RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD200 (Homo sapiens)

Ensembl gene IDs: ENSG00000091972

Ensembl transcript IDs: ENST00000315711.12, ENST00000383681.7, ENST00000473539.5, ENST00000478595.1, ENST00000498096.5, ENST00000606471.5, ENST00000607516.1, ENST00000607597.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAAGACCATGGGGGCTGGGCGGGCAGT +
Preference number: 1 (lower is better)
Translates to: GPIWVRQSHCTIFNP*PRDLPEDHGGWAGS
Trigger: ACTGCCCGCCCAGCCCCCATGGTCTTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR TCA 90 bp TCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACC +
Preference number: 1 (lower is better)
Translates to: SLIWRMLVTDVVPFG*DRVTVLFSIPDRGT
Trigger: GGTCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR TCA 90 bp GTAAATTATTTGGTCCAATTCCTTTATACTTTGGATGAGGTAAAGTaGCTAACAGAGGTCCCCACCAGTAGGAGCCCAAGTCAGTCTGTG +
Preference number: 1 (lower is better)
Translates to: VNYLVQFLYTLDEVK*LTEVPTSRSPSQSV
Trigger: CACAGACTGACTTGGGCTCCTACTGGTGGGGACCTCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGGAATTGGACCAAATAATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR CCA 90 bp TTTAGAACAAAGGGATTGTATGCTCATATTTGCCTCCTCTGCTATTaGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGC +
Preference number: 1 (lower is better)
Translates to: FRTKGLYAHICLLCY*EKLTHGKRSQQRQS
Trigger: GCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCCCTTTGTTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR GCA 90 bp AATATCTTTAGAACAAAGGGATTGTATGCTCATATTTGCCTCCTCTaGTATTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGA +
Preference number: 1 (lower is better)
Translates to: NIFRTKGLYAHICLL*YWEKLTHGKRSQQR
Trigger: TCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCCCTTTGTTCTAAAGATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR GCA 90 bp AGCTGGAACAATATCTTTAGAACAAAGGGATTGTATGCTCATATTTaGCTCCTCTGCTATTGGGAAAAGTTAACGCATGGAAAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: SWNNIFRTKGLYAHI*LLCYWEKLTHGKRS
Trigger: GCTTCTTTTTCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCCCTTTGTTCTAAAGATATTGTTCCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR GCA 90 bp AGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGATTCTTAGGCGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: SPQVQHLADHLLPHLILRRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...CCTAAGAATCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR-3UTR CCA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCCTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR-3UTR CCA 90 bp CAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: QYSKIEIRTRRITRETMLEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...AAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 2 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR CCA 90 bp CAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTCCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QYSKIEIRTRRITRETMLPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...AAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR CAA 90 bp AGGGCTCTCGGTCCTGATTCCGGTGACGTTTCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTAGCA +
Preference number: 2 (lower is better)
Translates to: RALGPDSGDVSSTVR*RLGREELPGKQCLA
Trigger: TGCTAAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAACGTCACCGGAATCAGGACCGAGAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTCCTTTATACTTTGGATaGGGTAAAGTGACTAACAGA +
Preference number: 2 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSPLYFG*GKVTNR
Trigger: TCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGG...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR TCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTA +
Preference number: 2 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTVVPFG*DRVTVL
Trigger: TAGTACAGTGACTCTGTCTCACCCAAATGGGACCAC...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR-3UTR GCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTCGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGACTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR CCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR TCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 2 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR TCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 2 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR GCA 90 bp CGTTTCCAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACACCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 2 (lower is better)
Translates to: RFQYSKIEIRTRRITRETPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...TGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGAATCACTTTCAGGGTaGTGTGTGACTTATTTAGGG +
Preference number: 2 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYESLSG*CVTYLG
Trigger: CCCTAAATAAGTCACACAGCACCCTGAAAGTGATTC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR CCA 90 bp CGTTTCCAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACATTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 2 (lower is better)
Translates to: RFQYSKIEIRTRRITRETLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...TGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR TCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCCTTTATACTTTGGATaGGGTAAAGTGACTAACAGA +
Preference number: 2 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYPLYFG*GKVTNR
Trigger: TCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATGGACTAGATACCAAATaGTGGGGAAACAGACTCATA +
Preference number: 2 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNGLDTK*WGNRLI
Trigger: TATGAGTCTGTTTCCCCATCATTTGGTATCTAGTCC...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGATTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 2 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR CAA 90 bp CAACATCATTCCACTAGCTGGAACAATATCTTTAGAACAAAGGGATaGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACG +
Preference number: 2 (lower is better)
Translates to: QHHSTSWNNIFRTKG*YAHICLLCYWEKLT
Trigger: CGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCCCTTTGTTCTAAAGATATTGTTCCAGCTAGTGGAATGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTCTCATAGAAGCACATaGAGAACAGCAGTGAAACCA +
Preference number: 2 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNSHRST*RTAVKP
Trigger: TGGTTTCACTGCTGTTCTTCATGTGCTTCTATGAGA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACATATTTGCCTCCTCTaGTATTGGGAAAAGTTAACG +
Preference number: 2 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRHICLL*YWEKLT
Trigger: CGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR TCA 72 bp TGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAAGACCATGGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: WVRQSHCTIFNP*PRDLPEDHGGW
Trigger: CCAGCCCCCATGGTCTTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR CAA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGCTCTTTCAGGTCCTTaGGAGAATGGCCCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSALSGP*ENGPFS
Trigger: GGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAGC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR TCA 72 bp TGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTATTTTCAATCCCTGAC +
Preference number: 3 (lower is better)
Translates to: WRMLVTDVVPFG*DRVTVLFSIPD
Trigger: GTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR CAA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGCTCTTTCAGGTCCTTaGGAGAATGGCCCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYALSGP*ENGPFS
Trigger: GGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAGC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR CCA 72 bp GATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGTACTATTTTCAATCCC +
Preference number: 3 (lower is better)
Translates to: DMEDAGNRRGPI*VRQSHCTIFNP
Trigger: GGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
