RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD163L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177675

Ensembl transcript IDs: ENST00000313599.8, ENST00000416109.2, ENST00000539726.5, ENST00000542055.5, ENST00000543276.1, ENST00000543841.5, ENST00000544331.1, ENST00000545597.1, ENST00000545926.1, ENST00000546182.1

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGGGTGTCATCTGAGGTTCTTGTCCCATGTGGGTCCTCTCTCTTaGGGCAGGTCTCCATCTCATGGAATAAATTCTCCTCGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: WGCHLRFLSHVGPLS*GRSPSHGINSPREN
Trigger: GTTCTCTCGAGGAGAATTTATTCCATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCACATGGGACAAGAACCTCAGATGACACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR CCA 90 bp GGAGGCAGGAATGATGAGGAATTAATAAGCAGTAATGCGGCTCAGTaGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTACCTGCAGCAG +
Preference number: 1 (lower is better)
Translates to: GGRNDEELISSNAAQ*PIQCKGMLSAYLQQ
Trigger: CTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGAGCCGCATTACTGCTTATTAATTCCTCATCATTCCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR CCA 90 bp CTTGTCCCATGTGGGTCCTCTCTCTTGAGGCAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGAGAACCCCTCCTTCTGGTTGAAAAT +
Preference number: 1 (lower is better)
Translates to: LVPCGSSLLRQVSIS*NKFSSREPLLLVEN
Trigger: ATTTTCAACCAGAAGGAGGGGTTCTCTCGAGGAGAATTTATTCCATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCACATGGGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR TCA 90 bp ATTCAGTGCAAAGGGATGCTCTCTGCTTACCTGCAGCAGAAAAACTaGTCACACTGTAGGATTTCCCTAGTTCCTTTGACCGCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: IQCKGMLSAYLQQKN*SHCRISLVPLTAAL
Trigger: AAGAGCAGCGGTCAAAGGAACTAGGGAAATCCTACAGTGTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR CCA 90 bp TACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTaGTGGAAGCGAGCCCAGATTCTTCCTGTTAGGGATTGTGGGAAA +
Preference number: 1 (lower is better)
Translates to: YKDPCETVSSMNKSL*WKRAQILPVRDCGK
Trigger: TTTCCCACAATCCCTAACAGGAAGAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR TCA 90 bp GTTTTCAGGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATaGACAAGTCTCTCTGGTGGAAGCGAGCCCAGATTCTTCCTGTTA +
Preference number: 1 (lower is better)
Translates to: VFRTSTKILAKPYLP*TSLSGGSEPRFFLL
Trigger: TAACAGGAAGAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR CCA 90 bp AGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTCGCTACTTCACAACCATGGTTaGGGGTGTCATCTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: SHFVASEAGRTPNSDVSLLHNHG*GCHLRF
Trigger: GAACCTCAGATGACACCCCCAACCATGGTTGTGAAG...TAGCGACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR-3UTR GCA 90 bp CAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAAGCGCAGTGGCCTATTCAGTaGAAAGGGATGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: QRSLRNRIFHEQVSLVEAQWPIQ*KGMLSA
Trigger: AGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTG...CGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR CCA 90 bp ACTCCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTTGGGGGTGTCACAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGA +
Preference number: 2 (lower is better)
Translates to: TPNSDVSLASSQPWLGVSQVSIS*NKFSSR
Trigger: TCTCGAGGAGAATTTATTCCATGAGATGGAGACCTG...TGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTGGGTCCTCTCTCTTaGGGCAGGTCTCCATCTCAT +
Preference number: 2 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSVGPLS*GRSPSH
Trigger: ATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCAC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR-3UTR TCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGCGCTGCTCTTCATGGTaGGTTTTCAACTTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLRCSSW*VFNLLG
Trigger: ACCCAGCAAGTTGAAAACTCACCATGAAGAGCAGCG...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR GCA 90 bp CAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAAGCGCAAAGGGATGCTCTCTaGTTACCTGCAGCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: QRSLRNRIFHEQVSLVEAQRDAL*LPAAEK
Trigger: TTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTG...CGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR GCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGTTCAGTGCAAAGGGATaGTCTCTGCTTACCTGCAGC +
Preference number: 2 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLFSAKG*SLLTCS
Trigger: GCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAA...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGGTTCTTGTCCCATGTaGGTCCTCTCTCTTGAGGCA +
Preference number: 2 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGGSCPM*VLSLEA
Trigger: TGCCTCAAGAGAGAGGACCCACATGGGACAAGAACC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR-3UTR GCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGTGCTCTCTGCTTACCTaGAGCAGAAAAACTGATCAC +
Preference number: 2 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLCSLLT*SRKTDH
Trigger: GTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCA...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR CAA 90 bp GTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTCGCTAGCATCTTCATGTCATCTGAGGTTCTaGTCCCATGTGGGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: VASEAGRTPNSDVSLASSCHLRF*SHVGPL
Trigger: GAGAGGACCCACATGGGACAAGAACCTCAGATGACA...TGAAGATGCTAGCGACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR CCA 72 bp CCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAGGTTCTTGTCCCATGT +
Preference number: 3 (lower is better)
Translates to: PNSDVSLASSQP*LGVSSEVLVPC
Trigger: ACATGGGACAAGAACCTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR CCA 72 bp TGTGGGTCCTCTCTCTTGAGGCAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGAGAACCCCTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: CGSSLLRQVSIS*NKFSSREPLLL
Trigger: CAGAAGGAGGGGTTCTCTCGAGGAGAATTTATTCCATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546182.1
3UTR GCA 72 bp GTAATGCGGCTCAGTGGCCTATTCAGTGCAAAGGGATaGTCTCTGCTTACCTGCAGCAGAAAAACTGATCAC +
Preference number: 3 (lower is better)
Translates to: VMRLSGLFSAKG*SLLTCSRKTDH
