RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD247 (Homo sapiens)

Ensembl gene IDs: ENSG00000198821

Ensembl transcript IDs: ENST00000362089.10, ENST00000392122.3, ENST00000470379.1, ENST00000476733.5, ENST00000479979.1, ENST00000483825.5, ENST00000485089.5

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCTGCAGCTCCCTGGTTGCACCTGGCCTAGGCTCCTTTCCATCTaGCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCC +
Preference number: 1 (lower is better)
Translates to: PLQLPGCTWPRLLSI*PSARPSHQGGTTWP
Trigger: GGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAAAGGAGCCTAGGCCAGGTGCAACCAGGGAGCTGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR GCA 90 bp GGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTaGGCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGT +
Preference number: 1 (lower is better)
Translates to: GDFTKQTQQLSCERQ*ARLPGRTRNRQETG
Trigger: ACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR TCA 90 bp CGCTTTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTaGGAGGCAGTGCGCCCGCCTCCCAGGGAGAACGAGGAACCGCCA +
Preference number: 1 (lower is better)
Translates to: RFLWGLYKTDSTTQL*EAVRPPPRENEEPP
Trigger: TGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 90 bp TCCATCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATaGCCCAGTACAGTTACCTTGAAAGGAGGTGAAGGTGACAACAGA +
Preference number: 1 (lower is better)
Translates to: SICPSARPSHQGGTT*PSTVTLKGGEGDNR
Trigger: TCTGTTGTCACCTTCACCTCCTTTCAAGGTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 90 bp AGCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATaGTACAGTTCAATGGTGCGGCACAGAGGCCTGAGGCAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: SSSRSVCSSSGPCST*YSSMVRHRGLRQGG
Trigger: GCCTCCCTGCCTCAGGCCTCTGTGCCGCACCATTGAACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 90 bp TCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTaGGTCTTCCTGCGAGGCCTTCACAAAGATGATTTTGTCATTCGC +
Preference number: 1 (lower is better)
Translates to: SCPATVRWAVIGPMC*VFLRGLHKDDFVIR
Trigger: GCGAATGACAAAATCATCTTTGTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 90 bp TATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTaGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTT +
Preference number: 1 (lower is better)
Translates to: YPSTLTGFSCPATVR*AVIGPMCWVFLRGL
Trigger: AAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR TCA 90 bp GGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACCTTaGAAGGAGGTGAAGGTGACAACAGAAGCCAAATTTACAGCAGGA +
Preference number: 1 (lower is better)
Translates to: GPLTREAQHGPVQLP*KEVKVTTEAKFTAG
Trigger: TCCTGCTGTAAATTTGGCTTCTGTTGTCACCTTCACCTCCTTTCAAGGTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR TCA 90 bp TGGGTCTTCCTGCGAGGCCTTCACAAAGATGATTTTGTCATTCGCTaGAAGCGTGAAGTGAATCAACGGCCTCCTCTTGCTCCGCAGCAC +
Preference number: 1 (lower is better)
Translates to: WVFLRGLHKDDFVIR*KREVNQRPPLAPQH
Trigger: GTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACTTCACGCTTTCAGCGAATGACAAAATCATCTTTGTGAAGGCCTCGCAGGAAGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR TCA 90 bp GAGGCCTTCACAAAGATGATTTTGTCATTCGCTGAAAGCGTGAAGTaGATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTG +
Preference number: 1 (lower is better)
Translates to: EAFTKMILSFAESVK*INGLLLLRSTLFTL
Trigger: CAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACTTCACGCTTTCAGCGAATGACAAAATCATCTTTGTGAAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR GCA 90 bp ACTCAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTaGGCTTTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGC +
Preference number: 1 (lower is better)
Translates to: TQTQSDTDIRACASI*AFSGDFTKQTQQLS
Trigger: GCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp AGAGGCAGTGCGCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTGCAGGTCTGGCCTTTaGGTGGTGAAATCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RGSAPASQGERGTARRQVCRSGL*VVKSPG
Trigger: GCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCA...GACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp CCGGCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTGCAGGTCTGGCCTTTaGGTGGTGAAATCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: PANQRAQGQGRKPWEYTPCRSGL*VVKSPG
Trigger: GCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCA...GGGAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp TCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGGGGCGTCTGCAGGTCTaGCCTTTGAGTGGTGAAATC +
Preference number: 2 (lower is better)
Translates to: SAPLPGPLTREAQHGPVQGRLQV*PLSGEI
Trigger: GATTTCACCACTCAAAGGCCAGACCTGCAGACGCCC...CTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp CACCGGCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTGGGAGTACACTCCTGTGTCTCATAATCTaGGCGTCTGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: HRQTRGPKARAVSPGSTLLCLII*ASAGLA
Trigger: GGCCAGACCTGCAGACGCCCAGATTATGAGACACAG...GAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGCCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp CCGGCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCAGGGGAATACTTCAGTaGCTGAGAAGAGTGAACCGG +
Preference number: 2 (lower is better)
Translates to: PANQRAQGQGRKPWEYTPRGILQ*LRRVNR
Trigger: CCGGTTCACTCTTCTCAGCCACTGAAGTATTCCCCT...GGGAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR GCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGCCGCCCACCTTCCCATaGCCCTGCAGCTCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWPPTFP*PCSSLV
Trigger: AACCAGGGAGCTGCAGGGGCATGGGAAGGTGGGCGG...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR GCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCTGCAGCTCCCTGGTTaGACCTGGCCTAGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLLQLPG*TWPRLL
Trigger: AAGGAGCCTAGGCCAGGTGCAACCAGGGAGCTGCAG...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACCAGGGCCGTAAGCCCTaGGAGTACACTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHQGRKP*EYTPLK
Trigger: CTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTG...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp TCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGACAACAGTCTGTGTGTaGAGGTTTGGAGCTAAATAT +
Preference number: 2 (lower is better)
Translates to: SAPLPGPLTREAQHGPVQTTVCV*RFGAKY
Trigger: ATATTTAGCTCCAAACCTTCACACACAGACTGTTGT...CTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR GCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACTCAACGGCCTCCTCTTaGTCCGCAGCACTTTATTCA +
Preference number: 2 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHSTASS*SAALYS
Trigger: TGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGA...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCTGTGTCTCATAATCTaGGCGTCTGCAGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLLCLII*ASAGLA
Trigger: GGCCAGACCTGCAGACGCCCAGATTATGAGACACAG...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp CCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACACAACAGTCTGTGTGTaGAGGTTTGGAGCTAAATAT +
Preference number: 2 (lower is better)
Translates to: PLCPALSPGRHNMAQYSYTTVCV*RFGAKY
Trigger: ATATTTAGCTCCAAACCTTCACACACAGACTGTTGT...GTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCTCAACAACTCAGCTGTaGGAGGCAGTGCGCCCGCCT +
Preference number: 2 (lower is better)
Translates to: SESTASSCSAALYSHCVTSTTQL*EAVRPP
Trigger: AGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGA...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CAA 90 bp ATCCATGGCCTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATaGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATA +
Preference number: 2 (lower is better)
Translates to: IHGLCPVMTQQYPST*TGFSCPATVRWAVI
Trigger: TATAACTGCCCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAGGCCATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CCA 90 bp CAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGCGTCTGCAGGTCTaGCCTTTGAGTGGTGAAATC +
Preference number: 2 (lower is better)
Translates to: QTQSDTDIRACASICAFSGRLQV*PLSGEI
Trigger: GATTTCACCACTCAAAGGCCAGACCTGCAGACGCCC...AGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR TCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTGATTTTGTCATTCGCTaGAAGCGTGAAGTGAATCAA +
Preference number: 2 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLDFVIR*KREVNQ
Trigger: TTGATTCACTTCACGCTTTCAGCGAATGACAAAATC...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR GCA 90 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTTCAACGGCCTCCTCTTaGTCCGCAGCACTTTATTCA +
Preference number: 2 (lower is better)
Translates to: LCPVMTQQYPSTLTGFSCSTASS*SAALYS
Trigger: TGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGA...ACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR GCA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCCACTCCCTTAAAGAGTaGAGGGACAACAGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCHSLKE*RDNSLC
Trigger: ACACAGACTGTTGTCCCTGCACTCTTTAAGGGAGTG...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR GCA 72 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTaGACCACCGGCAAACCAGAGGGCCCAAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: RENEEPPGDRST*TTGKPEGPRPG
Trigger: CCCTGGCCTTGGGCCCTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CAA 90 bp AGAGGCAGTGCGCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCCTGCAGGTCTGGCCTTaGAGTGGTGAAATCCCCTGG +
Preference number: 3 (lower is better)
Translates to: RGSAPASQGERGTARRQVLQVWP*SGEIPW
Trigger: CCAGGGGATTTCACCACTCAAAGGCCAGACCTGCAG...GACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CAA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCACTGCAGGTCTGGCCTTaGAGTGGTGAAATCCCCTGG +
Preference number: 3 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPLQVWP*SGEIPW
Trigger: CCAGGGGATTTCACCACTCAAAGGCCAGACCTGCAG...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR GCA 72 bp ACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTaGGCCCGCCTCCCAGGGAGAACGAGGAACCGCCAG +
Preference number: 3 (lower is better)
Translates to: TKQTQQLSCERQ*ARLPGRTRNRQ
Trigger: CTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 72 bp GCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTaGGAGTACACTCCCTTAAAGAGTGCAGGGACAACA +
Preference number: 3 (lower is better)
Translates to: ANQRAQGQGRKP*EYTPLKSAGTT
Trigger: TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR TCA 72 bp TGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTaGGAGGCAGTGCGCCCGCCTCCCAGGGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: WGLYKTDSTTQL*EAVRPPPRENE
Trigger: CTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 72 bp AGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATaGTACAGTTCAATGGTGCGGCACAGAGGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: RSVCSSSGPCST*YSSMVRHRGLR
Trigger: CCTCAGGCCTCTGTGCCGCACCATTGAACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 72 bp ACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTaGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: TLTGFSCPATVR*AVIGPMCWVFL
Trigger: CAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CCA 72 bp GCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTaGGTCTTCCTGCGAGGCCTTCACAAAGATGATTTT +
Preference number: 3 (lower is better)
Translates to: ATVRWAVIGPMC*VFLRGLHKDDF
Trigger: AAAATCATCTTTGTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR-3UTR CAA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGCCCAGTACAGTTACCTaGAAAGGAGGTGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWPSTVT*KGGEGD
Trigger: GTCACCTTCACCTCCTTTCAAGGTAACTGTACTGGG...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR GCA 72 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTaGGCTTTCTCTGGGGACTTTACAAAACAGACTCAA +
Preference number: 3 (lower is better)
Translates to: QSDTDIRACASI*AFSGDFTKQTQ
Trigger: TTGAGTCTGTTTTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCACTGGGAGGCAGAGGCTaGGGCAGCGGTGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPLGGRG*GSGGRD
Trigger: GTCCCGGCCACCGCTGCCTCAGCCTCTGCCTCCCAG...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp ACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGAGGGCCCAAGGCCCCGCCCACCTTCCCATaGCCCTGCAGCTCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TARRQVYLHHRQTRGPKAPPTFP*PCSSLV
Trigger: AACCAGGGAGCTGCAGGGGCATGGGAAGGTGGGCGG...GGCCTTGGGCCCTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCACAGGGAGGCTCCCGCTaGCCTCGCAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPQGGSR*PRRPWL
Trigger: CAGCCAGGGCCTGCGAGGGCAGCGGGAGCCTCCCTG...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACCAGGGAGGCTCCCGCTaGCCTCGCAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHQGGSR*PRRPWL
Trigger: CAGCCAGGGCCTGCGAGGGCAGCGGGAGCCTCCCTG...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTTAAAGAGTGCAGGGACAACAGGCCATCGTGCCCCTTaGCCCTCCGGCGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GQGRKPWEYTPLKSAGTTGHRAP*PSGARL
Trigger: AAGGCGAGCGCCGGAGGGGCAAGGGGCACGATGGCC...TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp TCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTGCAGGTCTGGCCTTTaGGTGGTGAAATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAPLPGPLTREAQHGPVQCRSGL*VVKSPG
Trigger: GCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCA...CTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCAGGGTTTTTCCTGTCCTaGCACTGTCCGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ARLPGRTRNRQETGLPAPGFFLS*HCPLGS
Trigger: ACTGCCCAGCGGACAGTGGCAGGACAGGAAAAACCC...TGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCTTGGTGGCTGTACTaGGACCCTGGTAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ARLPGRTRNRQETGLPAPPWWLY*DPGKGH
Trigger: ATGGCCTTTACCAGGGTCTCAGTACAGCCACCAAGG...TGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACTGCAGGTCTGGCCTTTaGGTGGTGAAATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLCPALSPGRHNMAQYSYCRSGL*VVKSPG
Trigger: GCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCA...GTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACAGCTGTGAGAGGCAGTaGGCCCGCCTCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHSCERQ*ARLPGR
Trigger: TCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCT...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACCCGCCCACCTTCCCATaGCCCTGCAGCTCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHPPTFP*PCSSLV
Trigger: AACCAGGGAGCTGCAGGGGCATGGGAAGGTGGGCGG...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCAGGCCCCTGTAGCACATaGTACAGTTCAATGGTGCGG +
Preference number: 4 (lower is better)
Translates to: ARLPGRTRNRQETGLPAPGPCST*YSSMVR
Trigger: CCGCACCATTGAACTGTACCATGTGCTACAGGGGCC...TGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp TCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGGGCCCCTGTAGCACATaGTACAGTTCAATGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SAPLPGPLTREAQHGPVQGPCST*YSSMVR
