCAACACTaGGACTCTCAGTCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAVPFQH*DSQSCR
Trigger: TCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGAC...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCGGTACTCCTTGTCATTaGCACCAGAATATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSGTPCH*HQNMAK
Trigger: CTTGGCCATATTCTGGTGTCAATGACAAGGAGTACC...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCTGTTTCTTCAGCCTTaGCATGTGGCAAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMLFLQP*HVAKPR
Trigger: CCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCATTTCCCAGGGAGAGCTaGTCCTTCAACAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPFPRES*SFNSRA
Trigger: GGCCCGGCTGTTGAAGGACCAGCTCTCCCTGGGAAA...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCCTCTCTTGGAATTGGTaGTGGTGGTCTTACCACTCA +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSLSWNW*WWSYHS
Trigger: TGAGTGGTAAGACCACCACCACCAATTCCAAGAGAG...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCCACAAGGAGCTCTGTTaGAGACACTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSHKELC*RHCFFS
Trigger: GCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTG...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGGAGGTAGTTCTGGGATaGCCAATTCAGCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMEVVLG*PIQLYG
Trigger: ACCATACAGCTGAATTGGTCATCCCAGAACTACCTC...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGACAACCACACTCACATaGCAAGAAGACCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMTTTLT*QEDLTD
Trigger: GTCTGTGAGGTCTTCTTGTCATGTGAGTGTGGTTGT...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTGGTACTCCTTGTCATTaGCACCAGAATATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVGTPCH*HQNMAK
Trigger: CTTGGCCATATTCTGGTGTCAATGACAAGGAGTACC...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGCAGAAGCGCGGCTGGTaGGGAGCCTCGGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEQKRGW*GASGSC
Trigger: GCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTG...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp TTCCATTTTCAGTGCTTGGGCCTTTTAAGTCCCACATaGCCTGCATCCCACGGGCCCATTCCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: FHFQCLGLLSPT*PASHGPIPSSC
Trigger: ACAAGAGGAAGGAATGGGCCCGTGGGATGCAGGCAATGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGGTTCATGTTCAGAGGTaGCTGGATCCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMVHVQR*LDPQPK
Trigger: TTTTGGTTGTGGATCCAGTCACCTCTGAACATGAAC...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAGAGGTAGTTCTGGGATaGCCAATTCAGCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAEVVLG*PIQLYG
Trigger: ACCATACAGCTGAATTGGTCATCCCAGAACTACCTC...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGTCTGGAAAGGAAACTTaGATGGCTTGGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMSGKET*MAWRMK
Trigger: CTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGA...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAATCTGTGATCTGAAGTaGAGCATTTCCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRICDLK*SISQGE
Trigger: CTCTCCCTGGGAAATGCTGCACTTCAGATCACAGAT...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGACCTATTTCCTCCTCTTaGCAACACTGCTCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRPISSS*QHCSGF
Trigger: AAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGG...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGATGGATCCTCAGCCCTaGGAACTTCAAATTCATTCC +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMMDPQP*ELQIHS
Trigger: GGAATGAATTTGAAGTTCCCAGGGCTGAGGATCCAT...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCATTCAGCCTTGACATGTaGCAAAGCCAAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAFSLDM*QSQGTP
Trigger: AGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAA...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGACACAAGGAGCTCTGTTaGAGACACTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRHKELC*RHCFFS
Trigger: GCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTG...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTGTCACAGGCGTCGATaGGCCCCTCAGGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDCHRRR*APQAFE
Trigger: TTCAAATGCCTGAGGGGCTCATCGACGCCTGTGACA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGAAGAACATATGAATaGAAGGCAGTAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSRRTYE*KAVAVA
Trigger: AGCAACTGCTACTGCCTTTCATTCATATGTTCTTCT...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTCCATGGGTCTCCTTTTaGGCAAACATAAACAAATCC +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVPWVSF*ANINKS
Trigger: GGATTTGTTTATGTTTGCTCAAAAGGAGACCCATGG...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGACAGGTTGAGAATCCCTaGTTGAAGATCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRQVENP*LKIRSS
Trigger: GGAACTTCTGATCTTCAAGCAGGGATTCTCAACCTG...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAAGGTTCCATTTTCAGTaGTTGGGCCTTTTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQARFHFQ*LGLLSP
Trigger: GGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCATTCATTCTCCTCCTCTaGTTTCGCCAGGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAFILLL*FRQVPF
Trigger: AAATGGAACCTGGCGAAAGCAGAGGAGGAGAATGAA...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp AAGATGTTTAAGTATATCCAACCGTCCCAGACCACATaGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KMFKYIQPSQTT*AYFLLLATLLG
Trigger: CCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGGTTGGATATACTTAAACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAAGCCCCTCAGGCATTTaGAAGTATCAAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGSPSGI*KYQGLP
Trigger: AGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAMQKTN*GIEWRQ
Trigger: TTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCAT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTCCCATGGGATCTTTTaGATTTTGAATCATGGAAAG +
Preference number: 4 (lower is better)
Translates to: WPISSSWQHCSGFPLASSSHGIF*ILNHGK
Trigger: CTTTCCATGATTCAAAATTCAAAAGATCCCATGGGA...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGATTCAAGCACAACGAATaGGGCTTTTCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGFKHNE*GFSGTG
