RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD248 (Homo sapiens)

Ensembl gene IDs: ENSG00000174807

Ensembl transcript IDs: ENST00000311330.4

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTaGGAGCCAAGTCTAGTGGTTGAGAGAGGACCCTGGCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: WCILGHERWARKQSS*EPSLVVERGPWLGL
Trigger: CAGGCCCAGCCAGGGTCCTCTCTCAACCACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
3UTR-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCCCCCATGGGTCCCTaGTGCAGCCCCGGCCATGTG +
Preference number: 2 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRAPMGP*CSPGHV
Trigger: CACATGGCCGGGGCTGCACCAGGGACCCATGGGGGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
3UTR-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACCCATGGGTCCCTGGTaGAGCCCCGGCCATGTGTCC +
Preference number: 2 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRPMGPW*SPGHVS
Trigger: GGACACATGGCCGGGGCTGCACCAGGGACCCATGGG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
3UTR-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAAGCCATCTGTCCAGCTaGGCAGCCCCCATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: PEVLRALVYPWSRALGQESHLSS*AAPMGP
Trigger: GGGACCCATGGGGGCTGCCCAGCTGGACAGATGGCT...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
3UTR-3UTR TCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCCAAGTCTAGTGGTTaGGAGAGGACCCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRAKSSG*ERTLAG
Trigger: CCCAGCCAGGGTCCTCTCTCAACCACTAGACTTGGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCCCAGTGTGGGCCCTaGGGCCGCCCAGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAQCGP*GRPGQQ
Trigger: TTGCTGGCCTGGGCGGCCGCAGGGCCCACACTGGGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGAGCGTAGCAGCTGCTaGGGCCGCAGGCGGCACGGG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVERSSC*GRRRHG
Trigger: CCCGTGCCGCCTGCGGCCCCAGCAGCTGCTACGCTC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGCCCCTGTGGTCCACGTaGAGCCGCGCAGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLPLWST*SRAVGA
Trigger: AGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGG...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAATGGCCCGCCTCATCTTaGAGCGCCGGGCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEWPASS*SAGQAP
Trigger: GGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCA...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAAGGGCCACACAGCGCTaGGCCGGGCAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRRATQR*AGQGPP
Trigger: TGGAGGCCCCTGCCCGGCCCAGCGCTGTGTGGCCCT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCACGGCTGGGCCGGCCTaGCCCGCCTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVTAGPA*PASSCS
Trigger: GCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGT...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGCGTGGTATACACGGCTaGGCCGGCCTGGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLRGIHG*AGLARL
Trigger: GAGGCGGGCCAGGCCGGCCCAGCCGTGTATACCACG...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGCCCCCATGGGTCCCTaGTGCAGCCCCGGCCATGTG +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLAPMGP*CSPGHV
Trigger: CACATGGCCGGGGCTGCACCAGGGACCCATGGGGGC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCAGAGAGCGTAGCAGCTaGTGGGGCCGCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVRERSS*WGRRRH
Trigger: GTGCCGCCTGCGGCCCCAGCAGCTGCTACGCTCTCT...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGATGCCGGGCCTGCCGCTaGAGCCCGATCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRCRACR*SPIHSS
Trigger: GCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCA...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCGGTGCTCGCCACTTaGCTCCAGGGCCACACAGCG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAVLAT*LQGHTA
Trigger: CGCTGTGTGGCCCTGGAGGCAAGTGGCGAGCACCGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCGTCGACAGCCAGCGTaGACGAGCCCTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSRRQPA*TSPPAS
Trigger: GCTGGCTGGAGGGCTCGTGCACGCTGGCTGTCGACG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCTGCCAGCCTGGCACTaGACAGCGGCCACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSLPAWH*TAATEP
Trigger: CGGCTCTGTGGCCGCTGTGCAGTGCCAGGCTGGCAG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGCAACTGCGCCCGTCTaGTGCCAGCCGGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLATAPV*CQPEAL
Trigger: GAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGCACCCATGGCCCCTaGAGGGCTGCAGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGTHGP*RAAADA
Trigger: GGCATCAGCTGCAGCCCTGCAGGGGCCATGGGTGCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGGCTGTCCACACGCTaGGCCTCCTCGGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLRLSTR*ASSGVR
Trigger: TCGGACCCCCGAGGAGGCCCAGCGTGTGGACAGCCT...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCGGGGGTGGCCAGGTaGGCTCCGGGTAGGGTATCT +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAGVAR*APGRVS
Trigger: AGATACCCTACCCGGAGCCCACCTGGCCACCCCCGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGGCACTGAGCGGGGGTaGCCAGGTGGGCTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRGTERG*PGGLRV
Trigger: TACCCGGAGCCCACCTGGCCACCCCCGCTCAGTGCC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCCGTCCAGCCACCGTTaGAGGCCTTCCAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVPSSHR*RPSRPR
Trigger: ACGAGGCCTGGAAGGCCTTCAACGGTGGCTGGACGG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCCACCACAGGCCGGGTaGCGGAGAGCACTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVPPQAG*RRALRS
Trigger: ACTCCTCAGTGCTCTCCGTCACCCGGCCTGTGGTGG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAATGGCATTGCCGGGCCTaGCGCTGCAGCCCGATCCAC +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEWHCRA*RCSPIH
Trigger: GTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCA...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAACCCTCCAGCCAGCGGTaGTCGCCACTTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEPSSQR*SPLASR
Trigger: CCTGGAGGCAAGTGGCGAGCACCGCTGGCTGGAGGG...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCAGAGAGGCTCCCCTaGCAGCCTGGCACTGCACAG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAERLP*QPGTAQ