Trigger: CCGCACCATTGAACTGTACCATGTGCTACAGGGGCC...CTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CTTTCCATCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCGCTGAAAGCGTGAAGTaGATCAACGGCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSICPSARPSHQGGTTWPAESVK*INGLLL
Trigger: CAAGAGGAGGCCGTTGATTCACTTCACGCTTTCAGC...GGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGAGGCAGTGCGCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCCTGCTGGTTTTATTCTaGAGCTACCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGSAPASQGERGTARRQVLLVLF*SYLPRK
Trigger: CTTCCTGGGGAGGTAGCTGCAGAATAAAACCAGCAG...GACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGCGCACTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392122.3
CDS-3UTR CCA 90 bp CCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACCTGTGTCTCATAATCTaGGCGTCTGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLCPALSPGRHNMAQYSYLCLII*ASAGLA
Trigger: GGCCAGACCTGCAGACGCCCAGATTATGAGACACAG...GTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCCTGGGAGGCAGAGGCTaGGGCAGCGGTGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTLGGRG*GSGGRD
Trigger: GTCCCGGCCACCGCTGCCTCAGCCTCTGCCTCCCAG...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTCCCAGGGAGAAGCAGGATGGCCGCGGTaGAAAGCGCCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: NRLNNSAVRGSAPASQGEAGWPR*KAPSTS
Trigger: TGAAGTGGAAGGCGCTTTTCACCGCGGCCATCCTGC...TTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGGAGACAGGTCTACCTaGACCACCGGCAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPGDRST*TTGKPE
Trigger: CTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCC...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTTCCATCTGCCCCTCTaGCCGGCCCTCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPAFHLPL*PALSPG
Trigger: CCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAA...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CACCGGCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTGGGAGTACACTCTCAACGGCCTCCTCTTaGTCCGCAGCACTTTATTCA +
Preference number: 4 (lower is better)
Translates to: HRQTRGPKARAVSPGSTLSTASS*SAALYS
Trigger: TGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGA...GAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGCCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CTTTCCATCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCTGTGTTGGGTCTTCCTaGGAGGCCTTCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSICPSARPSHQGGTTWPCVGSS*EAFTKM
Trigger: CATCTTTGTGAAGGCCTCGCAGGAAGACCCAACACA...GGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCACTGGCCTTTGAGTGGTaGAATCCCCTGGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPLAFEW*NPLAVS
Trigger: GCTAACAGCCAGGGGATTTCACCACTCAAAGGCCAG...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CACCGGCAAACCAGAGGGCCCAAGGCCAGGGCCGTAAGCCCTGGGAGTACACTCCACTCCCTTAAAGAGTaGAGGGACAACAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HRQTRGPKARAVSPGSTLHSLKE*RDNSLC
Trigger: ACACAGACTGTTGTCCCTGCACTCTTTAAGGGAGTG...GAGTGTACTCCCAGGGCTTACGGCCCTGGCCTTGGGCCCTCTGGTTTGCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACGGAGACAGGTCTACCTaGACCACCGGCAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHGDRST*TTGKPE
Trigger: CTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCC...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGTTCCATCTGCCCCTCTaGCCGGCCCTCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWFHLPL*PALSPG
Trigger: CCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAA...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACTGGTTCTGGCCCTGCTaGTACGCGGGGGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QSDTDIRACASICAFSGDWFWPC*YAGASA
Trigger: CGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCA...GTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp AACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTCCCAGGGAGAAAGTGGTGAAATCCCCTaGCTGTTAGCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NRLNNSAVRGSAPASQGESGEIP*LLARGQ
Trigger: CTGCCCCCTCGCTAACAGCCAGGGGATTTCACCACT...TTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTCCCAGGGAGAACCTTGGTGGCTGTACTaGGACCCTGGTAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NRLNNSAVRGSAPASQGEPWWLY*DPGKGH
Trigger: ATGGCCTTTACCAGGGTCTCAGTACAGCCACCAAGG...TTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTCAACAACTCAGCTGTaGGAGGCAGTGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPASTTQL*EAVRPP
Trigger: AGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGA...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCAAGTATCCTAGTACATTaGCGGGTTTTTCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ARLPGRTRNRQETGLPAPSILVH*RVFPVL
Trigger: CAGGACAGGAAAAACCCGTCAATGTACTAGGATACT...TGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGCCATCGTGCCCCTTaGCCCTCCGGCGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: QTQSDTDIRACASICAFSGHRAP*PSGARL
Trigger: AAGGCGAGCGCCGGAGGGGCAAGGGGCACGATGGCC...AGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCCTGCAGCTCCCTGGTTaGACCTGGCCTAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPALQLPG*TWPRLL
Trigger: AAGGAGCCTAGGCCAGGTGCAACCAGGGAGCTGCAG...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTTAAAGAGTGCAGGGACAACAGCAGGTAGCAGAGTTTaGGATCCAGCAGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GQGRKPWEYTPLKSAGTTAGSRV*DPAGQS
Trigger: GCTTTGGCCTGCTGGATCCCAAACTCTGCTACCTGC...TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCTGGTTCTGGCCCTGCTaGTACGCGGGGGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTWFWPC*YAGASA
Trigger: CGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCA...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTTAAAGAGTGCAGGGACAACAGGGCGTCTGCAGGTCTaGCCTTTGAGTGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: GQGRKPWEYTPLKSAGTTGRLQV*PLSGEI
Trigger: GATTTCACCACTCAAAGGCCAGACCTGCAGACGCCC...TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGGCAGGATGGCCGCGGTaGAAAGCGCCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWAGWPR*KAPSTS
Trigger: TGAAGTGGAAGGCGCTTTTCACCGCGGCCATCCTGC...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTTAAAGAGTGCAGGGACAACACATTCGCTGAAAGCGTaGAGTGAATCAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQGRKPWEYTPLKSAGTTHSLKA*SESTAS
Trigger: GGAGGCCGTTGATTCACTTCACGCTTTCAGCGAATG...TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTTGTAATCGGCAACTGTaGCTGCAGGATGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLCNRQL*LQDGRG
Trigger: ACCGCGGCCATCCTGCAGGCACAGTTGCCGATTACA...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACGTACGCGGGGGCGTCTaGGCTCCTGCTGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: QSDTDIRACASICAFSGDVRGGV*APAELH
Trigger: GTGAAGTTCAGCAGGAGCGCAGACGCCCCCGCGTAC...GTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CTTTCCATCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCGCCATCTTATCTTTCTaGAGTTCATTGTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSICPSARPSHQGGTTWPAILSF*SSLYRP
Trigger: AGGCCTGTACAATGAACTGCAGAAAGATAAGATGGC...GGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGCTGCAGCTCCCTGGTTaGACCTGGCCTAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWLQLPG*TWPRLL
Trigger: AAGGAGCCTAGGCCAGGTGCAACCAGGGAGCTGCAG...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp ACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGAGGGCCCAAGGCCAGGCCTTCACAAAGATaGTTTTGTCATTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TARRQVYLHHRQTRGPKARPSQR*FCHSLK
Trigger: TTTCAGCGAATGACAAAATCATCTTTGTGAAGGCCT...GGCCTTGGGCCCTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAAGCTGGTTCTGGCCCTaGTGGTACGCGGGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASASWFWP*WYAGAS