Trigger: GTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGAGCCGCATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR CCA 72 bp CCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTaGTGGAAGCGAGCCCAGATTCTTCCTGTTAGGGAT +
Preference number: 3 (lower is better)
Translates to: PCETVSSMNKSL*WKRAQILPVRD
Trigger: ATCCCTAACAGGAAGAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR TCA 72 bp GATTTCCCTAGTTCCTTTGACCGCTGCTCTTCATGGTaGGTTTTCAACTTGCTGGGTCAGGAGGGCTTAACA +
Preference number: 3 (lower is better)
Translates to: DFPSSFDRCSSW*VFNLLGQEGLT
Trigger: TGTTAAGCCCTCCTGACCCAGCAAGTTGAAAACTCACCATGAAGAGCAGCGGTCAAAGGAACTAGGGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR GCA 72 bp GGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTACCTaGAGCAGAAAAACTGATCACACTGTAGGATTTCCC +
Preference number: 3 (lower is better)
Translates to: GLFSAKGCSLLT*SRKTDHTVGFP
Trigger: GGGAAATCCTACAGTGTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR CCA 72 bp TGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTaGAAGCGAGCCCAGATTCTTCCTGTTAGGGATTGT +
Preference number: 3 (lower is better)
Translates to: CETVSSMNKSLW*KRAQILPVRDC
Trigger: ACAATCCCTAACAGGAAGAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR TCA 72 bp ACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATaGACAAGTCTCTCTGGTGGAAGCGAGCCCAGATTC +
Preference number: 3 (lower is better)
Translates to: TSTKILAKPYLP*TSLSGGSEPRF
Trigger: GAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR GCA 72 bp TTAATAAGCAGTAATGCGGCTCAGTGGCCTATTCAGTaGAAAGGGATGCTCTCTGCTTACCTGCAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: LISSNAAQWPIQ*KGMLSAYLQQK
Trigger: TTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGAGCCGCATTACTGCTTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR TCA 72 bp AAAGGGATGCTCTCTGCTTACCTGCAGCAGAAAAACTaGTCACACTGTAGGATTTCCCTAGTTCCTTTGACC +
Preference number: 3 (lower is better)
Translates to: KGMLSAYLQQKN*SHCRISLVPLT
Trigger: GGTCAAAGGAACTAGGGAAATCCTACAGTGTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR CCA 72 bp AATGATGAGGAATTAATAAGCAGTAATGCGGCTCAGTaGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTAC +
Preference number: 3 (lower is better)
Translates to: NDEELISSNAAQ*PIQCKGMLSAY
Trigger: GTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGAGCCGCATTACTGCTTATTAATTCCTCATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
3UTR-3UTR CAA 90 bp GCTGTAATATCTAGGCTAGCAGTTTTCAGGACAAGTACAAAGATCCTTGCGAAAATTTCCCTAGTTCCTTaGACCGCTGCTCTTCATGGT +
Preference number: 3 (lower is better)
Translates to: AVISRLAVFRTSTKILAKISLVP*TAALHG
Trigger: ACCATGAAGAGCAGCGGTCAAAGGAACTAGGGAAAT...TTTCGCAAGGATCTTTGTACTTGTCCTGAAAACTGCTAGCCTAGATATTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp TCCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTTGGGGGTGTCATCGTGGGTCCTCTCTCTTaGGGCAGGTCTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SQQRCVASIFTTMVGGVIVGPLS*GRSPSH
Trigger: ATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCAC...GATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATGCCTGCAGTCGTGCTaGCCCCAGCCGCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLCLQSC*PQPREG
Trigger: CCCTTCCCGCGGCTGGGGGCAGCACGACTGCAGGCA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACCGAGCAGCGGTTGCTaGCGCCCACCAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGPSSGC*RPPASG
Trigger: GCCTGAGGCTGGTGGGCGGCAGCAACCGCTGCTCGG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATGCCTGCAGTCGTGCTaGCCCCAGCCGCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGCLQSC*PQPREG
Trigger: CCCTTCCCGCGGCTGGGGGCAGCACGACTGCAGGCA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
3UTR CAA 72 bp AACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTaGGGGGTGTCATCTGAGGTTCTTGTCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: NSDVSLASSQPW*GVSSEVLVPCG
Trigger: CCCACATGGGACAAGAACCTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTTGTGCCTGCAGTCGTaGTGCCCCCAGCCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSLCLQS*CPQPRE
Trigger: TTCCCGCGGCTGGGGGCAGCACGACTGCAGGCACAA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATTGTGCCTGCAGTCGTaGTGCCCCCAGCCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLCLQS*CPQPRE
Trigger: TTCCCGCGGCTGGGGGCAGCACGACTGCAGGCACAA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp CCTTTGACCGCTGCTCTTCATGGTGAGTTTTCAACTTGCTGGGTCAGGAGGGCTTTCAGTGCAAAGGGATaGTCTCTGCTTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLTAALHGEFSTCWVRRAFSAKG*SLLTCS
Trigger: GCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAA...AGCCCTCCTGACCCAGCAAGTTGAAAACTCACCATGAAGAGCAGCGGTCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCCGAGCAGCGGTTGCTaGCGCCCACCAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLPSSGC*RPPASG
Trigger: GCCTGAGGCTGGTGGGCGGCAGCAACCGCTGCTCGG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTGGGTGTCACACAGTaGGCCCCAGTGTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVGVTQ*APVSKH
Trigger: GTGCTTGGACACTGGGGCTCACTGTGTGACACCCAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTGGGTGTCACACAGTaGGCCCCAGTGTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSVGVTQ*APVSKH
Trigger: GTGCTTGGACACTGGGGCTCACTGTGTGACACCCAC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGACCCCTCCCCAAAGTaGGCAGAGACCGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLDPSPK*AETVAL
Trigger: CAATGCCACGGTCTCTGCTCACTTTGGGGAGGGGTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACTGCTATGGCTGTGGTaGTGTTCCTCCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLLWLW*CSSCRR
Trigger: GCGTCGGCAGGAGGAACATCACCACAGCCATAGCAG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTGCTATGGCTGTGGTaGTGTTCCTCCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSLLWLW*CSSCRR
Trigger: GCGTCGGCAGGAGGAACATCACCACAGCCATAGCAG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACCGCGGGAAGGGCACTaGCACAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLPREGH*HKWDSI
Trigger: AATGGAGTCCCACTTGTGGCAGTGCCCTTCCCGCGG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCCTCCTGCCGACGCTaGCCCAGGTCCCGTTATAGA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSSCRR*PRSRYR