3UTR-3UTR CAA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTGCTCTTTCAGGTCCTTaGGAGAATGGCCCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTALSGP*ENGPFS
Trigger: GGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAGC...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR TCA 72 bp TTGGTCCAATTCCTTTATACTTTGGATGAGGTAAAGTaGCTAACAGAGGTCCCCACCAGTAGGAGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: LVQFLYTLDEVK*LTEVPTSRSPS
Trigger: ACTTGGGCTCCTACTGGTGGGGACCTCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGGAATTGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
3UTR-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTTGCCTCCTCTGCTATaGGGAAAAGTTAACGCATGG +
Preference number: 3 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNLPPLL*GKVNAW
Trigger: CCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR CAA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAGACAAAGCATATGAATaGGCTGACTGCTATACAGGA +
Preference number: 3 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRDKAYE*ADCYTG
Trigger: TCCTGTATAGCAGTCAGCCAATTCATATGCTTTGTC...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATATTGTATGCTCATATTaGCCTCCTCTGCTATTGGGA +
Preference number: 3 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNIVCSY*PPLLLG
Trigger: TCCCAATAGCAGAGGAGGCAAATATGAGCATACAAT...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR-3UTR CAA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAATTGTATGCTCATATTaGCCTCCTCTGCTATTGGGA +
Preference number: 3 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRIVCSY*PPLLLG
Trigger: TCCCAATAGCAGAGGAGGCAAATATGAGCATACAAT...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR GCA 72 bp AATATCTTTAGAACAAAGGGATTGTATGCTCATATTTaGCTCCTCTGCTATTGGGAAAAGTTAACGCATGGA +
Preference number: 3 (lower is better)
Translates to: NIFRTKGLYAHI*LLCYWEKLTHG
Trigger: TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCCCTTTGTTCTAAAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp AGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGAGGCGCGCGCGAGGTaGCTGACTGCGGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: SRSQSPGAAPGRSPPSPPEARAR*LTADVR
Trigger: GCGCACATCCGCAGTCAGCCACCTCGCGCGCGCCTC...AGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR GCA 90 bp AGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGATTCTTAGGGAGGAGCGTCACCTGTaGCCCTGCCGCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPQVQHLADHLLPHLILREERHL*PCRTSR
Trigger: GCGGGAGGTGCGGCAGGGGCACAGGTGACGCTCCTC...CCTAAGAATCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CCA 90 bp GTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGCCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VGHSPQVQHLADHLLPHLPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...CAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp GTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGTGGATCACCACCCCATaGTTCTCGCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: VGHSPQVQHLADHLLPHLWITTP*FSLKVT
Trigger: GGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCA...CAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp CTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LKVGHSPQVQHLADHLLPPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...GGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp CTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCGCACCACTGCTGCCATaGCCCAAACCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LKVGHSPQVQHLADHLLPAPLLP*PKPGCR
Trigger: CCTACAGCCTGGTTTGGGTCATGGCAGCAGTGGTGC...GGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CCA 90 bp AAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGGATCACCACCCCATaGTTCTCGCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: KSVTVPRCSTWQITSFPTWITTP*FSLKVT
Trigger: GGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCA...GGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp TTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLKVGHSPQVQHLADHLLEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...AAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCGAGAGAAGGGCATCCTaGTCACCAGCCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITERRAS*SPASPS
Trigger: GGATGGAGAGGCTGGTGATCAGGATGCCCTTCTCTC...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR TCA 90 bp GTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTGCAGTGGCAGAGCAAGTaGTATTTAGGTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VGHSPQVQHLADHLLPHLQWQSK*YLGGLQ
Trigger: CTGAAGACCACCTAAATATCACTTGCTCTGCCACTG...CAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTCAGCCTCTCCATCCTTaGTCCTGGAGGCGCGCGCGA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSQPLHP*SWRRAR
Trigger: TCGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTG...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp CCAATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PIAFVDGLLKVGHSPQVQEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...CTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp ATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTCTGCGGATGTGCGCCTaGAGCTCTGCTAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: MEDAGNRRGPIWVRQSHCLRMCA*SSARQA
Trigger: CGCCTGCCTAGCAGAGCTCCAGGCGCACATCCGCAG...ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR TCA 90 bp AGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SRSQSPGAAPGRSPPSPPTIFNP*PRDLPE
Trigger: TTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGT...AGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp AGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTACAATGAGGGCTTCCTaGGCATTTTGCAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SRSQSPGAAPGRSPPSPPTMRAS*AFCREH
Trigger: ATGCTCTCTGCAAAATGCCCAGGAAGCCCTCATTGT...AGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACGCGCGCGAGGTGGCTaGCTGCGGATGTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLRARGG*LRMCAW
Trigger: CCAGGCGCACATCCGCAGTCAGCCACCTCGCGCGCG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITAGVYS*SLSSWV
Trigger: GACCCAGGATGAAAGAGAGCAGCTGTACACACCTGC...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp GAAGAATTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCCGCGCGCGAGGTGGCTaGCTGCGGATGTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: EELPGKQCLAIAELKTNSRARGG*LRMCAW
Trigger: CCAGGCGCACATCCGCAGTCAGCCACCTCGCGCGCG...GCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAATTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTATGGGCATAGACGGTaGGGCAGGCCGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSYGHRR*GRPFLR
Trigger: TCTCAGGAACGGCCTGCCTCACCGTCTATGCCCATA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGAGGCGCGCGCGAGGTaGCTGACTGCGGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYEARAR*LTADVR
Trigger: GCGCACATCCGCAGTCAGCCACCTCGCGCGCGCCTC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp ATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTCACCACTTGCACTTGTaGTGTGCACAGCACCACTGC +
Preference number: 4 (lower is better)
Translates to: MEDAGNRRGPIWVRQSHCHHLHL*CAQHHC
Trigger: GCAGTGGTGCTGTGCACAGCACAAGTGCAAGTGGTG...ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTGGATCACCACCCCATaGTTCTCGCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSWITTP*FSLKVT
Trigger: GGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCGCGCGCGAGGTGGCTaGCTGCGGATGTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNRARGG*LRMCAW
Trigger: CCAGGCGCACATCCGCAGTCAGCCACCTCGCGCGCG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTCCAGAAGGTGATGGTTaGGTTTTGGAGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSPEGDG*VLESQL
Trigger: CAGCTGGGACTCCAAAACTCAACCATCACCTTCTGG...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp AGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCTCCTTTATACTTTGGATaGGGTAAAGTGACTAACAGA +
Preference number: 4 (lower is better)
Translates to: SRSQSPGAAPGRSPPSPPPLYFG*GKVTNR