Trigger: CCCTGTGCCAGAAAAGCCTCATTCGTTGTGCTTGAA...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCTATGCCATTTACGATaGAACATGAGACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMLCHLR*NMRQKG
Trigger: TCCCTTTTGTCTCATGTTTCATCGTAAATGGCATAG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTAAGTCCCACATTGCCTaGATCCCACGGGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SEVCYLLVWASYLICLLPKSHIA*IPRAHS
Trigger: GGAATGGGCCCGTGGGATGCAGGCAATGTGGGACTT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAAAAGGCAGTAGCAGTTaGTTCTGGAAAGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRKGSSS*FWKGNL
Trigger: CAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTT...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAATATCCTCATCTTTCTaGAATGCCCTGCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGISSSF*NALQAD
Trigger: GTCCGCCTGCAGGGCATTCCAGAAAGATGAGGATAT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGACCTCTCTCTTGGAATTaGTGGTGGTGGTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGPLSWN*WWWSYH
Trigger: GTGGTAAGACCACCACCACCAATTCCAAGAGAGAGG...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCGCAGCAAGTTTAGTTTaGCGACAAAATTGTAACATC +
Preference number: 4 (lower is better)
Translates to: WPISSSWQHCSGFPLASSAASLV*RQNCNI
Trigger: GATGTTACAATTTTGTCGCCAAACTAAACTTGCTGC...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGACGAATGAGGCTTTTCTaGCACAGGGTAGCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGRMRLF*HRVASS
Trigger: ACTGCTAGCTACCCTGTGCCAGAAAAGCCTCATTCG...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAATTGACACCAGAATATaGCCAAGAGGGAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRIDTRI*PRGKGN
Trigger: GTTTCCTTTCCCTCTTGGCCATATTCTGGTGTCAAT...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAGTTGATTTTGTTGTATaGGGCGTTCAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAVDFVV*GVQQMP
Trigger: TGGCATTTGCTGAACGCCCCATACAACAAAATCAAC...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCATCCAGGCTCCCTGTTTaGCTCCATCTTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPSRLPV*LHLSSF
Trigger: GAATGAAGAAAGATGGAGTCAAACAGGGAGCCTGGA...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPNKLRH*VEAKGT
Trigger: AGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCGTCCCGTTCCAACACTaGGACTCTCAGTCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SCFWKGNLNGLEDEVEIFVPFQH*DSQSCR
Trigger: TCTGCATGACTGAGAGTCTCAGTGTTGGAACGGGAC...GAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAGTTACAGCGATGAAATaGGATTATGTGTGTAGGCTA +
Preference number: 4 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRVTAMK*DYVCRL
Trigger: TAGCCTACACACATAATCTCATTTCATCGCTGTAAC...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAAGAAGAACATATGAATaGAAGGCAGTAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQARRTYE*KAVAVA
Trigger: AGCAACTGCTACTGCCTTTCATTCATATGTTCTTCT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTCAAAAGTTCCAGACATaGTTCTGTCATACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVQKFQT*FCHTEL
Trigger: TAACTCTGTATGACAGAATCATGTCTGGAACTTTTG...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTTCAAGCACAACGAATaGGGCTTTTCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDFKHNE*GFSGTG
Trigger: CCCTGTGCCAGAAAAGCCTCATTCGTTGTGCTTGAA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCATCTCCCAGGGCATCTaGATCTCGAAACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SCFWKGNLNGLEDEVEIFISQGI*ISKPPG
Trigger: TCCTGGAGGTTTCGAGATTCAGATGCCCTGGGAGAT...GAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAACTCATCTTTCTGGAATaGCCTGCAGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKELIFLE*PAGGQK
Trigger: CTTCTGTCCGCCTGCAGGGCATTCCAGAAAGATGAG...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAGTAGACTATGTGCCTTaGTCAGCCACAATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPVDYVP*SATILA
Trigger: GGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp ACAAGGAGCTCTGTTGGAGACACTGTTTCTTCAGCCTaGACATGTGGCAAAGCCAAGGTACTCCTTGTCATT +
Preference number: 4 (lower is better)
Translates to: TRSSVGDTVSSA*TCGKAKVLLVI
Trigger: AATGACAAGGAGTACCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTTCACATCTGTGATCTaGAGTGCAGCATTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDFTSVI*SAAFPR
Trigger: CCTGGGAAATGCTGCACTTCAGATCACAGATGTGAA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR TCA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAGTTCATGTTCAGAGGTaGCTGGATCCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGVHVQR*LDPQPK
Trigger: TTTTGGTTGTGGATCCAGTCACCTCTGAACATGAAC...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATCCCGTCTTCCTAGGATaGGCAATGGATGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDPVFLG*AMDDLL
Trigger: AAGCAAATCATCCATTGCTCATCCTAGGAAGACGGG...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTATCTCCCAGGGCATCTaGATCTCGAAACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SEVCYLLVWASYLICLLPISQGI*ISKPPG
Trigger: TCCTGGAGGTTTCGAGATTCAGATGCCCTGGGAGAT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAACTGTTTCTTCAGCCTTaGCATGTGGCAAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKELFLQP*HVAKPR
Trigger: CCTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAG...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTTGCTATTTACTGGTTTaGGCAAGTTACTTAATCTGT +
Preference number: 4 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVCYLLV*ASYLIC
Trigger: ACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCA...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAATGGATCCTCAGCCCTaGGAACTTCAAATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPMDPQP*ELQIHS
Trigger: GGAATGAATTTGAAGTTCCCAGGGCTGAGGATCCAT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp TTATACTATGAGCTCCTTGAGGACAGGTACTTTGTCTaGCTCACATCTGTAGATTCAATGCCTGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: LYYELLEDRYFV*LTSVDSMPGTA
Trigger: CGCTGTGCCAGGCATTGAATCTACAGATGTGAGCAAGACAAAGTACCTGTCCTCAAGGAGCTCATAGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