Trigger: AGACGCCCCCGCGTACCAGCAGGGCCAGAACCAGCT...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GAGAAGAGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGAGCTGTGAGAGGCAGTaGGCCCGCCTCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKSEPGCKCFILCLIIWASCERQ*ARLPGR
Trigger: TCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCT...CGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACTTTTATGCCACTTTGTaGACAGCTCATCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLCPALSPGRHNMAQYSYFYATL*TAHQGQ
Trigger: CTGACCTTGATGAGCTGTGCACAAAGTGGCATAAAA...GTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCGCAGGTAGCAGAGTTTaGGATCCAGCAGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPAAGSRV*DPAGQS
Trigger: GCTTTGGCCTGCTGGATCCCAAACTCTGCTACCTGC...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTGGGCGTCTGCAGGTCTaGCCTTTGAGTGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLGRLQV*PLSGEI
Trigger: GATTTCACCACTCAAAGGCCAGACCTGCAGACGCCC...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp AACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCTCCCAGGGAGAAAGGGGAATACTTCAGTaGCTGAGAAGAGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: NRLNNSAVRGSAPASQGERGILQ*LRRVNR
Trigger: CCGGTTCACTCTTCTCAGCCACTGAAGTATTCCCCT...TTCTCCCTGGGAGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCCAGGGCCGTAAGCCCTaGGAGTACACTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPAQGRKP*EYTPLK
Trigger: CTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTG...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACAGCGTTTTCCATCCATaGCCTGTGCCCTGTAATGAC +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHSVFHP*PVPCND
Trigger: GTCATTACAGGGCACAGGCCATGGATGGAAAACGCT...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTAGGCTGAGGCAGCGGTaGCCGGGACGGTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AHQGQSVHLLAPVAHGTVRLRQR*PGRLGE
Trigger: TTCTCCTAACCGTCCCGGCCACCGCTGCCTCAGCCT...AACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392122.3
CDS-3UTR TCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACCCAGTACAGTTACCTTaGAAGGAGGTGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHPVQLP*KEVKVT
Trigger: TGTCACCTTCACCTCCTTTCAAGGTAACTGTACTGG...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCGCTGAAAGCGTGAAGTaGATCAACGGCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPAAESVK*INGLLL
Trigger: CAAGAGGAGGCCGTTGATTCACTTCACGCTTTCAGC...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACATCGGCAACTGTGCCTaGAGGATGGCCGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QSDTDIRACASICAFSGDIGNCA*RMAAVK
Trigger: TTTCACCGCGGCCATCCTGCAGGCACAGTTGCCGAT...GTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAGTACGCGGGGGCGTCTaGGCTCCTGCTGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASAVRGGV*APAELH
Trigger: GTGAAGTTCAGCAGGAGCGCAGACGCCCCCGCGTAC...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GGCCAGGGCCGTAAGCCCTGGGAGTACACTCCCTTAAAGAGTGCAGGGACAACACACTCCCTTAAAGAGTaGAGGGACAACAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GQGRKPWEYTPLKSAGTTHSLKE*RDNSLC
Trigger: ACACAGACTGTTGTCCCTGCACTCTTTAAGGGAGTG...TGTTGTCCCTGCACTCTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp TTCCTGTCCTGCCACTGTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTATAGGTCCCATGTGTTaGGTCTTCCTGCGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FLSCHCPLGSYRSHVLGLIGPMC*VFLRGL
Trigger: AAGGCCTCGCAGGAAGACCCAACACATGGGACCTAT...AAGACCCAACACATGGGACCTATAACTGCCCAGCGGACAGTGGCAGGACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
3UTR CAA 72 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATaGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPVMTQQYPST*TGFSCPATVRW
Trigger: CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCTCAACAACTCAGCTGTaGGAGGCAGTGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCSTTQL*EAVRPP
Trigger: AGGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGA...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGATTTTGTCATTCGCTaGAAGCGTGAAGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPDFVIR*KREVNQ
Trigger: TTGATTCACTTCACGCTTTCAGCGAATGACAAAATC...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCTTGTACAGGCCTTCCTaGGGGTTCTTCCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTLYRPS*GFFLLG
Trigger: GCCGAGAAGGAAGAACCCTCAGGAAGGCCTGTACAA...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392122.3
CDS-3UTR GCA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCATCGGCAACTGTGCCTaGAGGATGGCCGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCIGNCA*RMAAVK
Trigger: TTTCACCGCGGCCATCCTGCAGGCACAGTTGCCGAT...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGTCAACGGCCTCCTCTTaGTCCGCAGCACTTTATTCA +
Preference number: 4 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWSTASS*SAALYS
Trigger: TGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGA...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTTCCATCCATGGCCTGTaGCCTGTAATGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AHQGQSVHLLAPVAHGTVSIHGL*PVMTQQ
Trigger: CTGCTGCGTCATTACAGGGCACAGGCCATGGATGGA...AACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCCTGTGTCTCATAATCTaGGCGTCTGCAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTLCLII*ASAGLA
Trigger: GGCCAGACCTGCAGACGCCCAGATTATGAGACACAG...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCCCTGCCACTGTCCGCTaGGCAGTTATAGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCPATVR*AVIGPM
Trigger: CATGGGACCTATAACTGCCCAGCGGACAGTGGCAGG...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GAGAAGAGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGCCTGCCACTGTCCGCTaGGCAGTTATAGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: EKSEPGCKCFILCLIIWAPATVR*AVIGPM
Trigger: CATGGGACCTATAACTGCCCAGCGGACAGTGGCAGG...CGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACTCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp GTCCGCTGGGCAGTTATAGGTCCCATGTGTTGGGTCTTCCTGCGAGGCCTTCACAGGCCTTCACAAAGATaGTTTTGTCATTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VRWAVIGPMCWVFLRGLHRPSQR*FCHSLK
Trigger: TTTCAGCGAATGACAAAATCATCTTTGTGAAGGCCT...GTGAAGGCCTCGCAGGAAGACCCAACACATGGGACCTATAACTGCCCAGCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp ATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACTTTACAATGTAATCGGCAACTGTaGCTGCAGGATGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: IQTLGHVLASALSLGTLQCNRQL*LQDGRG
Trigger: ACCGCGGCCATCCTGCAGGCACAGTTGCCGATTACA...TTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp ATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACTTTACAAGGGTTTTTCCTGTCCTaGCACTGTCCGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IQTLGHVLASALSLGTLQGFFLS*HCPLGS
Trigger: ACTGCCCAGCGGACAGTGGCAGGACAGGAAAAACCC...TTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTTCCATCCATGGCCTGTaGCCTGTAATGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTQSDTDIRACASICAFSSIHGL*PVMTQQ
Trigger: CTGCTGCGTCATTACAGGGCACAGGCCATGGATGGA...AGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCCAGGGCCGTAAGCCCTaGGAGTACACTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCQGRKP*EYTPLK
Trigger: CTTTAAGGGAGTGTACTCCCAGGGCTTACGGCCCTG...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCGCCCGCCCATCTGCGCTTTCTCTaGGGACTTTACAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: GTLQNRLNNSAVRGSAPAHLRFL*GLYKTD