Trigger: TCTATAACGGGACCTGGGGCAGCGTCGGCAGGAGGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCCCCACAGCCCAGCTaGCTGCACACAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSPQPS*LHTMPA
Trigger: AGCAGGCATTGTGTGCAGGCAGCTGGGCTGTGGGGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp CTAGTTCCTTTGACCGCTGCTCTTCATGGTGAGTTTTCAACTTGCTGGGTCAGGAGTAATGCGGCTCAGTaGCCTATTCAGTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LVPLTAALHGEFSTCWVRSNAAQ*PIQCKG
Trigger: CCCTTTGCACTGAATAGGCCACTGAGCCGCATTACT...CCTGACCCAGCAAGTTGAAAACTCACCATGAAGAGCAGCGGTCAAAGGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCCCCATTCCCGGTGTTaGCATTCCCAGAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSPHSRC*HSQRAD
Trigger: GTCAGCTCTCTGGGAATGTCAACACCGGGAATGGGG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGGCAAGCCAGCGAAGTaGAGTGCGGTTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGGKPAK*SAVPHP
Trigger: GGGATGTGGAACCGCACTTCACTTCGCTGGCTTGCC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGGGCTGCCTGTGGGCTaGGCAGATCAAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSGLPVG*ADQTCF
Trigger: GAAGCAAGTTTGATCTGCTCAGCCCACAGGCAGCCC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGGTCCTCTCTCTTaGGGCAGGTCTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLVGPLS*GRSPSH
Trigger: ATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCAC...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp TTGCTGGGTCAGGAGGGCTTAACATCACCCACATATCAAGATTCTGGTGAGCCCAAACCGTATCTTCCATaGACAAGTCTCTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLGQEGLTSPTYQDSGEPKPYLP*TSLSGG
Trigger: TCCACCAGAGAGACTTGTTCATGGAAGATACGGTTT...GGGCTCACCAGAATCTTGATATGTGGGTGATGTTAAGCCCTCCTGACCCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACAGCCCAGCTGCCTaGACACAATGCCTGCTATGG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHSPAA*TQCLLW
Trigger: CCATAGCAGGCATTGTGTGCAGGCAGCTGGGCTGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGGGCACTGCCACAAGTaGGACTCCATTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLGHCHK*DSIPVQ
Trigger: CTGCACAGGAATGGAGTCCCACTTGTGGCAGTGCCC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TCCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTTGGGGGTGTCATCCAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: SQQRCVASIFTTMVGGVIQVSIS*NKFSSR
Trigger: TCTCGAGGAGAATTTATTCCATGAGATGGAGACCTG...GATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR CCA 90 bp GAGGGCTTAACATCACCCACATATCAAGATTCTGGTGAGCCCTGGAAGTCTAAAGGTTCTTGTCCCATGTaGGTCCTCTCTCTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGLTSPTYQDSGEPWKSKGSCPM*VLSLEA
Trigger: TGCCTCAAGAGAGAGGACCCACATGGGACAAGAACC...TTTAGACTTCCAGGGCTCACCAGAATCTTGATATGTGGGTGATGTTAAGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp TCTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTGGTTCTTGTCCCATGTaGGTCCTCTCTCTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SKVILWLQRQEELPTAMCGSCPM*VLSLEA
Trigger: TGCCTCAAGAGAGAGGACCCACATGGGACAAGAACC...ACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR CCA 90 bp CTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTCCTTCACAACCATGGTTaGGGGTGTCATCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LKSFCGFRGRKNSQQRCVLHNHG*GCHLRF
Trigger: GAACCTCAGATGACACCCCCAACCATGGTTGTGAAG...GACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR CCA 90 bp CTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTCGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LKSFCGFRGRKNSQQRCVASSQP*LGVSSE
Trigger: CTCAGATGACACCCCCAACCATGGTTGTGAAGATGC...GACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTGCCCCACCGTCCTTaGAAGTACACCTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVPHRP*KYTSSL
Trigger: AAGACTGGAGGTGTACTTTCAAGGACGGTGGGGCAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGGGCTGCCTGTGGGCTaGGCAGATCAAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGGLPVG*ADQTCF
Trigger: GAAGCAAGTTTGATCTGCTCAGCCCACAGGCAGCCC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCAAGGCTGTGAATTCTaGGCAGATGACCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSQGCEF*ADDPCV
Trigger: GACGCAGGGGTCATCTGCTCAGAATTCACAGCCTTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAACCCCTCCTTCTGGTTaGAACTCTGAGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLTPPSG*NSEGQM
Trigger: CATCTGCCCCTCAGAGTTTCAACCAGAAGGAGGGGT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTGGGTCCTCTCTCTTaGGGCAGGTCTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVGPLS*GRSPSH
Trigger: ATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCCAGCGAAGTGAAGTaGGGTTCCACATCCCAACTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLASEVK*GSTSQL
Trigger: CAGTTGGGATGTGGAACCGCACTTCACTTCGCTGGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACTTTTCCAGCACACCTaGTGCTTCCACCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLFQHT*CFHPQA
Trigger: GGCTTGTGGGTGGAAGCAGCAGGTGTGCTGGAAAAG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGGGACTCCATTCCTGTaGAGTTCAGGTCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSGTPFL*SSGHPA
Trigger: GGCTGGATGACCTGAACTGCACAGGAATGGAGTCCC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGGGACTCCATTCCTGTaGAGTTCAGGTCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLGTPFL*SSGHPA
Trigger: GGCTGGATGACCTGAACTGCACAGGAATGGAGTCCC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTGTCATCCAGCCAAATaGGGCGCAATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSCHPAK*GAIQQG
Trigger: GCCCTGCTGTATTGCGCCCCATTTGGCTGGATGACA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAGCCTGGGCTGCCTGTaGGCTGAGCAGATCAAACTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSLGCL*AEQIKL
Trigger: AAGTTTGATCTGCTCAGCCCACAGGCAGCCCAGGCT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGGGCACTGCCACAAGTaGGACTCCATTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGGHCHK*DSIPVQ
Trigger: CTGCACAGGAATGGAGTCCCACTTGTGGCAGTGCCC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACCAGGTCTCTTCTGCTaGGCTGGAGATTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLPGLFC*AGDSSL
Trigger: GAGCGAAGAATCTCCAGCCCAGCAGAAGAGACCTGG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTATGGTTCCAGTTCCCTaGCCAAACGAAGCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSMVPVP*PNEASL