Trigger: TCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGG...AGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR TCA 90 bp CAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGTATGGGCATAGACGGTaGGGCAGGCCGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QTWSHLGETESLYYFQSLYGHRR*GRPFLR
Trigger: TCTCAGGAACGGCCTGCCTCACCGTCTATGCCCATA...CAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCGCGAGGTGGCTGACTaGGGATGTGCGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYREVAD*GCAPGA
Trigger: AGCTCCAGGCGCACATCCGCAGTCAGCCACCTCGCG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp CTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCGCTTCCTGGGCATTTTaGAGAGAGCATTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LKVGHSPQVQHLADHLLPASWAF*REHFKE
Trigger: TTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGC...GGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCCCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp CTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCTTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LKVGHSPQVQHLADHLLPLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...GGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp CTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCGAATCACTTTCAGGGTaGTGTGTGACTTATTTAGGG +
Preference number: 4 (lower is better)
Translates to: LKVGHSPQVQHLADHLLPESLSG*CVTYLG
Trigger: CCCTAAATAAGTCACACAGCACCCTGAAAGTGATTC...GGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGAAGACCATGGGGGCTaGGCGGGCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLEDHGG*AGSGRA
Trigger: TGCTCTGCCACTGCCCGCCCAGCCCCCATGGTCTTC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTGCACCACTGCTGCCATaGCCCAAACCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTAPLLP*PKPGCR
Trigger: CCTACAGCCTGGTTTGGGTCATGGCAGCAGTGGTGC...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR TCA 90 bp CCAATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGTCTGCCATGTCACAATaGGGGCTTCCTGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PIAFVDGLLKVGHSPQVQSAMSQ*GLPGHF
Trigger: AAAATGCCCAGGAAGCCCTCATTGTGACATGGCAGA...CTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp CCAATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTA +
Preference number: 4 (lower is better)
Translates to: PIAFVDGLLKVGHSPQVQVVPFG*DRVTVL
Trigger: TAGTACAGTGACTCTGTCTCACCCAAATGGGACCAC...CTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp GAAGAATTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCCGCGAGGTGGCTGACTaGGGATGTGCGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EELPGKQCLAIAELKTNSREVAD*GCAPGA
Trigger: AGCTCCAGGCGCACATCCGCAGTCAGCCACCTCGCG...GCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAATTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR GCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGCACAGCACCACTGCTaGCATGACCCAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWAQHHC*HDPNQA
Trigger: AGCCTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGC...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR GCA 90 bp TCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGATGTGCACAGCACCACTaGTGCCATGACCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: SHLGETESLYYFQSLTEGCAQHH*CHDPNQ
Trigger: CTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGCACA...TCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR GCA 90 bp CAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGCTTGCACTTGTGCTGTaGACAGCACCACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QTWSHLGETESLYYFQSLLALVL*TAPLLP
Trigger: TGGCAGCAGTGGTGCTGTGCACAGCACAAGTGCAAG...CAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGAGGCGCGCGCGAGGTaGCTGACTGCGGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNEARAR*LTADVR
Trigger: GCGCACATCCGCAGTCAGCCACCTCGCGCGCGCCTC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACTCCATCCTTGCTCCTaGAGGCGCGCGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRLHPCS*RRARGG
Trigger: GCCACCTCGCGCGCGCCTCCAGGAGCAAGGATGGAG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSRRGPI*VRQSHC
Trigger: ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCT...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGACCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGCCAGAAGGTGATGGTTaGGTTTTGGAGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLGSLIWRMLVTDVVPFGPEGDG*VLESQL
Trigger: CAGCTGGGACTCCAAAACTCAACCATCACCTTCTGG...CCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp TTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: FLGSLIWRMLVTDVVPFGEAGRS*DLPKTK
Trigger: TTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTC...CCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSTIFNP*PRDLPE
Trigger: TTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGT...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACAGCCTCTCCATCCTTaGTCCTGGAGGCGCGCGCGA +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRQPLHP*SWRRAR
Trigger: TCGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCTCCATCCTTGCTCCTaGAGGCGCGCGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNLHPCS*RRARGG
Trigger: GCCACCTCGCGCGCGCCTCCAGGAGCAAGGATGGAG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGTGATGGTTGAGTTTTaGAGTCCCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSVMVEF*SPSWVM
Trigger: CATTACCCAGCTGGGACTCCAAAACTCAACCATCAC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTCTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGAGAGAAGGGCATCCTaGTCACCAGCCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLERRAS*SPASPS
Trigger: GGATGGAGAGGCTGGTGATCAGGATGCCCTTCTCTC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315711.12
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCGCGAGGTGGCTGACTaGGGATGTGCGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNREVAD*GCAPGA
Trigger: AGCTCCAGGCGCACATCCGCAGTCAGCCACCTCGCG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGCACAGCACCACTGCTaGCATGACCCAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLAQHHC*HDPNQA
Trigger: AGCCTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGCACAGCACCACTGCTaGCATGACCCAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYAQHHC*HDPNQA
Trigger: AGCCTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWAGVYS*SLSSWV
Trigger: GACCCAGGATGAAAGAGAGCAGCTGTACACACCTGC...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp GATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTGAGACAGAGTCACCCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: DMEDAGNRRGPIWVRQSHPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...GTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTTGGATCACCACCCCATaGTTCTCGCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTWITTP*FSLKVT
Trigger: GGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCA...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGAAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SHLGETESLYYFQSLTEGRRGPI*VRQSHC
Trigger: ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCT...TCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACCCAGGTGCAGCACCTaGCAGATCACCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRPRCST*QITSFP
Trigger: GGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGTGCTCTCTTTCATCCTaGGTCACCACTTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWCSLSS*VTTCTA
Trigger: GGCTGTGCAAGTGGTGACCCAGGATGAAAGAGAGCA...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR TCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTCCAGAAGGTGATGGTTaGGTTTTGGAGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTPEGDG*VLESQL
Trigger: CAGCTGGGACTCCAAAACTCAACCATCACCTTCTGG...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTGCTGTACATAGACGGTaGGGCAGGCCGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTAVHRR*GRPFLR
Trigger: TCTCAGGAACGGCCTGCCTCACCGTCTATGTACAGC...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
