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Pregenerated sensors for CD180 (Homo sapiens)

Ensembl gene IDs: ENSG00000134061

Ensembl transcript IDs: ENST00000256447.5, ENST00000515027.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTGGGAGGGATGTCGGTGAGTAGAAGGGGAATGGCCTCCCTGTaGGAGACTCCGGGGCCGGCAGTCCCTGCCCAGTCCCTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: VLGGMSVSRRGMASL*ETPGPAVPAQSLPL
Trigger: CAGAGGGAGGGACTGGGCAGGGACTGCCGGCCCCGGAGTCTCCCACAGGGAGGCCATTCCCCTTCTACTCACCGACATCCCTCCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp TGTGGGAGACTCCGGGGCCGGCAGTCCCTGCCCAGTCCCTCCCTCTaGTTCCTCCCACTCTTCCACATGCGGAAAGGGCTCTGTGCCTCT +
Preference number: 1 (lower is better)
Translates to: CGRLRGRQSLPSPSL*FLPLFHMRKGLCAS
Trigger: AGAGGCACAGAGCCCTTTCCGCATGTGGAAGAGTGGGAGGAAGCAGAGGGAGGGACTGGGCAGGGACTGCCGGCCCCGGAGTCTCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp CTCCCTCTGCTTCCTCCCACTCTTCCACATGCGGAAAGGGCTCTGTaGCTCTCACAGCAGCATCTGACCCTCTGGACTGAGTCATTCGGT +
Preference number: 1 (lower is better)
Translates to: LPLLPPTLPHAERAL*LSQQHLTLWTESFG
Trigger: ACCGAATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGAGGCACAGAGCCCTTTCCGCATGTGGAAGAGTGGGAGGAAGCAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp CTCTTCCACATGCGGAAAGGGCTCTGTGCCTCTCACAGCAGCATCTaGCCCTCTGGACTGAGTCATTCGGTGTACTTGCCTAGAAGGTTC +
Preference number: 1 (lower is better)
Translates to: LFHMRKGLCASHSSI*PSGLSHSVYLPRRF
Trigger: GAACCTTCTAGGCAAGTACACCGAATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGAGGCACAGAGCCCTTTCCGCATGTGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp CATTCAGTGGTTCAGGCCCCTGTCCATGGCTGGTGTGACCTTTGGTaGCATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCT +
Preference number: 1 (lower is better)
Translates to: HSVVQAPVHGWCDLW*HPQPQQKPLLTKPA
Trigger: AGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAGGGGCCTGAACCACTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp GGAAAGGGCTCTGTGCCTCTCACAGCAGCATCTGACCCTCTGGACTaGGTCATTCGGTGTACTTGCCTAGAAGGTTCTTTAGCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: GKGSVPLTAASDPLD*VIRCTCLEGSLALG
Trigger: TCCCAGAGCTAAAGAACCTTCTAGGCAAGTACACCGAATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGAGGCACAGAGCCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp TGCTGGCACAGGGAAAGGTGTAATTCTCTCCTGGGTTGTAGGAGTTaGAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: CWHRERCNSLLGCRS*SSCRESSVMEASQL
Trigger: AAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAGAATTACACCTTTCCCTGTGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp CTCTCCTGGGTTGTAGGAGTTGCAGCTCATGCAGAGAGTCCTCTGTaGTGGAGGCCAGTCAGCTTTTATGGACTTCAGTGCTATTTGCTC +
Preference number: 1 (lower is better)
Translates to: LSWVVGVAAHAESPL*WRPVSFYGLQCYLL
Trigger: GAGCAAATAGCACTGAAGTCCATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp CAGATATTGCCTGTGTTCAAGGGCTGTGCTGTACTAAGCAGTGGCTaGTGGCACAGGGAAAGGTGTAATTCTCTCCTGGGTTGTAGGAGT +
Preference number: 1 (lower is better)
Translates to: QILPVFKGCAVLSSG*WHRERCNSLLGCRS
Trigger: ACTCCTACAACCCAGGAGAGAATTACACCTTTCCCTGTGCCAGCAGCCACTGCTTAGTACAGCACAGCCCTTGAACACAGGCAATATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 90 bp ATATTGCCTGTGTTCAAGGGCTGTGCTGTACTAAGCAGTGGCTGCTaGCACAGGGAAAGGTGTAATTCTCTCCTGGGTTGTAGGAGTTGC +
Preference number: 1 (lower is better)
Translates to: ILPVFKGCAVLSSGC*HRERCNSLLGCRSC
Trigger: GCAACTCCTACAACCCAGGAGAGAATTACACCTTTCCCTGTGCCAGCAGCCACTGCTTAGTACAGCACAGCCCTTGAACACAGGCAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp AGGGAAAGGTGTAATTCTCTCCTGGGTTGTAGGAGTTGCAGCTCATaGAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGACT +
Preference number: 1 (lower is better)
Translates to: RERCNSLLGCRSCSS*RESSVMEASQLLWT
Trigger: AGTCCATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAGAATTACACCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp TTTGGACCTTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTaGGCCAACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: FGPSTFYMESFGWEP*ANLSPTESQYLGVR
Trigger: CCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAAGGTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 90 bp AGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATaGACTTCAGTGCTATTTGCTCCAGTACCCTTTGAAATGCAGGGT +
Preference number: 1 (lower is better)
Translates to: SSCRESSVMEASQLL*TSVLFAPVPFEMQG
Trigger: ACCCTGCATTTCAAAGGGTACTGGAGCAAATAGCACTGAAGTCCATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp ATTGAGACTTTGTCCCCAAGTAAGTTTCTCAAATGGCTACATTACTaGGAACCCAGACCCAAGCACAATGCTGTAGTGGGGGTGGGTAGT +
Preference number: 1 (lower is better)
Translates to: IETLSPSKFLKWLHY*EPRPKHNAVVGVGS
Trigger: ACTACCCACCCCCACTACAGCATTGTGCTTGGGTCTGGGTTCTCAGTAATGTAGCCATTTGAGAAACTTACTTGGGGACAAAGTCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 90 bp TGGATTCTTAGAGTTTGGACCTTCCACATTTTACATGGAATCATTTaGCTGGGAACCCTGAGCCAACCTCAGTCCAACAGAATCTCAGTA +
Preference number: 1 (lower is better)
Translates to: WILRVWTFHILHGII*LGTLSQPQSNRISV
Trigger: TACTGAGATTCTGTTGGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAAGGTCCAAACTCTAAGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp AAGAAATCCCTCAAAGGAGAAAATATTAGCACTGAAATCTCAAGATaGAGGAAGGAGCCATTTGGAGGCCAATGGCAGCATCTTAGAGGC +
Preference number: 1 (lower is better)
Translates to: KKSLKGENISTEISR*RKEPFGGQWQHLRG
Trigger: GCCTCTAAGATGCTGCCATTGGCCTCCAAATGGCTCCTTCCTTCATCTTGAGATTTCAGTGCTAATATTTTCTCCTTTGAGGGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 90 bp ATTTATTTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATaGCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGT +
Preference number: 1 (lower is better)
Translates to: IYFTVLLEKRLLRTG*PNEKSILGHSPPAS
Trigger: ACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 90 bp GGCAATTATGCTTTGCTAAGGCCTGGGCCCCTTTCATTGTTAGTGTaGTGTAATTCACATCAGAGGTTTTCTACAGAATTGTTTCGTTTT +
Preference number: 1 (lower is better)
Translates to: GNYALLRPGPLSLLV*CNSHQRFSTELFRF
Trigger: AAAACGAAACAATTCTGTAGAAAACCTCTGATGTGAATTACATCACACTAACAATGAAAGGGGCCCAGGCCTTAGCAAAGCATAATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACGGGGCCGGCAGTCCCTaGCCAGTCCCTCCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHGAGSP*PVPPSA
Trigger: AGCAGAGGGAGGGACTGGGCAGGGACTGCCGGCCCC...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGCAGGATGGGCAATTATaGTTTGCTAAGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMQDGQL*FAKAWA
Trigger: GGCCCAGGCCTTAGCAAAGCATAATTGCCCATCCTG...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACGGCTGGCTTCAGCTCTaGCAAATTGTGGGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYGWLQL*QIVGAD
Trigger: ATCAGCCCCCACAATTTGTCAGAGCTGAAGCCAGCC...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACGAACAATGCACCACTTaGGTCCAGGAGCTCCCGCCA +
Preference number: 2 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNEQCTT*VQELPP
Trigger: TGGCGGGAGCTCCTGGACTCAAGTGGTGCATTGTTC...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTAGCACAGTGAGTCCCTaGCCAGTTCCAGGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFSTVSP*PVPGSN
Trigger: ATTGCTTCCTGGAACTGGGCAGGGACTCACTGTGCT...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGCAGCATCTGACCCTCTaGACTGAGTCATTCGGTGTA +
Preference number: 2 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMQHLTL*TESFGV
Trigger: TACACCGAATGACTCAGTCCAGAGGGTCAGATGCTG...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCAGGCCCAGGAAACCGTaGAGAGGTCAGGAGCTAAGA +
Preference number: 2 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSRPRKP*RGQELR
Trigger: TCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCT...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACCTCAGAAAAGCACAGTaGGTCCCTGCCCAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNLRKAQ*VPAQFQ
Trigger: CTGGAACTGGGCAGGGACTCACTGTGCTTTTCTGAG...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACTCTGACCCTCTGGACTaGGTCATTCGGTGTACTTGC +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYSDPLD*VIRCTC
Trigger: GCAAGTACACCGAATGACTCAGTCCAGAGGGTCAGA...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTGCCTGGTTTCTGAACTaGGTGAGGCAAATGTGGAAG +
Preference number: 2 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICAWFLN*VRQMWK
Trigger: CTTCCACATTTGCCTCACTCAGTTCAGAAACCAGGC...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCATCCCACTCTTCCACATaGGGAAAGGGCTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: QQKPLLTKPALLCSQQLASHSST*GKGSVP
Trigger: AGGCACAGAGCCCTTTCCGCATGTGGAAGAGTGGGA...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACTCTCACAGCAGCATCTaGCCCTCTGGACTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNSHSSI*PSGLSH
Trigger: ATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGA...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTCTGAAAAGTCTGGTCTaGTCACCAGCAGATGACAGT +
Preference number: 2 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPLKSLV*SPADDS
Trigger: ACTGTCATCTGCTGGTGACCAGACCAGACTTTTCAG...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCAAGGAAGGAGCCATTTaGAGGCCAATGGCAGCATCT +
Preference number: 2 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSKEGAI*RPMAAS
Trigger: AGATGCTGCCATTGGCCTCCAAATGGCTCCTTCCTT...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAAATGGCTACATTACTaGGAACCCAGACCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYKWLHY*EPRPKH