Trigger: GAGGGACGCTTCGTTTGGCCAGGGAACTGGAACCAT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAGGGACCGTCTCCATTaGCCAGCCTCAACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLRDRLH*PASTPN
Trigger: ATTTGGAGTTGAGGCTGGTCAATGGAGACGGTCCCT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATTTGCACACGACAGTTaGGGCAGTAGTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLFAHDS*GSSVPP
Trigger: GGGTGGAACACTACTGCCTCAACTGTCGTGTGCAAA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACCTCCACTCTCCCTaGACAGGAGTTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHLHSP*TGVVSI
Trigger: GATGGAAACAACTCCTGTTCAGGGAGAGTGGAGGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACCTCCACTCTCCCTaGACAGGAGTTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHLHSP*TGVVSI
Trigger: GATGGAAACAACTCCTGTTCAGGGAGAGTGGAGGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGGCAAGCCAGCGAAGTaGAGTGCGGTTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLGKPAK*SAVPHP
Trigger: GGGATGTGGAACCGCACTTCACTTCGCTGGCTTGCC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGACTGCCAAAGACGCTaGACGGACATCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGDCQRR*TDILAA
Trigger: AGCAGCTAGGATGTCCGTTCAGCGTCTTTGGCAGTC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGTGCCCCACCGTCCTTaGAAGTACACCTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGVPHRP*KYTSSL
Trigger: AAGACTGGAGGTGTACTTTCAAGGACGGTGGGGCAC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCTCTCTGGAGACCCTaGTTGCAGACCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLALWRP*LQTHIQ
Trigger: TTGAATGTGGGTCTGCAATCAGGGTCTCCAGAGAGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTCCAAGCACGTTaGTCTCCACTTGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSVQAR*SPLARH
Trigger: GTGACGGGCAAGTGGAGATCAACGTGCTTGGACACT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTTTTCCTCCTGTGGTTaGGAGAGCAGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSFSSCG*ESSPTA
Trigger: AGCTGTGGGACTGCTCTCTCAACCACAGGAGGAAAA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAATAAAGGGGCGAGGCTaGCAACTCCATTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGIKGRG*QLHSPH
Trigger: GTGGGGAGAATGGAGTTGTCAGCCTCGCCCCTTTAT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACCCCAGGGTTTGGCGTaGCAGTCCCATAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGPQGLA*QSHRND
Trigger: GTCATTTCTATGGGACTGTCACGCCAAACCCTGGGG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp GCTGTAATATCTAGGCTAGCAGTTTTCAGGACAAGTACAAAGATCCTTGCGAAAACCCCTCCTTCTGGTTaGAACTCTGAGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AVISRLAVFRTSTKILAKTPPSG*NSEGQM
Trigger: CATCTGCCCCTCAGAGTTTCAACCAGAAGGAGGGGT...TTTCGCAAGGATCTTTGTACTTGTCCTGAAAACTGCTAGCCTAGATATTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGATGGACATCCTAGTTaGCTGCACACCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGDGHPS*LHTTAA
Trigger: TGCTGCCGTGGTGTGCAGGCAACTAGGATGTCCATC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCCAGCGAAGTGAAGTaGGGTTCCACATCCCAACTG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGASEVK*GSTSQL
Trigger: CAGTTGGGATGTGGAACCGCACTTCACTTCGCTGGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGCTACACACCACAGCTaGAGCTTTACTGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSATHHS*SFTVPA
Trigger: GGCTGGAACAGTAAAGCTGCAGCTGTGGTGTGTAGC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATTCCAGCACACCTGCTaGTTCCACCCACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGFQHTC*FHPQAS
Trigger: TGAGGCTTGTGGGTGGAAGCAGCAGGTGTGCTGGAA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCCTCCTGCCGACGCTaGCCCAGGTCCCGTTATAGA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSSCRR*PRSRYR
Trigger: TCTATAACGGGACCTGGGGCAGCGTCGGCAGGAGGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCCCCACAGCCCAGCTaGCTGCACACAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSPQPS*LHTMPA
Trigger: AGCAGGCATTGTGTGCAGGCAGCTGGGCTGTGGGGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGGGGCAGACAGGCACTaGCATATGGAGATATGCGTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLGADRH*HMEICV
Trigger: AACGCATATCTCCATATGGCAGTGCCTGTCTGCCCC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TCAGTGGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTACCTGCAGCAGAAAAATGCTCTCTGCTTACCTaGAGCAGAAAAACTGATCAC +
Preference number: 4 (lower is better)
Translates to: SVAYSVQRDALCLPAAEKCSLLT*SRKTDH
Trigger: GTGATCAGTTTTTCTGCTGCAGGTAAGCAGAGAGCA...TTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGCCTGGGCTGCCTGTaGGCTGAGCAGATCAAACTT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSLGCL*AEQIKL
Trigger: AAGTTTGATCTGCTCAGCCCACAGGCAGCCCAGGCT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACATGGAAACAGTGGCTaGGTCAGGCTTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGHGNSG*VRLPVQ
Trigger: CTGCACAGGAAGCCTGACCCAGCCACTGTTTCCATG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATCTCTTCTGCTGGGCTaGAGATTCTTCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSLLLG*RFFAPM
Trigger: CATGGGAGCGAAGAATCTCCAGCCCAGCAGAAGAGA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAATGGTTCCAGTTCCCTaGCCAAACGAAGCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGMVPVP*PNEASL
Trigger: GAGGGACGCTTCGTTTGGCCAGGGAACTGGAACCAT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCTGTCCCCAGGGTTTaGCGTGACAGTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSVPRV*RDSPIE
Trigger: TTCTATGGGACTGTCACGCCAAACCCTGGGGACAGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGGTTCTTGTCCCATGTaGGTCCTCTCTCTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLGSCPM*VLSLEA
Trigger: TGCCTCAAGAGAGAGGACCCACATGGGACAAGAACC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGCTTCACAACCATGGTTaGGGGTGTCATCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLLHNHG*GCHLRF
Trigger: GAACCTCAGATGACACCCCCAACCATGGTTGTGAAG...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp TACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAAGGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: YKDPCETVSSMNKSLWWKASSQP*LGVSSE