Trigger: CTGTGCAGTGCCAGGCTGGCAGGGGAGCCTCTCTGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCCCCGTTGTCAGGGCTaGAGCCAGTCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVPRCQG*SQSPGT
Trigger: TGTGCCTGGGGACTGGCTGCAGCCCTGACAACGGGG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCACTGCGCCCGTCTGCTaGCAGCCGGAAGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVTAPVC*QPEALS
Trigger: ACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGT...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAACCGGGCTCACACTGCTaGTCGCACGGAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEPGSHC*SHGAWA
Trigger: TGCCCAGGCTCCGTGCGAGCAGCAGTGTGAGCCCGG...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACCACCGGGCTCACACTaGTGCTCGCACGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRPPGSH*CSHGAW
Trigger: CCAGGCTCCGTGCGAGCAGCAGTGTGAGCCCGGTGG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAACCCATGGGTCCCTGGTaGAGCCCCGGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEPMGPW*SPGHVS
Trigger: GGACACATGGCCGGGGCTGCACCAGGGACCCATGGG...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCGTGAAGCCGCGCAGTaGGCGCTGCAGCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSREAAQ*ALQLAL
Trigger: CAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGGGCCTCCAGAGGCTaGCTGGGCCCAGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGASRG*LGPVGE
Trigger: TTCACCAACTGGGCCCAGCCAGCCTCTGGAGGCCCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGCCAGGTGGAAGGGCGTaGTATACACGGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLPGGRA*YTRLGR
Trigger: CCGGCCCAGCCGTGTATACCACGCCCTTCCACCTGG...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCGCTTGTTGGGTGCATaGGGGCCACAGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVRLLGA*GPQRVQ
Trigger: CTGCACCCGCTGTGGCCCCCATGCACCCAACAAGCG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCTGGGCCCAGTTGGTaGAAGCCGTGTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEAGPSW*KPCPGP
Trigger: GGGACCAGGACACGGCTTTCACCAACTGGGCCCAGC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGTGACGGAGAGCACTaGGGAGTGGTAGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGDGEH*GVVGDP
Trigger: AGGGTCCCCTACCACTCCTCAGTGCTCTCCGTCACC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAAGGCCTCCAGGAAGGTaGGGCGCCGTGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRRPPGR*GAVGRE
Trigger: CTCTCTTCCCACGGCGCCGCACCTTCCTGGAGGCCT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGTGTCCACACAGCGGTaGGGATCATCCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSVSTQR*GSSSAG
Trigger: GCCAGCGGAGGATGATCCGCACCGCTGTGTGGACAC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGAGTGGTGGTCTGGGTaGCAGCGACCCGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEEWWSG*QRPGCL
Trigger: CAGACACCCGGGTCGCTGGCACCCAGACCACCACTC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGGGGGCCACAGCGGGTaGAGTACACGATGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRGGHSG*STRCPV
Trigger: CACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGATGCGCTTGTTGGGTaGATGGGGGCCACAGCGGGT +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVDALVG*MGATAG
Trigger: ACCCGCTGTGGCCCCCATGCACCCAACAAGCGCATC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGAAGGTGCGGCGCCGTaGGAAGAGAGCGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLEGAAP*EESVAA
Trigger: AGCTGCTACGCTCTCTTCCCACGGCGCCGCACCTTC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCCTCCAGAGGCTGGCTaGGCCCAGTTGGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSPPEAG*AQLVKA
Trigger: GGCTTTCACCAACTGGGCCCAGCCAGCCTCTGGAGG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCAGCTGTAGCCTTGTaGCCCACCGGGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAAVAL*PTGLTL
Trigger: CAGTGTGAGCCCGGTGGGCCACAAGGCTACAGCTGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCGGATCATCCTCCGCTaGCCGGAAACCCAGGCGACA +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVRIILR*PETQAT
Trigger: TGTCGCCTGGGTTTCCGGCCAGCGGAGGATGATCCG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCAGTGTGGGATGCGTaGCAGAGACCACCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAVWDA*QRPPQA
Trigger: GGCCTGTGGTGGTCTCTGCCACGCATCCCACACTGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGGCTGCGGGCTGGGTaGCAGCAGGCACAGAGATTT +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGLRAG*QQAQRF
Trigger: AAATCTCTGTGCCTGCTGCCACCCAGCCCGCAGCCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGCCACAGGGCCAACTTaGGACTGGGGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVATGPT*DWGHLP
Trigger: GGGAAGATGGCCCCAGTCCCAAGTTGGCCCTGTGGC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACAGCGGCAGGACACGTaGCCATCCACCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRQRQDT*PSTSST
Trigger: TGTGGAGGAGGTGGATGGTCACGTGTCCTGCCGCTG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGCCAAGTCTAGTGGTTaGGAGAGGACCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVAKSSG*ERTLAG
Trigger: CCCAGCCAGGGTCCTCTCTCAACCACTAGACTTGGC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACCAGCACCCGCCCCCTaGGGTCTTAAGGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRPAPAP*GLKGFG
Trigger: ACCAAAGCCCTTAAGACCTCAGGGGGCGGGTGCTGG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGCAAAGTCAGGCGGCTaGGTAGGCTCCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSAKSGG*VGSIHR
Trigger: CCTGTGGATGGAGCCTACGCAGCCGCCTGACTTTGC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGTCATCCCTCTGGCTGTaGTCGGCAAGACCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLSSLWL*SARPAS
Trigger: GGAGGCTGGTCTTGCCGAGCACAGCCAGAGGGATGA...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTCATCTCCGAGGTCCTaGGAAGCCTGGGCACCCATG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVSSPRS*EAWAPM
Trigger: CATGGGTGCCCAGGCTTCCCAGGACCTCGGAGATGA...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGGCAGAAGGCAGTGTaGGATGCGTGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGQKAV*DAWQRP
Trigger: TGGTCTCTGCCACGCATCCCACACTGCCTTCTGCCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGGAAACATGGGGGACTaGTGGGCAGGGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLGNMGD*WAGKSS
