Pregenerated sensors for CD1B (Homo sapiens)
Ensembl gene IDs: ENSG00000158485Ensembl transcript IDs: ENST00000368168.4, ENST00000451207.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGGAATATGGCAGTGCCTaGGTCGCTATCCCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEEYGSA*VAIPAM Trigger: CATGGCTGGGATAGCGACTCAGGCACTGCCATATTC...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGATTGAGCCAATGGAGGTaGGGTTTCCCCGCATCCACA | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGLSQWR*GFPAST Trigger: TGTGGATGCGGGGAAACCCCACCTCCATTGGCTCAA...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAATCATCCAACCAGCCTaGGCCTTGAGTTTGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGIIQPA*ALSLCP Trigger: TGGGCACAAACTCAAGGCTCAGGCTGGTTGGATGAT...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGAGAATTTCTGTGCCCTaGTGCCACCTTCTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEERISVP*CHLLGK Trigger: CTTCCCCAGAAGGTGGCAGCAGGGCACAGAAATTCT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGTGGGGAAGGCACACATaGAGCATTCTTGACACTCAG | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEWGRHT*SILDTQ Trigger: CTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCA...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGGCTCATGGGATATTCTaGTATGACCGGCGCCTCATA | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEAHGIF*YDRRLI Trigger: TATGAGGCGCCGGTCATATCAGAATATCCCATGAGC...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGACAGATCTGCTTTTCCTaGATTGAGGACGCCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGQICFS*IEDAQE Trigger: CTCTTGGGCGTCCTCAATGCAGGAAAAGCAGATCTG...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGCAGCCTGCTATGCCCTaGATCTCAAAGGGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEQPAMP*ISKGYF Trigger: GAAATACCCCTTTGAGATCCAGGGCATAGCAGGCTG...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGAAACAATTGAGCCAATaGAGGTGGGGTTTCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEKQLSQ*RWGFPA Trigger: TGCGGGGAAACCCCACCTCCATTGGCTCAATTGTTT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGATCATCCAACCAGCCTaGGCCTTGAGTTTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGIIQPA*ALSLCP Trigger: TGGGCACAAACTCAAGGCTCAGGCTGGTTGGATGAT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGTCGCTATCCCAGCCATaGATCTGCAAATCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEESLSQP*ICKSSN Trigger: GTTGGATGATTTGCAGATTCATGGCTGGGATAGCGA...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTCAGGAATATGGCAGTaGCTGAGTCGCTATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGSGIWQ*LSRYPS Trigger: GCTGGGATAGCGACTCAGGCACTGCCATATTCCTGA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAATTTCTGTGCCCTaGTGCCACCTTCTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGRISVP*CHLLGK Trigger: CTTCCCCAGAAGGTGGCAGCAGGGCACAGAAATTCT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAAGGAGGTCGGCCCCTaGAAGGCATGTTCACTGTTA | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGKEVGP*KACSLL Trigger: TAACAGTGAACATGCCTTCCAGGGGCCGACCTCCTT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR TCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGGCAGAGCTGGTATTTaGTCTCCAATTTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGGRAGI*SPISAK Trigger: CTTTGCTGAAATTGGAGATCAAATACCAGCTCTGCC...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR TCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTGGGGAAGGCACACATaGAGCATTCTTGACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGWGRHT*SILDTQ Trigger: CTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGCTGCTTTTCCTGCATTaGGGACGCCCAAGAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGLLFLH*GRPRDI Trigger: GATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAG...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGCAGCCTGCTATGCCCTaGATCTCAAAGGGGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGQPAMP*ISKGYF Trigger: GAAATACCCCTTTGAGATCCAGGGCATAGCAGGCTG...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGTCAGGAAGCTTACTATaGCACCTCCAGAATGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEESGSLL*HLQNVA Trigger: AGCTACATTCTGGAGGTGCCATAGTAAGCTTCCTGA...