3UTR CAA 72 bp AGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTaGGAGGATGAAGTGGAGATTTTCCAACCATCTCCC +
Preference number: 4 (lower is better)
Translates to: SSSCFWKGNLNG*EDEVEIFQPSP
Trigger: GGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCAACAAATTGAGGCATTaGGTGGAGGCAAAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SCFWKGNLNGLEDEVEIFNKLRH*VEAKGT
Trigger: AGTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTT...GAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGCAGTGGGTGGCAGTCTaGGGTCTGCTATTTACTGGT +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEQWVAV*GLLFTG
Trigger: ACCAGTAAATAGCAGACCTCAGACTGCCACCCACTG...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTTTTTAGGACTAGATTaGCTCAGTGCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDFLGLD*LSAPWR
Trigger: TCTCCAGGGTGCACTGAGTCAATCTAGTCCTAAAAA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGGCAGCGGTACACCCCTaGATCCTGCAATTTCACATC +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEAAVHP*ILQFHI
Trigger: GATGTGAAATTGCAGGATGCAGGGGTGTACCGCTGC...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR GCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAAAGTCCCACATTGCCTaGATCCCACGGGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVKSHIA*IPRAHS
Trigger: GGAATGGGCCCGTGGGATGCAGGCAATGTGGGACTT...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCTCTTGGAATTGGTGGTaGTGGTCTTACCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCFWKGNLNGLEDEVEIFSWNWW*WSYHSG
Trigger: TCCTGAGTGGTAAGACCACCACCACCAATTCCAAGA...GAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTCGAATGAGGCTTTTCTaGCACAGGGTAGCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: SEVCYLLVWASYLICLLPRMRLF*HRVASS
Trigger: ACTGCTAGCTACCCTGTGCCAGAAAAGCCTCATTCG...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAGGGAAAGGAAACTCTaGGATCTCCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNRERKL*DLPGHL
Trigger: CAGATGCCCTGGGAGATCCCAGAGTTTCCTTTCCCT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCACTATGCCATTTACGATaGAACATGAGACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPLCHLR*NMRQKG
Trigger: TCCCTTTTGTCTCATGTTTCATCGTAAATGGCATAG...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAGAGCAATGGATGATTTaGTTGGAGGCTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKEEQWMI*LEAPCS
Trigger: TGAACAAGGAGCCTCCAAGCAAATCATCCATTGCTC...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTGTAGACTATGTGCCTTaGTCAGCCACAATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SEVCYLLVWASYLICLLPVDYVP*SATILA
Trigger: GGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAATGTAGTGATGACAGCTaGTGGCATTCAAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKECSDDS*WHSRVQ
Trigger: TTGAACCCTTGAATGCCACCAGCTGTCATCACTACA...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGGTGTGCTGGTCACATTaGAAAGCTTCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEVCWSH*KASPLS
Trigger: AGAGAGAGGAGAAGCTTTTCAATGTGACCAGCACAC...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCATCCCATGGGATCTTTTaGATTTTGAATCATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPSHGIF*ILNHGK
Trigger: CTTTCCATGATTCAAAATTCAAAAGATCCCATGGGA...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCACAAAAGTTCCAGACATaGTTCTGTCATACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPQKFQT*FCHTEL
Trigger: TAACTCTGTATGACAGAATCATGTCTGGAACTTTTG...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACCTCATCTTTCTGGAATaGCCTGCAGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNLIFLE*PAGGQK
Trigger: CTTCTGTCCGCCTGCAGGGCATTCCAGAAAGATGAG...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTGATCAGAAGTTCCAATaGTGGATTACGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEVCYLLVWASYLICLLPDQKFQ*WITSPP
Trigger: TGGAGGAGACGTAATCCAGCATTGGAACTTCTGATC...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGTCTTGGAATTGGTGGTaGTGGTCTTACCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLESWNWW*WSYHSG
Trigger: TCCTGAGTGGTAAGACCACCACCACCAATTCCAAGA...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAACCAATTCAGCTGTATaGTTTTCCTCAGGATCTAAT +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPTNSAV*FSSGSN
Trigger: ATTAGATCCTGAGGAAAACCATACAGCTGAATTGGT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATCCTATTTCCTCCTCTTaGCAACACTGCTCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNPISSS*QHCSGF
Trigger: AAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGG...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAAGTAGCAGTTGCTTCTaGAAAGGAAACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKESSSCF*KGNLNG
Trigger: GCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAGTGATGACAGCTGGTaGCATTCAAGGGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNSDDSW*HSRVQA
Trigger: TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAACAACCACACTCACATaGCAAGAAGACCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGTTTLT*QEDLTD
Trigger: GTCTGTGAGGTCTTCTTGTCATGTGAGTGTGGTTGT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAATGCAACCAACGGTTTaGTCTTTATGCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKEMQPTV*SLCFQC
Trigger: ACATTGGAAGCATAAAGATCAAACCGTTGGTTGCAT...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGAATGGCTTGGAGGATaGAGTGGAGATTTTCCAACC +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGEWLGG*SGDFPT
Trigger: GGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTC...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGCAGGTTGAGAATCCCTaGTTGAAGATCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEQVENP*LKIRSS
Trigger: GGAACTTCTGATCTTCAAGCAGGGATTCTCAACCTG...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAGGTTCCATTTTCAGTaGTTGGGCCTTTTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNRFHFQ*LGLLSP
Trigger: GGGACTTAAAAGGCCCAAGCACTGAAAATGGAACCT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGACTCTCTTGGAATTGGTaGTGGTGGTCTTACCACTCA +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGLSWNW*WWSYHS