Trigger: CTCAGATGACACCCCCAACCATGGTTGTGAAGATGC...CTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp GTTCTTGTCCCATGTGGGTCCTCTCTCTTGAGGCAGGTCTCCATCTCATGGAATTCTAAAGTCATTTTGTaGCTTCAGAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLVPCGSSLLRQVSISWNSKVIL*LQRQEE
Trigger: TTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA...ATTCCATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCACATGGGACAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGGGACCGTCTCCATTaGCCAGCCTCAACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGRDRLH*PASTPN
Trigger: ATTTGGAGTTGAGGCTGGTCAATGGAGACGGTCCCT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCCCCATTCCCGGTGTTaGCATTCCCAGAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLPHSRC*HSQRAD
Trigger: GTCAGCTCTCTGGGAATGTCAACACCGGGAATGGGG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTACAACATCAGACCCTaGCTGCAAATGAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSYNIRP*LQMRQA
Trigger: GGCTTGCCTCATTTGCAGTCAGGGTCTGATGTTGTA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTTCTTTCTGTGAAATaGGGCTCTCTGGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSVLSVK*GSLETL
Trigger: CAGGGTCTCCAGAGAGCCTCATTTCACAGAAAGAAC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATTTTCCTCCTGTGGTTaGGAGAGCAGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGFSSCG*ESSPTA
Trigger: AGCTGTGGGACTGCTCTCTCAACCACAGGAGGAAAA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TCTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTAGATGTTTTTGTTTCTaGACTCGGCACCACGTGAGA +
Preference number: 4 (lower is better)
Translates to: SKVILWLQRQEELPTAMCRCFCF*TRHHVR
Trigger: TCTCACGTGGTGCCGAGTTCAGAAACAAAAACATCT...ACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR TCA 90 bp GAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAAGCGAGCCCAGATTCTTTTCTGGTTGAAACTCTaGGGGGCAGATGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: ETVSSMNKSLWWKRAQILFWLKL*GADVFV
Trigger: AACAAAAACATCTGCCCCTCAGAGTTTCAACCAGAA...AAGAATCTGGGCTCGCTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp TTTCAACTTGCTGGGTCAGGAGGGCTTAACATCACCCACATATCAAGATTCTGGCTGCAGCAGAAAAACTaGTCACACTGTAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: FQLAGSGGLNITHISRFWLQQKN*SHCRIS
Trigger: GGAAATCCTACAGTGTGATCAGTTTTTCTGCTGCAG...CCAGAATCTTGATATGTGGGTGATGTTAAGCCCTCCTGACCCAGCAAGTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGACATCCAAGCTGTTTaGACACGACAGTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLDIQAV*TRQLRQ
Trigger: CTGCCTCAACTGTCGTGTGCAAACAGCTTGGATGTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGACATCCTAGTTGCCTaGACACCACGGCAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGDILVA*TPRQQY
Trigger: ATACTGCTGCCGTGGTGTGCAGGCAACTAGGATGTC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCTGCAATTCCAGAGTaGCAACTCATTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSAIPE*QLIPLA
Trigger: TGCCAGGGGAATGAGTTGGCACTCTGGAATTGCAGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCCCATCCACGATGTCTaGAATTCCAGAGTGCCAACT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSPIHDV*NSRVPT
Trigger: AGTTGGCACTCTGGAATTGCAGACATCGTGGATGGG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACATCCCAACTGCTTaGATACGACATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHIPTA*IRHQLQ
Trigger: CTGCAGCTGATGTCGTATGCAAGCAGTTGGGATGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACATCCCAACTGCTTaGATACGACATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHIPTA*IRHQLQ
Trigger: CTGCAGCTGATGTCGTATGCAAGCAGTTGGGATGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAGGCTTCCCCTCCAGTaGAGCCAGAATTCGACATTA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLRLPLQ*SQNSTL
Trigger: TAATGTCGAATTCTGGCTGCACTGGAGGGGAAGCCT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAACGTTGATCTCCACTTaGCCGTCACACTGGGATTTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLTLIST*PSHWDL
Trigger: CAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAGCAGATCAAAGCACTaGCCTCTGGAACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSRSKH*PLELQT
Trigger: TGTCTGCAGTTCCAGAGGGCAGTGCTTTGATCTGCT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCCTGCACACAATGCCTaGTATGGCTGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSPAHNA*YGCGDV
Trigger: AACATCACCACAGCCATAGCAGGCATTGTGTGCAGG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCACAGCCCAGCTGCCTaGACACAATGCCTGCTATGG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLHSPAA*TQCLLW
Trigger: CCATAGCAGGCATTGTGTGCAGGCAGCTGGGCTGTG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATTGTTCCACTTATGGTaGCATACGGTCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLFHLW*HTVPHL
Trigger: AAGGTGGGGGACCGTATGCCACCATAAGTGGAACAA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCATTGTTCCACTTATaGTGGCATACGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGALFHL*WHTVPH
Trigger: GTGGGGGACCGTATGCCACCATAAGTGGAACAATGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGATGGGCAGTCCAGCTaGCTACACACCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLDGQSS*LHTTAA
Trigger: TGCAGCTGTGGTGTGTAGCCAGCTGGACTGCCCATC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGCCAATGATAGAAGATaGGCAGTCCAGCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSANDRR*AVQLAT
Trigger: TGTAGCCAGCTGGACTGCCCATCTTCTATCATTGGC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCTCTTCTGCTGGGCTaGAGATTCTTCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSLLLG*RFFAPM
Trigger: CATGGGAGCGAAGAATCTCCAGCCCAGCAGAAGAGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTGTCATCCAACCAGATaGTTCCAGTTCCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSCHPTR*FQFPGQ
Trigger: TTGGCCAGGGAACTGGAACCATCTGGTTGGATGACA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTTCACAACCATGGTTaGGGGTGTCATCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSLHNHG*GCHLRF
Trigger: GAACCTCAGATGACACCCCCAACCATGGTTGTGAAG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLASSQP*LGVSSE
Trigger: CTCAGATGACACCCCCAACCATGGTTGTGAAGATGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGAAGACAGTCAAAATTaGCGGTTCCGGAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLEDSQN*RFRNVC