Trigger: GGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCAGGCAAATGAGTGGTaGTCTGGGTGCCAGCGACCC +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVQANEW*SGCQRP
Trigger: GGGTCGCTGGCACCCAGACCACCACTCATTTGCCTG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGCACCGGTCATCCCTCTaGCTGTGCTCGGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLHRSSL*LCSARP
Trigger: TGGTCTTGCCGAGCACAGCCAGAGGGATGACCGGTG...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCACCCCATCACACGCTaGTTCTGCAGGTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVHPITR*FCRSAP
Trigger: GGGTGCAGACCTGCAGAACCAGCGTGTGATGGGGTG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCTTGGTCACGAGCGCTaGGCCAGGAAGCAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSLGHER*ARKQSS
Trigger: GGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGCAGGCACAGAGATTTaGTGGGCAGGAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVAGTEI*WAGDTG
Trigger: CCCTGTGTCTCCTGCCCATCAAATCTCTGTGCCTGC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTGCTCCCAGCATGGATaGCCCAGCGATAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVCSQHG*PSDSSQ
Trigger: CTGACTGCTATCGCTGGGTCATCCATGCTGGGAGCA...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTACACCTCCCTCAGGCTaGTTCACGCAGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSTPPSG*FTQSRE
Trigger: CTCTCTGCTCTGCGTGAAGCAGCCTGAGGGAGGTGT...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGGGTGCAGTACACGATaGCCAGTGCAAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVGCSTR*PVQAGP
Trigger: TGGTCCTGCTTGCACTGGGCATCGTGTACTGCACCC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGTGAAAGCCGTGTCCTaGTCCCCTGTGGTCCACGTG +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEVKAVS*SPVVHV
Trigger: CACGTGGACCACAGGGGACCAGGACACGGCTTTCAC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTATCACGGGGATCTGGTaGTCACGGGACAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSITGIW*SRDKAG
Trigger: CCCAGCTTTGTCCCGTGACCACCAGATCCCCGTGAT...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGAGATCATAGGGGGCTaGTGGGCAGGAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSREIIGG*WAGGCA
Trigger: AGCACAGCCTCCTGCCCACCAGCCCCCTATGATCTC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAAACATGGGGGACTGGTaGGCAGGGAAGAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQENMGDW*AGKSSG
Trigger: TCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTT...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAAGCGACCCGGGTGTCTaGAAACATGGGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRSDPGV*KHGGLV
Trigger: CACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGGAAGCTGGGTGGCCTaGGTTCTGAGGACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRGSWVA*VLRTRA
Trigger: TGCCCTTGTCCTCAGAACCCAGGCCACCCAGCTTCC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGGGATAATGGGAAGCTaGGTGGCCTGGGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLGIMGS*VAWVLR
Trigger: CCTCAGAACCCAGGCCACCCAGCTTCCCATTATCCC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGGGCCAACTTGGGACTaGGGCCATCTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEGPTWD*GHLPLG
Trigger: TCCCAAGGGAAGATGGCCCCAGTCCCAAGTTGGCCC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGGCATGGGTTCTGTTaGGCTCTTGCTCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGHGFC*ALAPSM
Trigger: CATGCTGGGAGCAAGAGCCCAACAGAACCCATGCCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGGGATTCCAGGCAAATaGGTGGTGGTCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQEGIPGK*VVVWVP
Trigger: TGGCACCCAGACCACCACTCATTTGCCTGGAATCCC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGATGTAGGGCTGATGGGTaGGGTCTGGTTAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRCRADG*GLVSGA
Trigger: AGCCCCACTAACCAGACCTCACCCATCAGCCCTACA...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGAAGGCAGTGTGGGATaGGTGGCAGAGACCACCACA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSREGSVG*VAETTT
Trigger: TGTGGTGGTCTCTGCCACGCATCCCACACTGCCTTC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTCTGTGGAGACCAGGTaGAAGGGCGTGGTATACACG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVSVETR*KGVVYT
Trigger: CGTGTATACCACGCCCTTCCACCTGGTCTCCACAGA...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCCACTCAAACTCTGTaGAGACCAGGTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRATQTL*RPGGRA
Trigger: CGCCCTTCCACCTGGTCTCCACAGAGTTTGAGTGGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTCACGGGACAAAGCTaGGTGTGTGGCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRVTGQS*VCGRDH
Trigger: GTGATCCCTGCCACACACCCAGCTTTGTCCCGTGAC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCGATCACGGGGATCTaGTGGTCACGGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRAITGI*WSRDKA
Trigger: AGCTTTGTCCCGTGACCACCAGATCCCCGTGATCGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAATCATAGGGGGCTGGTaGGCAGGAGGCTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRIIGGW*AGGCAE
Trigger: TTCAGCACAGCCTCCTGCCCACCAGCCCCCTATGAT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTTCCAGGCAAATGAGTaGTGGTCTGGGTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVFQANE*WSGCQR
Trigger: TCGCTGGCACCCAGACCACCACTCATTTGCCTGGAA...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCTTTGGTGTATCCTTaGTCACGAGCGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRALVYP*SRALGQ
Trigger: CTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCTCCGGATATTTGGTTaGGATCATAGGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVLRIFG*DHRGLV
Trigger: CACCAGCCCCCTATGATCTCAACCAAATATCCGGAG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTATCTGGATAGTTGGCTaGGATCACGGGGATCTGGTG +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSIWIVG*DHGDLV
Trigger: CACCAGATCCCCGTGATCGCAGCCAACTATCCAGAT...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGATGGCTCTCTGTCCTCTaGGAAGCTCGGTCTATAGGC +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRWLSVL*EARSIG
Trigger: GCCTATAGACCGAGCTTCCCAGAGGACAGAGAGCCA...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAACGGGTAGGGTATCTGTaGCTCTCTGTCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQERVGYL*LSVLWE
Trigger: TTCCCAGAGGACAGAGAGCCACAGATACCCTACCCG...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGGCAGAAGGCAGATCTaGATAGTTGGCTGCGATCAC +