Trigger: GTGCTTGGGTCTGGGTTCTCAGTAATGTAGCCATTT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAGGGTCACAGCCCACCTaGAAGTTAGGATCTGTAACA +
Preference number: 2 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAGSQPT*KLGSVT
Trigger: TGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCC...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACATGAGAAGAGCATTTTaGGTCACAGCCCACCTGCAA +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYMRRAF*VTAHLQ
Trigger: TTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTGTTTTCACTCTGTTATaGTGTCCCACTAGTATGCCT +
Preference number: 2 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFVFTLL*CPTSMP
Trigger: AGGCATACTAGTGGGACATCATAACAGAGTGAAAAC...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAGCTCTGACAAATTGTaGGGGCTGATGATCTCCTTT +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYSSDKL*GLMISF
Trigger: AAAGGAGATCATCAGCCCCCACAATTTGTCAGAGCT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTGCTAGCATGCAGGGATaGCTTCTTCCTCATTTTCAC +
Preference number: 2 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTASMQG*LLPHFH
Trigger: GTGAAAATGAGGAAGAAGGCATCCCTGCATGCTAGC...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 90 bp AATAAGAATGGCACGACAGTTTTCTGTCTTGGAATTTTACAGATATaGCCTGTGTTCAAGGGCTGTGCTGTACTAAGCAGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: NKNGTTVFCLGILQI*PVFKGCAVLSSGCW
Trigger: CCAGCAGCCACTGCTTAGTACAGCACAGCCCTTGAACACAGGCAATATCTGTAAAATTCCAAGACAGAAAACTGTCGTGCCATTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGCTGGTCACCAGCAGATaGCAGTTCTTTCACTTAGAG +
Preference number: 2 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKLVTSR*QFFHLE
Trigger: CTCTAAGTGAAAGAACTGTCATCTGCTGGTGACCAG...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAAAGAGGTTCACCCACTaGTGTTCCCTGCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAKRFTH*CSLPAL
Trigger: CAGGGCAGGCAGGGAACAGCAGTGGGTGAACCTCTT...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGTGGATTCTTAGAGTTTaGACCTTCCACATTTTACAT +
Preference number: 2 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMWILRV*TFHILH
Trigger: ATGTAAAATGTGGAAGGTCCAAACTCTAAGAATCCA...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACCTAAGCACACTTATTTaGTTTCTCTGGAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYLSTLI*FLWKPS
Trigger: TGAAGGTTTCCAGAGAAAGCAAATAAGTGTGCTTAG...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR GCA 90 bp ATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAGTCATTCGGTGTACTTaGCTAGAAGGTTCTTTAGCT +
Preference number: 2 (lower is better)
Translates to: MRRAFWVTAHLQVRICNIVIRCT*LEGSLA
Trigger: AGCTAAAGAACCTTCTAGGCAAGTACACCGAATGAC...TATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 90 bp GATTGGAGAGTTGGACAAATAAGAATGGCACGACAGTTTTCTGTCTaGGAATTTTACAGATATTGCCTGTGTTCAAGGGCTGTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: DWRVGQIRMARQFSV*EFYRYCLCSRAVLY
Trigger: GTACAGCACAGCCCTTGAACACAGGCAATATCTGTAAAATTCCAAGACAGAAAACTGTCGTGCCATTCTTATTTGTCCAACTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAAGGGCAGTATGTCTATaGGTTGGTAAATCAGCAATT +
Preference number: 2 (lower is better)
Translates to: NIKIANYTDWRVGQIRMARAVCL*VGKSAI
Trigger: AATTGCTGATTTACCAACCCATAGACATACTGCCCT...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 90 bp TCCAAGTTACATATTAAATATTATGGAGGGCAGTATGTCTATGGGTaGGTAAATCAGCAATTAGTATTTTCCATCTGCAGCTTAAATCCC +
Preference number: 2 (lower is better)
Translates to: SKLHIKYYGGQYVYG*VNQQLVFSICSLNP
Trigger: GGGATTTAAGCTGCAGATGGAAAATACTAATTGCTGATTTACCAACCCATAGACATACTGCCCTCCATAATATTTAATATGTAACTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 90 bp ACTGAGCTACATCGTGCAATAATAACACATTTTTATAGGAGTAGCTaGTCAGAGCAGCAACAACATGCAATACATAAAACCAATAAACAC +
Preference number: 2 (lower is better)
Translates to: TELHRAIITHFYRSS*SEQQQHAIHKTNKH
Trigger: GTGTTTATTGGTTTTATGTATTGCATGTTGTTGCTGCTCTGACAAGCTACTCCTATAAAAATGTGTTATTATTGCACGATGTAGCTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp GTTCAGGCCCCTGTCCATGGCTGGTGTGACCTTTGGTaGCATCCCCAGCCTCAACAGAAACCACTTCTCACT +
Preference number: 3 (lower is better)
Translates to: VQAPVHGWCDLW*HPQPQQKPLLT
Trigger: AGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAGGGGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGTTCAGCTCTGACAAATaGTGGGGGCTGATGATCTCC +
Preference number: 3 (lower is better)
Translates to: NMWEAQETVERSGAKSQQFSSDK*WGLMIS
Trigger: GGAGATCATCAGCCCCCACAATTTGTCAGAGCTGAA...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 72 bp CCTGTGTTCAAGGGCTGTGCTGTACTAAGCAGTGGCTaGTGGCACAGGGAAAGGTGTAATTCTCTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: PVFKGCAVLSSG*WHRERCNSLLG
Trigger: ACCCAGGAGAGAATTACACCTTTCCCTGTGCCAGCAGCCACTGCTTAGTACAGCACAGCCCTTGAACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 72 bp GTGGCTGCTGGCACAGGGAAAGGTGTAATTCTCTCCTaGGTTGTAGGAGTTGCAGCTCATGCAGAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: VAAGTGKGVILS*VVGVAAHAESP
Trigger: AGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAGAATTACACCTTTCCCTGTGCCAGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 72 bp AGGGAAAGGTGTAATTCTCTCCTGGGTTGTAGGAGTTaGAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCC +
Preference number: 3 (lower is better)
Translates to: RERCNSLLGCRS*SSCRESSVMEA
Trigger: GGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAGAATTACACCTTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGAGTCATTCGGTGTACTaGCCTAGAAGGTTCTTTAGC +
Preference number: 3 (lower is better)
Translates to: NMWEAQETVERSGAKSQQSHSVY*PRRFFS
Trigger: GCTAAAGAACCTTCTAGGCAAGTACACCGAATGACT...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp GTTGTAGGAGTTGCAGCTCATGCAGAGAGTCCTCTGTaGTGGAGGCCAGTCAGCTTTTATGGACTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: VVGVAAHAESPL*WRPVSFYGLQC
Trigger: GCACTGAAGTCCATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 72 bp TGTAATTCTCTCCTGGGTTGTAGGAGTTGCAGCTCATaGAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: CNSLLGCRSCSS*RESSVMEASQL
Trigger: AAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTCCTACAACCCAGGAGAGAATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp TCTGTGCCTCTCACAGCAGCATCTGACCCTCTGGACTaGGTCATTCGGTGTACTTGCCTAGAAGGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: SVPLTAASDPLD*VIRCTCLEGSL
Trigger: TAAAGAACCTTCTAGGCAAGTACACCGAATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGAGGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp TCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATaGGAAGAGCATTTTGGGTCACAGCCCACCTGCAAG +
Preference number: 3 (lower is better)
Translates to: SGKETSKNRMPK*EEHFGSQPTCK
Trigger: CTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR GCA 72 bp TGGAATTTTACAGATATTGCCTGTGTTCAAGGGCTGTaGTGTACTAAGCAGTGGCTGCTGGCACAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: WNFTDIACVQGL*CTKQWLLAQGK
Trigger: CTTTCCCTGTGCCAGCAGCCACTGCTTAGTACAGCACAGCCCTTGAACACAGGCAATATCTGTAAAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGCTAAGCACACTTATTaGCTTTCTCTGGAAACCTTC +
Preference number: 3 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMAKHTY*LSLETF
Trigger: GAAGGTTTCCAGAGAAAGCAAATAAGTGTGCTTAGC...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTAATGAGAAGAGCATTTaGGGTCACAGCCCACCTGCA +
Preference number: 3 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTNEKSI*GHSPPA
Trigger: TGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp TTGTCCCCAAGTAAGTTTCTCAAATGGCTACATTACTaGGAACCCAGACCCAAGCACAATGCTGTAGTGGGG +
Preference number: 3 (lower is better)
Translates to: LSPSKFLKWLHY*EPRPKHNAVVG
Trigger: CCCCACTACAGCATTGTGCTTGGGTCTGGGTTCTCAGTAATGTAGCCATTTGAGAAACTTACTTGGGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 72 bp AGAGTTTGGACCTTCCACATTTTACATGGAATCATTTaGCTGGGAACCCTGAGCCAACCTCAGTCCAACAGA +
Preference number: 3 (lower is better)
Translates to: RVWTFHILHGII*LGTLSQPQSNR
Trigger: TCTGTTGGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAAGGTCCAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CCA 72 bp AGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATaGACTTCAGTGCTATTTGCTCCAGTACCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: RESSVMEASQLL*TSVLFAPVPFE
Trigger: TTCAAAGGGTACTGGAGCAAATAGCACTGAAGTCCATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACATAAGGATTGAGACTTaGTCCCCAAGTAAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYIRIET*SPSKFL
Trigger: GAGAAACTTACTTGGGGACAAAGTCTCAATCCTTAT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR TCA 72 bp GCTTTGCTAAGGCCTGGGCCCCTTTCATTGTTAGTGTaGTGTAATTCACATCAGAGGTTTTCTACAGAATTG +
Preference number: 3 (lower is better)
Translates to: ALLRPGPLSLLV*CNSHQRFSTEL
Trigger: CAATTCTGTAGAAAACCTCTGATGTGAATTACATCACACTAACAATGAAAGGGGCCCAGGCCTTAGCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCATCACTTAGAGCAATTTaGCTAAGCACACTTATTTGC +
Preference number: 3 (lower is better)
Translates to: QQKPLLTKPALLCSQQLASLRAI*LSTLIC
Trigger: GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGA...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAACCCTCTCATGGCACTaGTATTTGGGAGAGACAAGA +
Preference number: 3 (lower is better)
Translates to: NIKIANYTDWRVGQIRMATLSWH*YLGETR