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGAAACAATTGAGCCAATaGAGGTGGGGTTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEKQLSQ*RWGFSS Trigger: ACTGGAGAAACCCCACCTCCATTGGCTCAATTGTTT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGAGGTCTGGATAACATaGAAGGAGGTCGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLEVWIT*KEVGPW Trigger: CCAGGGGCCGACCTCCTTTCATGTTATCCAGACCTC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR TCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTCGCTATCCCAGCCATaGATCTGCAAATCATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGSLSQP*ICKSSN Trigger: GTTGGATGATTTGCAGATTCATGGCTGGGATAGCGA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGCACATGAAGCATTCTTaGCACTCAGGAAATCCAATC | + |
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Preference number: 4 (lower is better) Translates to: TFGLISWASWYLLRMGEEHMKHS*HSGNPI Trigger: GATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTG...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGATGCAACTTCTTACTaGCAGAGCTGGTATTTGATC | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGDATSY*QSWYLI Trigger: GATCAAATACCAGCTCTGCCAGTAAGAAGTTGCATC...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAAAGGGGTATTTCATCTaGAAATCACCGGCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGKGYFI*KSPAKS Trigger: AGACTTTGCCGGTGATTTCCAGATGAAATACCCCTT...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGAATATGGCAGTGCCTaGGTCGCTATCCCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLEYGSA*VAIPAM Trigger: CATGGCTGGGATAGCGACTCAGGCACTGCCATATTC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGCATTTCACTGGGAGATaGAACTTCTTACTGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGHFTGR*NFLLAE Trigger: CTCTGCCAGTAAGAAGTTGCATCTCCCAGTGAAATG...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR GCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGGGCTTCACTTGTCTTTaGAGATCTGCTTTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGGFTCL*RSAFPA Trigger: TGCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCC...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGATCTTACTGGCAGAGCTaGTATTTGATCTCCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGSYWQS*YLISNF Trigger: GAAATTGGAGATCAAATACCAGCTCTGCCAGTAAGA...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGGCAGCAGCATTTCACTaGGAGATGCAACTTCTTACT | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGAAAFH*EMQLLT Trigger: AGTAAGAAGTTGCATCTCCCAGTGAAATGCTGCTGC...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGATTTGGGCTGATATCTTaGGCTTCTTGGTACTTATTG | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGFGLIS*ASWYLL Trigger: CAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAA...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGATAAGATTGACTTTTaGGCTGATATCTTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DFWADILGFLVLIANGRGDKIDF*ADILGF Trigger: GAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATC...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| 3UTR CAA 72 bp | GATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTaGGTACTTATTGCGAATGGGAGAGGAGACATGATG | + |
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Preference number: 4 (lower is better) Translates to: DKIDFWADILGF*VLIANGRGDMM Trigger: CATCATGTCTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAAGGGGTATTTCATCTaGAAATCACCGGCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGKGYFI*KSPAKS Trigger: AGACTTTGCCGGTGATTTCCAGATGAAATACCCCTT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGGGTACTTATTGCGAATaGGAGAGGAGACATGATGAT | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGGTYCE*ERRHDD Trigger: ATCATCATGTCTCCTCTCCCATTCGCAATAAGTACC...