Pregenerated sensors for CD177 (Homo sapiens)
Ensembl gene IDs: ENSG00000204936Ensembl transcript IDs: ENST00000378012.3, ENST00000607855.5, ENST00000618265.5
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGTACCTTTTCTATGTTTAGATGTGTGTAGATGCACAAATACTTaGCGTGGTGTTAAGATTGCCTGCAGTATTCACACCATAACATGC | + |
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Preference number: 1 (lower is better) Translates to: AVPFLCLDVCRCTNT*RGVKIACSIHTITC Trigger: GCATGTTATGGTGTGAATACTGCAGGCAATCTTAACACCACGGCAAGTATTTGTGCATCTACACACATCTAAACATAGAAAAGGTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618265.5 |
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| 3UTR CCA 72 bp | GATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTaGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: DGASEGRDSERG*EGLRNSPSVLS Trigger: GCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| 3UTR CCA 72 bp | AGCGTCCATCCTGGGTGTGTATTGGGCTGTACCATCTaGGTTGGTGTAAGTGCACGCTACAATGTTCCTATG | + |
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Preference number: 3 (lower is better) Translates to: SVHPGCVLGCTI*VGVSARYNVPM Trigger: CATAGGAACATTGTAGCGTGCACTTACACCAACCCAGATGGTACAGCCCAATACACACCCAGGATGGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618265.5 |
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| 3UTR GCA 72 bp | AGATGCACAAATACTTGCCGTGGTGTTAAGATTGCCTaGAGTATTCACACCATAACATGCACTGCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: RCTNTCRGVKIA*SIHTITCTAGL Trigger: CAAGCCTGCAGTGCATGTTATGGTGTGAATACTGCAGGCAATCTTAACACCACGGCAAGTATTTGTGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618265.5 |
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| 3UTR GCA 72 bp | TTTCTATGTTTAGATGTGTGTAGATGCACAAATACTTaGCGTGGTGTTAAGATTGCCTGCAGTATTCACACC | + |
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Preference number: 3 (lower is better) Translates to: FLCLDVCRCTNT*RGVKIACSIHT Trigger: GGTGTGAATACTGCAGGCAATCTTAACACCACGGCAAGTATTTGTGCATCTACACACATCTAAACATAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618265.5 |
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| 3UTR GCA 72 bp | TATGCTGTACCTTTTCTATGTTTAGATGTGTGTAGATaGACAAATACTTGCCGTGGTGTTAAGATTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: YAVPFLCLDVCR*TNTCRGVKIAC Trigger: GCAGGCAATCTTAACACCACGGCAAGTATTTGTGCATCTACACACATCTAAACATAGAAAAGGTACAGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618265.5 |
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| CDS-3UTR GCA 90 bp | GGTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCCCTCCCGCAGGCACCTaGTGGGGGCTGTGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRDSERGWEGLRNSPSVLPPAGT*WGLWGP Trigger: TGGGCCCCACAGCCCCCAGCAGGTGCCTGCGGGAGG...GAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAGGGATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTGGGAGGGACACCTGCTGGGGGCTGTaGGGCCCAAAGCGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGGMEPARVGIASEGGRDTCWGL*GPKREG Trigger: TCCCTCCCGCTTTGGGCCCCACAGCCCCCAGCAGGT...GTCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATCCCTCCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR GCA 90 bp | GTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCACCGGGGCCCATCCGGTaGTCAGTGACGCGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGIASEGGRDSVTAPLCSPGPIR*SVTRGS Trigger: GGAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGG...TGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | GAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATCCCCTGGGGCTCCTGGTCCTTaGCCTCCGTGCAGCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ERGWEGLRNSPSVLSGSPGAPGP*PPCSPW Trigger: CCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCC...AGGGGATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | AGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATCCGTGACGCGGGGCTCCTaGTCCTTGGCCTCCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SERGWEGLRNSPSVLSGSVTRGS*SLASVQ Trigger: CTGCACGGAGGCCAAGGACCAGGAGCCCCGCGTCAC...GGATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR GCA 90 bp | AGGGGAGGGATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTGGGAGGGACTTCTTAGGGGTCCATTaGCGGGGCAGGTCGGACACC | + |