Trigger: TCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGT...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR-3UTR CAA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCATTTTATAGGAGTAGCTaGTCAGAGCAGCAACAACAT +
Preference number: 3 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAFYRSS*SEQQQH
Trigger: ATGTTGTTGCTGCTCTGACAAGCTACTCCTATAAAA...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGGGGGCCGGCAGTCCCTaGCCAGTCCCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQGAGSP*PVPPSA
Trigger: AGCAGAGGGAGGGACTGGGCAGGGACTGCCGGCCCC...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGAAGAGGTTCACCCACTaGTGTTCCCTGCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQKRFTH*CSLPAL
Trigger: CAGGGCAGGCAGGGAACAGCAGTGGGTGAACCTCTT...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGCCCAAAAGAAGCAGCTaGCGTCAAACGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQPKRSS*RQTPSQ
Trigger: CTGTGATGGCGTTTGACGTCAGCTGCTTCTTTTGGG...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACCCTAGGAGATGCCAGTaGAAAACATGTGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHPRRCQ*KTCGRP
Trigger: GGGCCTCCCACATGTTTTTCACTGGCATCTCCTAGG...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGAAGGCCCTGGCAATTTaGCAGCCAGAGAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQKALAI*QPERYS
Trigger: TGAGTACCTCTCTGGCTGCCAAATTGCCAGGGCCTT...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGAGGAAAGAGCAAGTGTaGAGGCCTGAAATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQRKEQV*RPEIPE
Trigger: CTCAGGGATTTCAGGCCTTCACACTTGCTCTTTCCT...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACTGCTCCAGTACCCTTTaGAATGCAGGGTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHCSSTL*NAGSAH
Trigger: GTGAGCTGACCCTGCATTTCAAAGGGTACTGGAGCA...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACCTGGGTTGTAGGAGTTaGAGCTCATGCAGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHLGCRS*SSCRES
Trigger: GGACTCTCTGCATGAGCTGCAACTCCTACAACCCAG...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGAATGGAATCAAACTGTaGAGGCCCTGGCAATTTGGC +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQNGIKL*RPWQFG
Trigger: GCCAAATTGCCAGGGCCTTCACAGTTTGATTCCATT...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACCCCACTGCTGTTCCCTaGCTGCCCTGCTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYPTAVP*LPCFSW
Trigger: CCAGGAAAAGCAGGGCAGGCAGGGAACAGCAGTGGG...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGTGCTTTGCTAAGGCCTaGGCCCCTTTCATTGTTAGT +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQCFAKA*APFIVS
Trigger: ACTAACAATGAAAGGGGCCCAGGCCTTAGCAAAGCA...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACGCGATGTTTCTGCCATaGATATCAGGGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHAMFLP*ISGDFQ
Trigger: CTGGAAATCCCCTGATATTCATGGCAGAAACATCGC...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTAAGCTGCCCACGGTCTaGAGTAGGTTGGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFKLPTV*SRLVFV
Trigger: CACGAAGACCAACCTACTTCAGACCGTGGGCAGCTT...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCTCAGAAAAGCACAGTaGGTCCCTGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFLRKAQ*VPAQFQ
Trigger: CTGGAACTGGGCAGGGACTCACTGTGCTTTTCTGAG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTTGTCCATGGCTGGTGTaGCCTTTGGTGACATCCCCA +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFCPWLV*PLVTSP
Trigger: TGGGGATGTCACCAAAGGTCACACCAGCCATGGACA...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACTCCCAAGCTGTGGAATaGTTGCTGGTCTATAGAGAG +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHSQAVE*LLVYRE
Trigger: CTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGA...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCTACGGAGCAGCAAGCTaGATCGCATGGAAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAYGAAS*IAWKGA
Trigger: CGCTCCCTTCCATGCGATGCAGCTTGCTGCTCCGTA...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCGCGGGTTTGCACACGTaGTCTCCTCCGAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAAGLHT*SPPSLQ
Trigger: TTGAAGGCTCGGAGGAGACCACGTGTGCAAACCCGC...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGTTACATGGAATCATTTaGCTGGGAACCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQLHGII*LGTLSQ
Trigger: TTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAA...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAGTTCAGGCTTAGGTTaGTGGCCTGCTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYSSGLG*WPAPET
Trigger: GGTCTCTGGAGCAGGCCATCAACCTAAGCCTGAACT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGCAGCCAACACCAAGGTaGAGTTTCTTCACGTTGCCT +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMQPTPR*SFFTLP
Trigger: AGGCAACGTGAAGAAACTTCACCTTGGTGTTGGCTG...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTTCTGACCCTCTGGACTaGGTCATTCGGTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFSDPLD*VIRCTC
Trigger: GCAAGTACACCGAATGACTCAGTCCAGAGGGTCAGA...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCGCAGAGAGTCCTCTGTaGTGGAGGCCAGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSAESPL*WRPVSF
Trigger: AAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGC...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTGAGAAGCGGTGTTCCTaGAGGTTGAGGCTCTCAACA +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFEKRCS*RLRLST
Trigger: TGTTGAGAGCCTCAACCTGCAGGAACACCGCTTCTC...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACTCCCACTCTTCCACATaGGGAAAGGGCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYSHSST*GKGSVP
Trigger: AGGCACAGAGCCCTTTCCGCATGTGGAAGAGTGGGA...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGAGGAGTTGCAGCTCATaGAGAGAGTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMRSCSS*RESSVM
Trigger: CATCACAGAGGACTCTCTGCATGAGCTGCAACTCCT...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCAGGCCCAGGAAACCGTaGAGAGGTCAGGAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRARPRKP*RGQELR
Trigger: TCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTCTGAAATGTGGTGGATaGGATGTCAGAGAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICLKCGG*DVREAV
Trigger: CACCGCTTCTCTGACATCTCATCCACCACATTTCAG...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGATTCTTGGAGTTGGGTaGAGCACTGAAATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMILGVG*STEMWW
Trigger: CCACCACATTTCAGTGCTTCACCCAACTCCAAGAAT...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAGGGAGGAGACGGGGTaGGATGATGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICREETG*DDVNAV
Trigger: AACAGCATTAACATCATCTCACCCCGTCTCCTCCCT...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAGGCTGGCTTCAGCTCTaGCAAATTGTGGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAGWLQL*QIVGAD
Trigger: ATCAGCCCCCACAATTTGTCAGAGCTGAAGCCAGCC...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCTTAGGTTGATGGCCTaGTCCAGAGACCTCATGTCT +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFLRLMA*SRDLMS
Trigger: AGACATGAGGTCTCTGGAGCAGGCCATCAACCTAAG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACCTAGAAGATGCTGATTaGTGGTATCAAGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHLEDAD*WYQGSS
Trigger: ACTGCTTCCTTGATACCAGCAATCAGCATCTTCTAG...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTCAGTACCCTTTGAAATaGAGGGTCAGCTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPQYPLK*RVSSLS
Trigger: GCTCAGTGAGCTGACCCTGCATTTCAAAGGGTACTG...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGGAATTTTACAGATATTaGCTGTGTTCAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQEFYRY*LCSRAV
Trigger: CACAGCCCTTGAACACAGGCAATATCTGTAAAATTC...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTCCCGCCAAGCTTGTCTaGCAATCAAGACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPPAKLV*QSRLQK
Trigger: CTTCTGAAGTCTTGATTGCCAGACAAGCTTGGCGGG...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACAGAATCGCTGGAACCTaGGAGGCGGAGGTTACAGTG +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNRIAGT*EAEVTV
Trigger: CACTGTAACCTCCGCCTCCCAGGTTCCAGCGATTCT...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGGCAAGCTGCATCGCATaGAAGGGAGCGGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKASCIA*KGAGLR
Trigger: TCTCAGGCCCGCTCCCTTCCATGCGATGCAGCTTGC...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGAAAAGATGCTTCAGTaGCTTGGGCCCATTAAGCGA +
Preference number: 4 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPEKMLQ*LGPIKR
Trigger: TCGCTTAATGGGCCCAAGTCACTGAAGCATCTTTTC...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGTCCCTTGAGCATGGCTaGACTAATATCTTCGTCATC +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMSLEHG*TNIFVI
Trigger: GATGACGAAGATATTAGTTCAGCCATGCTCAAGGGA...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCGGTGTTCCTGCAGGTTaGGGCTCTCAACAGACATTT +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAGVPAG*GSQQTF
Trigger: AAATGTCTGTTGAGAGCCTCAACCTGCAGGAACACC...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAGTGGGACAGGTTTTTaGGTTGCAGACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYSGTGF*VADCSS
Trigger: ACTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCTGGTCACCAGCAGATaGCAGTTCTTTCACTTAGAG +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFLVTSR*QFFHLE
Trigger: CTCTAAGTGAAAGAACTGTCATCTGCTGGTGACCAG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCGCCTGGTTTCTGAACTaGGTGAGGCAAATGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAAWFLN*VRQMWK