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGCTCATGGGATATTCTaGTATGACCGGCGCCTCATA | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLAHGIF*YDRRLI Trigger: TATGAGGCGCCGGTCATATCAGAATATCCCATGAGC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTGTGTAAAATCAGGGTaGATCACACTGTTAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGCVKSG*ITLLVQ Trigger: CTGTACTAACAGTGTGATTCACCCTGATTTTACACA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTTGAGCCAATGGAGGTaGGGTTTCTCCAGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLLSQWR*GFSSRG Trigger: TCCTCTACTGGAGAAACCCCACCTCCATTGGCTCAA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CCA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGATATCTTGGGCTTCTTaGTACTTATTGCGAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: KIDFWADILGFLVLIANGISWAS*YLLRMG Trigger: TCCCATTCGCAATAAGTACCAAGAAGCCCAAGATAT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTAAGGCTTCAGGAATATaGCAGTGCCTGAGTCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLKASGI*QCLSRY Trigger: ATAGCGACTCAGGCACTGCCATATTCCTGAAGCCTT...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTAGAACAGCTAACAGTTaGAATGGCAGCAGCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLRTANS*NGSSSI Trigger: AATGCTGCTGCTGCCATTTCAACTGTTAGCTGTTCT...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| 3UTR CAA 72 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTaGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADI*GFLVLIANGRG Trigger: TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTCACATGAAGCATTCTTaGCACTCAGGAAATCCAATC | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLHMKHS*HSGNPI Trigger: GATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTG...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR GCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTTGTCTTTGCAGATCTaGTTTTCCTGCATTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLLSLQI*FSCIED Trigger: GTCCTCAATGCAGGAAAAGCAGATCTGCAAAGACAA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGGTACTTATTGCGAATaGGAGAGGAGACATGATGAT | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLGTYCE*ERRHDD Trigger: ATCATCATGTCTCCTCTCCCATTCGCAATAAGTACC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR TCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTGTGTAAAATCAGGGTaGATCACACTGTTAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLCVKSG*ITLLVQ Trigger: CTGTACTAACAGTGTGATTCACCCTGATTTTACACA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATATCTTGGGCTTCTTaGTACTTATTGCGAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLISWAS*YLLRMG Trigger: TCCCATTCGCAATAAGTACCAAGAAGCCCAAGATAT...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTTTGGGCTGATATCTTaGGCTTCTTGGTACTTATTG | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLFGLIS*ASWYLL Trigger: CAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CCA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGATAAGATTGACTTTTaGGCTGATATCTTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKYDKIDFWADILGFLVLDKIDF*ADILGF Trigger: GAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS TCA 90 bp | GTGCCCTGCTGCCACCTTCTGGGGAAGGCACACATGAAGCATTCTTaGCACTCAGGAAATCCAATCCTCCTAGAGCTCCCCTCAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VPCCHLLGKAHMKHS*HSGNPILLELPSGS Trigger: GCTTCCTGAGGGGAGCTCTAGGAGGATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCAGAAGGTGGCAGCAGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS GCA 90 bp | CAGCCAGGCCTCAGGCTTCACTTGTCTTTGCAGATCTGCTTTTCCTaGATTGAGGACGCCCAAGAGATATCGGGGGCAGGTTTCATAGAG | + |
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Preference number: 5 (lower is better) Translates to: QPGLRLHLSLQICFS*IEDAQEISGAGFIE Trigger: CTCTATGAAACCTGCCCCCGATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCCTGAGGCCTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CCA 90 bp | TCAGGAAATCCAATCCTCCTAGAGCTCCCCTCAGGAAGCTTACTATaGCACCTCCAGAATGTAGCTCACAGCCTGCTATGCCCTGGATCT | + |
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Preference number: 5 (lower is better) Translates to: SGNPILLELPSGSLL*HLQNVAHSLLCPGS Trigger: AGATCCAGGGCATAGCAGGCTGTGAGCTACATTCTGGAGGTGCCATAGTAAGCTTCCTGAGGGGAGCTCTAGGAGGATTGGATTTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS TCA 90 bp | GTTTGTGCCCAGGTACTATTGGTAAAGGACGAGGTCTGGATAACATaGAAGGAGGTCGGCCCCTGGAAGGCATGTTCACTGTTACCACCA | + |