CDS-3UTR TCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGGACTAGATACCAAATaGTGGGGAAACAGACTCATA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSGLDTK*WGNRLI
Trigger: TATGAGTCTGTTTCCCCATCATTTGGTATCTAGTCC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTGTGCACAGCACCACTaGTGCCATGACCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYCAQHH*CHDPNQ
Trigger: CTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGCACA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGACTTGCACTTGTGCTGTaGACAGCACCACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGLALVL*TAPLLP
Trigger: TGGCAGCAGTGGTGCTGTGCACAGCACAAGTGCAAG...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315711.12
CDS-3UTR GCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACACCACTTGCACTTGTaGTGTGCACAGCACCACTGC +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLHHLHL*CAQHHC
Trigger: GCAGTGGTGCTGTGCACAGCACAAGTGCAAGTGGTG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTAGVYS*SLSSWV
Trigger: GACCCAGGATGAAAGAGAGCAGCTGTACACACCTGC...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGCTTCCTGGGCATTTTaGAGAGAGCATTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSASWAF*REHFKE
Trigger: TTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp ATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACTTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: IAFVDGLLKVGHSPQVQHLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...GTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTCCTGGGTCACCACTTaGACAGCCTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYSWVTT*TASPSL
Trigger: CAAGGATGGAGAGGCTGTGCAAGTGGTGACCCAGGA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGAACAATGAGGGCTTCCTaGGCATTTTGCAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SHLGETESLYYFQSLTEGTMRAS*AFCREH
Trigger: ATGCTCTCTGCAAAATGCCCAGGAAGCCCTCATTGT...TCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTATGGATCACCACCCCATaGTTCTCGCTGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLWITTP*FSLKVT
Trigger: GGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCA...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTTTTGGAGTCCCAGCTaGGTAATGTTTATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSFWSPS*VMFILS
Trigger: GGACAAGATAAACATTACCCAGCTGGGACTCCAAAA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGGTGATGGTTGAGTTTTaGAGTCCCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: FLGSLIWRMLVTDVVPFGVMVEF*SPSWVM
Trigger: CATTACCCAGCTGGGACTCCAAAACTCAACCATCAC...CCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGCACCACTGCTGCCATaGCCCAAACCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNAPLLP*PKPGCR
Trigger: CCTACAGCCTGGTTTGGGTCATGGCAGCAGTGGTGC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLEAGRS*DLPKTK
Trigger: TTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATGCTGTACATAGACGGTaGGGCAGGCCGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNAVHRR*GRPFLR
Trigger: TCTCAGGAACGGCCTGCCTCACCGTCTATGTACAGC...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000383681.7
CDS-3UTR TCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGCAGTGGCAGAGCAAGTaGTATTTAGGTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWQWQSK*YLGGLQ
Trigger: CTGAAGACCACCTAAATATCACTTGCTCTGCCACTG...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp CAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: QTWSHLGETESLYYFQSLLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...CAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR GCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTCACCACTTGCACTTGTaGTGTGCACAGCACCACTGC +
Preference number: 4 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTHHLHL*CAQHHC
Trigger: GCAGTGGTGCTGTGCACAGCACAAGTGCAAGTGGTG...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CCA 90 bp GATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTGAGACAGAGTCACGGTGACCATGTTTTCTaGGCTTACAGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: DMEDAGNRRGPIWVRQSHGDHVF*AYSFLF
Trigger: AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACC...GTGACTCTGTCTCACCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp CCAATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGGGTGACCATGTTTTCTaGGCTTACAGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PIAFVDGLLKVGHSPQVQGDHVF*AYSFLF
Trigger: AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACC...CTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGTGATGGTTGAGTTTTaGAGTCCCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWVMVEF*SPSWVM
Trigger: CATTACCCAGCTGGGACTCCAAAACTCAACCATCAC...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTCTGCCATGTCACAATaGGGGCTTCCTGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYSAMSQ*GLPGHF
Trigger: AAAATGCCCAGGAAGCCCTCATTGTGACATGGCAGA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp GAAGAATTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: EELPGKQCLAIAELKTNSEAGRS*DLPKTK
Trigger: TTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTC...GCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp CAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTTCCTGGGTCACCACTTaGACTTGTGCTGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: QYSKIEIRTRRITRETMLSWVTT*TCAVHS
Trigger: GCTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGA...AAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR GCA 90 bp CAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGGCTTCCTGGGCATTTTaGAGAGAGCATTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: QTWSHLGETESLYYFQSLASWAF*REHFKE
Trigger: TTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGC...CAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR GCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTCCTGGGTCACCACTTaGACAGCCTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNSWVTT*TASPSL
Trigger: CAAGGATGGAGAGGCTGTGCAAGTGGTGACCCAGGA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp CAGACGTGGTCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGTTTTGGAGTCCCAGCTaGGTAATGTTTATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QTWSHLGETESLYYFQSLFWSPS*VMFILS
Trigger: GGACAAGATAAACATTACCCAGCTGGGACTCCAAAA...CAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp TCCCATTTGGGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGATTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: SHLGETESLYYFQSLTEGLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...TCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACCCAAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTCTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTCAGTCCTATTTGTGTTaGAGTAAATCTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSQSYLC*SKSHRS
Trigger: GCTTCTATGAGATTTACTCCAACACAAATAGGACTG...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGGCCCCCAATTGTCCTaGTCAGAGTCAGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQGPQLS*SESASP
Trigger: TGGAGAGGCTGACTCTGACCAGGACAATTGGGGGCC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473539.5
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACAGTGGCAGAGCAAGTaGTATTTAGGTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLQWQSK*YLGGLQ
Trigger: CTGAAGACCACCTAAATATCACTTGCTCTGCCACTG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGACAGTGGCAGAGCAAGTaGTATTTAGGTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGQWQSK*YLGGLQ
Trigger: CTGAAGACCACCTAAATATCACTTGCTCTGCCACTG...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLTIFNP*PRDLPE
Trigger: TTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGT...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGTGCACAGCACCACTaGTGCCATGACCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQCAQHH*CHDPNQ
Trigger: CTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGCACA...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAACTTGCACTTGTGCTGTaGACAGCACCACTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQLALVL*TAPLLP