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Preference number: 4 (lower is better) Translates to: RGGMEPARVGIASEGGRDFLGVH*RGRSDT Trigger: GGTGTCCGACCTGCCCCGGCAATGGACCCCTAAGAA...GTCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATCCCTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR TCA 90 bp | ATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATCCATCCGGTGCTCAGTaGCGCGGGGCTCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: IASEGGRDSVTAPLCSADPSGAQ*RGAPGP Trigger: AGGACCAGGAGCCCCGCGTCACTGAGCACCGGATGG...ATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | GGTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCCAGCGCCTGCACTCCTaGCAGTGGGAGGATGAACCC | + |
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Preference number: 4 (lower is better) Translates to: GRDSERGWEGLRNSPSVLQRLHS*QWEDEP Trigger: GGGTTCATCCTCCCACTGCCAGGAGTGCAGGCGCTG...GAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAGGGATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTGGGAGGGACAGCACCAGGCTCACTTaGGGTCCGCTCTCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RGGMEPARVGIASEGGRDSTRLT*GPLSMS Trigger: GCTCATTGAGAGCGGACCCCAAGTGAGCCTGGTGCT...GTCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATCCCTCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR TCA 90 bp | AGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATCCGGGGTCCGCTCTCAATaGGCATCAACGTGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SERGWEGLRNSPSVLSGSGVRSQ*ASTCPG Trigger: GCCAGGACACGTTGATGCTCATTGAGAGCGGACCCC...GGATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | GGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGAGCATCAACGTGTCCTaGCACCCCAAGCCGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GIASEGGRDSVTAPLCSASINVS*HPKPLS Trigger: CGACAGCGGCTTGGGGTGCCAGGACACGTTGATGCT...CGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | GATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGACTGCACTCCTGGCAGTaGGAGGATGAACCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DSERGWEGLRNSPSVLSGLHSWQ*EDEPQE Trigger: CTCCTGGGGTTCATCCTCCCACTGCCAGGAGTGCAG...TCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CCA 90 bp | GTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCACCTCCGTGCAGCCCTTaGAGAGCACCAGGCTCACTT | + |
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Preference number: 4 (lower is better) Translates to: VGIASEGGRDSVTAPLCSPPCSP*RAPGSL Trigger: AAGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGG...TGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR GCA 90 bp | GGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGTAACAGCCCCTCTGTaGTCAGCGGATCCCCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: GIASEGGRDSVTAPLCSAVTAPL*SADPLL Trigger: TAGAAGGGGATCCGCTGAGCACAGAGGGGCTGTTAC...CGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR TCA 90 bp | ATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATACCTTCCACACATGCTaGACTGTCCCAAACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IASEGGRDSVTAPLCSADTFHTC*TVPNWQ Trigger: CTGCCAGTTTGGGACAGTTCAGCATGTGTGGAAGGT...ATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS CCA 90 bp | AGGGAGAGGCCGGGGCCCATCCGGTGCTCAGTGACGCGGGGCTCCTaGTCCTTGGCCTCCGTGCAGCCCTTGGAGAGCACCAGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: RERPGPIRCSVTRGS*SLASVQPLESTRLT Trigger: AGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGGCCTCTCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS-3UTR CAA 90 bp | CGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCCGGGGCTCCTGGTCCTaGGCCTCCGTGCAGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RDSERGWEGLRNSPSVLSRGSWS*ASVQPL Trigger: CAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCG...GCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS TCA 90 bp | AGGTGTAGGAGATCAGGGAGAGGCCGGGGCCCATCCGGTGCTCAGTaGCGCGGGGCTCCTGGTCCTTGGCCTCCGTGCAGCCCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: RCRRSGRGRGPSGAQ*RGAPGPWPPCSPWR Trigger: TCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGGCCTCTCCCTGATCTCCTACACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CCA 90 bp | CCTCCCTCTCCTCCCGACCCTCCCGCAGGCACCTGCTGGGGGCTGTaGGGCCCAAAGCGGGAGGGAGTTAACGAGGTTGTTGCAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: PPSPPDPPAGTCWGL*GPKREGVNEVVAEV Trigger: GACTTCTGCAACAACCTCGTTAACTCCCTCCCGCTTTGGGCCCCACAGCCCCCAGCAGGTGCCTGCGGGAGGGTCGGGAGGAGAGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CAA 90 bp | CAGGGGAGGGATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTGGGAGGGAGAGCACCAGGCTCACTaGGGGTCCGCTCTCAATGAG | + |