Trigger: GCAGACATTCCGGAACCGTCAATTTTGACTGTCTTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTCCACCACTGTTCATaGATTCTCACCTCTACTCTC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVHHCS*ILTSTL
Trigger: GAGAGTAGAGGTGAGAATTCATGAACAGTGGTGGAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCCATGTTGCATCACCTaGGCAGGTTACAATCACATC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSPCCIT*AGYNHI
Trigger: GATGTGATTGTAACCTGCTCAGGTGATGCAACATGG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATCATTCCCTAAGCAATaGAACCTGTGTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSFPKQ*NLCPHT
Trigger: TGTGTGGGGACACAGGTTTCATTGCTTAGGGAATGA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCAAGGCTGTGAATTCTaGGCAGATGACCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLQGCEF*ADDPCV
Trigger: GACGCAGGGGTCATCTGCTCAGAATTCACAGCCTTG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCATAAAGGGGCGAGGCTaGCAACTCCATTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLIKGRG*QLHSPH
Trigger: GTGGGGAGAATGGAGTTGTCAGCCTCGCCCCTTTAT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTGCGTTTTAGGACACTaGATGTCATCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSCVLGH*MSSTHM
Trigger: CATGTGGGTGGATGACATTCAGTGTCCTAAAACGCA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAAGAGATGTTTTTGTTTCTaGACTCGGCACCACGTGAGA +
Preference number: 4 (lower is better)
Translates to: YKDPCETVSSMNKSLWWKRCFCF*TRHHVR
Trigger: TCTCACGTGGTGCCGAGTTCAGAAACAAAAACATCT...CTTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCACCCCTCCTTCTGGTTaGAACTCTGAGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLTPPSG*NSEGQM
Trigger: CATCTGCCCCTCAGAGTTTCAACCAGAAGGAGGGGT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp GAGGTTGATCTGGTGAGCCCTGGAAGTCTAAAGTCATTTTGTGGCTTCAGAGGCACCCCTCCTTCTGGTTaGAAATTTTATACAATCCTA +
Preference number: 4 (lower is better)
Translates to: EVDLVSPGSLKSFCGFRGTPPSG*KFYTIL
Trigger: TAGGATTGTATAAAATTTTCAACCAGAAGGAGGGGT...GCCTCTGAAGCCACAAAATGACTTTAGACTTCCAGGGCTCACCAGATCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGATGGACATCCTAGTTaGCTGCACACCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLDGHPS*LHTTAA
Trigger: TGCTGCCGTGGTGTGCAGGCAACTAGGATGTCCATC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCTGCAATTCCAGAGTaGCAACTCATTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSAIPE*QLIPLA
Trigger: TGCCAGGGGAATGAGTTGGCACTCTGGAATTGCAGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAACGGACATCCTAGCTaGTTACAAACCACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLNGHPS*LQTTRA
Trigger: AGCCCTTGTGGTTTGTAAGCAGCTAGGATGTCCGTT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACAGCTGCATTCCTTGTaGTCCATCTGTCATGACACA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLQLHSL*SICHDT
Trigger: TGTGTCATGACAGATGGAGCACAAGGAATGCAGCTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCAGCTGCATTCCTTGTaGTCCATCTGTCATGACACA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSQLHSL*SICHDT
Trigger: TGTGTCATGACAGATGGAGCACAAGGAATGCAGCTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATCTGGAGACCCTGATTaGAGACCCACATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSGDPD*RPTFKL
Trigger: CAACTTGAATGTGGGTCTGCAATCAGGGTCTCCAGA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCTGGAGACCCTGATTaGAGACCCACATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSGDPD*RPTFKL
Trigger: CAACTTGAATGTGGGTCTGCAATCAGGGTCTCCAGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGGCTTCCCCTCCAGTaGAGCCAGAATTCGACATTA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGRLPLQ*SQNSTL
Trigger: TAATGTCGAATTCTGGCTGCACTGGAGGGGAAGCCT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAACGTTGATCTCCACTTaGCCGTCACACTGGGATTTG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGTLIST*PSHWDL
Trigger: CAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATGGGTCAGATACATTTaGGAGGCATGGAAACAGTGG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLWVRYI*EAWKQW
Trigger: CCACTGTTTCCATGCCTCGCAAATGTATCTGACCCA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAACTGCCCTCTGGAACTaGAGACAAATATGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLTALWN*RQIWVR
Trigger: TCTGACCCATATTTGTCTGCAGTTCCAGAGGGCAGT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGCAGATCAAAGCACTaGCCTCTGGAACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSRSKH*PLELQT
Trigger: TGTCTGCAGTTCCAGAGGGCAGTGCTTTGATCTGCT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACCTGCACACAATGCCTaGTATGGCTGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGPAHNA*YGCGDV
Trigger: AACATCACCACAGCCATAGCAGGCATTGTGTGCAGG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGCAAAGGGATGCTCTCTaGTTACCTGCAGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLQRDAL*LPAAEK
Trigger: TTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTG...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR GCA 90 bp GCTGTAATATCTAGGCTAGCAGTTTTCAGGACAAGTACAAAGATCCTTGCGAAACAGTGGCCTATTCAGTaGAAAGGGATGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AVISRLAVFRTSTKILAKQWPIQ*KGMLSA
Trigger: AGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTG...TTTCGCAAGGATCTTTGTACTTGTCCTGAAAACTGCTAGCCTAGATATTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTTCCCCACCTTTCTTaGAATTTCACCTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVPHLS*NFTSTL
Trigger: GAGAGTGGAGGTGAAATTCCAAGAAAGGTGGGGAAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTGTCATCCAGCCAAATaGGGCGCAATACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLCHPAK*GAIQQG
Trigger: GCCCTGCTGTATTGCGCCCCATTTGGCTGGATGACA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATTGTTCCACTTATGGTaGCATACGGTCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGLFHLW*HTVPHL
Trigger: AAGGTGGGGGACCGTATGCCACCATAAGTGGAACAA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTATTCCCACGGCACCCTaGACATTCACCTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSIPTAP*TFTSTF
Trigger: AAAAGTTGAGGTGAATGTCCAGGGTGCCGTGGGAAT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAATTCCCACGGCACCCTaGACATTCACCTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLIPTAP*TFTSTF