Trigger: GTCTGTTTTGTAAAGTCCCCAGAGAAAGCGCAGATG...GGCGGGCGCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCCAGGGAGGCACAACATaGCCCAGTACAGTTACCTTG +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTQGGTT*PSTVTL
Trigger: CAAGGTAACTGTACTGGGCCATGTTGTGCCTCCCTG...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTATAGGTCCCATGTGTTaGGTCTTCCTGCGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AHQGQSVHLLAPVAHGTVIGPMC*VFLRGL
Trigger: AAGGCCTCGCAGGAAGACCCAACACATGGGACCTAT...AACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACAGCGTTTTCCATCCATaGCCTGTGCCCTGTAATGAC +
Preference number: 4 (lower is better)
Translates to: QSDTDIRACASICAFSGDSVFHP*PVPCND
Trigger: GTCATTACAGGGCACAGGCCATGGATGGAAAACGCT...GTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp ATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACTTTACAACTGGCCTTTGAGTGGTaGAATCCCCTGGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: IQTLGHVLASALSLGTLQLAFEW*NPLAVS
Trigger: GCTAACAGCCAGGGGATTTCACCACTCAAAGGCCAG...TTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACCCAGTACAGTTACCTTaGAAGGAGGTGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: QSDTDIRACASICAFSGDPVQLP*KEVKVT
Trigger: TGTCACCTTCACCTCCTTTCAAGGTAACTGTACTGG...GTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTCATTCGCTGAAAGCGTaGAGTGAATCAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QTQSDTDIRACASICAFSHSLKA*SESTAS
Trigger: GGAGGCCGTTGATTCACTTCACGCTTTCAGCGAATG...AGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCACAGGCCAAAGCTCTGTaGCTCTGTAATCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASAQAKAL*LCNRQL
Trigger: CAGTTGCCGATTACAGAGGCACAGAGCTTTGGCCTG...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp CAGACACAGAGTGATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTCAGGGAGGCACAACATaGCCCAGTACAGTTACCTTG +
Preference number: 4 (lower is better)
Translates to: QTQSDTDIRACASICAFSQGGTT*PSTVTL
Trigger: CAAGGTAACTGTACTGGGCCATGTTGTGCCTCCCTG...AGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTATCACTCTGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp ATACAGACATTAGGGCATGTGCTAGCATCTGCGCTTTCTCTGGGGACTTTACAATTGTACAGGCCTTCCTaGGGGTTCTTCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IQTLGHVLASALSLGTLQLYRPS*GFFLLC
Trigger: GCAGAGAAGGAAGAACCCTCAGGAAGGCCTGTACAA...TTGTAAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGCCCTAATGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362089.10
CDS-3UTR GCA 90 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTGCATGTGCTAGCATCTaGGCTTTCTCTGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: LCPVMTQQYPSTLTGFSCACASI*AFSGDF
Trigger: AAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGC...ACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAGCATGTGCTAGCATCTaGGCTTTCTCTGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASAACASI*AFSGDF
Trigger: AAAGTCCCCAGAGAAAGCGCAGATGCTAGCACATGC...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp CAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCCTGCCACTGTCCGCTGGTTTTATGCCACTTTGTaGACAGCTCATCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QQYPSTLTGFSCPATVRWFYATL*TAHQGQ
Trigger: CTGACCTTGATGAGCTGTGCACAAAGTGGCATAAAA...CCAGCGGACAGTGGCAGGACAGGAAAAACCCGTCAATGTACTAGGATACTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp GAGAAGAGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTGTGTTGGGTCTTCCTaGGAGGCCTTCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: EKSEPGCKCFILCLIIWACVGSS*EAFTKM
Trigger: CATCTTTGTGAAGGCCTCGCAGGAAGACCCAACACA...CGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GAGAAGAGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGAGGGGAATACTTCAGTaGCTGAGAAGAGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: EKSEPGCKCFILCLIIWARGILQ*LRRVNR
Trigger: CCGGTTCACTCTTCTCAGCCACTGAAGTATTCCCCT...CGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CCA 90 bp GCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTCATCTGCGCTTTCTCTaGGGACTTTACAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: AHQGQSVHLLAPVAHGTVHLRFL*GLYKTD
Trigger: GTCTGTTTTGTAAAGTCCCCAGAGAAAGCGCAGATG...AACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR TCA 90 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTAGTATCCTAGTACATTaGCGGGTTTTTCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LCPVMTQQYPSTLTGFSCSILVH*RVFPVL
Trigger: CAGGACAGGAAAAACCCGTCAATGTACTAGGATACT...ACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCGCCATCTTATCTTTCTaGAGTTCATTGTACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTAILSF*SSLYRP
Trigger: AGGCCTGTACAATGAACTGCAGAAAGATAAGATGGC...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAGAGAAAAGGAGTCTCTaGTGGTTTTATTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASAEKRSL*WFYSAA
Trigger: AGCTGCAGAATAAAACCAGCAGAGACTCCTTTTCTC...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392122.3
CDS-3UTR TCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAACAACAGTCTGTGTGTaGAGGTTTGGAGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASATTVCV*RFGAKY
Trigger: ATATTTAGCTCCAAACCTTCACACACAGACTGTTGT...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAATCAACGGCCTCCTCTTGCTCCGCAGCACTTTATTCACACTGTGTAACCAGGAAGGCTTTAGCATaGCAGTATAAATTAAAACAG +
Preference number: 4 (lower is better)
Translates to: SESTASSCSAALYSHCVTRKALA*QYKLKQ
Trigger: CTGTTTTAATTTATACTGGCATGCTAAAGCCTTCCT...GGTTACACAGTGTGAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGATTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR GCA 90 bp AGTGAACCGGGTTGTAAATGCTTCATCCTGTGTCTCATAATCTGGGCGTCTGCAAGGAAGGCTTTAGCATaGCAGTATAAATTAAAACAG +
Preference number: 4 (lower is better)
Translates to: SEPGCKCFILCLIIWASARKALA*QYKLKQ
Trigger: CTGTTTTAATTTATACTGGCATGCTAAAGCCTTCCT...TGCAGACGCCCAGATTATGAGACACAGGATGAAGCATTTACAACCCGGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS GCA 90 bp TCTGCGCTCCTGCTGAACTGCAACACAGAAAGCAAAGCGCGTTACTaGTCCGCGAGGGCGCGCAGGGGAGCCGGGGTGCCAGGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: SALLLNCNTESKARY*SARARRGAGVPGRA
Trigger: CGCGCGCCCTGGCACCCCGGCTCCCCTGCGCGCCCTCGCGGAGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 90 bp TTCTGGCCCTGCTGGTACGCGGGGGCGTCTGCGCTCCTGCTGAACTaGAACACAGAAAGCAAAGCGCGTTACTGCTCCGCGAGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: FWPCWYAGASALLLN*NTESKARYCSARAR
Trigger: GCGCGCCCTCGCGGAGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS TCA 90 bp GCTGGTTCTGGCCCTGCTGGTACGCGGGGGCGTCTGCGCTCCTGCTaGACTGCAACACAGAAAGCAAAGCGCGTTACTGCTCCGCGAGGG +
Preference number: 5 (lower is better)
Translates to: AGSGPAGTRGRLRSC*TATQKAKRVTAPRG
Trigger: CCCTCGCGGAGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS-3UTR CAA 90 bp GCCCGCCTCCCAGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACTGCAGGTCTGGCCTTaGAGTGGTGAAATCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARLPGRTRNRQETGLPAPLQVWP*SGEIPW
Trigger: CCAGGGGATTTCACCACTCAAAGGCCAGACCTGCAG...TGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCTGGGAGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS CCA 90 bp GACACTGCCACCTCCTCCTCAGCCCACTCAAGGCACACACTTGGCTaGTCCTTGCTTTGCTCCTGGATACCAAGCCCCAGGCACCACCCG +
Preference number: 5 (lower is better)
Translates to: DTATSSSAHSRHTLG*SLLCSWIPSPRHHP
Trigger: CGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGTGGCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS-3UTR CAA 90 bp CTTTCCATCTGCCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCTCCCGGCCACGTCTCTaGTCCAAAACATCGTACTCC +
Preference number: 5 (lower is better)
Translates to: LSICPSARPSHQGGTTWPSRPRL*SKTSYS