Trigger: TGGCAGCAGTGGTGCTGTGCACAGCACAAGTGCAAG...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTCCTGGGTCACCACTTaGACTTGTGCTGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNSWVTT*TCAVHS
Trigger: GCTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTATGCTCTCTTTCATCCTaGGTCACCACTTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLCSLSS*VTTCTC
Trigger: ACAAGTGCAAGTGGTGACCCAGGATGAAAGAGAGCA...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACACAATGAGGGCTTCCTaGGCATTTTGCAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYTMRAS*AFCREH
Trigger: ATGCTCTCTGCAAAATGCCCAGGAAGCCCTCATTGT...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTACTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp ATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGCAGTAAGCAGGAACTaGACTAGATACCAAATGATG +
Preference number: 4 (lower is better)
Translates to: ILRVFDMEDAGNRRGPIWAVSRN*TRYQMM
Trigger: CATCATTTGGTATCTAGTCCAGTTCCTGCTTACTGC...CCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTTGCCTCCTCTGCTATTaGGAAAAGTTAACGCATGGA +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTCLLCY*EKLTHG
Trigger: TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCA...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ATAGCCTTTGTTGACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCATCATTCCACTAGCTaGAACAATATCTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: IAFVDGLLKVGHSPQVQHHHSTS*NNIFRT
Trigger: TGTTCTAAAGATATTGTTCCAGCTAGTGGAATGATG...GTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
3UTR CAA 72 bp GGTCCTGATTCCGGTGACGTTTCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAATTACCAGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: GPDSGDVSSTVR*RLGREELPGKQ
Trigger: TTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAACGTCACCGGAATCAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTCTGCCATGTCACAATaGGGGCTTCCTGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNSAMSQ*GLPGHF
Trigger: AAAATGCCCAGGAAGCCCTCATTGTGACATGGCAGA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQEAGRS*DLPKTK
Trigger: TTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp CAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTA +
Preference number: 4 (lower is better)
Translates to: QYSKIEIRTRRITRETMLVVPFG*DRVTVL
Trigger: TAGTACAGTGACTCTGTCTCACCCAAATGGGACCAC...AAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR TCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTATCACCTGGTAATCATTaGTGGTGGTCTTTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLSPGNH*WWSFLG
Trigger: TCCTAGGAAAGACCACCATCAATGATTACCAGGTGA...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473539.5
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNAGVYS*SLSSWV
Trigger: GACCCAGGATGAAAGAGAGCAGCTGTACACACCTGC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTGAATCACTTTCAGGGTaGTGTGTGACTTATTTAGGG +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTESLSG*CVTYLG
Trigger: CCCTAAATAAGTCACACAGCACCCTGAAAGTGATTC...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATCGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp GAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAAGATATGAATTGGCTGACTaGTATACAGGAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: ETESLYYFQSLTEGPSRRYELAD*YTGNLL
Trigger: TAGGAGATTTCCTGTATAGCAGTCAGCCAATTCATA...TCTTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CCA 90 bp CGTTTCCAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACATGCTCTCTTTCATCCTaGGTCACCACTTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: RFQYSKIEIRTRRITRETCSLSS*VTTCTC
Trigger: ACAAGTGCAAGTGGTGACCCAGGATGAAAGAGAGCA...TGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CCA 90 bp GTTTCCAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAAAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: VSSTVRLRLGREELPGKQRRGPI*VRQSHC
Trigger: ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCT...TTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGATGCCTCCTCTGCTATTaGGAAAAGTTAACGCATGGA +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGCLLCY*EKLTHG
Trigger: TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCA...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTGCCTCCTCTGCTATTaGGAAAAGTTAACGCATGGA +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYCLLCY*EKLTHG
Trigger: TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTGCTCTCTTTCATCCTaGGTCACCACTTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNCSLSS*VTTCTA
Trigger: GGCTGTGCAAGTGGTGACCCAGGATGAAAGAGAGCA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
3UTR CAA 72 bp CTAAGTCCAGTGCCCTTTCAACCACATAACATGGCATaGCTTTACAAAATCAAGTCCTACAACAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: LSPVPFQPHNMA*LYKIKSYNRPE
Trigger: CTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCTGCCATGTCACAATaGGGGCTTCCTGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQSAMSQ*GLPGHF
Trigger: AAAATGCCCAGGAAGCCCTCATTGTGACATGGCAGA...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNTIFNP*PRDLPE
Trigger: TTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGT...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAACTATTTTCAATCCCTaGCCGAGGGACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRTIFNP*PRDLPE
Trigger: TTCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGT...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQVVPFG*DRVTVL
Trigger: TAGTACAGTGACTCTGTCTCACCCAAATGGGACCAC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGTGGTCCCATTTGGGTaGGACAGAGTCACTGTACTA +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNVVPFG*DRVTVL
Trigger: TAGTACAGTGACTCTGTCTCACCCAAATGGGACCAC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGGACTAGATACCAAATaGTGGGGAAACAGACTCATA +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYGLDTK*WGNRLI
Trigger: TATGAGTCTGTTTCCCCATCATTTGGTATCTAGTCC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGATCTCATAGAAGCACATaGAGAACAGCAGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGSHRST*RTAVKP
Trigger: TGGTTTCACTGCTGTTCTTCATGTGCTTCTATGAGA...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACTCTCATAGAAGCACATaGAGAACAGCAGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYSHRST*RTAVKP
Trigger: TGGTTTCACTGCTGTTCTTCATGTGCTTCTATGAGA...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGCTTCCTGGGCATTTTaGAGAGAGCATTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLASWAF*REHFKE
Trigger: TTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGAATCACTTTCAGGGTaGTGTGTGACTTATTTAGGG +
Preference number: 4 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLESLSG*CVTYLG
Trigger: CCCTAAATAAGTCACACAGCACCCTGAAAGTGATTC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAACGCTCCCACCTCTTTTaGTCTTTCAGGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQRSHLF*SFRSFG
Trigger: TCCAAAGGACCTGAAAGAGCAAAAGAGGTGGGAGCG...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTTTGTATGCTCATATTTaGCTCCTCTGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTLYAHI*LLCYWE
Trigger: TTCCCAATAGCAGAGGAGGCAAATATGAGCATACAA...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGATTTTGGAGTCCCAGCTaGGTAATGTTTATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGFWSPS*VMFILS
Trigger: GGACAAGATAAACATTACCCAGCTGGGACTCCAAAA...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAGTGATGGTTGAGTTTTaGAGTCCCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRVMVEF*SPSWVM
Trigger: CATTACCCAGCTGGGACTCCAAAACTCAACCATCAC...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNRRGPI*VRQSHC
Trigger: ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCT...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAAGACGTGGTCCCATTTaGGTGAGACAGAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQRRGPI*VRQSHC
Trigger: ACAGTGACTCTGTCTCACCCAAATGGGACCACGTCT...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGATTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGAGCAGTAAGCAGGAACTaGACTAGATACCAAATGATG +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGAVSRN*TRYQMM