Preference number: 4 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSGRRQI*IVGCDH
Trigger: GTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAAGAGGGCTGGGCAGTTaGGATAATGGGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRRGLGS*DNGKLG
Trigger: ACCCAGCTTCCCATTATCCCAACTGCCCAGCCCTCT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTGGTCAGAGAGGGCTaGGCAGTTGGGATAATGGGA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRVVREG*AVGIMG
Trigger: TCCCATTATCCCAACTGCCCAGCCCTCTCTGACCAC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGCAAAAAGACACACGTTaGCACCAGGAGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RALVYPWSRALGQEAEFLQKDTR*HQECHQ
Trigger: CTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTG...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAAGCGATAGCAGTCAGTaGTGCGCTTGTTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQESDSSQ*CACWVH
Trigger: ATGCACCCAACAAGCGCATCACTGACTGCTATCGCT...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACACACACCGGCAATCTaGCACTCATCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRHTPAI*HSSVST
Trigger: TGTGGACACAGATGAGTGCCAGATTGCCGGTGTGTG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAATTGACACACATCTGCTaGCACACACCGGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQELTHIC*HTPAIW
Trigger: CCAGATTGCCGGTGTGTGCCAGCAGATGTGTGTCAA...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGCAGATCTGGATAGTTaGCTGCGATCACGGGGATCT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRADLDS*LRSRGS
Trigger: AGATCCCCGTGATCGCAGCCAACTATCCAGATCTGC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR TCA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAAGGAAGCAGAGTTCCTaGGAGCCAAGTCTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: PEVLRALVYPWSRALGQERKQSS*EPSLVV
Trigger: AACCACTAGACTTGGCTCTCAGGAACTCTGCTTCCT...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR GCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTACACGATGCCCAGTaGAAGCAGGACCACCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRVHDAQ*KQDHQK
Trigger: TTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTAC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CCA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAAGGGGCATGGTTAGGTaGGATTCCAGGCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRRGMVR*DSRQMS
Trigger: ACTCATTTGCCTGGAATCCCACCTAACCATGCCCCT...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp CAGCTCGCGGCAGGCCCGCCAGGCCTCCAGGAAGGTGCGGCGCCGTaGGAAGAGAGCGTAGCAGCTGCTGGGGCCGCAGGCGGCACGGGG +
Preference number: 5 (lower is better)
Translates to: QLAAGPPGLQEGAAP*EESVAAAGAAGGTG
Trigger: CCCCGTGCCGCCTGCGGCCCCAGCAGCTGCTACGCTCTCTTCCCACGGCGCCGCACCTTCCTGGAGGCCTGGCGGGCCTGCCGCGAGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp AAGCCGCGCAGTGGGCGCTGCAGCTGGCATTGCCGGGCCTGCCGCTaGAGCCCGATCCACAGCAGCCGGCTGGCTGGGCCCGCACCCACC +
Preference number: 5 (lower is better)
Translates to: KPRSGRCSWHCRACR*SPIHSSRLAGPAPT
Trigger: GGTGGGTGCGGGCCCAGCCAGCCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp CACGTGAAGCCGCGCAGTGGGCGCTGCAGCTGGCATTGCCGGGCCTaGCGCTGCAGCCCGATCCACAGCAGCCGGCTGGCTGGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: HVKPRSGRCSWHCRA*RCSPIHSSRLAGPA
Trigger: TGCGGGCCCAGCCAGCCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp CCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTGCAGCTGGCATTaGCGGGCCTGCCGCTGCAGCCCGATCCACAGCAGCCGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PVVHVKPRSGRCSWH*RACRCSPIHSSRLA
Trigger: AGCCAGCCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp TGGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTGCAGCTaGCATTGCCGGGCCTGCCGCTGCAGCCCGATCCACAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: WSPVVHVKPRSGRCS*HCRACRCSPIHSSR
Trigger: CCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GTGTCCTGGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTaGAGCTGGCATTGCCGGGCCTGCCGCTGCAGCCCGATCCACAGC +
Preference number: 5 (lower is better)
Translates to: VSWSPVVHVKPRSGR*SWHCRACRCSPIHS
Trigger: GCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGACCAGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp CTCGCACGGAGCCTGGGCACAGGGGTCCTCGCAACTGCGCCCGTCTaGTGCCAGCCGGAAGCCCTCAGTGCAGCGGCAGGACACGTGACC +
Preference number: 5 (lower is better)
Translates to: LARSLGTGVLATAPV*CQPEALSAAAGHVT
Trigger: GGTCACGTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGCGAGGACCCCTGTGCCCAGGCTCCGTGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GTGGAGACCAGGTGGAAGGGCGTGGTATACACGGCTGGGCCGGCCTaGCCCGCCTCATCTTGCAGCGCCGGGCAGGCGCCCTCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VETRWKGVVYTAGPA*PASSCSAGQAPSKP
Trigger: TGGCTTCGAGGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATACCACGCCCTTCCACCTGGTCTCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GCACGGAGCCTGGGCACAGGGGTCCTCGCAACTGCGCCCGTCTGCTaGCAGCCGGAAGCCCTCAGTGCAGCGGCAGGACACGTGACCATC +
Preference number: 5 (lower is better)
Translates to: ARSLGTGVLATAPVC*QPEALSAAAGHVTI
Trigger: GATGGTCACGTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGCGAGGACCCCTGTGCCCAGGCTCCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GAAAGCCGTGTCCTGGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTaGGCGCTGCAGCTGGCATTGCCGGGCCTGCCGCTGCAGCCCGAT +
Preference number: 5 (lower is better)
Translates to: ESRVLVPCGPREAAQ*ALQLALPGLPLQPD
Trigger: ATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGACCAGGACACGGCTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GGGCCTCCAGAGGCTGGCTGGGCCCAGTTGGTGAAAGCCGTGTCCTaGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GPPEAGWAQLVKAVS*SPVVHVKPRSGRCS
Trigger: GCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGACCAGGACACGGCTTTCACCAACTGGGCCCAGCCAGCCTCTGGAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp CGCCCTCGAAGCCAAACTGGCACAGGTAGCCGTCGACAGCCAGCGTaGACGAGCCCTCCAGCCAGCGGTGCTCGCCACTTGCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RPRSQTGTGSRRQPA*TSPPASGARHLPPG