Trigger: CTTCCACATTTGCCTCACTCAGTTCAGAAACCAGGC...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGGAACAATGCACCACTTaGGTCCAGGAGCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKEQCTT*VQELPP
Trigger: TGGCGGGAGCTCCTGGACTCAAGTGGTGCATTGTTC...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCCTTTTAAGTTGAGATaGCGGAGAACTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFPFKLR*RRTGRP
Trigger: AGGCCTACCAGTTCTCCGGCATCTCAACTTAAAAGG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACGGGTCACAGCCCACCTaGAAGTTAGGATCTGTAACA +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYGSQPT*KLGSVT
Trigger: TGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCC...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACAGGATGGGCAATTATaGTTTGCTAAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAQDGQL*FAKAWA
Trigger: GGCCCAGGCCTTAGCAAAGCATAATTGCCCATCCTG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGAGGAAATGGAGGTTTTaGAAGGGACTTTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMRKWRF*KGLCGA
Trigger: TGCTCCACAAAGTCCCTTCCAAAACCTCCATTTCCT...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACCAGCATCTGACCCTCTaGACTGAGTCATTCGGTGTA +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYQHLTL*TESFGV
Trigger: TACACCGAATGACTCAGTCCAGAGGGTCAGATGCTG...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAGGAATGGCCTCCCTGTaGGAGACTCCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAGMASL*ETPGPA
Trigger: TGCCGGCCCCGGAGTCTCCCACAGGGAGGCCATTCC...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACCTAAGCAGTGGCTGCTaGCACAGGGAAAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYLSSGC*HRERCN
Trigger: ATTACACCTTTCCCTGTGCCAGCAGCCACTGCTTAG...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 72 bp TGGAGGCCAGTCAGCTTTTATGGACTTCAGTGCTATTaGCTCCAGTACCCTTTGAAATGCAGGGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WRPVSFYGLQCY*LQYPLKCRVSS
Trigger: TGAGCTGACCCTGCATTTCAAAGGGTACTGGAGCAAATAGCACTGAAGTCCATAAAAGCTGACTGGCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTACTTTGGAAGATCGTTaGATCAAAAGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFTLEDR*IKSPKL
Trigger: GAGCTTGGGGCTTTTGATTCAACGATCTTCCAAAGT...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTCCCAGCCAGAGAGACTaGGTAGTAGAGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTPSQRD*VVEFCR
Trigger: TCTGCAGAACTCTACTACTCAGTCTCTCTGGCTGGG...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTGGTAACCCTTTCAAGTaGGTTGCTGTCAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICGNPFK*VAVRSN
Trigger: ATTGGATCTGACAGCAACTCACTTGAAAGGGTTACC...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATATCTCACAGCAGCATCTaGCCCTCTGGACTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: MRRAFWVTAHLQVRICNISHSSI*PSGLSH
Trigger: ATGACTCAGTCCAGAGGGTCAGATGCTGCTGTGAGA...TATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCAAATGGCTACATTACTaGGAACCCAGACCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSKWLHY*EPRPKH
Trigger: GTGCTTGGGTCTGGGTTCTCAGTAATGTAGCCATTT...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGTGGTGTGACCTTTGGTaGCATCCCCAGCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKWCDLW*HPQPQQ
Trigger: CTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCA...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGTTTTCACTCTGTTATaGTGTCCCACTAGTATGCCT +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMVFTLL*CPTSMP
Trigger: AGGCATACTAGTGGGACATCATAACAGAGTGAAAAC...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGACTGAAATCTCAAGATaGAGGAAGGAGCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMTEISR*RKEPFG
Trigger: TCCAAATGGCTCCTTCCTTCATCTTGAGATTTCAGT...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTAGCGGGCCTGAGAAGTaGAAGCAGGATGGGCAATTA +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTSGPEK*KQDGQL
Trigger: TAATTGCCCATCCTGCTTTCACTTCTCAGGCCCGCT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGGCTTCTTTCTCAATaGACATCTGATCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYWLLSQ*TSDPRR
Trigger: CCTCCTGGGATCAGATGTGCATTGAGAAAGAAGCCA...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGCAGTTAACACAAGTGTaGTTAATTGATGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: NMWEAQETVERSGAKSQQQLTQV*LIDDGF
Trigger: AAAGCCATCATCAATTAAGCACACTTGTGTTAACTG...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACATTAAGCGATGTTTCTaGCATGAATATCAGGGGATT +
Preference number: 4 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHIKRCF*HEYQGI
Trigger: AATCCCCTGATATTCATGGCAGAAACATCGCTTAAT...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCGAATATTCGAGCAAGTaGAGTCCAGGGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAEYSSK*SPGGYD
Trigger: GTCATAACCCCCTGGACTGCACTTGCTCGAATATTC...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTAGCACAGTGAGTCCCTaGCCAGTTCCAGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTSTVSP*PVPGSN
Trigger: ATTGCTTCCTGGAACTGGGCAGGGACTCACTGTGCT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCAGGCTAGGATTGCTTaGTGGGTTTACCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFQARIA*WVYLML
Trigger: AAGCATTAGGTAAACCCACCAAGCAATCCTAGCCTG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTTTTCAGATTCCGTGCTaGGAAGTCTTTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFFQIPC*EVFGEL
Trigger: AAGTTCCCCAAAGACTTCCCAGCACGGAATCTGAAA...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACTTAATGGTGCTCTGCTaGGACAAGATAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYLMVLC*DKIGRR
Trigger: TCTCCTCCCTATCTTGTCCCAGCAGAGCACCATTAA...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACTCTATCTGCATTCAGTaGTTCAGGCCCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNSICIQ*FRPLSM
Trigger: CATGGACAGGGGCCTGAACCACTGAATGCAGATAGA...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACCCATTTGGAGGCCAATaGCAGCATCTTAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYPFGGQ*QHLRGK
Trigger: TTTGCCTCTAAGATGCTGCCATTGGCCTCCAAATGG...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAGGGACTCAATGGGTTaGTGCTGTCTAAGACTGGAT +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYRDSMG*CCLRLD
Trigger: ATCCAGTCTTAGACAGCACCAACCCATTGAGTCCCT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGCCAGTCAGCTTTTATaGACTTCAGTGCTATTTGCT +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMASQLL*TSVLFA
Trigger: AGCAAATAGCACTGAAGTCCATAAAAGCTGACTGGC...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCAGGTACTCAGAAGGGTaGTCTTGGAACAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRARYSEG*SWNKKC
Trigger: GCATTTCTTGTTCCAAGATCACCCTTCTGAGTACCT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGCTTAAATCAAGTGTCTaGAGGTTTCCTAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMLKSSV*RFPSFS
Trigger: GGAGAAACTAGGAAACCTTCAGACACTTGATTTAAG...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTGCTGAGGACATTCTTTaGATGCCTGACTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTAEDIL*MPDSGD
Trigger: GTCTCCAGAGTCAGGCATTCAAAGAATGTCCTCAGC...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAGAAAGAGCTTACCTGTaGCAGAATATGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAERAYL*QNMQGL
Trigger: GAGTCCCTGCATATTCTGTCACAGGTAAGCTCTTTC...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACAAGCTCCCTTTCTaGCTTTGTGGGGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICNKLPF*LCGVNL
Trigger: TAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTT...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTGCAGGGTCAGCTCACTaGGCTACATCGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTAGSAH*ATSCNN
Trigger: ATTATTGCACGATGTAGCTCAGTGAGCTGACCCTGC...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACTACTTTCAGATTCCGTaGTGGGAAGTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYYFQIP*WEVFGE
Trigger: TTCCCCAAAGACTTCCCAGCACGGAATCTGAAAGTA...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCAGGACATTCTTTGAATaGCTGACTCTGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRARTFFE*LTLETK
Trigger: CTTGGTCTCCAGAGTCAGGCATTCAAAGAATGTCCT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCAAGCTGTGGAATGCTTaGTGGTCTATAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAKLWNA*WSIERR
Trigger: TCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGAGCCTTCAAGTTTGTaGAGGTTTTCTTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMEPSSL*RFSLYH
Trigger: ATGGTACAAAGAAAACCTGCACAAACTTGAAGGCTC...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGTCATTCGGTGTACTTaGCTAGAAGGTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPVIRCT*LEGSLA
Trigger: AGCTAAAGAACCTTCTAGGCAAGTACACCGAATGAC...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCGACTCAATGGGTTGGTaGTGTCTAAGACTGGATTCT +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSDSMGW*CLRLDS
Trigger: AGAATCCAGTCTTAGACAGCACCAACCCATTGAGTC...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAACCTGTGACAGAATATaGAGGGACTCAATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLATCDRI*RDSMGW
Trigger: CCAACCCATTGAGTCCCTGCATATTCTGTCACAGGT...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGTTTAAGGTTTGCAAGTaGGACAGGTTTTTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMFKVCK*DRFLSC
Trigger: GCAACTCAAAAACCTGTCCCACTTGCAAACCTTAAA...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTGAAGATGCTGATTGCTaGTATCAAGGAAGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFEDADC*YQGSSK