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Preference number: 5 (lower is better) Translates to: VCAQVLLVKDEVWIT*KEVGPWKACSLLPP Trigger: TGGTGGTAACAGTGAACATGCCTTCCAGGGGCCGACCTCCTTTCATGTTATCCAGACCTCGTCCTTTACCAATAGTACCTGGGCACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CAA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGTGTGCCCAGGTACTATaGGTAAAGGACGAGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TFGLISWASWYLLRMGEECAQVL*VKDEVW Trigger: CCAGACCTCGTCCTTTACCAATAGTACCTGGGCACA...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CAA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGATCACCGGCAAAGTCTaGTACTTCTCGAGCGAATCC | + |
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Preference number: 5 (lower is better) Translates to: TFGLISWASWYLLRMGEEITGKV*YFSSES Trigger: GGATTCGCTCGAGAAGTACAAGACTTTGCCGGTGAT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGAGGCTTCACTTGTCTTaGCAGATCTGCTTTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TFGLISWASWYLLRMGEERLHLS*QICFSC Trigger: GCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCCT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGGCTTCTTGGTACTTATaGCGAATGGGAGAGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: TFGLISWASWYLLRMGEEASWYL*RMGEET Trigger: TGTCTCCTCTCCCATTCGCAATAAGTACCAAGAAGC...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGATCACCGGCAAAGTCTaGTACTTCTCGAGCGAATCC | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGITGKV*YFSSES Trigger: GGATTCGCTCGAGAAGTACAAGACTTTGCCGGTGAT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTCTGCTTTTCCTGCATaGAGGACGCCCAAGAGATAT | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGSAFPA*RTPKRY Trigger: ATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAGA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGGCTTCACTTGTCTTaGCAGATCTGCTTTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGRLHLS*QICFSC Trigger: GCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCCT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGGCTTCTTGGTACTTATaGCGAATGGGAGAGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGASWYL*RMGEET Trigger: TGTCTCCTCTCCCATTCGCAATAAGTACCAAGAAGC...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTTATTGCCAAAACAATaGAGCCAATGGAGGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGLLPKQ*SQWRWG Trigger: ACCCCACCTCCATTGGCTCAATTGTTTTGGCAATAA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | ACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGAGAGGAAGGCACTATTATaGCCAAAACAATTGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: TFGLISWASWYLLRMGEERKALL*PKQLSQ Trigger: TTGGCTCAATTGTTTTGGCAATAATAGTGCCTTCCT...CTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGGATATCTTGGGCTTCTaGGTACTTATTGCGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGDILGF*VLIANG Trigger: CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATC...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | GACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGAGGATTTTGGGCTGATATCTaGGGCTTCTTGGTACTTATT | + |
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Preference number: 5 (lower is better) Translates to: DFWADILGFLVLIANGRGFWADI*GFLVLI Trigger: AATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAA...TCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGTGGCAGAGCTGGTATTaGATCTCCAATTTCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGWQSWY*ISNFSK Trigger: TTTGCTGAAATTGGAGATCAAATACCAGCTCTGCCA...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS-3UTR CAA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGGCCTCAGGCTTCACTaGTCTTTGCAGATCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LKYDKIDFWADILGFLVLGLRLH*SLQICF Trigger: AAAGCAGATCTGCAAAGACAAGTGAAGCCTGAGGCC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | AAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTATTGCGAATGGGAGGAAGGCACTATTATaGCCAAAACAATTGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: KIDFWADILGFLVLIANGRKALL*PKQLSQ Trigger: TTGGCTCAATTGTTTTGGCAATAATAGTGCCTTCCT...CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTTATTGCCAAAACAATaGAGCCAATGGAGGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LKYDKIDFWADILGFLVLLLPKQ*SQWRWG Trigger: ACCCCACCTCCATTGGCTCAATTGTTTTGGCAATAA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTGATATCTTGGGCTTCTaGGTACTTATTGCGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: LKYDKIDFWADILGFLVLDILGF*VLIANG Trigger: CCCATTCGCAATAAGTACCAAGAAGCCCAAGATATC...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS-3UTR CAA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTTGGTACTTTTTTGGGCTGATATCTaGGGCTTCTTGGTACTTATT | + |