Trigger: CCCTGGAGGCAAGTGGCGAGCACCGCTGGCTGGAGGGCTCGTGCACGCTGGCTGTCGACGGCTACCTGTGCCAGTTTGGCTTCGAGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GGCACCAGGAGTGCCACCAGCAGCCACCGGTCATCCCTCTGGCTGTaGTCGGCAAGACCAGCCTCCCCCAGGGCTGTTGGGGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GTRSATSSHRSSLWL*SARPASPRAVGAAV
Trigger: CACAGCAGCCCCAACAGCCCTGGGGGAGGCTGGTCTTGCCGAGCACAGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp CTCCGCTGGCCGGAAACCCAGGCGACAGTGGCAGCTGTAGCCTTGTaGCCCACCGGGCTCACACTGCTGCTCGCACGGAGCCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: LRWPETQATVAAVAL*PTGLTLLLARSLGT
Trigger: TGTGCCCAGGCTCCGTGCGAGCAGCAGTGTGAGCCCGGTGGGCCACAAGGCTACAGCTGCCACTGTCGCCTGGGTTTCCGGCCAGCGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp CACGTTGGCACCAGGAGTGCCACCAGCAGCCACCGGTCATCCCTCTaGCTGTGCTCGGCAAGACCAGCCTCCCCCAGGGCTGTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: HVGTRSATSSHRSSL*LCSARPASPRAVGA
Trigger: AGCCCCAACAGCCCTGGGGGAGGCTGGTCTTGCCGAGCACAGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTCTGGCCCGCCTCATCTaGCAGCGCCGGGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSLARLI*QRRAGA
Trigger: GGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAG...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 90 bp CCGTCTGCTGCCAGCCGGAAGCCCTCAGTGCAGCGGCAGGACACGTaGCCATCCACCTCCTCCACACATTCGTGTTCGCAGCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PSAASRKPSVQRQDT*PSTSSTHSCSQPPL
Trigger: CAACGGGGGCTGCGAACACGAATGTGTGGAGGAGGTGGATGGTCACGTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GGTCCTCGCAACTGCGCCCGTCTGCTGCCAGCCGGAAGCCCTCAGTaGAGCGGCAGGACACGTGACCATCCACCTCCTCCACACATTCGT +
Preference number: 5 (lower is better)
Translates to: GPRNCARLLPAGSPQ*SGRTRDHPPPPHIR
Trigger: ACGAATGTGTGGAGGAGGTGGATGGTCACGTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGCGAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp CTGGCACTCATCTGTGTCCACACAGCGGTGCGGATCATCCTCCGCTaGCCGGAAACCCAGGCGACAGTGGCAGCTGTAGCCTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LALICVHTAVRIILR*PETQATVAAVALWP
Trigger: GGGCCACAAGGCTACAGCTGCCACTGTCGCCTGGGTTTCCGGCCAGCGGAGGATGATCCGCACCGCTGTGTGGACACAGATGAGTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GGCACTGAGCGGGGGTGGCCAGGTGGGCTCCGGGTAGGGTATCTGTaGCTCTCTGTCCTCTGGGAAGCTCGGTCTATAGGCCAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: GTERGWPGGLRVGYL*LSVLWEARSIGQGK
Trigger: TTTGCCCTGGCCTATAGACCGAGCTTCCCAGAGGACAGAGAGCCACAGATACCCTACCCGGAGCCCACCTGGCCACCCCCGCTCAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCGCTGCAGCTGGCATaGCCGGGCCTGCCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PEVLRALVYPWSRALGQEALQLA*PGLPLQ
Trigger: CTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGC...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp TGGCACACACCGGCAATCTGGCACTCATCTGTGTCCACACAGCGGTaGGGATCATCCTCCGCTGGCCGGAAACCCAGGCGACAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: WHTPAIWHSSVSTQR*GSSSAGRKPRRQWQ
Trigger: CTGCCACTGTCGCCTGGGTTTCCGGCCAGCGGAGGATGATCCGCACCGCTGTGTGGACACAGATGAGTGCCAGATTGCCGGTGTGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp TGGCCAGGTGGGCTCCGGGTAGGGTATCTGTGGCTCTCTGTCCTCTaGGAAGCTCGGTCTATAGGCCAGGGCAAAGTCAGGCGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: WPGGLRVGYLWLSVL*EARSIGQGKVRRLR
Trigger: ACGCAGCCGCCTGACTTTGCCCTGGCCTATAGACCGAGCTTCCCAGAGGACAGAGAGCCACAGATACCCTACCCGGAGCCCACCTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp TGGTCACGGGACAAAGCTGGGTGTGTGGCAGGGATCACAGGAGGCTaGTGGGCAGAAGGCAGTGTGGGATGCGTGGCAGAGACCACCACA +
Preference number: 5 (lower is better)
Translates to: WSRDKAGCVAGITGG*WAEGSVGCVAETTT
Trigger: TGTGGTGGTCTCTGCCACGCATCCCACACTGCCTTCTGCCCACCAGCCTCCTGTGATCCCTGCCACACACCCAGCTTTGTCCCGTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCGCTGGCTGGGCCCAGTaGGTGAAAGCCGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVAGWAQ*VKAVSW
Trigger: CCAGGACACGGCTTTCACCAACTGGGCCCAGCCAGC...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTGAGGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAAGCGGTGCTCGCCACTaGCCTCCAGGGCCACACAGC +
Preference number: 5 (lower is better)
Translates to: PEVLRALVYPWSRALGQESGARH*PPGPHS
Trigger: GCTGTGTGGCCCTGGAGGCAAGTGGCGAGCACCGCT...TTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGTGGCAGCTGTAGCCTaGTGGCCCACCGGGCTCACA +
Preference number: 5 (lower is better)
Translates to: RALVYPWSRALGQEAEFLVAAVA*WPTGLT
Trigger: TGTGAGCCCGGTGGGCCACAAGGCTACAGCTGCCAC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTTCCGTCCAGCCACCGTaGAAGGCCTTCCAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSSVQPP*KAFQAS
Trigger: CGAGGCCTGGAAGGCCTTCAACGGTGGCTGGACGGA...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp CAGTGCAAGCAGGACCACCAAAAAGACACACGTTGGCACCAGGAGTaGCACCAGCAGCCACCGGTCATCCCTCTGGCTGTGCTCGGCAAG +
Preference number: 5 (lower is better)
Translates to: QCKQDHQKDTRWHQE*HQQPPVIPLAVLGK
Trigger: CTTGCCGAGCACAGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GTTGGGTGCATGGGGGCCACAGCGGGTGCAGTACACGATGCCCAGTaGAAGCAGGACCACCAAAAAGACACACGTTGGCACCAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: VGCMGATAGAVHDAQ*KQDHQKDTRWHQEC
Trigger: GCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCCATGCACCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GTCTGGGTGCCAGCGACCCGGGTGTCTGGAAACATGGGGGACTGGTaGGCAGGGAAGAGCTCCGGATATTTGGTTGAGATCATAGGGGGC +
Preference number: 5 (lower is better)
Translates to: VWVPATRVSGNMGDW*AGKSSGYLVEIIGG
Trigger: GCCCCCTATGATCTCAACCAAATATCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCTGGCACCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGATGTTCGCAGCCCCCGTaGTCAGGGCTGCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRCSQPP*SGLQPV
Trigger: GACTGGCTGCAGCCCTGACAACGGGGGCTGCGAACA...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 90 bp AGGGTGGTGACCAGAGGGGCATGGTTAGGTGGGATTCCAGGCAAATaGGTGGTGGTCTGGGTGCCAGCGACCCGGGTGTCTGGAAACATG +
Preference number: 5 (lower is better)
Translates to: RVVTRGAWLGGIPGK*VVVWVPATRVSGNM
Trigger: CATGTTTCCAGACACCCGGGTCGCTGGCACCCAGACCACCACTCATTTGCCTGGAATCCCACCTAACCATGCCCCTCTGGTCACCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp TGCGCTTGTTGGGTGCATGGGGGCCACAGCGGGTGCAGTACACGATaGCCAGTGCAAGCAGGACCACCAAAAAGACACACGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: CACWVHGGHSGCSTR*PVQAGPPKRHTLAP