Trigger: CATCATTTGGTATCTAGTCCAGTTCCTGCTTACTGC...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCAGTGGCAGAGCAAGTaGTATTTAGGTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNQWQSK*YLGGLQ
Trigger: CTGAAGACCACCTAAATATCACTTGCTCTGCCACTG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTGCTCTCTTTCATCCTaGGTCACCACTTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNCSLSS*VTTCTC
Trigger: ACAAGTGCAAGTGGTGACCCAGGATGAAAGAGAGCA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATACAATGAGGGCTTCCTaGGCATTTTGCAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNTMRAS*AFCREH
Trigger: ATGCTCTCTGCAAAATGCCCAGGAAGCCCTCATTGT...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTTTTTGGAGTCCCAGCTaGGTAATGTTTATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTFWSPS*VMFILS
Trigger: GGACAAGATAAACATTACCCAGCTGGGACTCCAAAA...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGTGATGGTTGAGTTTTaGAGTCCCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQVMVEF*SPSWVM
Trigger: CATTACCCAGCTGGGACTCCAAAACTCAACCATCAC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCTCTTTCAGGTCCTTTaGAGAATGGCCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNLFQVL*RMAPFP
Trigger: AGGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTTGGGATTCAAACACTaGGTAGCTCAGATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNLGFKH*VAQMAV
Trigger: TACTGCCATCTGAGCTACTCAGTGTTTGAATCCCAA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR TCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTCTCATAGAAGCACATaGAGAACAGCAGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNSHRST*RTAVKP
Trigger: TGGTTTCACTGCTGTTCTTCATGTGCTTCTATGAGA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAACCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCCTTTGTTGACGGTTTaGTTAAAGTCGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNPLLTV*LKSVTV
Trigger: GACTGTGACCGACTTTAAGCAAACCGTCAACAAAGG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp GGATTGTATGCTCATATTTGCCTCCTCTGCTATTGGGAAAAGTTAACGCATGGATATGAATTGGCTGACTaGTATACAGGAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: GLYAHICLLCYWEKLTHGYELAD*YTGNLL
Trigger: TAGGAGATTTCCTGTATAGCAGTCAGCCAATTCATA...TCCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAAATATGAGCATACAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATTTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAGCAGTAAGCAGGAACTaGACTAGATACCAAATGATG +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRAVSRN*TRYQMM
Trigger: CATCATTTGGTATCTAGTCCAGTTCCTGCTTACTGC...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTCATCATTCCACTAGCTaGAACAATATCTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTHHSTS*NNIFRT
Trigger: TGTTCTAAAGATATTGTTCCAGCTAGTGGAATGATG...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
3UTR CAA 72 bp ATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATaGGCTGACTGCTATACAGGAAATCTCCTAAACATC +
Preference number: 4 (lower is better)
Translates to: MEKEASRDKAYE*ADCYTGNLLNI
Trigger: GATGTTTAGGAGATTTCCTGTATAGCAGTCAGCCAATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGCTTCCTGGGCATTTTaGAGAGAGCATTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNASWAF*REHFKE
Trigger: TTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTTACCAGGGAAACAATaGTTAGCAATAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNLPGKQ*LAIAEL
Trigger: CAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGATTGTATGCTCATATTTaGCTCCTCTGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRLYAHI*LLCYWE
Trigger: TTCCCAATAGCAGAGGAGGCAAATATGAGCATACAA...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAGGTGACCATGTTTTCTaGGCTTACAGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRGDHVF*AYSFLF
Trigger: AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACC...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATGGTGACCATGTTTTCTaGGCTTACAGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNGDHVF*AYSFLF
Trigger: AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACC...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTTTGGAGTCCCAGCTaGGTAATGTTTATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQFWSPS*VMFILS
Trigger: GGACAAGATAAACATTACCCAGCTGGGACTCCAAAA...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTAGGGTCTTTGATATaGAGGATGCTGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQLGSLI*RMLVTD
Trigger: GTCTGTTACCAGCATCCTCCATATCAAAGACCCTAA...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTCAGTCCTATTTGTGTTaGAGTAAATCTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTQSYLC*SKSHRS
Trigger: GCTTCTATGAGATTTACTCCAACACAAATAGGACTG...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCATCATTCCACTAGCTaGAACAATATCTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYHHSTS*NNIFRT
Trigger: TGTTCTAAAGATATTGTTCCAGCTAGTGGAATGATG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR GCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTGTATGCTCATATTTaGCTCCTCTGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQLYAHI*LLCYWE
Trigger: TTCCCAATAGCAGAGGAGGCAAATATGAGCATACAA...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGGTGACCATGTTTTCTaGGCTTACAGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQGDHVF*AYSFLF
Trigger: AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CCA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGACAGTCCTATTTGTGTTaGAGTAAATCTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRQSYLC*SKSHRS
Trigger: GCTTCTATGAGATTTACTCCAACACAAATAGGACTG...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR TCA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAACCTTTATACTTTGGATaGGGTAAAGTGACTAACAGA +
Preference number: 4 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQPLYFG*GKVTNR
Trigger: TCTGTTAGTCACTTTACCTCATCCAAAGTATAAAGG...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR GCA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATTATGAATTGGCTGACTaGTATACAGGAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNYELAD*YTGNLL
Trigger: TAGGAGATTTCCTGTATAGCAGTCAGCCAATTCATA...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp AAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTCCCCACCGGTCACCACTTGCACTaGTGCTGTGCACAGCACCAC +
Preference number: 5 (lower is better)
Translates to: KSVTVPRCSTWQITSFPTGHHLH*CCAQHH
Trigger: GTGGTGCTGTGCACAGCACAAGTGCAAGTGGTGACC...GGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS TCA 90 bp AGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTGGTTGTGTGTGTTaGGCACCAGAGCTGTCATGGTCAGCCTCTCCATCCTTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SSLGANLYPGGGCVC*APELSWSASPSLLL
Trigger: CAGGAGCAAGGATGGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS GCA 90 bp ATCCTGGGTCACCACTTGCACTTGTGCTGTGCACAGCACCACTGCTaGCATGACCCAAACCAGGCTGTAGGTAGACAGATGAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: ILGHHLHLCCAQHHC*HDPNQAVGRQMREG
Trigger: CCCTTCTCTCATCTGTCTACCTACAGCCTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000473539.5
ENST00000498096.5
ENST00000607597.1
CDS-3UTR CAA 90 bp TTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCTTATCCTGGGTCACCACTaGCACTTGTGCTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LLKVGHSPQVQHLADHLLILGHH*HLCCAQ
Trigger: CTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGAT...AAGGAGGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS CCA 90 bp CCAATATTGTCTCAGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTaGTTGTGTGTGTTGAGCACCAGAGCTGTCATGGTCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PILSQLSWGQLVPWR*LCVLSTRAVMVSLS
Trigger: GGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTGAGACAATATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS-3UTR CAA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCCAGCCTCTCCATCCTaGCTCCTGGAGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYPASPS*LLEARA