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Preference number: 5 (lower is better) Translates to: LKYDKIDFWADILGFLVLFWADI*GFLVLI Trigger: AATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAA...AAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CAA 90 bp | TGTGCCCTGCTGCCACCTTCTGGGGAAGGCACACATGAAGCATTCTaGACACTCAGGAAATCCAATCCTCCTAGAGCTCCCCTCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CALLPPSGEGTHEAF*TLRKSNPPRAPLRK Trigger: CTTCCTGAGGGGAGCTCTAGGAGGATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCAGAAGGTGGCAGCAGGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CCA 72 bp | CCAATCCTCCTAGAGCTCCCCTCAGGAAGCTTACTATaGCACCTCCAGAATGTAGCTCACAGCCTGCTATGC | + |
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Preference number: 6 (lower is better) Translates to: PILLELPSGSLL*HLQNVAHSLLC Trigger: GCATAGCAGGCTGTGAGCTACATTCTGGAGGTGCCATAGTAAGCTTCCTGAGGGGAGCTCTAGGAGGATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS TCA 72 bp | TGCCACCTTCTGGGGAAGGCACACATGAAGCATTCTTaGCACTCAGGAAATCCAATCCTCCTAGAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: CHLLGKAHMKHS*HSGNPILLELP Trigger: GGGGAGCTCTAGGAGGATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCAGAAGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS GCA 72 bp | CTCAGGCTTCACTTGTCTTTGCAGATCTGCTTTTCCTaGATTGAGGACGCCCAAGAGATATCGGGGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LRLHLSLQICFS*IEDAQEISGAG Trigger: ACCTGCCCCCGATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS GCA 72 bp | CAGCCAGGCCTCAGGCTTCACTTGTCTTTGCAGATCTaGTTTTCCTGCATTGAGGACGCCCAAGAGATATCG | + |
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Preference number: 6 (lower is better) Translates to: QPGLRLHLSLQI*FSCIEDAQEIS Trigger: CGATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCCTGAGGCCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CAA 72 bp | CTGCCACCTTCTGGGGAAGGCACACATGAAGCATTCTaGACACTCAGGAAATCCAATCCTCCTAGAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LPPSGEGTHEAF*TLRKSNPPRAP Trigger: GGGAGCTCTAGGAGGATTGGATTTCCTGAGTGTCAAGAATGCTTCATGTGTGCCTTCCCCAGAAGGTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS TCA 72 bp | CAGGTACTATTGGTAAAGGACGAGGTCTGGATAACATaGAAGGAGGTCGGCCCCTGGAAGGCATGTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: QVLLVKDEVWIT*KEVGPWKACSL Trigger: CAGTGAACATGCCTTCCAGGGGCCGACCTCCTTTCATGTTATCCAGACCTCGTCCTTTACCAATAGTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368168.4 |
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| CDS CAA 72 bp | GGCTTCACTTGTCTTTGCAGATCTGCTTTTCCTGCATaGAGGACGCCCAAGAGATATCGGGGGCAGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GFTCLCRSAFPA*RTPKRYRGQVS Trigger: TGAAACCTGCCCCCGATATCTCTTGGGCGTCCTCAATGCAGGAAAAGCAGATCTGCAAAGACAAGTGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CAA 90 bp | CTGGATCTCAAAGGGGTATTTCATCTGGAAATCACCGGCAAAGTCTaGTACTTCTCGAGCGAATCCAAAGATGTAGACTCGGAATATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDLKGVFHLEITGKV*YFSSESKDVDSEYL Trigger: GAGATATTCCGAGTCTACATCTTTGGATTCGCTCGAGAAGTACAAGACTTTGCCGGTGATTTCCAGATGAAATACCCCTTTGAGATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CAA 72 bp | AAAGGGGTATTTCATCTGGAAATCACCGGCAAAGTCTaGTACTTCTCGAGCGAATCCAAAGATGTAGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: KGVFHLEITGKV*YFSSESKDVDS Trigger: CGAGTCTACATCTTTGGATTCGCTCGAGAAGTACAAGACTTTGCCGGTGATTTCCAGATGAAATACCCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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| CDS CAA 90 bp | TTGAAATATGATAAGATTGACTTTTGGGCTGATATCTTGGGCTTCTaGGTACTTATTGCGAATGGGAGAGGAGACATGATGATGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LKYDKIDFWADILGF*VLIANGRGDMMMAH Trigger: ATGAGCCATCATCATGTCTCCTCTCCCATTCGCAATAAGTACCAAGAAGCCCAAGATATCAGCCCAAAAGTCAATCTTATCATATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368168.4 ENST00000451207.5 |
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