Trigger: TGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCCATGCACCCAACAAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp AGCATGGATGACCCAGCGATAGCAGTCAGTGATGCGCTTGTTGGGTaGATGGGGGCCACAGCGGGTGCAGTACACGATGCCCAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SMDDPAIAVSDALVG*MGATAGAVHDAQCK
Trigger: CTTGCACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCCATGCACCCAACAAGCGCATCACTGACTGCTATCGCTGGGTCATCCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GTGGTCTGGGTGCCAGCGACCCGGGTGTCTGGAAACATGGGGGACTaGTGGGCAGGGAAGAGCTCCGGATATTTGGTTGAGATCATAGGG +
Preference number: 5 (lower is better)
Translates to: VVWVPATRVSGNMGD*WAGKSSGYLVEIIG
Trigger: CCCTATGATCTCAACCAAATATCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCTGGCACCCAGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp TCCAGGCAAATGAGTGGTGGTCTGGGTGCCAGCGACCCGGGTGTCTaGAAACATGGGGGACTGGTGGGCAGGGAAGAGCTCCGGATATTT +
Preference number: 5 (lower is better)
Translates to: SRQMSGGLGASDPGV*KHGGLVGREELRIF
Trigger: AAATATCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCTGGCACCCAGACCACCACTCATTTGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp GTACACGATGCCCAGTGCAAGCAGGACCACCAAAAAGACACACGTTaGCACCAGGAGTGCCACCAGCAGCCACCGGTCATCCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VHDAQCKQDHQKDTR*HQECHQQPPVIPLA
Trigger: AGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTTCAGTGATGCGCTTGTaGGGTGCATGGGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSSVMRL*GAWGPQ
Trigger: CTGTGGCCCCCATGCACCCAACAAGCGCATCACTGA...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCCAGTCAGTGATGCGCTaGTTGGGTGCATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVQSVMR*LGAWGP
Trigger: TGGCCCCCATGCACCCAACAAGCGCATCACTGACTG...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGGGTTCTGTTGGGCTCTaGCTCCCAGCATGGATGACC +
Preference number: 5 (lower is better)
Translates to: RALVYPWSRALGQEAEFLGSVGL*LPAWMT
Trigger: GGTCATCCATGCTGGGAGCAAGAGCCCAACAGAACC...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGGGGCATGGGTTCTGTaGGGCTCTTGCTCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRGAWVL*GSCSQH
Trigger: ATGCTGGGAGCAAGAGCCCAACAGAACCCATGCCCC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGGCTTTGGTGTATCCTaGGTCACGAGCGCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRGFGVS*VTSAGP
Trigger: TGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCC...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 90 bp GAGAATACCGGGTTGGTAGGCAGAAGGCAGATCTGGATAGTTGGCTaGGATCACGGGGATCTGGTGGTCACGGGACAAAGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: ENTGLVGRRQIWIVG*DHGDLVVTGQSWVC
Trigger: ACACACCCAGCTTTGTCCCGTGACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCCGGTATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp CAGAGAGAATACCGGGTTGGTAGGCAGAAGGCAGATCTGGATAGTTaGCTGCGATCACGGGGATCTGGTGGTCACGGGACAAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QREYRVGRQKADLDS*LRSRGSGGHGTKLG
Trigger: ACCCAGCTTTGTCCCGTGACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCCGGTATTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGAGAATACCGGGTaGGTAGGCAGAAGGCAGATC +
Preference number: 5 (lower is better)
Translates to: RALVYPWSRALGQEAEFLRENTG*VGRRQI
Trigger: GATCTGCCTTCTGCCTACCAACCCGGTATTCTCTCT...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GGTCTTAAGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGACCAAAAAGACACACGTaGGCACCAGGAGTGCCACCA +
Preference number: 5 (lower is better)
Translates to: GLKGFGVSLVTSAGPGSRPKRHT*APGVPP
Trigger: TGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGG...TCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCTTAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp GTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTTGACACCCCATTTATaGGAGAAGACCCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: VSLVTSAGPGSRVPESQVLTPHL*EKTPAP
Trigger: GGGTGCTGGGGTCTTCTCCAATAAATGGGGTGTCAA...GACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp AGGGCTTTGGTGTATCCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAAGAGCTCCGGATATTaGGTTGAGATCATAGGGGGC +
Preference number: 5 (lower is better)
Translates to: RALVYPWSRALGQEAEFLKSSGY*VEIIGG
Trigger: GCCCCCTATGATCTCAACCAAATATCCGGAGCTCTT...CAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGGATACACCAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS-3UTR CAA 90 bp CCTTGGTCACGAGCGCTGGGCCAGGAAGCAGAGTTCCTGAGAGCCAAGTCTAGTGAGGTCTTAAGGGCTTaGGTGTATCCTTGGTCACGA +
Preference number: 5 (lower is better)
Translates to: PWSRALGQEAEFLRAKSSEVLRA*VYPWSR
Trigger: TCGTGACCAAGGATACACCAAAGCCCTTAAGACCTC...ACTAGACTTGGCTCTCAGGAACTCTGCTTCCTGGCCCAGCGCTCGTGACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 90 bp ATGAGAGACAGAGAGAATACCGGGTTGGTAGGCAGAAGGCAGATCTaGATAGTTGGCTGCGATCACGGGGATCTGGTGGTCACGGGACAA +
Preference number: 5 (lower is better)
Translates to: MRDRENTGLVGRRQI*IVGCDHGDLVVTGQ
Trigger: TTGTCCCGTGACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCCGGTATTCTCTCTGTCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 90 bp GCTCATGTCCCTCGCTACAATAACACTCGAAGCCACCAACGTAGTTaGCACACATCTGCTGGCACACACCGGCAATCTGGCACTCATCTG +
Preference number: 5 (lower is better)
Translates to: AHVPRYNNTRSHQRS*HTSAGTHRQSGTHL
Trigger: CAGATGAGTGCCAGATTGCCGGTGTGTGCCAGCAGATGTGTGTCAACTACGTTGGTGGCTTCGAGTGTTATTGTAGCGAGGGACATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp GGAAGGTGCGGCGCCGTGGGAAGAGAGCGTAGCAGCTaGTGGGGCCGCAGGCGGCACGGGGCTCAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GRCGAVGRERSS*WGRRRHGAQQP
Trigger: GGGCTGCTGAGCCCCGTGCCGCCTGCGGCCCCAGCAGCTGCTACGCTCTCTTCCCACGGCGCCGCACCTTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CCGCGCAGTGGGCGCTGCAGCTGGCATTGCCGGGCCTaGCGCTGCAGCCCGATCCACAGCAGCCGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: PRSGRCSWHCRA*RCSPIHSSRLA
Trigger: AGCCAGCCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GCAGGCCCGCCAGGCCTCCAGGAAGGTGCGGCGCCGTaGGAAGAGAGCGTAGCAGCTGCTGGGGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: AGPPGLQEGAAP*EESVAAAGAAG