Trigger: CTTACTGCTTCCTTGATACCAGCAATCAGCATCTTC...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACCTGTGGAATGCTTGCTaGTCTATAGAGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNLWNAC*SIERRP
Trigger: TGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAG...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGCCAGTGAAAAACATGTaGGAGGCCCAGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKPVKNM*EAQETV
Trigger: CACGGTTTCCTGGGCCTCCCACATGTTTTTCACTGG...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGTGCTGTACTAAGCAGTaGCTGCTGGCACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKCCTKQ*LLAQGK
Trigger: CTTTCCCTGTGCCAGCAGCCACTGCTTAGTACAGCA...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACAAGGAAGCAGTAAGTaGGATTCAGAACCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAQGSSK*DSEPEG
Trigger: TCCTTCAGGTTCTGAATCTCACTTACTGCTTCCTTG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACAGTCCAGGGGGTTATaGCTTAAATTAATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAQSRGL*LKLMVL
Trigger: GAGCACCATTAATTTAAGTCATAACCCCCTGGACTG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGAGATACAGGCCTGTGTaGGTATGGCCCTTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKRYRPV*VWPFKP
Trigger: AGGCTTAAAGGGCCATACTCACACAGGCCTGTATCT...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGAATTGCAAACTACACTaGTTGGAGAGTTGGACAAAT +
Preference number: 4 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMNCKLH*LESWTN
Trigger: ATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATT...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCTGGATTAAGAAAAGATaGTTCAGTGACTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSWIKKR*FSDLGP
Trigger: TGGGCCCAAGTCACTGAAGCATCTTTTCTTAATCCA...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCCTCAGGTTTAAGGTTTaGAAGTGGGACAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSLRFKV*KWDRFL
Trigger: CAAAAACCTGTCCCACTTGCAAACCTTAAACCTGAG...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTATGAGAAGAGCATTTTaGGTCACAGCCCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTMRRAF*VTAHLQ
Trigger: TTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp ATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAGGTGTAATTCTCTCCTaGGTTGTAGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MRRAFWVTAHLQVRICNIGVILS*VVGVAA
Trigger: AGCTGCAACTCCTACAACCCAGGAGAGAATTACACC...TATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 72 bp TTTTATGGACTTCAGTGCTATTTGCTCCAGTACCCTTaGAAATGCAGGGTCAGCTCACTGAGCTACATCGTG +
Preference number: 4 (lower is better)
Translates to: FYGLQCYLLQYP*KCRVSSLSYIV
Trigger: CACGATGTAGCTCAGTGAGCTGACCCTGCATTTCAAAGGGTACTGGAGCAAATAGCACTGAAGTCCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACCCTAATGCTTGGAGCTaGGAAATGGAATCAAACTGT +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNPNAWS*EMESNC
Trigger: ACAGTTTGATTCCATTTCTCAGCTCCAAGCATTAGG...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGTTCTCAATGCACATCTaGTCCCAGGAGGTGATGACT +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKFSMHI*SQEVMT
Trigger: AGTCATCACCTCCTGGGATCAGATGTGCATTGAGAA...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACGGAAATTGGCAGCACTaGTTTGACACAATTGATCGA +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNGNWQH*FDTIDR
Trigger: TCGATCAATTGTGTCAAATCAGTGCTGCCAATTTCC...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTCTTTCATTGTTAGTGTaGTGTAATTCACATCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICLSLLV*CNSHQR
Trigger: CCTCTGATGTGAATTACATCACACTAACAATGAAAG...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTGCTAGGATTGCTTGGTaGGTTTACCTAATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTARIAW*VYLMLG
Trigger: TCCAAGCATTAGGTAAACCCACCAAGCAATCCTAGC...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCATTTTTCCCAAGCTGTaGAATGCTTGCTGGTCTATA +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAIFPKL*NACWSI
Trigger: TATAGACCAGCAAGCATTCCACAGCTTGGGAAAAAT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACTGGCTTAAGTCTACATaGCTCATTTTTCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNWLKST*LIFPKL
Trigger: CAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCA...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGCTGAAAAGTCTGGTCTaGTCACCAGCAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKLKSLV*SPADDS
Trigger: ACTGTCATCTGCTGGTGACCAGACCAGACTTTTCAG...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACCCTTTCTGACTTTGTaGGGTGAATTTACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAPFLTL*GEFTVA
Trigger: AGCAACAGTAAATTCACCCCACAAAGTCAGAAAGGG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGGATTCCCTTTTAAGTTaGGATGCCGGAGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKDSLLS*DAGELV
Trigger: TACCAGTTCTCCGGCATCTCAACTTAAAAGGGAATC...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCTACCATGTTAAGAAATaGATATTCGAGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSYHVKK*IFEQVQ
Trigger: CTGCACTTGCTCGAATATTCATTTCTTAACATGGTA...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCATTTTATGGACTTCAGTaGTATTTGCTCCAGTACCCT +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAFYGLQ*YLLQYP
Trigger: AGGGTACTGGAGCAAATAGCACTGAAGTCCATAAAA...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTTTGGATATTCCCGTTTaGATTAAGAAAAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPLDIPV*IKKRCF
Trigger: GAAGCATCTTTTCTTAATCCAAACGGGAATATCCAA...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGAGCTCTGACAAATTGTaGGGGCTGATGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKSSDKL*GLMISF
Trigger: AAAGGAGATCATCAGCCCCCACAATTTGTCAGAGCT...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCAAGGAAGGAGCCATTTaGAGGCCAATGGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QQMTVLSLRAILLSTLICKEGAI*RPMAAS
Trigger: AGATGCTGCCATTGGCCTCCAAATGGCTCCTTCCTT...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTTGTCAGGGATTTCACTaGGACCTAAATTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTCQGFH*DLNFHS
Trigger: ACTGTGAAAATTTAGGTCTCAGTGAAATCCCTGACA...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCATCTGACTTTGTGGGGTaGATTTACTGTTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QQKPLLTKPALLCSQQLASDFVG*IYCCLK
Trigger: TTTTAAGCAACAGTAAATTCACCCCACAAAGTCAGA...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACAAGTTTTCCAGATTGTaGACTGGAATAAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNKFSRL*TGINSR
Trigger: TCTCGAGTTTATTCCAGTGCACAATCTGGAAAACTT...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCGCTAGCATGCAGGGATaGCTTCTTCCTCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: QQMTVLSLRAILLSTLICASMQG*LLPHFH
Trigger: GTGAAAATGAGGAAGAAGGCATCCCTGCATGCTAGC...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAGTACTAAGCAGTGGCTaGTGGCACAGGGAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAVLSSG*WHRERC
Trigger: ACACCTTTCCCTGTGCCAGCAGCCACTGCTTAGTAC...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCCATGTCAGGCTGTTGTaGCTTAAGTCTACATGGCTC +
Preference number: 4 (lower is better)
Translates to: QQMTVLSLRAILLSTLICHVRLL*LKSTWL
Trigger: GAGCCATGTAGACTTAAGCCACAACAGCCTGACATG...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCCTTATTTGCTTTCTCTaGAAACCTTCAGCACTAAAT +
Preference number: 4 (lower is better)
Translates to: RAFWVTAHLQVRICNIRALICFL*KPSALN
Trigger: ATTTAGTGCTGAAGGTTTCCAGAGAAAGCAAATAAG...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTTTTAAGCCTAAGTCATaGCATTGCTCTTTGTCTATC +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTFKPKS*HCSLSI
Trigger: GATAGACAAAGAGCAATGTCATGACTTAGGCTTAAA...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp ATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATATGGAGGAAATATGGTTaGTTCCAAGATACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: MRRAFWVTAHLQVRICNIWRKYG*FQDTSF
Trigger: AAAGCTTGTATCTTGGAAGCAACCATATTTCCTCCA...TATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTCTAAGCACACTTATTTaGTTTCTCTGGAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTLSTLI*FLWKPS
Trigger: TGAAGGTTTCCAGAGAAAGCAAATAAGTGTGCTTAG...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGAGGGCAGTATGTCTATaGGTTGGTAAATCAGCAATT +
Preference number: 4 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKRAVCL*VGKSAI
Trigger: AATTGCTGATTTACCAACCCATAGACATACTGCCCT...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCATCGAGGAGTTCTAGCTaGGGACATTCTTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMASRSSS*GHSLNA
Trigger: GGCATTCAAAGAATGTCCTCAGCTAGAACTCCTCGA...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR GCA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCCCCTTTCAAGTGAGTTaGTGTCAGATCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: QQMTVLSLRAILLSTLICPFQVS*CQIQFL
Trigger: CAAGAATTGGATCTGACAGCAACTCACTTGAAAGGG...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTTGGATTCTTAGAGTTTaGACCTTCCACATTTTACAT +
Preference number: 4 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTWILRV*TFHILH
Trigger: ATGTAAAATGTGGAAGGTCCAAACTCTAAGAATCCA...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCACATGGCACTTGTATTTaGGAGAGACAAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAHGTCI*ERQDKR