Trigger: TGAGTGGTAAGACCACCACCACCAATTCCAAGAGAG...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACCCTCTCTCTTGGAATTaGTGGTGGTGGTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNPLSWN*WWWSYH
Trigger: GTGGTAAGACCACCACCACCAATTCCAAGAGAGAGG...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCATGCTATTTACTGGTTTaGGCAAGTTACTTAATCTGT +
Preference number: 4 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPCYLLV*ASYLIC
Trigger: ACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCA...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTCCAACCATCTCCCATaGGATCTTTTGAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDSNHLP*DLLNFE
Trigger: TTCAAAATTCAAAAGATCCCATGGGAGATGGTTGGA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGTTGAGAATCCCTGCTTaGAGATCAGAAGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLELRIPA*RSEVPM
Trigger: CATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAA...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAGAATGGCTTGGAGGATaGAGTGGAGATTTTCCAACC +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVEWLGG*SGDFPT
Trigger: GGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTC...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGATCTGGAAAGGAAACTTaGATGGCTTGGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGSGKET*MAWRMK
Trigger: CTTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGA...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGATTTTTAGGACTAGATTaGCTCAGTGCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGFLGLD*LSAPWR
Trigger: TCTCCAGGGTGCACTGAGTCAATCTAGTCCTAAAAA...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGAAAGGCAGTAGCAGTTaGTTCTGGAAAGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEKGSSS*FWKGNL
Trigger: CAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATCAGAAGTTCCAATGCTaGATTACGTCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNQKFQC*ITSPPN
Trigger: ATTTGGAGGAGACGTAATCCAGCATTGGAACTTCTG...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAAGCAGCAAGTTTAGTTTaGCGACAAAATTGTAACATC +
Preference number: 4 (lower is better)
Translates to: VDYVPCSATILACNSHKEAASLV*RQNCNI
Trigger: GATGTTACAATTTTGTCGCCAAACTAAACTTGCTGC...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAGTAGCAGTTGCTTCTaGAAAGGAAACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNSSSCF*KGNLNG
Trigger: GCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGATTGAGAATCCCTGCTTaGAGATCAGAAGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGLRIPA*RSEVPM
Trigger: CATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAA...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACTACACCCCTGCATCCTaGAATTTCACATCTGTGATC +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNYTPAS*NFTSVI
Trigger: GATCACAGATGTGAAATTGCAGGATGCAGGGGTGTA...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR GCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACGATCAGAAGTTCCAATaGTGGATTACGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNDQKFQ*WITSPP
Trigger: TGGAGGAGACGTAATCCAGCATTGGAACTTCTGATC...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACTTCATTCTCCTCCTCTaGTTTCGCCAGGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNFILLL*FRQVPF
Trigger: AAATGGAACCTGGCGAAAGCAGAGGAGGAGAATGAA...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAGAGCAATGGATGATTTaGTTGGAGGCTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVEQWMI*LEAPCS
Trigger: TGAACAAGGAGCCTCCAAGCAAATCATCCATTGCTC...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTATGTAGTGATGACAGCTaGTGGCATTCAAGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVCSDDS*WHSRVQ
Trigger: TTGAACCCTTGAATGCCACCAGCTGTCATCACTACA...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACATGCAGAAAACAAATTaGGGCATTGAGTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNMQKTN*GIEWRQ
Trigger: TTGCCTCCACTCAATGCCTCAATTTGTTTTCTGCAT...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACCATGGGTCTCCTTTTaGGCAAACATAAACAAATCC +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVPWVSF*ANINKS
Trigger: GGATTTGTTTATGTTTGCTCAAAAGGAGACCCATGG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATACCAATTCAGCTGTATaGTTTTCCTCAGGATCTAAT +
Preference number: 4 (lower is better)
Translates to: MPGTAIDIARALNKWFLNTNSAV*FSSGSN
Trigger: ATTAGATCCTGAGGAAAACCATACAGCTGAATTGGT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACCAGAAGTTCCAATGCTaGATTACGTCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNQKFQC*ITSPPN
Trigger: ATTTGGAGGAGACGTAATCCAGCATTGGAACTTCTG...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR TCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTATTCTTAAACGGAAGATaGATGTCAGTGCTACACCAA +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVFLNGR*MSVLHQ
Trigger: TTGGTGTAGCACTGACATTCATCTTCCGTTTAAGAA...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR GCA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAAAAGGTGACATCCTATaGAACCAACGGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVKGDIL*NQRFDL
Trigger: AAGATCAAACCGTTGGTTGCATAGGATGTCACCTTT...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGAAGCTGATATTTAAATaGAACAGATACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: ITVQMHMYKQITQGALLEKLIFK*NRYCTD
Trigger: GTCTGTGCAGTATCTGTTCCATTTAAATATCAGCTT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CCA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAAAGCTGATATTTAAATaGAACAGATACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: TVTPITVQMHMYKQITQGKLIFK*NRYCTD
Trigger: GTCTGTGCAGTATCTGTTCCATTTAAATATCAGCTT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS GCA 90 bp CCTGCAGGCGGACAGAAGCGCGGCTGGTGCGGAGCCTCGGGAAGCTaGGCAGAACTGGGGCCGCGCGGGACGCGCCAGCTGCTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: PAGGQKRGWCGASGS*AELGPRGTRQLLSV
Trigger: AACGCTGAGCAGCTGGCGCGTCCCGCGCGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCCGCCTGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS GCA 90 bp CTCATCTTTCTGGAATGCCCTGCAGGCGGACAGAAGCGCGGCTGGTaGGGAGCCTCGGGAAGCTGCGCAGAACTGGGGCCGCGCGGGACG +
Preference number: 5 (lower is better)
Translates to: LIFLECPAGGQKRGW*GASGSCAELGPRGT