Trigger: AAAAGTTGAGGTGAATGTCCAGGGTGCCGTGGGAAT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACCAACTTCTCTGCTGTaGATACAAGTGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLPTSLL*IQVSSG
Trigger: TCCGGAAGACACTTGTATCCACAGCAGAGAAGTTGG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTACTTGCCCGTCACACTaGGATTTGCCATTCACAAGT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSTCPSH*DLPFTS
Trigger: ACTTGTGAATGGCAAATCCCAGTGTGACGGGCAAGT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGAGACAGTATTTCCATaGATACAGGGAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSETVFP*IQGGAP
Trigger: TGGAGCACCTCCCTGTATCCATGGAAATACTGTCTC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCATGGAAACAGTGGCTaGGTCAGGCTTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLHGNSG*VRLPVQ
Trigger: CTGCACAGGAAGCCTGACCCAGCCACTGTTTCCATG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATGTCATCCAACCAGATaGTTCCAGTTCCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGCHPTR*FQFPGQ
Trigger: TTGGCCAGGGAACTGGAACCATCTGGTTGGATGACA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTTCAACTTGCTGGGTCAGGAGGGCTTAACATCACCCACATATCAAGATTCTGGCAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: FQLAGSGGLNITHISRFWQVSIS*NKFSSR
Trigger: TCTCGAGGAGAATTTATTCCATGAGATGGAGACCTG...CCAGAATCTTGATATGTGGGTGATGTTAAGCCCTCCTGACCCAGCAAGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGASSQP*LGVSSE
Trigger: CTCAGATGACACCCCCAACCATGGTTGTGAAGATGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCCTCAAACCCAGATTaGCTTCACCTTGCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGASNPD*LHLAFL
Trigger: TAGGAAGGCAAGGTGAAGCCAATCTGGGTTTGAGGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAGGAGGCAGGAATGATGAGGAATTAATAAGCAGTAATGCGGCTCAGTGGCCTGATTCTGGTGAGCCCTaGAAGTCTAAAGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: KGGRNDEELISSNAAQWPDSGEP*KSKVIL
Trigger: CAAAATGACTTTAGACTTCCAGGGCTCACCAGAATC...AGGCCACTGAGCCGCATTACTGCTTATTAATTCCTCATCATTCCTGCCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTATATGCCACGAGTTTTaGGGCAGCATCATTATGGGT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSICHEF*GSIIMG
Trigger: ACCCATAATGATGCTGCCTCAAAACTCGTGGCATAT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGAAGACAGTCAAAATTaGCGGTTCCGGAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGEDSQN*RFRNVC
Trigger: GCAGACATTCCGGAACCGTCAATTTTGACTGTCTTC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACCTCTACTCTCCCTaGACAATTGTTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHLYSP*TIVTSI
Trigger: GATGGAAGTAACAATTGTTCAGGGAGAGTAGAGGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTAATTACTCCAGCATCTaGTCTTCGGAAGCATGTTCG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSNYSSI*SSEACS
Trigger: CGAACATGCTTCCGAAGATCAGATGCTGGAGTAATT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGTGTCTTCCGGATGTTaGACAATGGGGCATAATGCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGVSSGC*TMGHNA
Trigger: TGCATTATGCCCCATTGTTCAACATCCGGAAGACAC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATTCTATCTTCACATGTaGTCCAGGTCTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLFYLHM*SRSLLL
Trigger: CAGCAGAAGAGACCTGGATCACATGTGAAGATAGAA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTAGATGTTTTTGTTTCTaGACTCGGCACCACGTGAGA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSRCFCF*TRHHVR
Trigger: TCTCACGTGGTGCCGAGTTCAGAAACAAAAACATCT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAGATGTTTTTGTTTCTaGACTCGGCACCACGTGAGA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLRCFCF*TRHHVR
Trigger: TCTCACGTGGTGCCGAGTTCAGAAACAAAAACATCT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTAATTCAGGAGCAGGATaGAAGTTACCACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSNSGAG*KLPQQR
Trigger: TCTCTGCTGTGGTAACTTGCATCCTGCTCCTGAATT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAATTCAGGAGCAGGATaGAAGTTACCACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLNSGAG*KLPQQR
Trigger: TCTCTGCTGTGGTAACTTGCATCCTGCTCCTGAATT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACATCCTCATTGTGACTaGAGTCATGATTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHPHCD*SHDFPI
Trigger: GATGGGGAAATCATGACTGCAGTCACAATGAGGATG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCATACGACATCAGCTaGAGCATTGTTCCACTTATG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLAYDIS*SIVPLM
Trigger: CATAAGTGGAACAATGCTGCAGCTGATGTCGTATGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGCATACGACATCAGCTaGAGCATTGTTCCACTTATG +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSAYDIS*SIVPLM
Trigger: CATAAGTGGAACAATGCTGCAGCTGATGTCGTATGC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACGGTTCCGGAATGTCTaGAGTCCCAAAGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLRFRNV*SPKEKI
Trigger: AATCTTTTCTTTGGGACTGCAGACATTCCGGAACCG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTCATACCAAACACATaGAAAGGCTTTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSVIPNT*KGFPHP
Trigger: GGGATGTGGAAAGCCTTTGCATGTGTTTGGTATGAC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGCTACACACCACAGCTaGAGCTTTACTGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLATHHS*SFTVPA
Trigger: GGCTGGAACAGTAAAGCTGCAGCTGTGGTGTGTAGC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACATCTTCACTGTGACTaGAGTCATTATTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHLHCD*SHYFPT
Trigger: GGTGGGGAAATAATGACTGCAGTCACAGTGAAGATG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAATGGATACAGGGAGGTaGTCCAAGAACTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLMDTGR*SKNCHL
Trigger: CAAATGACAGTTCTTGGAGCACCTCCCTGTATCCAT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATGGGTCAGATACATTTaGGAGGCATGGAAACAGTGG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGWVRYI*EAWKQW
Trigger: CCACTGTTTCCATGCCTCGCAAATGTATCTGACCCA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTATGACTCATTTCCTTTaGACCGCATGTCATCCAACC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSMTHFL*TACHPT
Trigger: GGTTGGATGACATGCGGTGCAAAGGAAATGAGTCAT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGAGGCAGCATCATTATaGGTCTATCTCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLEAASL*VYLFLS