Trigger: TCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATG...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCTGTATCCAGTTAATCTaGCACCTAGTTAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: QQMTVLSLRAILLSTLICCIQLI*HLVKSK
Trigger: TTTGGATTTAACTAGGTGCCAGATTAACTGGATACA...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCATTCCAGATTGTGCACTaGAATAAACTCGAGATTGGA +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAFQIVH*NKLEIG
Trigger: TCCAATCTCGAGTTTATTCCAGTGCACAATCTGGAA...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR TCA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCACCTAAAATTGGTTATTaGACAGAACAATGCACCACT +
Preference number: 4 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAPKIGY*TEQCTT
Trigger: AGTGGTGCATTGTTCTGTTCAATAACCAATTTTAGG...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
3UTR CAA 72 bp CATCGTGCAATAATAACACATTTTTATAGGAGTAGCTaGTCAGAGCAGCAACAACATGCAATACATAAAACC +
Preference number: 4 (lower is better)
Translates to: HRAIITHFYRSS*SEQQQHAIHKT
Trigger: GGTTTTATGTATTGCATGTTGTTGCTGCTCTGACAAGCTACTCCTATAAAAATGTGTTATTATTGCACGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACATGTGGGAGGCCCAGGAAACCGTGGAGAGGTCAGGAGCTAAGAGTCAGCAGCAAGCTGTGGAATGCTaGCTGGTCTATAGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: NMWEAQETVERSGAKSQQQAVEC*LVYREE
Trigger: CTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTG...CTGCTGACTCTTAGCTCCTGACCTCTCCACGGTTTCCTGGGCCTCCCACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACGAAGGCCCTGGCAATTaGGCAGCCAGAGAGGTACTC +
Preference number: 5 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYEGPGN*AAREVL
Trigger: GAGTACCTCTCTGGCTGCCAAATTGCCAGGGCCTTC...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTGAGCTCCCGCCAAGCTaGTCTGGCAATCAAGACTTC +
Preference number: 5 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICELPPS*SGNQDF
Trigger: GAAGTCTTGATTGCCAGACAAGCTTGGCGGGAGCTC...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCAGAACAATGCACCACTaGAGTCCAGGAGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSRTMHH*SPGAPA
Trigger: GGCGGGAGCTCCTGGACTCAAGTGGTGCATTGTTCT...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACTCCGAGCCTTCAAGTTaGTGCAGGTTTTCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHSEPSS*CRFSLY
Trigger: GTACAAAGAAAACCTGCACAAACTTGAAGGCTCGGA...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTCAGGGACTCAATGGGTaGGTGCTGTCTAAGACTGGA +
Preference number: 5 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFQGLNG*VLSKTG
Trigger: TCCAGTCTTAGACAGCACCAACCCATTGAGTCCCTG...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTATGGGCAATTATGCTTaGCTAAGGCCTGGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICMGNYA*LRPGPL
Trigger: AAGGGGCCCAGGCCTTAGCAAAGCATAATTGCCCAT...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 90 bp CAGATCCAATTCTTGGAGTTGGGTGAAGCACTGAAATGTGGTGGATaGGATGTCAGAGAAGCGGTGTTCCTGCAGGTTGAGGCTCTCAAC +
Preference number: 5 (lower is better)
Translates to: QIQFLELGEALKCGG*DVREAVFLQVEALN
Trigger: GTTGAGAGCCTCAACCTGCAGGAACACCGCTTCTCTGACATCTCATCCACCACATTTCAGTGCTTCACCCAACTCCAAGAATTGGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp TGGAGACCAAGAGGCTCATTGTGGCTCAGGTTTAAGGTTTGCAAGTaGGACAGGTTTTTGAGTTGCAGACTGCAGCAGTCAGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WRPRGSLWLRFKVCK*DRFLSCRLQQSEAS
Trigger: AGAGGCTTCTGACTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACTTGCAAACCTTAAACCTGAGCCACAATGAGCCTCTTGGTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACAACTTTGGAAGATCGTaGAATCAAAAGCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHNFGRS*NQKPQA
Trigger: AGCTTGGGGCTTTTGATTCAACGATCTTCCAAAGTT...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCCGGTGTTCCTGCAGGTaGAGGCTCTCAACAGACATT +
Preference number: 5 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSRCSCR*RLSTDI
Trigger: AATGTCTGTTGAGAGCCTCAACCTGCAGGAACACCG...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTGTCCATGGCTGGTGTGACCTTTGGTGACATCCCCAGCCTCAACAGAAACCACGGAATAAACTCGAGATaGGATATTCCCGTTTGGATT +
Preference number: 5 (lower is better)
Translates to: LSMAGVTFGDIPSLNRNHGINSR*DIPVWI
Trigger: AATCCAAACGGGAATATCCAATCTCGAGTTTATTCC...GTGGTTTCTGTTGAGGCTGGGGATGTCACCAAAGGTCACACCAGCCATGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTTGTCAGATCCAATTCTaGGAGTTGGGTGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICCQIQF*ELGEAL
Trigger: CAGTGCTTCACCCAACTCCAAGAATTGGATCTGACA...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GAGTTGCAGCTCATGCAGAGAGTCCTCTGTGATGGAGGCCAGTCAGCTTTTATGGGGGTGAATTTACTGTaGCTTAAAACAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ELQLMQRVLCDGGQSAFMGVNLL*LKTEEL
Trigger: CAGCTCCTCTGTTTTAAGCAACAGTAAATTCACCCC...CATAAAAGCTGACTGGCCTCCATCACAGAGGACTCTCTGCATGAGCTGCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 90 bp GCTCATTGTGGCTCAGGTTTAAGGTTTGCAAGTGGGACAGGTTTTTaGGTTGCAGACTGCAGCAGTCAGAAGCCTCTATGTCATTATGGC +
Preference number: 5 (lower is better)
Translates to: AHCGSGLRFASGTGF*VADCSSQKPLCHYG
Trigger: GCCATAATGACATAGAGGCTTCTGACTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACTTGCAAACCTTAAACCTGAGCCACAATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAAAGTGGGACAGGTTTTaGAGTTGCAGACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAKWDRF*SCRLQQ
Trigger: CTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACTT...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACAGACCAAGAGGCTCATaGTGGCTCAGGTTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYRPRGS*WLRFKV
Trigger: AACCTTAAACCTGAGCCACAATGAGCCTCTTGGTCT...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCATTCAGCTCTGACAAATaGTGGGGGCTGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAFSSDK*WGLMIS
Trigger: GGAGATCATCAGCCCCCACAATTTGTCAGAGCTGAA...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAAATGAGAAGAGCATTTaGGGTCACAGCCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLANEKSI*GHSPPA
Trigger: TGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATT...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTCCACATTTTACATGGAATCATTTGGCTGGGAACCCTGAGCCAACCTCAGTCCACCCTCTCATGGCACTaGTATTTGGGAGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: FHILHGIIWLGTLSQPQSTLSWH*YLGETR
Trigger: TCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGT...GGACTGAGGTTGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAAATGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTGCTCCCTTTCTGACTTaGTGGGGTGAATTTACTGTT +
Preference number: 5 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICAPFLT*WGEFTV
Trigger: AACAGTAAATTCACCCCACAAAGTCAGAAAGGGAGC...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACTTGCTCCAGTACCCTTaGAAATGCAGGGTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNLLQYP*KCRVSS
Trigger: TGAGCTGACCCTGCATTTCAAAGGGTACTGGAGCAA...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGGACTTCAGTGCTATTaGCTCCAGTACCCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPGLQCY*LQYPLK
Trigger: TTTCAAAGGGTACTGGAGCAAATAGCACTGAAGTCC...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 90 bp ACCCTTTCAAGTGAGTTGCTGTCAGATCCAATTCTTGGAGTTGGGTaGAGCACTGAAATGTGGTGGATGAGATGTCAGAGAAGCGGTGTT +
Preference number: 5 (lower is better)
Translates to: TLSSELLSDPILGVG*STEMWWMRCQRSGV
Trigger: AACACCGCTTCTCTGACATCTCATCCACCACATTTCAGTGCTTCACCCAACTCCAAGAATTGGATCTGACAGCAACTCACTTGAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp AGGCTGTTGTGGCTTAAGTCTACATGGCTCATTTTTCCCAAGCTGTaGAATGCTTGCTGGTCTATAGAGAGGAGACCACAAGAGGACAAA +
Preference number: 5 (lower is better)
Translates to: RLLWLKSTWLIFPKL*NACWSIERRPQEDK
Trigger: TTTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp GAATCAATGCTGTCGCATGTCAGGCTGTTGTGGCTTAAGTCTACATaGCTCATTTTTCCCAAGCTGTGGAATGCTTGCTGGTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: ESMLSHVRLLWLKST*LIFPKLWNACWSIE
Trigger: CTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCTGACATGCGACAGCATTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTTCCAAGTTTTCCAGATaGTGCACTGGAATAAACTCG +
Preference number: 5 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPSKFSR*CTGINS
Trigger: CGAGTTTATTCCAGTGCACAATCTGGAAAACTTGGA...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCTTAGAGATGGCGGGTTaGCACACGTGGTCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: QQMTVLSLRAILLSTLICLEMAG*HTWSPP
Trigger: CGGAGGAGACCACGTGTGCAAACCCGCCATCTCTAA...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACTTTACATGGAATCATTaGGCTGGGAACCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNFTWNH*AGNPEP
Trigger: TGGCTCAGGGTTCCCAGCCAAATGATTCCATGTAAA...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 90 bp GTTGAGGCTCTCAACAGACATTTCACAGAGTCCCTTGAGCATGGCTaGACTAATATCTTCGTCATCAATGTCCTCAAATGTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VEALNRHFTESLEHG*TNIFVINVLKCSQP
Trigger: TGGCTGGGAACATTTGAGGACATTGATGACGAAGATATTAGTTCAGCCATGCTCAAGGGACTCTGTGAAATGTCTGTTGAGAGCCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 90 bp TGGCTTAAGTCTACATGGCTCATTTTTCCCAAGCTGTGGAATGCTTaGTGGTCTATAGAGAGGAGACCACAAGAGGACAAAATCAGAACC +
Preference number: 5 (lower is better)
Translates to: WLKSTWLIFPKLWNA*WSIERRPQEDKIRT
Trigger: GGTTCTGATTTTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp CTTAAGTCTACATGGCTCATTTTTCCCAAGCTGTGGAATGCTTGCTaGTCTATAGAGAGGAGACCACAAGAGGACAAAATCAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: LKSTWLIFPKLWNAC*SIERRPQEDKIRTS
Trigger: GGAGGTTCTGATTTTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACGAACAAGAAATGCTGTaGACTGCTCAGCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNEQEML*TAQHSV
Trigger: CACAGAATGCTGAGCAGTCAACAGCATTTCTTGTTC...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTAAGGAAATGGAGGTTTaGGAAGGGACTTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTKEMEV*EGTLWS
Trigger: GCTCCACAAAGTCCCTTCCAAAACCTCCATTTCCTT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CTTCTAAGAACCGGATGCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTTTTTATAGGAGTAGCTaGTCAGAGCAGCAACAACAT +
Preference number: 5 (lower is better)
Translates to: LLRTGCPNEKSILGHSPPFYRSS*SEQQQH
Trigger: ATGTTGTTGCTGCTCTGACAAGCTACTCCTATAAAA...AGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGCATCCGGTTCTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTTGGTGACATCCCCAGCCTCAACAGAAACCACTTCTCACTAAGCCAGCTTTACGGAATTTTACAGATATaGCCTGTGTTCAAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: FGDIPSLNRNHFSLSQLYGILQI*PVFKGC
Trigger: ACAGCCCTTGAACACAGGCAATATCTGTAAAATTCC...GTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTGAGGCTGGGGATGTCACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp TTAAGATGGCTAAGAGAATCAATGCTGTCGCATGTCAGGCTGTTGTaGCTTAAGTCTACATGGCTCATTTTTCCCAAGCTGTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: LRWLRESMLSHVRLL*LKSTWLIFPKLWNA
Trigger: AGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCTGACATGCGACAGCATTGATTCTCTTAGCCATCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp GCCCAAATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTCAGTTATATGTTTTGTaGGCTTCTTTCTCAATGCAC +
Preference number: 5 (lower is better)
Translates to: AQMRRAFWVTAHLQVRICQLYVL*ASFSMH
Trigger: GTGCATTGAGAAAGAAGCCAACAAAACATATAACTG...ACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCATTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACCTCAGTCCAACAGAATCTCAGTATCTGGGGGTGAGGCCTGGGAATCCATTTATTCCAAAAATTCTGTaGTGTTTGGTAGAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: NLSPTESQYLGVRPGNPFIPKIL*CLVECQ
Trigger: CTGACACTCTACCAAACACAACAGAATTTTTGGAAT...AAATGGATTCCCAGGCCTCACCCCCAGATACTGAGATTCTGTTGGACTGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGGCAAAGACCCTCTCATGGCACTTGTATTTGGGAGAGACAAGACAAGAGAAACATCCAATTCTTGGAGTaGGGTGAAGCACTGAAATGT +
Preference number: 5 (lower is better)
Translates to: RQRPSHGTCIWERQDKRNIQFLE*GEALKC
Trigger: ACATTTCAGTGCTTCACCCAACTCCAAGAATTGGAT...GTTTCTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGAGAGGGTCTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCATTGGCAGCACTGATTaGACACAATTGATCGAAATG +
Preference number: 5 (lower is better)
Translates to: RAFWVTAHLQVRICNIRAIGSTD*TQLIEM
Trigger: CATTTCGATCAATTGTGTCAAATCAGTGCTGCCAAT...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTTCATGGCACTTGTATTaGGGAGAGACAAGACAAGAG +
Preference number: 5 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTSWHLY*GETRQE
Trigger: CTCTTGTCTTGTCTCTCCCAAATACAAGTGCCATGA...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp AGATTCCGTGCTGGGAAGTCTTTGGGGAACTTAATGGAGGAAATATaGTTGCTTCCAAGATACAAGCTTTCCAAGTTTTCCAGATTGTGC +
Preference number: 5 (lower is better)
Translates to: RFRAGKSLGNLMEEI*LLPRYKLSKFSRLC
Trigger: GCACAATCTGGAAAACTTGGAAAGCTTGTATCTTGGAAGCAACCATATTTCCTCCATTAAGTTCCCCAAAGACTTCCCAGCACGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATAAGAGCCTTAACATTATTGCCATaGAAGTTCAGGCTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: RAFWVTAHLQVRICNIRALTLLP*KFRLRL
Trigger: CAACCTAAGCCTGAACTTCAATGGCAATAATGTTAA...GGCTCTTATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTACCCTTTCAAGTGAGTaGCTGTCAGATCCAATTCTT +
Preference number: 5 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTTLSSE*LSDPIL
Trigger: AAGAATTGGATCTGACAGCAACTCACTTGAAAGGGT...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCTCGCATGTCAGGCTGTaGTGGCTTAAGTCTACATGG +
Preference number: 5 (lower is better)
Translates to: QQMTVLSLRAILLSTLICSHVRL*WLKSTW
Trigger: CCATGTAGACTTAAGCCACAACAGCCTGACATGCGA...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp TCCAGATTGTGCACTGGAATAAACTCGAGATTGGATATTCCCGTTTaGATTAAGAAAAGATGCTTCAGTGACTTGGGCCCATTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: SRLCTGINSRLDIPV*IKKRCFSDLGPLSD
Trigger: ATCGCTTAATGGGCCCAAGTCACTGAAGCATCTTTTCTTAATCCAAACGGGAATATCCAATCTCGAGTTTATTCCAGTGCACAATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCAAAAATTCTGTTGTGTTaGGTAGAGTGTCAGGGATTT +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAKILLC*VECQGF
Trigger: AAATCCCTGACACTCTACCAAACACAACAGAATTTT...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACATATTAAAAATATATaGAATCTTGGCCGGGCACGA +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAHIKNI*NLGRAR
Trigger: TCGTGCCCGGCCAAGATTCAATATATTTTTAATATG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAACAGAAACCACTTCTCACTAAGCCAGCTTTACTGTGTTCCCAACAGCTAGCACAGTATGTCTATGGGTaGGTAAATCAGCAATTAGTA +
Preference number: 5 (lower is better)
Translates to: QQKPLLTKPALLCSQQLAQYVYG*VNQQLV
Trigger: TACTAATTGCTGATTTACCAACCCATAGACATACTG...TGCTAGCTGTTGGGAACACAGTAAAGCTGGCTTAGTGAGAAGTGGTTTCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 90 bp GGAATAAACTCGAGATTGGATATTCCCGTTTGGATTAAGAAAAGATaGTTCAGTGACTTGGGCCCATTAAGCGATGTTTCTGCCATGAAT +
Preference number: 5 (lower is better)
Translates to: GINSRLDIPVWIKKR*FSDLGPLSDVSAMN
Trigger: ATTCATGGCAGAAACATCGCTTAATGGGCCCAAGTCACTGAAGCATCTTTTCTTAATCCAAACGGGAATATCCAATCTCGAGTTTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp TTCACAGTTCTTCTGGAAAAGAGACTTCTAAGAACCGGATGCCCAAATGAGAAGATGGAGGAAATATGGTaGCTTCCAAGATACAAGCTT +
Preference number: 5 (lower is better)
Translates to: FTVLLEKRLLRTGCPNEKMEEIW*LPRYKL
Trigger: AAGCTTGTATCTTGGAAGCAACCATATTTCCTCCAT...CTTCTCATTTGGGCATCCGGTTCTTAGAAGTCTCTTTTCCAGAAGAACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCACGTGCTGGGAAGTCTTaGGGGAACTTAATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NIKIANYTDWRVGQIRMARAGKS*GNLMEE
Trigger: TTCCTCCATTAAGTTCCCCAAAGACTTCCCAGCACG...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp ATGAGAAGAGCATTTTGGGTCACAGCCCACCTGCAAGTTAGGATCTGTAACATATCACTTAGAGCAATTTaGCTAAGCACACTTATTTGC +
Preference number: 5 (lower is better)
Translates to: MRRAFWVTAHLQVRICNISLRAI*LSTLIC
Trigger: GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGA...TATGTTACAGATCCTAACTTGCAGGTGGGCTGTGACCCAAAATGCTCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp ATTGACAGCAGCCATCAACAAGCTCCCTTTCTGACTTTGTGGGGTGAATTTACTCGACAGTTTTCTGTCTaGGAATTTTACAGATATTGC +
Preference number: 5 (lower is better)
Translates to: IDSSHQQAPFLTLWGEFTRQFSV*EFYRYC
Trigger: GCAATATCTGTAAAATTCCAAGACAGAAAACTGTCG...AGTAAATTCACCCCACAAAGTCAGAAAGGGAGCTTGTTGATGGCTGCTGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCATTTCACAGAGTCCCTaGAGCATGGCTGAACTAATA +
Preference number: 5 (lower is better)
Translates to: QQMTVLSLRAILLSTLICISQSP*SMAELI
Trigger: TATTAGTTCAGCCATGCTCAAGGGACTCTGTGAAAT...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCCTGAGAACTAATTTCTaGAGCAAGTTCAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: QQMTVLSLRAILLSTLICLRTNF*SKFRPF
Trigger: GAAGGGTCTGAACTTGCTCAAGAAATTAGTTCTCAG...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp CAGCAGATGACAGTTCTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCTCAGCACTAAATGTGTaGGTATTTCCACCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: QQMTVLSLRAILLSTLICSALNV*VFPPEK
Trigger: CTTCTCAGGTGGAAATACCAACACATTTAGTGCTGA...GCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAGAACTGTCATCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 90 bp ATATGGTTGCTTCCAAGATACAAGCTTTCCAAGTTTTCCAGATTGTaGACTGGAATAAACTCGAGATTGGATATTCCCGTTTGGATTAAG +
Preference number: 5 (lower is better)
Translates to: IWLLPRYKLSKFSRL*TGINSRLDIPVWIK
Trigger: CTTAATCCAAACGGGAATATCCAATCTCGAGTTTATTCCAGTGCACAATCTGGAAAACTTGGAAAGCTTGTATCTTGGAAGCAACCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 90 bp CTTTCACTTAGAGCAATTTTGCTAAGCACACTTATTTGCTTTCTCTaGAAACCTTCAGCACTAAATGTGTTGGTATTTCCACCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LSLRAILLSTLICFL*KPSALNVLVFPPEK
Trigger: CTTCTCAGGTGGAAATACCAACACATTTAGTGCTGAAGGTTTCCAGAGAAAGCAAATAAGTGTGCTTAGCAAAATTGCTCTAAGTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAATCCCACAGGAAAGCTaGACATCAGATAGCTTAACT +
Preference number: 5 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAIPQES*TSDSLT
Trigger: AGTTAAGCTATCTGATGTCAAGCTTTCCTGTGGGAT...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS-3UTR CAA 90 bp AACATCAAAATTGCAAACTACACTGATTGGAGAGTTGGACAAATAAGAATGGCAGCTAAGCACACTTATTaGCTTTCTCTGGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: NIKIANYTDWRVGQIRMAAKHTY*LSLETF
Trigger: GAAGGTTTCCAGAGAAAGCAAATAAGTGTGCTTAGC...TGCCATTCTTATTTGTCCAACTCTCCAATCAGTGTAGTTTGCAATTTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 90 bp AGACAAATTTGGAGTTCCTCCAAAGTTCAAACTTTGGAAGATCGTTaGATCAAAAGCCCCAAGCTCAATACCTTTAACATTATTGCCATT +
Preference number: 5 (lower is better)
Translates to: RQIWSSSKVQTLEDR*IKSPKLNTFNIIAI
Trigger: AATGGCAATAATGTTAAAGGTATTGAGCTTGGGGCTTTTGATTCAACGATCTTCCAAAGTTTGAACTTTGGAGGAACTCCAAATTTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 90 bp CCGAGCGGCAATCGTACTTCTAGTAATCTTTACCAAATATACACTTaGCAAAAACAAGATGATGAATGCACATTGTTAACTGTAGTACTT +