Trigger: CGTCCCGCGCGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCCGCCTGCAGGGCATTCCAGAAAGATGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS CCA 90 bp ATCCTCATCTTTCTGGAATGCCCTGCAGGCGGACAGAAGCGCGGCTaGTGCGGAGCCTCGGGAAGCTGCGCAGAACTGGGGCCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: ILIFLECPAGGQKRG*CGASGSCAELGPRG
Trigger: CCCGCGCGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCCGCCTGCAGGGCATTCCAGAAAGATGAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS GCA 90 bp GCGGTACACCCCTGCATCCTGCAATTTCACATCTGTGATCTGAAGTaGAGCATTTCCCAGGGAGAGCTGGTCCTTCAACAGCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: AVHPCILQFHICDLK*SISQGELVLQQPGP
Trigger: AGGGCCCGGCTGTTGAAGGACCAGCTCTCCCTGGGAAATGCTGCACTTCAGATCACAGATGTGAAATTGCAGGATGCAGGGGTGTACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGGCCCATTCCTTCCTCTaGTCACGCTCAGCCCCGATG +
Preference number: 5 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMAHSFL*SRSAPM
Trigger: CATCGGGGCTGAGCGTGACAAGAGGAAGGAATGGGC...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS TCA 90 bp TGGTGGTCTTACCACTCAGGACTTGATGGTCACTGCTTGTCCAGATaGCTTCGGCCTTGGGGTAGCCCTCAGCCTGACATGTCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: WWSYHSGLDGHCLSR*LRPWGSPQPDMSVH
Trigger: ATGAACTGACATGTCAGGCTGAGGGCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAGACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
CDS-3UTR CAA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCCTTACCACTCAGGACTaGATGGTCACTGCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: WPISSSWQHCSGFPLASSLTTQD*MVTACP
Trigger: TGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAG...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS TCA 90 bp GGATCTAATCTCCACTCAGGACTTGATGGTCACTGCTTGTCCAGATaGCTTCGGCCTTGGGGTAGCCCTCAGCCTGACATGTCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: GSNLHSGLDGHCLSR*LRPWGSPQPDMSVH
Trigger: ATGAACTGACATGTCAGGCTGAGGGCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGAGATTAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498261.1
CDS-3UTR CAA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGTAGACTATGTGCCTaGCTCAGCCACAATTCTTGC +
Preference number: 5 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSSRLCA*LSHNSC
Trigger: GCAAGAATTGTGGCTGAGCAAGGCACATAGTCTACT...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS GCA 90 bp CTTGTAGTCGGCACCACCATAGCTGATCATGCAGCGGTACACCCCTaGATCCTGCAATTTCACATCTGTGATCTGAAGTGCAGCATTTCC +
Preference number: 5 (lower is better)
Translates to: LVVGTTIADHAAVHP*ILQFHICDLKCSIS
Trigger: GGAAATGCTGCACTTCAGATCACAGATGTGAAATTGCAGGATGCAGGGGTGTACCGCTGCATGATCAGCTATGGTGGTGCCGACTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGAGTGAGTCCTTTCATTaGGAGGATGTGCCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMSESFH*EDVPEV
Trigger: TACCTCTGGCACATCCTCCAAATGAAAGGACTCACT...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGACACAAGGAGCTCTGTaGGAGACACTGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMTQGAL*ETLFLQ
Trigger: CTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTGT...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTAGTAGACTATGTGCCTaGCTCAGCCACAATTCTTGC +
Preference number: 5 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVSRLCA*LSHNSC
Trigger: GCAAGAATTGTGGCTGAGCAAGGCACATAGTCTACT...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCGTTGAGAATCCCTGCTaGAAGATCAGAAGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSVENPC*KIRSSN
Trigger: ATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAAC...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTATACTATGAGCTCCTaGAGGACAGGTACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: WPISSSWQHCSGFPLASSYTMSS*RTGTLS
Trigger: AGACAAAGTACCTGTCCTCAAGGAGCTCATAGTATA...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCACTTTTTAGGACTAGATaGACTCAGTGCACCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQALFRTR*TQCTLE
Trigger: CTCCAGGGTGCACTGAGTCAATCTAGTCCTAAAAAG...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TGGCCTATTTCCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCAAGCCAAGGTACTCCTaGTCATTGACACCAGAATAT +
Preference number: 5 (lower is better)
Translates to: WPISSSWQHCSGFPLASSKPRYS*SLTPEY
Trigger: ATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTT...GGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTGCTCAGCCACAATTCTaGCCTGTAATTCACACAAAG +
Preference number: 5 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVAQPQF*PVIHTK
Trigger: CTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGC...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCATTCTTTGGTTGATTTaGTTGTATGGGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSILWLI*LYGAFS
Trigger: GCTGAACGCCCCATACAACAAAATCAACCAAAGAAT...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS TCA 90 bp CTCAGCCCCGATGAACCCCTAAACCACAGGTTGAGAATCCCTGCTTaGAGATCAGAAGTTCCAATGCTGGATTACGTCTCCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: LSPDEPLNHRLRIPA*RSEVPMLDYVSSKC
Trigger: ACATTTGGAGGAGACGTAATCCAGCATTGGAACTTCTGATCTTCAAGCAGGGATTCTCAACCTGTGGTTTAGGGGTTCATCGGGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAACCACATATAGGTCCTaGGGAACCGTGACAGTAAAT +
Preference number: 5 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRTTYRS*GTVTVN
Trigger: ATTTACTGTCACGGTTCCCAAGGACCTATATGTGGT...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CAA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAAGCTTCTCCTCTCTCTaGGAATTGGTGGTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGSFSSL*ELVVVV
Trigger: GACCACCACCACCAATTCCAAGAGAGAGGAGAAGCT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTTTCTGGAAAGGAAACTaGAATGGCTTGGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVFWKGN*NGLEDE
Trigger: TTCATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAA...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCCCATGGGTCTCCTTTaGAGCAAACATAAACAAATC +
Preference number: 5 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMPMGLL*SKHKQI