Trigger: GCCTGCGGCCCCAGCAGCTGCTACGCTCTCTTCCCACGGCGCCGCACCTTCCTGGAGGCCTGGCGGGCCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp CTGGCTGGGCCCGCACCCACCAGGCTGTCCACACGCTaGGCCTCCTCGGGGGTCCGAGGAGTGGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LAGPAPTRLSTR*ASSGVRGVARS
Trigger: CGACCTGGCCACTCCTCGGACCCCCGAGGAGGCCCAGCGTGTGGACAGCCTGGTGGGTGCGGGCCCAGCCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CCAGCTCGCGGCAGGCCCGCCAGGCCTCCAGGAAGGTaGGGCGCCGTGGGAAGAGAGCGTAGCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PARGRPARPPGR*GAVGRERSSCW
Trigger: CCAGCAGCTGCTACGCTCTCTTCCCACGGCGCCGCACCTTCCTGGAGGCCTGGCGGGCCTGCCGCGAGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp TCCCCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTaGAGCTGGCATTGCCGGGCCTGCCGCTGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: SPVVHVKPRSGR*SWHCRACRCSP
Trigger: CGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp AGGTGGAAGGGCGTGGTATACACGGCTGGGCCGGCCTaGCCCGCCTCATCTTGCAGCGCCGGGCAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: RWKGVVYTAGPA*PASSCSAGQAP
Trigger: GGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATACCACGCCCTTCCACCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 90 bp CCCTGTGGTCCACGTGAAGCCGCGCAGTGGGCGCTGCAGCTGGCATaGCCGGGCCTGCCGCTGCAGCCCGATCCACAGCAGCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: PCGPREAAQWALQLA*PGLPLQPDPQQPAG
Trigger: GCCAGCCGGCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CACGTGAAGCCGCGCAGTGGGCGCTGCAGCTGGCATTaGCGGGCCTGCCGCTGCAGCCCGATCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: HVKPRSGRCSWH*RACRCSPIHSS
Trigger: GCTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GTGGTCCACGTGAAGCCGCGCAGTGGGCGCTGCAGCTaGCATTGCCGGGCCTGCCGCTGCAGCCCGATCCAC +
Preference number: 6 (lower is better)
Translates to: VVHVKPRSGRCS*HCRACRCSPIH
Trigger: GTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GTCCTGGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTaGGCGCTGCAGCTGGCATTGCCGGGCCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: VLVPCGPREAAQ*ALQLALPGLPL
Trigger: CAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGGACCACAGGGGACCAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GGCCCACCGGGCTCACACTGCTGCTCGCACGGAGCCTaGGCACAGGGGTCCTCGCAACTGCGCCCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: GPPGSHCCSHGA*AQGSSQLRPSA
Trigger: AGCAGACGGGCGCAGTTGCGAGGACCCCTGTGCCCAGGCTCCGTGCGAGCAGCAGTGTGAGCCCGGTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 72 bp CCACGTGAAGCCGCGCAGTGGGCGCTGCAGCTGGCATaGCCGGGCCTGCCGCTGCAGCCCGATCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: PREAAQWALQLA*PGLPLQPDPQQ
Trigger: CTGCTGTGGATCGGGCTGCAGCGGCAGGCCCGGCAATGCCAGCTGCAGCGCCCACTGCGCGGCTTCACGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp TCGACAGCCAGCGTGCACGAGCCCTCCAGCCAGCGGTaGTCGCCACTTGCCTCCAGGGCCACACAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: STASVHEPSSQR*SPLASRATQRW
Trigger: CCAGCGCTGTGTGGCCCTGGAGGCAAGTGGCGAGCACCGCTGGCTGGAGGGCTCGTGCACGCTGGCTGTCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp GTATACACGGCTGGGCCGGCCTGGCCCGCCTCATCTTaGAGCGCCGGGCAGGCGCCCTCGAAGCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: VYTAGPAWPASS*SAGQAPSKPNW
Trigger: CCAGTTTGGCTTCGAGGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CTGGGCACAGGGGTCCTCGCAACTGCGCCCGTCTGCTaGCAGCCGGAAGCCCTCAGTGCAGCGGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: LGTGVLATAPVC*QPEALSAAAGH
Trigger: GTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGCGAGGACCCCTGTGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp AGCCTGGGCACAGGGGTCCTCGCAACTGCGCCCGTCTaGTGCCAGCCGGAAGCCCTCAGTGCAGCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SLGTGVLATAPV*CQPEALSAAAG
Trigger: TCCTGCCGCTGCACTGAGGGCTTCCGGCTGGCAGCAGACGGGCGCAGTTGCGAGGACCCCTGTGCCCAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 72 bp GGTATACACGGCTGGGCCGGCCTGGCCCGCCTCATCTaGCAGCGCCGGGCAGGCGCCCTCGAAGCCAAACTG +
Preference number: 6 (lower is better)
Translates to: GIHGWAGLARLI*QRRAGALEAKL
Trigger: CAGTTTGGCTTCGAGGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 90 bp GAAGGGCGTGGTATACACGGCTGGGCCGGCCTGGCCCGCCTCATCTaGCAGCGCCGGGCAGGCGCCCTCGAAGCCAAACTGGCACAGGTA +
Preference number: 6 (lower is better)
Translates to: EGRGIHGWAGLARLI*QRRAGALEAKLAQV
Trigger: TACCTGTGCCAGTTTGGCTTCGAGGGCGCCTGCCCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATACCACGCCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 90 bp ATCCTCCGCTGGCCGGAAACCCAGGCGACAGTGGCAGCTGTAGCCTaGTGGCCCACCGGGCTCACACTGCTGCTCGCACGGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ILRWPETQATVAAVA*WPTGLTLLLARSLG
Trigger: GCCCAGGCTCCGTGCGAGCAGCAGTGTGAGCCCGGTGGGCCACAAGGCTACAGCTGCCACTGTCGCCTGGGTTTCCGGCCAGCGGAGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp TGTGGAGACCAGGTGGAAGGGCGTGGTATACACGGCTaGGCCGGCCTGGCCCGCCTCATCTTGCAGCGCCGG +
Preference number: 6 (lower is better)
Translates to: CGDQVEGRGIHG*AGLARLILQRR
Trigger: CCGGCGCTGCAAGATGAGGCGGGCCAGGCCGGCCCAGCCGTGTATACCACGCCCTTCCACCTGGTCTCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CCTCAGGCTGCTTCACGCAGAGCAGAGAGGCTCCCCTaGCAGCCTGGCACTGCACAGCGGCCACAGAGCCGA +
Preference number: 6 (lower is better)
Translates to: PQAASRRAERLP*QPGTAQRPQSR
Trigger: TCGGCTCTGTGGCCGCTGTGCAGTGCCAGGCTGGCAGGGGAGCCTCTCTGCTCTGCGTGAAGCAGCCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp AGTGCCACCAGCAGCCACCGGTCATCCCTCTGGCTGTaGTCGGCAAGACCAGCCTCCCCCAGGGCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: SATSSHRSSLWL*SARPASPRAVG
Trigger: CCCAACAGCCCTGGGGGAGGCTGGTCTTGCCGAGCACAGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GAGGCTGGCTGGGCCCAGTTGGTGAAAGCCGTGTCCTaGTCCCCTGTGGTCCACGTGAAGCCGCGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: EAGWAQLVKAVS*SPVVHVKPRSG
Trigger: CCCACTGCGCGGCTTCACGTGGACCACAGGGGACCAGGACACGGCTTTCACCAACTGGGCCCAGCCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp CCGGAAACCCAGGCGACAGTGGCAGCTGTAGCCTTGTaGCCCACCGGGCTCACACTGCTGCTCGCACGGAGC +
Preference number: 6 (lower is better)
Translates to: PETQATVAAVAL*PTGLTLLLARS
Trigger: GCTCCGTGCGAGCAGCAGTGTGAGCCCGGTGGGCCACAAGGCTACAGCTGCCACTGTCGCCTGGGTTTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp ACCAGGAGTGCCACCAGCAGCCACCGGTCATCCCTCTaGCTGTGCTCGGCAAGACCAGCCTCCCCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TRSATSSHRSSL*LCSARPASPRA