Trigger: CGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTGG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315711.12
CDS-3UTR CAA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTGGTCACCACTTGCACTaGTGCTGTGCACAGCACCAC +
Preference number: 5 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSGHHLH*CCAQHH
Trigger: GTGGTGCTGTGCACAGCACAAGTGCAAGTGGTGACC...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CAA 90 bp TTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCCTTTGTCCAGCCTCTCCATCCTaGCTCCTGGAGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: LPGKQCLAIAELKTNSLCPASPS*LLEARA
Trigger: CGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTGG...ACAAAGGCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498096.5
CDS-3UTR CAA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCGCCTTTGTTGACGGTTaGCTTAAAGTCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITAFVDG*LKVGHS
Trigger: ACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGC...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CAA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTATCAGCCTCTCCATCCTaGCTCCTGGAGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLSASPS*LLEARA
Trigger: CGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTGA...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473539.5
CDS CCA 90 bp TTAGAGCCAATATTGTCTCAGCTCTCTTGGGGCCAACTTGTACCCTaGAGGTGGTTGTGTGTGTTGAGCACCAGAGCTGTCATGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LEPILSQLSWGQLVP*RWLCVLSTRAVMVS
Trigger: GCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTGAGACAATATTGGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS-3UTR CAA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTACAGCCTCTCCATCCTaGCTCCTGGAGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTTASPS*LLEARA
Trigger: CGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTGT...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS GCA 90 bp TGGGCATTTTGCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTCACCACTTGCACAGCCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: WAFCREHFKEAGVYS*SLSSWVTTCTASPS
Trigger: GGATGGAGAGGCTGTGCAAGTGGTGACCCAGGATGAAAGAGAGCAGCTGTACACACCTGCTTCCTTAAAATGCTCTCTGCAAAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS GCA 90 bp TGGGCATTTTGCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTaGTCTCTTTCATCCTGGGTCACCACTTGCACTTGTGCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: WAFCREHFKEAGVYS*SLSSWVTTCTCAVH
Trigger: GTGCACAGCACAAGTGCAAGTGGTGACCCAGGATGAAAGAGAGCAGCTGTACACACCTGCTTCCTTAAAATGCTCTCTGCAAAATGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000473539.5
ENST00000498096.5
ENST00000607597.1
CDS-3UTR CAA 90 bp ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: TVCLKSVTVPRCSTWQITSSTVR*RLGREE
Trigger: TTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGA...GGTGATCTGCCAGGTGCTGCACCTGGGGACTGTGACCGACTTTAAGCAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CAA 90 bp TTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCATTTGGGGCTCTTTCAGGTCCTTaGGAGAATGGCCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: FLGSLIWRMLVTDVVPFGALSGP*ENGPFS
Trigger: GGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAGC...CCCAAATGGGACCACGTCTGTTACCAGCATCCTCCATATCAAAGACCCTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CAA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTTGCCTCCTCTGCTATaGGGAAAAGTTAACGCATGG +
Preference number: 5 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSLPPLL*GKVNAW
Trigger: CCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATACAGCCTCTCCATCCTaGCTCCTGGAGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNTASPS*LLEARA
Trigger: CGCGCGCGCCTCCAGGAGCAAGGATGGAGAGGCTGT...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGGTCACCACTTGCACTaGTGCTGTGCACAGCACCAC +
Preference number: 5 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLGHHLH*CCAQHH
Trigger: GTGGTGCTGTGCACAGCACAAGTGCAAGTGGTGACC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CAA 90 bp GGTGAGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGATTGCCTCCTCTGCTATaGGGAAAAGTTAACGCATGG +
Preference number: 5 (lower is better)
Translates to: GETESLYYFQSLTEGPSRLPPLL*GKVNAW
Trigger: CCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAA...TCTGGAAGGTCCCTCGGTCAGGGATTGAAAATAGTACAGTGACTCTGTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478595.1
CDS-3UTR CAA 90 bp AGTCCTACAACAGACCTGAGAGGTAAACTGACTTCCTCTTGGGATTCAAACACTATCCTGGGTCACCACTaGCACAGCCTCTCCATCCTT +
Preference number: 5 (lower is better)
Translates to: SPTTDLRGKLTSSWDSNTILGHH*HSLSIL
Trigger: AAGGATGGAGAGGCTGTGCAAGTGGTGACCCAGGAT...AGTGTTTGAATCCCAAGAGGAAGTCAGTTTACCTCTCAGGTCTGTTGTAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACCAGACGTGGTCCCATTaGGGTGAGACAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYQTWSH*GETESL
Trigger: CAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATGGAGAGGGCCCCCAATaGTCCTGGTCAGAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNGEGPQ*SWSESA
Trigger: GGCTGACTCTGACCAGGACAATTGGGGGCCCTCTCC...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473539.5
CDS TCA 90 bp AAGGGATACTATGGGCTGTACATAGACGGTGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAAGGTATTGAAGAGACACATGTAACA +
Preference number: 5 (lower is better)
Translates to: KGYYGLYIDGEAGRS*DLPKTKGIEETHVT
Trigger: TGTTACATGTGTCTCTTCAATACCTTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTCACCGTCTATGTACAGCCCATAGTATCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000606471.5
CDS-3UTR CAA 90 bp GAAGAATTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCCAGACGTGGTCCCATTaGGGTGAGACAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: EELPGKQCLAIAELKTNSQTWSH*GETESL
Trigger: CAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG...GCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CAA 90 bp GCTCAGATGGCAGTAAAAAGTCGTGGGATCCTTAAGGCTTTCGCTCCCACCTCTTCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: AQMAVKSRGILKAFAPTSSSTVR*RLGREE
Trigger: TTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGA...AGAGGTGGGAGCGAAAGCCTTAAGGATCCCACGACTTTTTACTGCCATCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATATCCTGGGTCACCACTaGCACTTGTGCTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNILGHH*HLCCAQ
Trigger: CTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGAT...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315711.12
CDS-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATCAGACGTGGTCCCATTaGGGTGAGACAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNQTWSH*GETESL
Trigger: CAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATATCCTGGGTCACCACTaGCACAGCCTCTCCATCCTT +
Preference number: 5 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNILGHH*HSLSIL
Trigger: AAGGATGGAGAGGCTGTGCAAGTGGTGACCCAGGAT...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS TCA 90 bp GTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTaGGTTTTGGAGTCCCAGCTGGGTAATGTTTATCTTGTCCTTATA +
Preference number: 5 (lower is better)
Translates to: VTPFILQGDIPEGDG*VLESQLGNVYLVLI
Trigger: TATAAGGACAAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACCATCACCTTCTGGAATATCACCCTGGAGGATGAAGGGTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
ENST00000498096.5
ENST00000606471.5
CDS-3UTR CAA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATATCCTGGGTCACCACTaGCACTTGTGCTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNILGHH*HLCCAQ
Trigger: CTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGAT...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315711.12
ENST00000473539.5
CDS-3UTR CAA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATCAGACGTGGTCCCATTaGGGTGAGACAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNQTWSH*GETESL
Trigger: CAGTGACTCTGTCTCACCCAAATGGGACCACGTCTG...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp CCAGTGCCCTTTCAACCACATAACATGGCATTGCTTTACAAAATCAAGTCCTACGCCTTTGTTGACGGTTaGCTTAAAGTCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: PVPFQPHNMALLYKIKSYAFVDG*LKVGHS