Preference number: 5 (lower is better)
Translates to: PSGNRTSSNLYQIYT*QKQDDECTLLTVVL
Trigger: AAGTACTACAGTTAACAATGTGCATTCATCATCTTGTTTTTGGCAAGTGTATATTTGGTAAAGATTACTAGAAGTACGATTGCCGCTCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515027.1
CDS CCA 90 bp TTGAATATAACAGACAAATTTGGAGTTCCTCCAAAGTTCAAACTTTaGAAGATCGTTGAATCAAAAGCCCCAAGCTCAATACCTTTAACA +
Preference number: 5 (lower is better)
Translates to: LNITDKFGVPPKFKL*KIVESKAPSSIPLT
Trigger: TGTTAAAGGTATTGAGCTTGGGGCTTTTGATTCAACGATCTTCCAAAGTTTGAACTTTGGAGGAACTCCAAATTTGTCTGTTATATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp AGCCGGCAGAAAACAGCACCACCCAAAAGAAGCAGCTaGCGTCAAACGCCATCACAGGCTAGGATTGCTTGG +
Preference number: 6 (lower is better)
Translates to: SRQKTAPPKRSS*RQTPSQARIAW
Trigger: CCAAGCAATCCTAGCCTGTGATGGCGTTTGACGTCAGCTGCTTCTTTTGGGTGGTGCTGTTTTCTGCCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp GGTGCTCTGCTGGGACAAGATAGGGAGGAGACGGGGTaGGATGATGTTAATGCTGTTGGCAGCCAGATTGAG +
Preference number: 6 (lower is better)
Translates to: GALLGQDREETG*DDVNAVGSQIE
Trigger: CTCAATCTGGCTGCCAACAGCATTAACATCATCTCACCCCGTCTCCTCCCTATCTTGTCCCAGCAGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp GTGGATGAGATGTCAGAGAAGCGGTGTTCCTGCAGGTaGAGGCTCTCAACAGACATTTCACAGAGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: VDEMSEKRCSCR*RLSTDISQSPL
Trigger: CAAGGGACTCTGTGAAATGTCTGTTGAGAGCCTCAACCTGCAGGAACACCGCTTCTCTGACATCTCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp TTCTTGGAGTTGGGTGAAGCACTGAAATGTGGTGGATaGGATGTCAGAGAAGCGGTGTTCCTGCAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: FLELGEALKCGG*DVREAVFLQVE
Trigger: CTCAACCTGCAGGAACACCGCTTCTCTGACATCTCATCCACCACATTTCAGTGCTTCACCCAACTCCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp TTCAGACCCTTCATCCCAGAGGGTAACCCTTTCAAGTaGGTTGCTGTCAGATCCAATTCTTGGAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: FRPFIPEGNPFK*VAVRSNSWSWV
Trigger: CACCCAACTCCAAGAATTGGATCTGACAGCAACTCACTTGAAAGGGTTACCCTCTGGGATGAAGGGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 72 bp AATGTGGTGGATGAGATGTCAGAGAAGCGGTGTTCCTaGAGGTTGAGGCTCTCAACAGACATTTCACAGAGT +
Preference number: 6 (lower is better)
Translates to: NVVDEMSEKRCS*RLRLSTDISQS
Trigger: ACTCTGTGAAATGTCTGTTGAGAGCCTCAACCTGCAGGAACACCGCTTCTCTGACATCTCATCCACCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 72 bp AGAGGCTCATTGTGGCTCAGGTTTAAGGTTTGCAAGTaGGACAGGTTTTTGAGTTGCAGACTGCAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RGSLWLRFKVCK*DRFLSCRLQQS
Trigger: TGACTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACTTGCAAACCTTAAACCTGAGCCACAATGAGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 90 bp GGCTCATTGTGGCTCAGGTTTAAGGTTTGCAAGTGGGACAGGTTTTaGAGTTGCAGACTGCAGCAGTCAGAAGCCTCTATGTCATTATGG +
Preference number: 6 (lower is better)
Translates to: GSLWLRFKVCKWDRF*SCRLQQSEASMSLW
Trigger: CCATAATGACATAGAGGCTTCTGACTGCTGCAGTCTGCAACTCAAAAACCTGTCCCACTTGCAAACCTTAAACCTGAGCCACAATGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp GTCTACATGGCTCATTTTTCCCAAGCTGTGGAATGCTaGCTGGTCTATAGAGAGGAGACCACAAGAGGACAA +
Preference number: 6 (lower is better)
Translates to: VYMAHFSQAVEC*LVYREETTRGQ
Trigger: TTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 90 bp CCCTTAAGATGGCTAAGAGAATCAATGCTGTCGCATGTCAGGCTGTaGTGGCTTAAGTCTACATGGCTCATTTTTCCCAAGCTGTGGAAT +
Preference number: 6 (lower is better)
Translates to: PLRWLRESMLSHVRL*WLKSTWLIFPKLWN
Trigger: ATTCCACAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCTGACATGCGACAGCATTGATTCTCTTAGCCATCTTAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp AGTGAGTTGCTGTCAGATCCAATTCTTGGAGTTGGGTaGAGCACTGAAATGTGGTGGATGAGATGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: SELLSDPILGVG*STEMWWMRCQR
Trigger: TCTCTGACATCTCATCCACCACATTTCAGTGCTTCACCCAACTCCAAGAATTGGATCTGACAGCAACTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 72 bp TCTACATGGCTCATTTTTCCCAAGCTGTGGAATGCTTaGTGGTCTATAGAGAGGAGACCACAAGAGGACAAA +
Preference number: 6 (lower is better)
Translates to: STWLIFPKLWNA*WSIERRPQEDK
Trigger: TTTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 72 bp ACATGGCTCATTTTTCCCAAGCTGTGGAATGCTTGCTaGTCTATAGAGAGGAGACCACAAGAGGACAAAATC +
Preference number: 6 (lower is better)
Translates to: TWLIFPKLWNAC*SIERRPQEDKI
Trigger: GATTTTGTCCTCTTGTGGTCTCCTCTCTATAGACCAGCAAGCATTCCACAGCTTGGGAAAAATGAGCCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 72 bp CTAAGAGAATCAATGCTGTCGCATGTCAGGCTGTTGTaGCTTAAGTCTACATGGCTCATTTTTCCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LRESMLSHVRLL*LKSTWLIFPKL
Trigger: CAGCTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCTGACATGCGACAGCATTGATTCTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp TGGCTAAGAGAATCAATGCTGTCGCATGTCAGGCTGTaGTGGCTTAAGTCTACATGGCTCATTTTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: WLRESMLSHVRL*WLKSTWLIFPK
Trigger: CTTGGGAAAAATGAGCCATGTAGACTTAAGCCACAACAGCCTGACATGCGACAGCATTGATTCTCTTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 90 bp GTTGAATCAAAAGCCCCAAGCTCAATACCTTTAACATTATTGCCATaGAAGTTCAGGCTTAGGTTGATGGCCTGCTCCAGAGACCTCATG +
Preference number: 6 (lower is better)
Translates to: VESKAPSSIPLTLLP*KFRLRLMACSRDLM
Trigger: CATGAGGTCTCTGGAGCAGGCCATCAACCTAAGCCTGAACTTCAATGGCAATAATGTTAAAGGTATTGAGCTTGGGGCTTTTGATTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 90 bp TGTTCCTGCAGGTTGAGGCTCTCAACAGACATTTCACAGAGTCCCTaGAGCATGGCTGAACTAATATCTTCGTCATCAATGTCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: CSCRLRLSTDISQSP*SMAELISSSSMSSN
Trigger: ATTTGAGGACATTGATGACGAAGATATTAGTTCAGCCATGCTCAAGGGACTCTGTGAAATGTCTGTTGAGAGCCTCAACCTGCAGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 90 bp ACTATGAGAAAGAAAATGCCTATGGCTGTAATCCCACAGGAAAGCTaGACATCAGATAGCTTAACTCCCCTTAGAGATGGCGGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: TMRKKMPMAVIPQES*TSDSLTPLRDGGFA
Trigger: TGCAAACCCGCCATCTCTAAGGGGAGTTAAGCTATCTGATGTCAAGCTTTCCTGTGGGATTACAGCCATAGGCATTTTCTTTCTCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp AAAGCCCCAAGCTCAATACCTTTAACATTATTGCCATaGAAGTTCAGGCTTAGGTTGATGGCCTGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KAPSSIPLTLLP*KFRLRLMACSR
Trigger: TCTGGAGCAGGCCATCAACCTAAGCCTGAACTTCAATGGCAATAATGTTAAAGGTATTGAGCTTGGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp AGGTTGAGGCTCTCAACAGACATTTCACAGAGTCCCTaGAGCATGGCTGAACTAATATCTTCGTCATCAATG +
Preference number: 6 (lower is better)
Translates to: RLRLSTDISQSP*SMAELISSSSM
Trigger: CATTGATGACGAAGATATTAGTTCAGCCATGCTCAAGGGACTCTGTGAAATGTCTGTTGAGAGCCTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp AAGAAAATGCCTATGGCTGTAATCCCACAGGAAAGCTaGACATCAGATAGCTTAACTCCCCTTAGAGATGGC +
Preference number: 6 (lower is better)
Translates to: KKMPMAVIPQES*TSDSLTPLRDG
Trigger: GCCATCTCTAAGGGGAGTTAAGCTATCTGATGTCAAGCTTTCCTGTGGGATTACAGCCATAGGCATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 72 bp TGCACTGGAATAAACTCGAGATTGGATATTCCCGTTTaGATTAAGAAAAGATGCTTCAGTGACTTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: CTGINSRLDIPV*IKKRCFSDLGP
Trigger: TGGGCCCAAGTCACTGAAGCATCTTTTCTTAATCCAAACGGGAATATCCAATCTCGAGTTTATTCCAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp CTCAACAGACATTTCACAGAGTCCCTTGAGCATGGCTaGACTAATATCTTCGTCATCAATGTCCTCAAATGT +
Preference number: 6 (lower is better)
Translates to: LNRHFTESLEHG*TNIFVINVLKC
Trigger: ACATTTGAGGACATTGATGACGAAGATATTAGTTCAGCCATGCTCAAGGGACTCTGTGAAATGTCTGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 72 bp TCGAGATTGGATATTCCCGTTTGGATTAAGAAAAGATaGTTCAGTGACTTGGGCCCATTAAGCGATGTTTCT +
Preference number: 6 (lower is better)
Translates to: SRLDIPVWIKKR*FSDLGPLSDVS
Trigger: AGAAACATCGCTTAATGGGCCCAAGTCACTGAAGCATCTTTTCTTAATCCAAACGGGAATATCCAATCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp GGGAAGTCTTTGGGGAACTTAATGGAGGAAATATGGTaGCTTCCAAGATACAAGCTTTCCAAGTTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GKSLGNLMEEIW*LPRYKLSKFSR
Trigger: TCTGGAAAACTTGGAAAGCTTGTATCTTGGAAGCAACCATATTTCCTCCATTAAGTTCCCCAAAGACTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS GCA 72 bp CTTCCAAGATACAAGCTTTCCAAGTTTTCCAGATTGTaGACTGGAATAAACTCGAGATTGGATATTCCCGTT +
Preference number: 6 (lower is better)
Translates to: LPRYKLSKFSRL*TGINSRLDIPV
Trigger: AACGGGAATATCCAATCTCGAGTTTATTCCAGTGCACAATCTGGAAAACTTGGAAAGCTTGTATCTTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS TCA 72 bp TGGAGTTCCTCCAAAGTTCAAACTTTGGAAGATCGTTaGATCAAAAGCCCCAAGCTCAATACCTTTAACATT +
Preference number: 6 (lower is better)
Translates to: WSSSKVQTLEDR*IKSPKLNTFNI
Trigger: AATGTTAAAGGTATTGAGCTTGGGGCTTTTGATTCAACGATCTTCCAAAGTTTGAACTTTGGAGGAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CCA 72 bp AGAGTTCTGCAGACCATTGAATATAACAGACAAATTTaGAGTTCCTCCAAAGTTCAAACTTTGGAAGATCGT +
Preference number: 6 (lower is better)
Translates to: RVLQTIEYNRQI*SSSKVQTLEDR
Trigger: ACGATCTTCCAAAGTTTGAACTTTGGAGGAACTCCAAATTTGTCTGTTATATTCAATGGTCTGCAGAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5
CDS CAA 72 bp ATTTGCTTTCTCTGGAAACCTTCAGCACTAAATGTGTaGGTATTTCCACCTGAGAAGGTATTTAACTGCAAA +
Preference number: 6 (lower is better)
Translates to: ICFLWKPSALNV*VFPPEKVFNCK
Trigger: TTTGCAGTTAAATACCTTCTCAGGTGGAAATACCAACACATTTAGTGCTGAAGGTTTCCAGAGAAAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256447.5