Trigger: AGCCCTGGGGGAGGCTGGTCTTGCCGAGCACAGCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 72 bp GTGTGGGATGCGTGGCAGAGACCACCACAGGCCGGGTaGCGGAGAGCACTGAGGAGTGGTAGGGGACCCTGG +
Preference number: 6 (lower is better)
Translates to: VWDAWQRPPQAG*RRALRSGRGPW
Trigger: CCAGGGTCCCCTACCACTCCTCAGTGCTCTCCGTCACCCGGCCTGTGGTGGTCTCTGCCACGCATCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp AGCCAAACTGGCACAGGTAGCCGTCGACAGCCAGCGTaGACGAGCCCTCCAGCCAGCGGTGCTCGCCACTTG +
Preference number: 6 (lower is better)
Translates to: SQTGTGSRRQPA*TSPPASGARHL
Trigger: CAAGTGGCGAGCACCGCTGGCTGGAGGGCTCGTGCACGCTGGCTGTCGACGGCTACCTGTGCCAGTTTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp CGGGGGTGGCCAGGTGGGCTCCGGGTAGGGTATCTGTaGCTCTCTGTCCTCTGGGAAGCTCGGTCTATAGGC +
Preference number: 6 (lower is better)
Translates to: RGWPGGLRVGYL*LSVLWEARSIG
Trigger: GCCTATAGACCGAGCTTCCCAGAGGACAGAGAGCCACAGATACCCTACCCGGAGCCCACCTGGCCACCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 72 bp GCCAGCCGGAAGCCCTCAGTGCAGCGGCAGGACACGTaGCCATCCACCTCCTCCACACATTCGTGTTCGCAG +
Preference number: 6 (lower is better)
Translates to: ASRKPSVQRQDT*PSTSSTHSCSQ
Trigger: CTGCGAACACGAATGTGTGGAGGAGGTGGATGGTCACGTGTCCTGCCGCTGCACTGAGGGCTTCCGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp CCGGCAATCTGGCACTCATCTGTGTCCACACAGCGGTaGGGATCATCCTCCGCTGGCCGGAAACCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: PAIWHSSVSTQR*GSSSAGRKPRR
Trigger: TCGCCTGGGTTTCCGGCCAGCGGAGGATGATCCGCACCGCTGTGTGGACACAGATGAGTGCCAGATTGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp ATCTGTGTCCACACAGCGGTGCGGATCATCCTCCGCTaGCCGGAAACCCAGGCGACAGTGGCAGCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: ICVHTAVRIILR*PETQATVAAVA
Trigger: GGCTACAGCTGCCACTGTCGCCTGGGTTTCCGGCCAGCGGAGGATGATCCGCACCGCTGTGTGGACACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp CGGCCACAGAGCCGAAGGGCAGCCACTCAAACTCTGTaGAGACCAGGTGGAAGGGCGTGGTATACACGGCTG +
Preference number: 6 (lower is better)
Translates to: RPQSRRAATQTL*RPGGRAWYTRL
Trigger: CAGCCGTGTATACCACGCCCTTCCACCTGGTCTCCACAGAGTTTGAGTGGCTGCCCTTCGGCTCTGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 90 bp GTAGGCTCCATCCACAGGATCCCAGGCATCTCCGTCCAGCCACCGTaGAAGGCCTTCCAGGCCTCGTCTTCATCTTCCTCATCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: VGSIHRIPGISVQPP*KAFQASSSSSSSSP
Trigger: CGGGGAGGATGAGGAAGATGAAGACGAGGCCTGGAAGGCCTTCAACGGTGGCTGGACGGAGATGCCTGGGATCCTGTGGATGGAGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 72 bp ACCAGAGGGGCATGGTTAGGTGGGATTCCAGGCAAATaGGTGGTGGTCTGGGTGCCAGCGACCCGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: TRGAWLGGIPGK*VVVWVPATRVS
Trigger: AGACACCCGGGTCGCTGGCACCCAGACCACCACTCATTTGCCTGGAATCCCACCTAACCATGCCCCTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp TGGGTGCATGGGGGCCACAGCGGGTGCAGTACACGATaGCCAGTGCAAGCAGGACCACCAAAAAGACACACG +
Preference number: 6 (lower is better)
Translates to: WVHGGHSGCSTR*PVQAGPPKRHT
Trigger: CGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCCATGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GTGCCAGCGACCCGGGTGTCTGGAAACATGGGGGACTaGTGGGCAGGGAAGAGCTCCGGATATTTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: VPATRVSGNMGD*WAGKSSGYLVE
Trigger: CTCAACCAAATATCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp GCCCAGTGCAAGCAGGACCACCAAAAAGACACACGTTaGCACCAGGAGTGCCACCAGCAGCCACCGGTCATC +
Preference number: 6 (lower is better)
Translates to: AQCKQDHQKDTR*HQECHQQPPVI
Trigger: GATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 90 bp AGTACACGATGCCCAGTGCAAGCAGGACCACCAAAAAGACACACGTaGGCACCAGGAGTGCCACCAGCAGCCACCGGTCATCCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: STRCPVQAGPPKRHT*APGVPPAATGHPSG
Trigger: GCCAGAGGGATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp ATGGGGGCCACAGCGGGTGCAGTACACGATGCCCAGTaGAAGCAGGACCACCAAAAAGACACACGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: MGATAGAVHDAQ*KQDHQKDTRWH
Trigger: GTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCATCGTGTACTGCACCCGCTGTGGCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp CCAGCGACCCGGGTGTCTGGAAACATGGGGGACTGGTaGGCAGGGAAGAGCTCCGGATATTTGGTTGAGATC +
Preference number: 6 (lower is better)
Translates to: PATRVSGNMGDW*AGKSSGYLVEI
Trigger: GATCTCAACCAAATATCCGGAGCTCTTCCCTGCCCACCAGTCCCCCATGTTTCCAGACACCCGGGTCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 72 bp TGCCCAGTGCAAGCAGGACCACCAAAAAGACACACGTaGGCACCAGGAGTGCCACCAGCAGCCACCGGTCAT +
Preference number: 6 (lower is better)
Translates to: CPVQAGPPKRHT*APGVPPAATGH
Trigger: ATGACCGGTGGCTGCTGGTGGCACTCCTGGTGCCAACGTGTGTCTTTTTGGTGGTCCTGCTTGCACTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS TCA 72 bp TCCACAGGATCCCAGGCATCTCCGTCCAGCCACCGTTaGAGGCCTTCCAGGCCTCGTCTTCATCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: STGSQASPSSHR*RPSRPRLHLPH
Trigger: ATGAGGAAGATGAAGACGAGGCCTGGAAGGCCTTCAACGGTGGCTGGACGGAGATGCCTGGGATCCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS GCA 72 bp GGGTTGGTAGGCAGAAGGCAGATCTGGATAGTTGGCTaGGATCACGGGGATCTGGTGGTCACGGGACAAAGC +
Preference number: 6 (lower is better)
Translates to: GLVGRRQIWIVG*DHGDLVVTGQS
Trigger: GCTTTGTCCCGTGACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp TACCGGGTTGGTAGGCAGAAGGCAGATCTGGATAGTTaGCTGCGATCACGGGGATCTGGTGGTCACGGGACA +
Preference number: 6 (lower is better)
Translates to: YRVGRQKADLDS*LRSRGSGGHGT
Trigger: TGTCCCGTGACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CAA 72 bp ATCCACAGGATCCCAGGCATCTCCGTCCAGCCACCGTaGAAGGCCTTCCAGGCCTCGTCTTCATCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: IHRIPGISVQPP*KAFQASSSSSS
Trigger: TGAGGAAGATGAAGACGAGGCCTGGAAGGCCTTCAACGGTGGCTGGACGGAGATGCCTGGGATCCTGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311330.4
CDS CCA 72 bp AGAGAGAATACCGGGTTGGTAGGCAGAAGGCAGATCTaGATAGTTGGCTGCGATCACGGGGATCTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RENTGLVGRRQI*IVGCDHGDLVV
Trigger: GACCACCAGATCCCCGTGATCGCAGCCAACTATCCAGATCTGCCTTCTGCCTACCAACCCGGTATTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311330.4