Trigger: GGAGTACGATGTTTTGGACAAGAGACGTGGCCGGGA...GGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGGCAGATGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS GCA 90 bp CACAGGAGGGGCGGGGAGGCATCTCCTTCACAGAAGGCTGCCACCTaGAAGGGTCTCCTGCATGGCAACCCAGATCGACAATCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: HRRGGEASPSQKAAT*KGLLHGNPDRQSGF
Trigger: GAACCCTGATTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAAGGAGATGCCTCCCCGCCCCTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 90 bp GCCAGACACTGCCACCTCCTCCTCAGCCCACTCAAGGCACACACTTaGCTGGTCCTTGCTTTGCTCCTGGATACCAAGCCCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: ARHCHLLLSPLKAHT*LVLALLLDTKPQAP
Trigger: TGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGTGGCAGTGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS-3UTR CAA 90 bp ACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGAGGGCCCAAGGCCATCAACGGCCTCCTCTaGCTCCGCAGCACTTTATTC +
Preference number: 5 (lower is better)
Translates to: TARRQVYLHHRQTRGPKAINGLL*LRSTLF
Trigger: GAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGAT...GGCCTTGGGCCCTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CAA 90 bp CCCCTCTGCCCGGCCCTCTCACCAGGGAGGCACAACATGGCCCAGTACAGTTACTATAGGTCCCATGTGTaGGGTCTTCCTGCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLCPALSPGRHNMAQYSYYRSHV*GLPARP
Trigger: AGGCCTCGCAGGAAGACCCAACACATGGGACCTATA...GTAACTGTACTGGGCCATGTTGTGCCTCCCTGGTGAGAGGGCCGGGCAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CAA 90 bp GCTCATCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTAGGCCATCGTGCCCCTaGCCCCTCCGGCGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: AHQGQSVHLLAPVAHGTVRPSCP*PLRRSP
Trigger: AGGCGAGCGCCGGAGGGGCAAGGGGCACGATGGCCT...AACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS GCA 90 bp CTCGTTATAGAGCTGGTTCTGGCCCTGCTGGTACGCGGGGGCGTCTaGGCTCCTGCTGAACTGCAACACAGAAAGCAAAGCGCGTTACTG +
Preference number: 5 (lower is better)
Translates to: LVIELVLALLVRGGV*APAELQHRKQSALL
Trigger: CAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCAGCTCTATAACGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 90 bp GGGAGGCATCTCCTTCACAGAAGGCTGCCACCTGCAAGGGTCTCCTaGATGGCAACCCAGATCGACAATCAGGGTTCAGGGTCACACCCA +
Preference number: 5 (lower is better)
Translates to: GRHLLHRRLPPARVS*MATQIDNQGSGSHP
Trigger: TGGGTGTGACCCTGAACCCTGATTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAAGGAGATGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 90 bp TCAGCCCACTCAAGGCACACACTTGGCTGGTCCTTGCTTTGCTCCTaGATACCAAGCCCCAGGCACCACCCGAGCTTGAGACCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SAHSRHTLGWSLLCS*IPSPRHHPSLRPSK
Trigger: CTTGGAAGGTCTCAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 90 bp GGCATCTCCTTCACAGAAGGCTGCCACCTGCAAGGGTCTCCTGCATaGCAACCCAGATCGACAATCAGGGTTCAGGGTCACACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GISFTEGCHLQGSPA*QPRSTIRVQGHTQE
Trigger: CTCCTGGGTGTGACCCTGAACCCTGATTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAAGGAGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS-3UTR CAA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCATCCCGGCCACGTCTCTaGTCCAAAACATCGTACTCC +
Preference number: 5 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPSRPRL*SKTSYS
Trigger: GGAGTACGATGTTTTGGACAAGAGACGTGGCCGGGA...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CAA 90 bp TTCTCTGGGGACTTTACAAAACAGACTCAACAACTCAGCTGTGAGAGGCAGTGCAGGCCATCGTGCCCCTaGCCCCTCCGGCGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: FSGDFTKQTQQLSCERQCRPSCP*PLRRSP
Trigger: AGGCGAGCGCCGGAGGGGCAAGGGGCACGATGGCCT...GCACTGCCTCTCACAGCTGAGTTGTTGAGTCTGTTTTGTAAAGTCCCCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS TCA 90 bp CTGTGTCTCATAATCTGGGCGTCTGCAGGTCTGGCCTTTGAGTGGTaGAATCCCCTGGCTGTTAGCGAGGGGGCAGGGCCTGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: LCLIIWASAGLAFEW*NPLAVSEGAGPACE
Trigger: TTCACATGCAGGCCCTGCCCCCTCGCTAACAGCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCAGACGCCCAGATTATGAGACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362089.10
ENST00000392122.3
ENST00000470379.1
ENST00000476733.5
ENST00000483825.5
ENST00000485089.5
CDS CCA 90 bp CCTTTCCCTCAGAAAGAGGCTGGGAGGCAGAGGCTGAGGCAGCGGTaGCCGGGACGGTTAGGAGAAAAGGAGTCTCTGCTGGTTTTATTC +
Preference number: 5 (lower is better)
Translates to: PFPQKEAGRQRLRQR*PGRLGEKESLLVLF
Trigger: GAATAAAACCAGCAGAGACTCCTTTTCTCCTAACCGTCCCGGCCACCGCTGCCTCAGCCTCTGCCTCCCAGCCTCTTTCTGAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392122.3
ENST00000479979.1
CDS-3UTR CAA 90 bp ACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCAGAGGGCCCAAGGCCCAGTATCCTAGTACATaGACGGGTTTTTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TARRQVYLHHRQTRGPKAQYPST*TGFSCP
Trigger: AGGACAGGAAAAACCCGTCAATGTACTAGGATACTG...GGCCTTGGGCCCTCTGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CAA 90 bp AGGGAGAACGAGGAACCGCCAGGAGACAGGTCTACCTGCACCACCGGCAAACCACCCAGTACAGTTACCTaGAAAGGAGGTGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: RENEEPPGDRSTCTTGKPPSTVT*KGGEGD
Trigger: GTCACCTTCACCTCCTTTCAAGGTAACTGTACTGGG...TGGTTTGCCGGTGGTGCAGGTAGACCTGTCTCCTGGCGGTTCCTCGTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS TCA 90 bp AGCCCTTTGGAGTCTCCTCCGAGCTGCCAGCTCTTTGCACTGAGCTaGGGGGCTCAAGTTAGGCTCAAAAAGATAGGAGGTGGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: SPLESPPSCQLFALS*GAQVRLKKIGGGVL
Trigger: TAGAACTCCACCTCCTATCTTTTTGAGCCTAACTTGAGCCCCTCAGCTCAGTGCAAAGAGCTGGCAGCTCGGAGGAGACTCCAAAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS GCA 90 bp AGCATCTGTGGGAAGCTGACACAGCCTCACTCCTGCTTCACTTCATaGCGCTTCAGGCGGGAGAAACTGCAATGTCTTACAGATCTAGAG +
Preference number: 5 (lower is better)
Translates to: SICGKLTQPHSCFTS*RFRREKLQCLTDLE
Trigger: CTCTAGATCTGTAAGACATTGCAGTTTCTCCCGCCTGAAGCGGCATGAAGTGAAGCAGGAGTGAGGCTGTGTCAGCTTCCCACAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 90 bp CTCGGCACTTTTCAGCTAAGGAGACTTTCTAGAAGCAGGTGCTGCTaGAGGCCGCAAGCAGGTGAGACATTACTCGATCCAAGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LGTFQLRRLSRSRCC*RPQAGETLLDPRRE
Trigger: TTCCCTTCTTGGATCGAGTAATGTCTCACCTGCTTGCGGCCTGCAGCAGCACCTGCTTCTAGAAAGTCTCCTTAGCTGAAAAGTGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 90 bp ATTCTCCCCTTTACTCCTAAATTCTTCCAATCTCTGCCCACACCATaGCCAGCCCCACGAAGAAATCCAGGGTCTGCAAGGCACCAAGTG +
Preference number: 5 (lower is better)
Translates to: ILPFTPKFFQSLPTP*PAPRRNPGSARHQV
Trigger: CACTTGGTGCCTTGCAGACCCTGGATTTCTTCGTGGGGCTGGTCATGGTGTGGGCAGAGATTGGAAGAATTTAGGAGTAAAGGGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 90 bp GAAAGGCTAACATGGCCTTCATTCACACTTGGAAAGAAGGACCTCTaGCTGAGTGTAAGCCCCTTTGTCACCAGTAGCATCGCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ERLTWPSFTLGKKDL*LSVSPFVTSSIAFP
Trigger: AGGGAAGGCGATGCTACTGGTGACAAAGGGGCTTACACTCAGGCAGAGGTCCTTCTTTCCAAGTGTGAATGAAGGCCATGTTAGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 90 bp TTACTCGGCACTTTTCAGCTAAGGAGACTTTCTAGAAGCAGGTGCTaGTGCAGGCCGCAAGCAGGTGAGACATTACTCGATCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLGTFQLRRLSRSRC*CRPQAGETLLDPRR
Trigger: CCTTCTTGGATCGAGTAATGTCTCACCTGCTTGCGGCCTGCAGCAGCACCTGCTTCTAGAAAGTCTCCTTAGCTGAAAAGTGCCGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS GCA 90 bp AGATTACTCGGCACTTTTCAGCTAAGGAGACTTTCTAGAAGCAGGTaGTGCTGCAGGCCGCAAGCAGGTGAGACATTACTCGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: RLLGTFQLRRLSRSR*CCRPQAGETLLDPR