Trigger: GATTTGTTTATGTTTGCTCAAAAGGAGACCCATGGG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TTGCTTGGAGGCTCCTTGTTCAGAAGTATCCTTTCTCCCTGTCACAGGCGTCGAGCTCAGCCACAATTCTaGCCTGTAATTCACACAAAG +
Preference number: 5 (lower is better)
Translates to: LLGGSLFRSILSPCHRRRAQPQF*PVIHTK
Trigger: CTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGC...TCGACGCCTGTGACAGGGAGAAAGGATACTTCTGAACAAGGAGCCTCCAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CCTCCTCTTGGCAACACTGCTCGGGTTTTCCCCTCGCATCATCCTTATGCTATGCTTTGGTTGATTTTGTaGTATGGGGCATTGACTTTC +
Preference number: 5 (lower is better)
Translates to: PPLGNTARVFPSHHPYAMLWLIL*YGALTF
Trigger: GAAAGTCAATGCCCCATACAACAAAATCAACCAAAG...CATAGCATAAGGATGATGCGAGGGGAAAACCCGAGCAGTGTTGCCAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CAA 90 bp GTCACAGGCGTCGATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCTATCACTTTGCTTCTTaGAGTTTGTATCTTGGATGC +
Preference number: 5 (lower is better)
Translates to: VTGVDEPLRHLKVSRSPSYHFAS*SLYLGC
Trigger: GCATCCAAGATACAAACTCAAAGAAGCAAAGTGATA...GGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATCGACGCCTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GATGAGCCCCTCAGGCATTTGAAAGTATCAAGGTCTCCCTCCAGGCTCCCTGTTTATGCAACCAACGGTTaGATCTTTATGCTTCCAATG +
Preference number: 5 (lower is better)
Translates to: DEPLRHLKVSRSPSRLPVYATNG*IFMLPM
Trigger: CATTGGAAGCATAAAGATCAAACCGTTGGTTGCATA...AACAGGGAGCCTGGAGGGAGACCTTGATACTTTCAAATGCCTGAGGGGCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATGCCTATTTCCTCCTCTaGGCAACACTGCTCGGGTTT +
Preference number: 5 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDAYFLL*ATLLGF
Trigger: AAACCCGAGCAGTGTTGCCAAGAGGAGGAAATAGGC...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAACCGTCCCAGACCACATaGGCCTATTTCCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: VDYVPCSATILACNSHKEPSQTT*AYFLLL
Trigger: CAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGG...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS TCA 90 bp AGTGCTACACCAAGGCATAATAAGATGGCTCCCAGAATTACCAAGTaGGTCCTTTCATTTGGAGGATGTGCCAGAGGTAGTTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: SATPRHNKMAPRITK*VLSFGGCARGSSGM
Trigger: CATCCCAGAACTACCTCTGGCACATCCTCCAAATGAAAGGACTCACTTGGTAATTCTGGGAGCCATCTTATTATGCCTTGGTGTAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000492923.1
CDS TCA 90 bp TCATCTTCACCCAGTGATCCCACTCAGCTTCAATATAATTGCTGTTaGACAGTGGAATGCCTTTGCACCACCTTGCAGAGGTTAAGTCGG +
Preference number: 5 (lower is better)
Translates to: SSSPSDPTQLQYNCC*TVECLCTTLQRLSR
Trigger: CCGACTTAACCTCTGCAAGGTGGTGCAAAGGCATTCCACTGTTCAACAGCAATTATATTGAAGCTGAGTGGGATCACTGGGTGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492923.1
CDS-3UTR CAA 90 bp TTGACATGTGGCAAAGCCAAGGTACTCCTTGTCATTGACACCAGAATATGGCCAAGTGTGCTGGTCACATaGAAAAGCTTCTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LTCGKAKVLLVIDTRIWPSVLVT*KSFSSL
Trigger: GAGAGAGGAGAAGCTTTTCAATGTGACCAGCACACT...TGGCCATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTTTGCCACATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGAAAACAAATTGAGGCATaGAGTGGAGGCAAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGKQIEA*SGGKGH
Trigger: GTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTT...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCAATACTGCACAGACACTaGAGGTCTGAGAATAAGATT +
Preference number: 5 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAILHRH*RSENKI
Trigger: AATCTTATTCTCAGACCTCAAGTGTCTGTGCAGTAT...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp CTCTTAGGAGGGCTGTGTAGTGATGACAGCTGGTGGCATTCAAGGGTTCAAGCACATTCAATTGTCATATaGCTACCATACTCTACCACA +
Preference number: 5 (lower is better)
Translates to: LLGGLCSDDSWWHSRVQAHSIVI*LPYSTT
Trigger: TGTGGTAGAGTATGGTAGCAATATGACAATTGAATG...TGCTTGAACCCTTGAATGCCACCAGCTGTCATCACTACACAGCCCTCCTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CAA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACGCCCATTCCTTCCTCTaGTCACGCTCAGCCCCGATG +
Preference number: 5 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNAHSFL*SRSAPM
Trigger: CATCGGGGCTGAGCGTGACAAGAGGAAGGAATGGGC...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGATTCCATTTTCAGTGCTaGGGCCTTTTAAGTCCCACA +
Preference number: 5 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGFHFQC*GLLSPT
Trigger: TGTGGGACTTAAAAGGCCCAAGCACTGAAAATGGAA...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATAAACAAATTGAGGCATaGAGTGGAGGCAAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDKQIEA*SGGKGH
Trigger: GTGCCCTTTGCCTCCACTCAATGCCTCAATTTGTTT...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATCTTTTTAGGACTAGATaGACTCAGTGCACCCTGGAG +
Preference number: 5 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDLFRTR*TQCTLE
Trigger: CTCCAGGGTGCACTGAGTCAATCTAGTCCTAAAAAG...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATAGCTTCTCCTCTCTCTaGGAATTGGTGGTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: MPGTAIDIARALNKWFLNSFSSL*ELVVVV
Trigger: GACCACCACCACCAATTCCAAGAGAGAGGAGAAGCT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACTTTTAAGTCCCACATaGCCTGCATCCCACGGGCCC +
Preference number: 5 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVLLSPT*PASHGP
Trigger: GGGCCCGTGGGATGCAGGCAATGTGGGACTTAAAAG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTTGTTGTATGGGGCATaGACTTTCACAGTAATTCGC +
Preference number: 5 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDLLYGA*TFTVIR
Trigger: GCGAATTACTGTGAAAGTCAATGCCCCATACAACAA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTAGTGTGCTGGTCACATaGAAAAGCTTCTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SEVCYLLVWASYLICLLPSVLVT*KSFSSL
Trigger: GAGAGAGGAGAAGCTTTTCAATGTGACCAGCACACT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGAAAGGCAGTAGCAGTTGCTTCTGGAAAGGAAACTTGAATGGCTTGGAGGATTCATTAGTTGTTGTGTaGATTCTCAGTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: MKGSSSCFWKGNLNGLEDSLVVV*ILSVLV
Trigger: GACCAGCACACTGAGAATCAACACAACAACTAATGA...ATCCTCCAAGCCATTCAAGTTTCCTTTCCAGAAGCAACTGCTACTGCCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTAGTGAGTCCTTTCATTaGGAGGATGTGCCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: SEVCYLLVWASYLICLLPSESFH*EDVPEV