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Preference number: 5 (lower is better) Translates to: QGRDGASEGRDSERGWEGEHQAH*GSALNE Trigger: CTCATTGAGAGCGGACCCCAAGTGAGCCTGGTGCTC...TCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATCCCTCCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CAA 90 bp | GGTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCGCCTCCGTGCAGCCCTaGGAGAGCACCAGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: GRDSERGWEGLRNSPSVLASVQP*ESTRLT Trigger: AGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGGC...GAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CAA 90 bp | ATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCTCAGCGGATGTTCTTAGGGGTCCATaGCCGGGGCAGGTCGGACAC | + |
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Preference number: 5 (lower is better) Translates to: IASEGGRDSVTAPLCSADVLRGP*PGQVGH Trigger: GTGTCCGACCTGCCCCGGCAATGGACCCCTAAGAAC...ATCCGCTGAGCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CAA 90 bp | AGGGGAGGGATGGAGCCAGCGAGGGTCGGGATAGCGAGCGAGGGTGGGAGGGACAGGGAGTTAACGAGGTaGTTGCAGAAGTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RGGMEPARVGIASEGGRDRELTR*LQKSSW Trigger: CCAGGAGGACTTCTGCAACAACCTCGTTAACTCCCT...GTCCCTCCCACCCTCGCTCGCTATCCCGACCCTCGCTGGCTCCATCCCTCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS-3UTR CAA 90 bp | AGGGTCGGGATAGCGAGCGAGGGTGGGAGGGACTCCGTAACAGCCCCTCTGTGCGAGTTAACGAGGTTGTaGCAGAAGTCCTCCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RVGIASEGGRDSVTAPLCELTRL*QKSSWR Trigger: CCGCCAGGAGGACTTCTGCAACAACCTCGTTAACTC...GCACAGAGGGGCTGTTACGGAGTCCCTCCCACCCTCGCTCGCTATCCCGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607855.5 |
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| CDS TCA 90 bp | TTAGGGGTCCATTGCCGGGGCAGGTCGGACACCTTCCACACATGCTaGACTGTCCCAAACTGGCAGAGCAGCGCCTGCACTCCTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LGVHCRGRSDTFHTC*TVPNWQSSACTPGS Trigger: ACTGCCAGGAGTGCAGGCGCTGCTCTGCCAGTTTGGGACAGTTCAGCATGTGTGGAAGGTGTCCGACCTGCCCCGGCAATGGACCCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CCA 72 bp | CCGGGGCCCATCCGGTGCTCAGTGACGCGGGGCTCCTaGTCCTTGGCCTCCGTGCAGCCCTTGGAGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: PGPIRCSVTRGS*SLASVQPLEST Trigger: GGTGCTCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CCA 72 bp | CGCGGGGCTCCTGGTCCTTGGCCTCCGTGCAGCCCTTaGAGAGCACCAGGCTCACTTGGGGTCCGCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RGAPGPWPPCSP*RAPGSLGVRSQ Trigger: TTGAGAGCGGACCCCAAGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CAA 72 bp | ACGCGGGGCTCCTGGTCCTTGGCCTCCGTGCAGCCCTaGGAGAGCACCAGGCTCACTTGGGGTCCGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TRGSWSLASVQP*ESTRLTWGPLS Trigger: TGAGAGCGGACCCCAAGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CAA 90 bp | TGCTCAGTGACGCGGGGCTCCTGGTCCTTGGCCTCCGTGCAGCCCTaGGAGAGCACCAGGCTCACTTGGGGTCCGCTCTCAATGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: CSVTRGSWSLASVQP*ESTRLTWGPLSMSI Trigger: GATGCTCATTGAGAGCGGACCCCAAGTGAGCCTGGTGCTCTCCAAGGGCTGCACGGAGGCCAAGGACCAGGAGCCCCGCGTCACTGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CAA 72 bp | CAAGCCGCTGTCGCAGCTGGTGTTCTTAGGGGTCCATaGCCGGGGCAGGTCGGACACCTTCCACACATGCTG | + |
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Preference number: 6 (lower is better) Translates to: QAAVAAGVLRGP*PGQVGHLPHML Trigger: CAGCATGTGTGGAAGGTGTCCGACCTGCCCCGGCAATGGACCCCTAAGAACACCAGCTGCGACAGCGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CAA 72 bp | GGCTGTGGGGCCCAAAGCGGGAGGGAGTTAACGAGGTaGTTGCAGAAGTCCTCCTGGCGGCACACGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GCGAQSGRELTR*LQKSSWRHTKV Trigger: CACCTTCGTGTGCCGCCAGGAGGACTTCTGCAACAACCTCGTTAACTCCCTCCCGCTTTGGGCCCCACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS TCA 72 bp | CATTGCCGGGGCAGGTCGGACACCTTCCACACATGCTaGACTGTCCCAAACTGGCAGAGCAGCGCCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: HCRGRSDTFHTC*TVPNWQSSACT Trigger: AGTGCAGGCGCTGCTCTGCCAGTTTGGGACAGTTCAGCATGTGTGGAAGGTGTCCGACCTGCCCCGGCAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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| CDS CCA 72 bp | ACTTGGGGTCCGCTCTCAATGAGCATCAACGTGTCCTaGCACCCCAAGCCGCTGTCGCAGCTGGTGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: TWGPLSMSINVS*HPKPLSQLVFL Trigger: TAAGAACACCAGCTGCGACAGCGGCTTGGGGTGCCAGGACACGTTGATGCTCATTGAGAGCGGACCCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378012.3 ENST00000607855.5 ENST00000618265.5 |
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