Trigger: TCTTGGATCGAGTAATGTCTCACCTGCTTGCGGCCTGCAGCAGCACCTGCTTCTAGAAAGTCTCCTTAGCTGAAAAGTGCCGAGTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS-3UTR CAA 90 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTATCAACGGCCTCCTCTaGCTCCGCAGCACTTTATTC +
Preference number: 5 (lower is better)
Translates to: LCPVMTQQYPSTLTGFSCINGLL*LRSTLF
Trigger: GAATAAAGTGCTGCGGAGCAAGAGGAGGCCGTTGAT...ACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS CCA 90 bp AAGGGCCTTTTCAAGAGAAAGGCTAACATGGCCTTCATTCACACTTaGAAAGAAGGACCTCTGCCTGAGTGTAAGCCCCTTTGTCACCAG +
Preference number: 5 (lower is better)
Translates to: KGLFKRKANMAFIHT*KEGPLPECKPLCHQ
Trigger: CTGGTGACAAAGGGGCTTACACTCAGGCAGAGGTCCTTCTTTCCAAGTGTGAATGAAGGCCATGTTAGCCTTTCTCTTGAAAAGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS-3UTR CAA 90 bp TCAAGGTCAGTCTGTTCATCTTCTGGCCCCTGTAGCACATGGTACAGTTCAATGCCCAGTACAGTTACCTaGAAAGGAGGTGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: SRSVCSSSGPCSTWYSSMPSTVT*KGGEGD
Trigger: GTCACCTTCACCTCCTTTCAAGGTAACTGTACTGGG...CATTGAACTGTACCATGTGCTACAGGGGCCAGAAGATGAACAGACTGACCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS-3UTR CAA 90 bp ATAAAGGGGAATACTTCAGTGGCTGAGAAGAGTGAACCGGGTTGTAAATGCTTCTATAGGTCCCATGTGTaGGGTCTTCCTGCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: IKGNTSVAEKSEPGCKCFYRSHV*GLPARP
Trigger: AGGCCTCGCAGGAAGACCCAACACATGGGACCTATA...GAAGCATTTACAACCCGGTTCACTCTTCTCAGCCACTGAAGTATTCCCCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS TCA 90 bp CCATCTTATCTTTCTGCAGTTCCTGCAGAAGAGGGCGTGGAACACTaGTTTTTACCAACTAATGCAGAAAGCAGCAGGTTCCCCTACAAC +
Preference number: 5 (lower is better)
Translates to: PSYLSAVPAEEGVEH*FLPTNAESSRFPYN
Trigger: GTTGTAGGGGAACCTGCTGCTTTCTGCATTAGTTGGTAAAAATCAGTGTTCCACGCCCTCTTCTGCAGGAACTGCAGAAAGATAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS-3UTR CAA 90 bp CTGTGCCCTGTAATGACGCAGCAGTATCCTAGTACATTGACGGGTTTTTCCTGTCAGTATCCTAGTACATaGACGGGTTTTTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LCPVMTQQYPSTLTGFSCQYPST*TGFSCP
Trigger: AGGACAGGAAAAACCCGTCAATGTACTAGGATACTG...ACAGGAAAAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000362089.10
ENST00000392122.3
CDS TCA 90 bp TATGCCAAAGTCCAAAATTCAAACAAGAAATGGGTTGAGAAGCACTaGAGTGATGACTGGGACTGGATTCTCCCCTTTACTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: YAKVQNSNKKWVEKH*SDDWDWILPFTPKF
Trigger: GAATTTAGGAGTAAAGGGGAGAATCCAGTCCCAGTCATCACTTCAGTGCTTCTCAACCCATTTCTTGTTTGAATTTTGGACTTTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 72 bp GCGCGGCGACCCGAGGGACAGCCCTACTCCGCTCCTTaGCAACTAACAATGCTGCCCTGCCTCCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: ARRPEGQPYSAP*QLTMLPCLLGL
Trigger: CAGCCCCAGGAGGCAGGGCAGCATTGTTAGTTGCCAAGGAGCGGAGTAGGGCTGTCCCTCGGGTCGCCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS CAA 72 bp CGCGCGGCGACCCGAGGGACAGCCCTACTCCGCTCCTaGGCAACTAACAATGCTGCCCTGCCTCCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: RAATRGTALLRS*ATNNAALPPGA
Trigger: AGCCCCAGGAGGCAGGGCAGCATTGTTAGTTGCCAAGGAGCGGAGTAGGGCTGTCCCTCGGGTCGCCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 72 bp CTGCTGAACTGCAACACAGAAAGCAAAGCGCGTTACTaGTCCGCGAGGGCGCGCAGGGGAGCCGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: LLNCNTESKARY*SARARRGAGVP
Trigger: TGGCACCCCGGCTCCCCTGCGCGCCCTCGCGGAGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 72 bp GAGCTGGTTCTGGCCCTGCTGGTACGCGGGGGCGTCTaGGCTCCTGCTGAACTTCACTCTCAGGAACAAGGC +
Preference number: 6 (lower is better)
Translates to: ELVLALLVRGGV*APAELHSQEQG
Trigger: GCCTTGTTCCTGAGAGTGAAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362089.10
ENST00000392122.3
ENST00000483825.5
CDS CAA 90 bp GCCACCTCCTCCTCAGCCCACTCAAGGCACACACTTGGCTGGTCCTaGCTTTGCTCCTGGATACCAAGCCCCAGGCACCACCCGAGCTTG +
Preference number: 6 (lower is better)
Translates to: ATSSSAHSRHTLGWS*LCSWIPSPRHHPSL
Trigger: CAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS TCA 72 bp GGCCCTGCTGGTACGCGGGGGCGTCTGCGCTCCTGCTaGACTGCAACACAGAAAGCAAAGCGCGTTACTGCT +
Preference number: 6 (lower is better)
Translates to: GPAGTRGRLRSC*TATQKAKRVTA
Trigger: AGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 72 bp TGCTGGTACGCGGGGGCGTCTGCGCTCCTGCTGAACTaGAACACAGAAAGCAAAGCGCGTTACTGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: CWYAGASALLLN*NTESKARYCSA
Trigger: CGCGGAGCAGTAACGCGCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS GCA 72 bp GAGCTGGTTCTGGCCCTGCTGGTACGCGGGGGCGTCTaGGCTCCTGCTGAACTGCAACACAGAAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: ELVLALLVRGGV*APAELQHRKQS
Trigger: GCTTTGCTTTCTGTGTTGCAGTTCAGCAGGAGCGCAGACGCCCCCGCGTACCAGCAGGGCCAGAACCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470379.1
ENST00000476733.5
CDS CAA 90 bp CTCCTCCTCAGCCCACTCAAGGCACACACTTGGCTGGTCCTTGCTTaGCTCCTGGATACCAAGCCCCAGGCACCACCCGAGCTTGAGACC +
Preference number: 6 (lower is better)
Translates to: LLLSPLKAHTWLVLA*LLDTKPQAPPELET
Trigger: GGTCTCAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 90 bp AGCCAGACACTGCCACCTCCTCCTCAGCCCACTCAAGGCACACACTaGGCTGGTCCTTGCTTTGCTCCTGGATACCAAGCCCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: SQTLPPPPQPTQGTH*AGPCFAPGYQAPGT
Trigger: GGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGTGGCAGTGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 72 bp GGCGGGGAGGCATCTCCTTCACAGAAGGCTGCCACCTaGAAGGGTCTCCTGCATGGCAACCCAGATCGACAA +
Preference number: 6 (lower is better)
Translates to: GGEASPSQKAAT*KGLLHGNPDRQ
Trigger: TTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAAGGAGATGCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 72 bp ATAATCTGGGCGTCTGCAGGTCTGGCCTTTGAGTGGTaGAATCCCCTGGCTGTTAGCGAGGGGGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: IIWASAGLAFEW*NPLAVSEGAGP
Trigger: AGGCCCTGCCCCCTCGCTAACAGCCAGGGGATTTCACCACTCAAAGGCCAGACCTGCAGACGCCCAGATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362089.10
ENST00000392122.3
ENST00000470379.1
ENST00000476733.5
ENST00000483825.5
ENST00000485089.5
CDS GCA 72 bp CAGGCCAAAGCTCTGTGCCTCTGTAATCGGCAACTGTaGCTGCAGGATGGCCGCGGTGAAAAGCGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: QAKALCLCNRQL*LQDGRGEKRLP
Trigger: TGGAAGGCGCTTTTCACCGCGGCCATCCTGCAGGCACAGTTGCCGATTACAGAGGCACAGAGCTTTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362089.10
ENST00000392122.3
ENST00000479979.1
ENST00000483825.5
CDS CCA 72 bp ACCTCCTCCTCAGCCCACTCAAGGCACACACTTGGCTaGTCCTTGCTTTGCTCCTGGATACCAAGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: TSSSAHSRHTLG*SLLCSWIPSPR
Trigger: CCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 72 bp TGCCACCTCCTCCTCAGCCCACTCAAGGCACACACTTaGCTGGTCCTTGCTTTGCTCCTGGATACCAAGCCC +
Preference number: 6 (lower is better)
Translates to: CHLLLSPLKAHT*LVLALLLDTKP
Trigger: GGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGAGTGGGCTGAGGAGGAGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 72 bp TGCTCCTGGATACCAAGCCCCAGGCACCACCCGAGCTaGAGACCTTCCAAGACCAAGGCCCCTCTGAACATC +
Preference number: 6 (lower is better)
Translates to: CSWIPSPRHHPS*RPSKTKAPLNI
Trigger: GATGTTCAGAGGGGCCTTGGTCTTGGAAGGTCTCAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 90 bp TGTGCCTGCAGGATGGCCGCGGTGAAAAGCGCCTTCCACTTCATCTaGTCCTTTCCCTCAGAAAGAGGCTGGGAGGCAGAGGCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: CACRMAAVKSAFHFI*SFPSERGWEAEAEA
Trigger: TGCCTCAGCCTCTGCCTCCCAGCCTCTTTCTGAGGGAAAGGACAAGATGAAGTGGAAGGCGCTTTTCACCGCGGCCATCCTGCAGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362089.10
ENST00000392122.3
ENST00000479979.1
ENST00000483825.5
CDS CAA 90 bp CATCGCCTTCCCTGGGACACTCTGATGTGCACACATTTGTACGGCTaGTCATGGAGGTGCCTAGCACCAGGCTCTCCCTCCTACCCTGTC +