Trigger: TACCTCTGGCACATCCTCCAAATGAAAGGACTCACT...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAACAATGGATGATTTGCTaGGAGGCTCCTTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: VDYVPCSATILACNSHKEQWMIC*EAPCSE
Trigger: TTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTG...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AACTTGAATGGCTTGGAGGATGAAGTGGAGATTTTCCAACCATCTCCCATGGGATATGCAACCAACGGTTaGATCTTTATGCTTCCAATG +
Preference number: 5 (lower is better)
Translates to: NLNGLEDEVEIFQPSPMGYATNG*IFMLPM
Trigger: CATTGGAAGCATAAAGATCAAACCGTTGGTTGCATA...TCCCATGGGAGATGGTTGGAAAATCTCCACTTCATCCTCCAAGCCATTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AAAGAACACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACCCGTCCCAGACCACATaGGCCTATTTCCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: KEHCHTNYCTNAHVQTDNPSQTT*AYFLLL
Trigger: CAAGAGGAGGAAATAGGCCAATGTGGTCTGGGACGG...GTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp GTAGACTATGTGCCTTGCTCAGCCACAATTCTTGCCTGTAATTCACACAAAGAATCATTAGTTGTTGTGTaGATTCTCAGTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VDYVPCSATILACNSHKESLVVV*ILSVLV
Trigger: GACCAGCACACTGAGAATCAACACAACAACTAATGA...TTCTTTGTGTGAATTACAGGCAAGAATTGTGGCTGAGCAAGGCACATAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAGCTCTGTTGGAGACTGTTTCTTCAGCCTaGACATGTGGCAAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: ITVQMHMYKQITQGALLETVSSA*TCGKAK
Trigger: CTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGT...CTCCAACAGAGCTCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATACTGTTTCTTCAGCCTaGACATGTGGCAAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: MPGTAIDIARALNKWFLNTVSSA*TCGKAK
Trigger: CTTGGCTTTGCCACATGTCAAGGCTGAAGAAACAGT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACTTACCACTCAGGACTaGATGGTCACTGCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVLTTQD*MVTACP
Trigger: TGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAACACAAGGAGCTCTGTaGGAGACACTGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TVTPITVQMHMYKQITQGTQGAL*ETLFLQ
Trigger: CTGAAGAAACAGTGTCTCCAACAGAGCTCCTTGTGT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTCTTTGGTTGATTTTGTaGTATGGGGCGTTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SEVCYLLVWASYLICLLPLWLIL*YGAFSK
Trigger: TTTGCTGAACGCCCCATACAACAAAATCAACCAAAG...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS TCA 90 bp AGACCACTGCAATTAAGGAAATACTACCTTTTCTTAAACGGAAGATaGATGTCAGTGCTACACCAAGGCATAATAAGATGGCTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RPLQLRKYYLFLNGR*MSVLHQGIIRWLPE
Trigger: TTCTGGGAGCCATCTTATTATGCCTTGGTGTAGCACTGACATTCATCTTCCGTTTAAGAAAAGGTAGTATTTCCTTAATTGCAGTGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492923.1
CDS-3UTR CAA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATTATACTATGAGCTCCTaGAGGACAGGTACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: MPGTAIDIARALNKWFLNYTMSS*RTGTLS
Trigger: AGACAAAGTACCTGTCCTCAAGGAGCTCATAGTATA...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTTATCACTTTGCTTCTTaGAGTTTGTATCTTGGATGC +
Preference number: 5 (lower is better)
Translates to: SEVCYLLVWASYLICLLPYHFAS*SLYLGC
Trigger: GCATCCAAGATACAAACTCAAAGAAGCAAAGTGATA...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACAATGGATGATTTGCTaGGAGGCTCCTTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVQWMIC*EAPCSE
Trigger: TTCTGAACAAGGAGCCTCCAAGCAAATCATCCATTG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp ATGCCTGGCACAGCGATTGATATTGCAAGGGCACTTAATAAATGGTTTTTGAATATACTGCACAGACACTaGAGGTCTGAGAATAAGATT +
Preference number: 5 (lower is better)
Translates to: MPGTAIDIARALNKWFLNILHRH*RSENKI
Trigger: AATCTTATTCTCAGACCTCAAGTGTCTGTGCAGTAT...ATTCAAAAACCATTTATTAAGTGCCCTTGCAATATCAATCGCTGTGCCAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp TCTGAGGTCTGCTATTTACTGGTTTGGGCAAGTTACTTAATCTGTTTGCTTCCTCTCCCATGGGATCTTTaGAATTTTGAATCATGGAAA +
Preference number: 5 (lower is better)
Translates to: SEVCYLLVWASYLICLLPLPWDL*NFESWK
Trigger: TTTCCATGATTCAAAATTCAAAAGATCCCATGGGAG...AGGAAGCAAACAGATTAAGTAACTTGCCCAAACCAGTAAATAGCAGACCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTACCCATGGGTCTCCTTTaGAGCAAACATAAACAAATC +
Preference number: 5 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVPMGLL*SKHKQI
Trigger: GATTTGTTTATGTTTGCTCAAAAGGAGACCCATGGG...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS-3UTR CAA 90 bp AGGAATTCCAGTGTTATTTTTCAGGGTTATTTTAAGTACCGACCTCTCTTTGTAAAGCCAAGGTACTCCTaGTCATTGACACCAGAATAT +
Preference number: 5 (lower is better)
Translates to: RNSSVIFQGYFKYRPLFVKPRYS*SLTPEY
Trigger: ATATTCTGGTGTCAATGACAAGGAGTACCTTGGCTT...TACAAAGAGAGGTCGGTACTTAAAATAACCCTGAAAAATAACACTGGAATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS GCA 90 bp AGACAATTAGTGCAGCCAGGTCTAATTGTTTTTCTACTGGGAATTTaGATTCAATTGTCATATTGCTACCATACTCTACCACATATAGGT +
Preference number: 5 (lower is better)
Translates to: RQLVQPGLIVFLLGI*IQLSYCYHTLPHIG
Trigger: ACCTATATGTGGTAGAGTATGGTAGCAATATGACAATTGAATGCAAATTCCCAGTAGAAAAACAATTAGACCTGGCTGCACTAATTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS-3UTR CAA 90 bp ACTGTCACACCAATTACTGTACAAATGCACATGTACAAACAGATAACACAAGGAATTCTTTGGTTGATTTaGTTGTATGGGGCATTGACT +
Preference number: 5 (lower is better)
Translates to: TVTPITVQMHMYKQITQGILWLI*LYGALT
Trigger: AGTCAATGCCCCATACAACAAAATCAACCAAAGAAT...TCCTTGTGTTATCTGTTTGTACATGTGCATTTGTACAGTAATTGGTGTGACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381577.4
CDS CCA 72 bp GCGGCTGGTGCGGAGCCTCGGGAAGCTGCGCAGAACTaGGGCCGCGCGGGACGCGCCAGCTGCTCAGCGTTG +
Preference number: 6 (lower is better)
Translates to: AAGAEPREAAQN*GRAGRASCSAL
Trigger: CAACGCTGAGCAGCTGGCGCGTCCCGCGCGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCCGCACCAGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS GCA 72 bp CTGGAATGCCCTGCAGGCGGACAGAAGCGCGGCTGGTaGGGAGCCTCGGGAAGCTGCGCAGAACTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: LECPAGGQKRGW*GASGSCAELGP