Trigger: ACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGC...GTAGGACTTGATTTTGTAAAGCAATGCCATGTTATGTGGTTGAAAGGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTGCCTTTGTTGACGGTTaGCTTAAAGTCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTAFVDG*LKVGHS
Trigger: ACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGC...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp TTACCAGGGAAACAATGCTTAGCAATAGCGGAACTGAAAACCAATAGCCTTTGTGCCTTTGTTGACGGTTaGCTTAAAGTCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: LPGKQCLAIAELKTNSLCAFVDG*LKVGHS
Trigger: ACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGC...ACAAAGGCTATTGGTTTTCAGTTCCGCTATTGCTAAGCATTGTTTCCCTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CAA 90 bp AACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAAGCTCTTTCAGGTCCTTaGGAGAATGGCCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NRKAKGKLSVFFLLSLFQALSGP*ENGPFS
Trigger: GGAAAAGGGGCCATTCTCCAAAGGACCTGAAAGAGC...TTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGAGCCTTTGTTGACGGTTaGCTTAAAGTCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRAFVDG*LKVGHS
Trigger: ACTGTGACCGACTTTAAGCAAACCGTCAACAAAGGC...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTAGACAAAGCATATGAATaGGCTGACTGCTATACAGGA +
Preference number: 5 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLDKAYE*ADCYTG
Trigger: TCCTGTATAGCAGTCAGCCAATTCATATGCTTTGTC...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGATTGCCTCCTCTGCTATaGGGAAAAGTTAACGCATGG +
Preference number: 5 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRLPPLL*GKVNAW
Trigger: CCATGCGTTAACTTTTCCCAATAGCAGAGGAGGCAA...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGTGTCAAATTCAAGTAGACCAGGGAATCACTTTCAGGGTGCTGTGTGACTTATCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LCQIQVDQGITFRVLCDLSSTVR*RLGREE
Trigger: TTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGA...TAAGTCACACAGCACCCTGAAAGTGATTCCCTGGTCTACTTGAATTTGACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
CDS-3UTR CAA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTGACAAAGCATATGAATaGGCTGACTGCTATACAGGA +
Preference number: 5 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTDKAYE*ADCYTG
Trigger: TCCTGTATAGCAGTCAGCCAATTCATATGCTTTGTC...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TGGCATTGCTTTACAAAATCAAGTCCTACAACAGACCTGAGAGGTAAACTGACTATTGTATGCTCATATTaGCCTCCTCTGCTATTGGGA +
Preference number: 5 (lower is better)
Translates to: WHCFTKSSPTTDLRGKLTIVCSY*PPLLLG
Trigger: TCCCAATAGCAGAGGAGGCAAATATGAGCATACAAT...AGTCAGTTTACCTCTCAGGTCTGTTGTAGGACTTGATTTTGTAAAGCAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTGGGAAAAGTTAACGCATGGAAAAAGAAGCCAGCAGAGACAAAGCATATGAATGACAAAGCATATGAATaGGCTGACTGCTATACAGGA +
Preference number: 5 (lower is better)
Translates to: LGKVNAWKKKPAETKHMNDKAYE*ADCYTG
Trigger: TCCTGTATAGCAGTCAGCCAATTCATATGCTTTGTC...ATTCATATGCTTTGTCTCTGCTGGCTTCTTTTTCCATGCGTTAACTTTTCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp TTAACAGCGAAAACAACTTACACTTTAATTCCTAGGCCACTGGATAGACACAGATCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LTAKTTYTLIPRPLDRHRSSTVR*RLGREE
Trigger: TTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGA...TCTGTGTCTATCCAGTGGCCTAGGAATTAAAGTGTAAGTTGTTTTCGCTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS-3UTR CAA 90 bp CAGTACAGTAAGATTGAGATTAGGACGAGAAGAATTACCAGGGAAACAATGCTTTCCAGTACAGTAAGATaGAGATTAGGACGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: QYSKIEIRTRRITRETMLSSTVR*RLGREE
Trigger: TTCTTCTCGTCCTAATCTCAATCTTACTGTACTGGA...AAGCATTGTTTCCCTGGTAATTCTTCTCGTCCTAATCTCAATCTTACTGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS-3UTR CAA 90 bp ACAGAAAGGCAAAAGGTAAGCTCTCTGTATTCTTTCTTCTCTCTCTCTTTCAATATTGTATGCTCATATTaGCCTCCTCTGCTATTGGGA +
Preference number: 5 (lower is better)
Translates to: TERQKVSSLYSFFSLSFNIVCSY*PPLLLG
Trigger: TCCCAATAGCAGAGGAGGCAAATATGAGCATACAAT...ATTGAAAGAGAGAGAGAAGAAAGAATACAGAGAGCTTACCTTTTGCCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000478595.1
CDS TCA 72 bp GGGGCCAACTTGTACCCTGGAGGTGGTTGTGTGTGTTaGGCACCAGAGCTGTCATGGTCAGCCTCTCCATCC +
Preference number: 6 (lower is better)
Translates to: GANLYPGGGCVC*APELSWSASPS
Trigger: GGATGGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS CAA 90 bp CAGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTGGTTGTGTGTGTaGAGCACCAGAGCTGTCATGGTCAGCCTCTCCATCCTTGCTCCT +
Preference number: 6 (lower is better)
Translates to: QLSWGQLVPWRWLCV*STRAVMVSLSILAP
Trigger: AGGAGCAAGGATGGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS CAA 72 bp TGGGGCCAACTTGTACCCTGGAGGTGGTTGTGTGTGTaGAGCACCAGAGCTGTCATGGTCAGCCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: WGQLVPWRWLCV*STRAVMVSLSI
Trigger: GATGGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS CAA 72 bp CAGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTGGTaGTGTGTGTTGAGCACCAGAGCTGTCATGGTCAGC +
Preference number: 6 (lower is better)
Translates to: QLSWGQLVPWRW*CVLSTRAVMVS
Trigger: GCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS GCA 72 bp CACCACTTGCACTTGTGCTGTGCACAGCACCACTGCTaGCATGACCCAAACCAGGCTGTAGGTAGACAGATG +
Preference number: 6 (lower is better)
Translates to: HHLHLCCAQHHC*HDPNQAVGRQM
Trigger: CATCTGTCTACCTACAGCCTGGTTTGGGTCATGGCAGCAGTGGTGCTGTGCACAGCACAAGTGCAAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000473539.5
ENST00000498096.5
ENST00000607597.1
CDS CCA 72 bp TCTCAGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTaGTTGTGTGTGTTGAGCACCAGAGCTGTCATGGTC +
Preference number: 6 (lower is better)
Translates to: SQLSWGQLVPWR*LCVLSTRAVMV
Trigger: GACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS CCA 72 bp AAGGAAGCAGGTGTGTACAGCTGCTCTCTTTCATCCTaGGTCACCACTTGCACTTGTGCTGTGCACAGCACC +
Preference number: 6 (lower is better)
Translates to: KEAGVYSCSLSS*VTTCTCAVHST
Trigger: GGTGCTGTGCACAGCACAAGTGCAAGTGGTGACCCAGGATGAAAGAGAGCAGCTGTACACACCTGCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000473539.5
ENST00000498096.5
ENST00000607597.1
CDS CCA 72 bp AAGGAAGCAGGTGTGTACAGCTGCTCTCTTTCATCCTaGGTCACCACTTGCACAGCCTCTCCATCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: KEAGVYSCSLSS*VTTCTASPSLL
Trigger: GAGCAAGGATGGAGAGGCTGTGCAAGTGGTGACCCAGGATGAAAGAGAGCAGCTGTACACACCTGCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383681.7
ENST00000478595.1
CDS CAA 90 bp ATATTGTCTCAGCTCTCTTGGGGCCAACTTGTACCCTGGAGGTGGTaGTGTGTGTTGAGCACCAGAGCTGTCATGGTCAGCCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: ILSQLSWGQLVPWRW*CVLSTRAVMVSLSI
Trigger: GATGGAGAGGCTGACCATGACAGCTCTGGTGCTCAACACACACAACCACCTCCAGGGTACAAGTTGGCCCCAAGAGAGCTGAGACAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607516.1
CDS TCA 72 bp TATGGGCTGTACATAGACGGTGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAAGGTATTGAAGAGACA +
Preference number: 6 (lower is better)
Translates to: YGLYIDGEAGRS*DLPKTKGIEET
Trigger: TGTCTCTTCAATACCTTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTCACCGTCTATGTACAGCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000606471.5
CDS TCA 72 bp GATACTATGGGCATAGACGGTGAGGCAGGCCGTTCCTaGGATCTTCCCAAAACCAAAGGTATTGAAGAGACA +
Preference number: 6 (lower is better)
Translates to: DTMGIDGEAGRS*DLPKTKGIEET
Trigger: TGTCTCTTCAATACCTTTGGTTTTGGGAAGATCTCAGGAACGGCCTGCCTCACCGTCTATGCCCATAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478595.1
ENST00000498096.5
CDS TCA 72 bp TTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTaGGTTTTGGAGTCCCAGCTGGGTAATGTTTATCTT +
Preference number: 6 (lower is better)
Translates to: FILQGDIPEGDG*VLESQLGNVYL
Trigger: AAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACCATCACCTTCTGGAATATCACCCTGGAGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315711.12
ENST00000383681.7
ENST00000473539.5
ENST00000478595.1
ENST00000498096.5
ENST00000606471.5