Preference number: 6 (lower is better)
Translates to: HRLPWDTLMCTHLYG*SWRCLAPGSPSYPV
Trigger: GACAGGGTAGGAGGGAGAGCCTGGTGCTAGGCACCTCCATGACAAGCCGTACAAATGTGTGCACATCAGAGTGTCCCAGGGAAGGCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 72 bp CTCCTTCACAGAAGGCTGCCACCTGCAAGGGTCTCCTaGATGGCAACCCAGATCGACAATCAGGGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: LLHRRLPPARVS*MATQIDNQGSG
Trigger: CCCTGAACCCTGATTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 72 bp TCAAGGCACACACTTGGCTGGTCCTTGCTTTGCTCCTaGATACCAAGCCCCAGGCACCACCCGAGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: SRHTLGWSLLCS*IPSPRHHPSLR
Trigger: TCTCAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGACCAGCCAAGTGTGTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 72 bp CCCTGGGACACTCTGATGTGCACACATTTGTACGGCTaGTCATGGAGGTGCCTAGCACCAGGCTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: PWDTLMCTHLYG*SWRCLAPGSPS
Trigger: GGAGGGAGAGCCTGGTGCTAGGCACCTCCATGACAAGCCGTACAAATGTGTGCACATCAGAGTGTCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 90 bp TCCTTGCTTTGCTCCTGGATACCAAGCCCCAGGCACCACCCGAGCTaGAGACCTTCCAAGACCAAGGCCCCTCTGAACATCCATCAAGTG +
Preference number: 6 (lower is better)
Translates to: SLLCSWIPSPRHHPS*RPSKTKAPLNIHQV
Trigger: CACTTGATGGATGTTCAGAGGGGCCTTGGTCTTGGAAGGTCTCAAGCTCGGGTGGTGCCTGGGGCTTGGTATCCAGGAGCAAAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 90 bp AAAGCAGCAGGTTCCCCTACAACAGGAAGCTTCTTGATCCCCAAGTaGGCAGCAGTGGCAGACAGGGAGGGCTCCCACAATCAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: KAAGSPTTGSFLIPK*AAVADREGSHNQGS
Trigger: GGAGCCTTGATTGTGGGAGCCCTCCCTGTCTGCCACTGCTGCCAACTTGGGGATCAAGAAGCTTCCTGTTGTAGGGGAACCTGCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 72 bp TTCACAGAAGGCTGCCACCTGCAAGGGTCTCCTGCATaGCAACCCAGATCGACAATCAGGGTTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: FTEGCHLQGSPA*QPRSTIRVQGH
Trigger: GTGACCCTGAACCCTGATTGTCGATCTGGGTTGCCATGCAGGAGACCCTTGCAGGTGGCAGCCTTCTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CAA 72 bp CATCGCCTTCCCTGGGACACTCTGATGTGCACACATTaGTACGGCTTGTCATGGAGGTGCCTAGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: HRLPWDTLMCTH*YGLSWRCLAPG
Trigger: GCCTGGTGCTAGGCACCTCCATGACAAGCCGTACAAATGTGTGCACATCAGAGTGTCCCAGGGAAGGCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 90 bp CAACTAATGCAGAAAGCAGCAGGTTCCCCTACAACAGGAAGCTTCTaGATCCCCAAGTTGGCAGCAGTGGCAGACAGGGAGGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: QLMQKAAGSPTTGSF*IPKLAAVADREGSH
Trigger: GTGGGAGCCCTCCCTGTCTGCCACTGCTGCCAACTTGGGGATCAAGAAGCTTCCTGTTGTAGGGGAACCTGCTGCTTTCTGCATTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 72 bp AGAAAGCAGCAGGTTCCCCTACAACAGGAAGCTTCTTaGTCCCCAAGTTGGCAGCAGTGGCAGACAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RKQQVPLQQEAS*SPSWQQWQTGR
Trigger: CCTCCCTGTCTGCCACTGCTGCCAACTTGGGGATCAAGAAGCTTCCTGTTGTAGGGGAACCTGCTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS GCA 72 bp CACACCATGACCAGCCCCACGAAGAAATCCAGGGTCTaGAAGGCACCAAGTGAAAAACCCACGCTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: HTMTSPTKKSRV*KAPSEKPTLWS
Trigger: TGACCAGAGCGTGGGTTTTTCACTTGGTGCCTTGCAGACCCTGGATTTCTTCGTGGGGCTGGTCATGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 72 bp GACACTCTGATGTGCACACATTTGTACGGCTTGTCATaGAGGTGCCTAGCACCAGGCTCTCCCTCCTACCCT +
Preference number: 6 (lower is better)
Translates to: DTLMCTHLYGLS*RCLAPGSPSYP
Trigger: AGGGTAGGAGGGAGAGCCTGGTGCTAGGCACCTCCATGACAAGCCGTACAAATGTGTGCACATCAGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 72 bp AGGGTCTGCAAGGCACCAAGTGAAAAACCCACGCTCTaGTCAGCTCCCCAGTTACAGATGAGGAAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: RVCKAPSEKPTL*SAPQLQMRKGP
Trigger: AGGCCCTTTCCTCATCTGTAACTGGGGAGCTGACCAGAGCGTGGGTTTTTCACTTGGTGCCTTGCAGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS TCA 72 bp GAGTCTCCTCCGAGCTGCCAGCTCTTTGCACTGAGCTaGGGGGCTCAAGTTAGGCTCAAAAAGATAGGAGGT +
Preference number: 6 (lower is better)
Translates to: ESPPSCQLFALS*GAQVRLKKIGG
Trigger: ACCTCCTATCTTTTTGAGCCTAACTTGAGCCCCTCAGCTCAGTGCAAAGAGCTGGCAGCTCGGAGGAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS GCA 72 bp GGGAAGCTGACACAGCCTCACTCCTGCTTCACTTCATaGCGCTTCAGGCGGGAGAAACTGCAATGTCTTACA +
Preference number: 6 (lower is better)
Translates to: GKLTQPHSCFTS*RFRREKLQCLT
Trigger: TGTAAGACATTGCAGTTTCTCCCGCCTGAAGCGGCATGAAGTGAAGCAGGAGTGAGGCTGTGTCAGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CCA 72 bp GATAGGAGGTGGAGTTCTAGACAAAGACACGGAGACTaGGCAAAACAAGGGCTCACCTGGAGCCCCAGAATC +
Preference number: 6 (lower is better)
Translates to: DRRWSSRQRHGD*AKQGLTWSPRI
Trigger: GATTCTGGGGCTCCAGGTGAGCCCTTGTTTTGCCCAGTCTCCGTGTCTTTGTCTAGAACTCCACCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 72 bp CCTCCAGCCCTTCCTCCAACTTTCCAAGGTCAAATGTaGGGTCTCCTCTACTCACATTGTACAGGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: PPALPPTFQGQM*GLLYSHCTGLP
Trigger: AGGAAGGCCTGTACAATGTGAGTAGAGGAGACCTCACATTTGACCTTGGAAAGTTGGAGGAAGGGCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CAA 90 bp AAACAAGGGCTCACCTGGAGCCCCAGAATCATTTATCTGAGCAAGTaGTCTCTTTACACAGCCAAACGGGCTGTAGATCAACCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: KQGLTWSPRIIYLSK*SLYTAKRAVDQPSL
Trigger: GAGGGAGGGTTGATCTACAGCCCGTTTGGCTGTGTAAAGAGACAACTTGCTCAGATAAATGATTCTGGGGCTCCAGGTGAGCCCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 72 bp TTTACTCCTAAATTCTTCCAATCTCTGCCCACACCATaGCCAGCCCCACGAAGAAATCCAGGGTCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: FTPKFFQSLPTP*PAPRRNPGSAR
Trigger: CCTTGCAGACCCTGGATTTCTTCGTGGGGCTGGTCATGGTGTGGGCAGAGATTGGAAGAATTTAGGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 72 bp ACATGGCCTTCATTCACACTTGGAAAGAAGGACCTCTaGCTGAGTGTAAGCCCCTTTGTCACCAGTAGCATC +
Preference number: 6 (lower is better)
Translates to: TWPSFTLGKKDL*LSVSPFVTSSI
Trigger: GATGCTACTGGTGACAAAGGGGCTTACACTCAGGCAGAGGTCCTTCTTTCCAAGTGTGAATGAAGGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS GCA 72 bp ACTTTTCAGCTAAGGAGACTTTCTAGAAGCAGGTGCTaGTGCAGGCCGCAAGCAGGTGAGACATTACTCGAT +
Preference number: 6 (lower is better)
Translates to: TFQLRRLSRSRC*CRPQAGETLLD
Trigger: ATCGAGTAATGTCTCACCTGCTTGCGGCCTGCAGCAGCACCTGCTTCTAGAAAGTCTCCTTAGCTGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 72 bp CAAAGACACGGAGACTGGGCAAAACAAGGGCTCACCTaGAGCCCCAGAATCATTTATCTGAGCAAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: QRHGDWAKQGLT*SPRIIYLSKLS
Trigger: AGACAACTTGCTCAGATAAATGATTCTGGGGCTCCAGGTGAGCCCTTGTTTTGCCCAGTCTCCGTGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS CCA 72 bp TTCAAGAGAAAGGCTAACATGGCCTTCATTCACACTTaGAAAGAAGGACCTCTGCCTGAGTGTAAGCCCCTT +
Preference number: 6 (lower is better)
Translates to: FKRKANMAFIHT*KEGPLPECKPL
Trigger: AAGGGGCTTACACTCAGGCAGAGGTCCTTCTTTCCAAGTGTGAATGAAGGCCATGTTAGCCTTTCTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479979.1
CDS CAA 72 bp CTCACCTGGAGCCCCAGAATCATTTATCTGAGCAAGTaGTCTCTTTACACAGCCAAACGGGCTGTAGATCAA +
Preference number: 6 (lower is better)
Translates to: LTWSPRIIYLSK*SLYTAKRAVDQ
Trigger: TTGATCTACAGCCCGTTTGGCTGTGTAAAGAGACAACTTGCTCAGATAAATGATTCTGGGGCTCCAGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483825.5
CDS TCA 72 bp GTCCAAAATTCAAACAAGAAATGGGTTGAGAAGCACTaGAGTGATGACTGGGACTGGATTCTCCCCTTTACT +
Preference number: 6 (lower is better)
Translates to: VQNSNKKWVEKH*SDDWDWILPFT
Trigger: AGTAAAGGGGAGAATCCAGTCCCAGTCATCACTTCAGTGCTTCTCAACCCATTTCTTGTTTGAATTTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479979.1