Trigger: CGGCCCCAGTTCTGCGCAGCTTCCCGAGGCTCCGCACCAGCCGCGCTTCTGTCCGCCTGCAGGGCATTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381573.8
CDS TCA 72 bp CTCCACTCAGGACTTGATGGTCACTGCTTGTCCAGATaGCTTCGGCCTTGGGGTAGCCCTCAGCCTGACATG +
Preference number: 6 (lower is better)
Translates to: LHSGLDGHCLSR*LRPWGSPQPDM
Trigger: CATGTCAGGCTGAGGGCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498261.1
CDS TCA 72 bp TACCACTCAGGACTTGATGGTCACTGCTTGTCCAGATaGCTTCGGCCTTGGGGTAGCCCTCAGCCTGACATG +
Preference number: 6 (lower is better)
Translates to: YHSGLDGHCLSR*LRPWGSPQPDM
Trigger: CATGTCAGGCTGAGGGCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
CDS CAA 90 bp CTCCTCTCTCTTGGAATTGGTGGTGGTGGTCTTACCACTCAGGACTaGATGGTCACTGCTTGTCCAGATGACTTCGGCCTTGGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: LLSLGIGGGGLTTQD*MVTACPDDFGLGVA
Trigger: GGCTACCCCAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAGACCACCACCACCAATTCCAAGAGAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
CDS TCA 72 bp ACCTTGCAGAGGTTAAGTCGGGTTTCCTTGCAGCCATaGTCCAATTCTCACCCCTTCCTCACCCCCAGTGGA +
Preference number: 6 (lower is better)
Translates to: TLQRLSRVSLQP*SNSHPFLTPSG
Trigger: TCCACTGGGGGTGAGGAAGGGGTGAGAATTGGATCATGGCTGCAAGGAAACCCGACTTAACCTCTGCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492923.1
CDS GCA 72 bp GGCACCACCATAGCTGATCATGCAGCGGTACACCCCTaGATCCTGCAATTTCACATCTGTGATCTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: GTTIADHAAVHP*ILQFHICDLKC
Trigger: GCACTTCAGATCACAGATGTGAAATTGCAGGATGCAGGGGTGTACCGCTGCATGATCAGCTATGGTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS TCA 72 bp TTGGAATTGGTGGTGGTGGTCTTACCACTCAGGACTTaGTGGTCACTGCTTGTCCAGATGACTTCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LELVVVVLPLRT*WSLLVQMTSAL
Trigger: CAAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAGACCACCACCACCAATTCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
CDS GCA 72 bp CCCTGCATCCTGCAATTTCACATCTGTGATCTGAAGTaGAGCATTTCCCAGGGAGAGCTGGTCCTTCAACAG +
Preference number: 6 (lower is better)
Translates to: PCILQFHICDLK*SISQGELVLQQ
Trigger: CTGTTGAAGGACCAGCTCTCCCTGGGAAATGCTGCACTTCAGATCACAGATGTGAAATTGCAGGATGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS CAA 72 bp CTTGGAATTGGTGGTGGTGGTCTTACCACTCAGGACTaGATGGTCACTGCTTGTCCAGATGACTTCGGCCTT +
Preference number: 6 (lower is better)
Translates to: LGIGGGGLTTQD*MVTACPDDFGL
Trigger: AAGGCCGAAGTCATCTGGACAAGCAGTGACCATCAAGTCCTGAGTGGTAAGACCACCACCACCAATTCCAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
CDS TCA 72 bp CCCAGTGATCCCACTCAGCTTCAATATAATTGCTGTTaGACAGTGGAATGCCTTTGCACCACCTTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: PSDPTQLQYNCC*TVECLCTTLQR
Trigger: CCTCTGCAAGGTGGTGCAAAGGCATTCCACTGTTCAACAGCAATTATATTGAAGCTGAGTGGGATCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492923.1
CDS CAA 72 bp AGTGTGCTGGTCACATTGAAAAGCTTCTCCTCTCTCTaGGAATTGGTGGTGGTGGTCTTACCACTCAGGACT +
Preference number: 6 (lower is better)
Translates to: SVLVTLKSFSSL*ELVVVVLPLRT
Trigger: AGTCCTGAGTGGTAAGACCACCACCACCAATTCCAAGAGAGAGGAGAAGCTTTTCAATGTGACCAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
ENST00000492923.1
CDS CCA 72 bp GCCAGAGGTAGTTCTGGGATGACCAATTCAGCTGTATaGTTTTCCTCAGGATCTAATCTCCACTCAGGACTT +
Preference number: 6 (lower is better)
Translates to: ARGSSGMTNSAV*FSSGSNLHSGL
Trigger: AAGTCCTGAGTGGAGATTAGATCCTGAGGAAAACCATACAGCTGAATTGGTCATCCCAGAACTACCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498261.1
CDS TCA 72 bp CCAAGGCATAATAAGATGGCTCCCAGAATTACCAAGTaGGTCCTTTCATTTGGAGGATGTGCCAGAGGTAGT +
Preference number: 6 (lower is better)
Translates to: PRHNKMAPRITK*VLSFGGCARGS
Trigger: ACTACCTCTGGCACATCCTCCAAATGAAAGGACTCACTTGGTAATTCTGGGAGCCATCTTATTATGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000492923.1
CDS CCA 72 bp GCCAGAGGTAGTTCTGGGATGACCAATTCAGCTGTATaGTTTTCCTCAGGATCTAATCTCCTAAAAGTGCAG +
Preference number: 6 (lower is better)
Translates to: ARGSSGMTNSAV*FSSGSNLLKVQ
Trigger: CTGCACTTTTAGGAGATTAGATCCTGAGGAAAACCATACAGCTGAATTGGTCATCCCAGAACTACCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000492923.1
CDS CAA 72 bp GTCATATTGCTACCATACTCTACCACATATAGGTCCTaGGGAACCGTGACAGTAAATGCGTTCAGCAAATGC +
Preference number: 6 (lower is better)
Translates to: VILLPYSTTYRS*GTVTVNAFSKC
Trigger: GCATTTGCTGAACGCATTTACTGTCACGGTTCCCAAGGACCTATATGTGGTAGAGTATGGTAGCAATATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS CCA 72 bp CTCAGCCTGACATGTCAGTTCATGTTCAGAGGTGACTaGATCCACAACCAAAATTCTTTGGTTGATTTTGTT +
Preference number: 6 (lower is better)
Translates to: LSLTCQFMFRGD*IHNQNSLVDFV
Trigger: AACAAAATCAACCAAAGAATTTTGGTTGTGGATCCAGTCACCTCTGAACATGAACTGACATGTCAGGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381573.8
ENST00000381577.4
ENST00000474218.1
ENST00000498261.1
CDS TCA 72 bp TCACATCCATCATTCTCCCTTTTCTTAAACGGAAGATaGATGTCAGTGCTACACCAAGGCATAATAAGATGG +
Preference number: 6 (lower is better)
Translates to: SHPSFSLFLNGR*MSVLHQGIIRW
Trigger: CCATCTTATTATGCCTTGGTGTAGCACTGACATTCATCTTCCGTTTAAGAAAAGGGAGAATGATGGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381573.8
ENST00000381577.4
CDS CCA 72 bp TTCAGAATATTACCTGGGATGACCAATTCAGCTGTATaGTTTTCCTCAGGATCTAATCTCCTAAAAGTGCAG +
Preference number: 6 (lower is better)
Translates to: FRILPGMTNSAV*FSSGSNLLKVQ
Trigger: CTGCACTTTTAGGAGATTAGATCCTGAGGAAAACCATACAGCTGAATTGGTCATCCCAGGTAATATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474218.1
CDS GCA 72 bp GTGCAGCCAGGTCTAATTGTTTTTCTACTGGGAATTTaGATTCAATTGTCATATTGCTACCATACTCTACCA +
Preference number: 6 (lower is better)
Translates to: VQPGLIVFLLGI*IQLSYCYHTLP
Trigger: TGGTAGAGTATGGTAGCAATATGACAATTGAATGCAAATTCCCAGTAGAAAAACAATTAGACCTGGCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381577.4
ENST00000498261.1
CDS TCA 72 bp CAATTAAGGAAATACTACCTTTTCTTAAACGGAAGATaGATGTCAGTGCTACACCAAGGCATAATAAGATGG +
Preference number: 6 (lower is better)
Translates to: QLRKYYLFLNGR*MSVLHQGIIRW
Trigger: CCATCTTATTATGCCTTGGTGTAGCACTGACATTCATCTTCCGTTTAAGAAAAGGTAGTATTTCCTTAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492923.1