Trigger: ACTCAGGAAGAGATAGACCCATAATGATGCTGCCTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313599.8
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGCATTGTTCCACTTATaGTGGCATACGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLALFHL*WHTVPH
Trigger: GTGGGGGACCGTATGCCACCATAAGTGGAACAATGC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCACTCCCTTCACACTaGAACTTTTCGGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSLPSH*NFSAQV
Trigger: AACTTGGGCCGAAAAGTTCCAGTGTGAAGGGAGTGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACCGGATGTTGAACAATaGGGCATAATGCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGPDVEQ*GIMQGE
Trigger: CTCACCTTGCATTATGCCCCATTGTTCAACATCCGG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAACTTGCCCGTCACACTaGGATTTGCCATTCACAAGT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGTCPSH*DLPFTS
Trigger: ACTTGTGAATGGCAAATCCCAGTGTGACGGGCAAGT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATATATTTTCCTCCTGTaGTTGAGAGAGCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLYIFLL*LREQSH
Trigger: GTGGGACTGCTCTCTCAACCACAGGAGGAAAATATA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGAGACAGTATTTCCATaGATACAGGGAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGETVFP*IQGGAP
Trigger: TGGAGCACCTCCCTGTATCCATGGAAATACTGTCTC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCTGTCCCCAGGGTTTaGCGTGACAGTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSVPRV*RDSPIE
Trigger: TTCTATGGGACTGTCACGCCAAACCCTGGGGACAGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAGGAGGCAGGAATGATGAGGAATTAATAAGCAGTAATGCGGCTCAGTGGCCTTCTAAAGTCATTTTGTaGCTTCAGAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KGGRNDEELISSNAAQWPSKVIL*LQRQEE
Trigger: TTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA...AGGCCACTGAGCCGCATTACTGCTTATTAATTCCTCATCATTCCTGCCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTACAACATCAGACCCTaGCTGCAAATGAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLYNIRP*LQMRQA
Trigger: GGCTTGCCTCATTTGCAGTCAGGGTCTGATGTTGTA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGTTCTTTCTGTGAAATaGGGCTCTCTGGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLVLSVK*GSLETL
Trigger: CAGGGTCTCCAGAGAGCCTCATTTCACAGAAAGAAC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGTAATGTTCTTTCTGTaGAATGAGGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSVMFFL*NEALWR
Trigger: TCTCCAGAGAGCCTCATTTCACAGAAAGAACATTAC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCTTCCATATTTAAATaGCACGCAGTCTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLASIFK*HAVCFH
Trigger: GTGGAAACAGACTGCGTGTCATTTAAATATGGAAGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGCTTCCATATTTAAATaGCACGCAGTCTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSASIFK*HAVCFH
Trigger: GTGGAAACAGACTGCGTGTCATTTAAATATGGAAGC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATTCTATCTTCACATGTaGTCCAGGTCTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGFYLHM*SRSLLL
Trigger: CAGCAGAAGAGACCTGGATCACATGTGAAGATAGAA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATTCTGGTTGAAACTCTaGGGGGCAGATGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLFWLKL*GADVFV
Trigger: AACAAAAACATCTGCCCCTCAGAGTTTCAACCAGAA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTTCTGGTTGAAACTCTaGGGGGCAGATGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSFWLKL*GADVFV
Trigger: AACAAAAACATCTGCCCCTCAGAGTTTCAACCAGAA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGACATCCAAGCTGTTTaGACACGACAGTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLDIQAV*TRQLRQ
Trigger: CTGCCTCAACTGTCGTGTGCAAACAGCTTGGATGTC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACGGTTCCGGAATGTCTaGAGTCCCAAAGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGRFRNV*SPKEKI
Trigger: AATCTTTTCTTTGGGACTGCAGACATTCCGGAACCG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACTTTTCCATCATATGTaGAGTCCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGLFHHM*SPRELT
Trigger: AGTCAGCTCTCTGGGACTGCACATATGATGGAAAAG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACTGTGTACACAATTATaGTTTCCCCATCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLCTQL*FPHPLC
Trigger: ACACAGTGGATGGGGAAAGCATAATTGTGTACACAG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACAGTTTAATTCTCTaGACAGCACATTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHSLIL*TAHWQH
Trigger: ATGCTGCCAATGTGCTGTGCAGAGAATTAAACTGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCAACTCCAACTTCTCTaGTGTGGATACAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSQLQLL*CGYKCL
Trigger: AAGACACTTGTATCCACAGCAGAGAAGTTGGAGTTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAATGGATACAGGGAGGTaGTCCAAGAACTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGMDTGR*SKNCHL
Trigger: CAAATGACAGTTCTTGGAGCACCTCCCTGTATCCAT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGGGTCAGGCTTCCTGTaGAGATCACAGAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLGSGFL*RSQRQY
Trigger: ATACTGTCTCTGTGATCTGCACAGGAAGCCTGACCC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAATGACTCATTTCCTTTaGACCGCATGTCATCCAACC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGMTHFL*TACHPT
Trigger: GGTTGGATGACATGCGGTGCAAAGGAAATGAGTCAT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGCCAATGATAGAAGATaGGCAGTCCAGCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLANDRR*AVQLAT
Trigger: TGTAGCCAGCTGGACTGCCCATCTTCTATCATTGGC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTACATTTGCGAGGCATaGAAACAGTGGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLYICEA*KQWLGQ
Trigger: CTGACCCAGCCACTGTTTCCATGCCTCGCAAATGTA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCTTCACAACCATGGTTaGGGGTGTCATCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLLHNHG*GCHLRF
Trigger: GAACCTCAGATGACACCCCCAACCATGGTTGTGAAG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGTGTCTTCCGGATGTTaGACAATGGGGCATAATGCA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLVSSGC*TMGHNA
Trigger: TGCATTATGCCCCATTGTTCAACATCCGGAAGACAC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCATTCCCTAAGCAATaGAACCTGTGTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSFPKQ*NLCPHT
Trigger: TGTGTGGGGACACAGGTTTCATTGCTTAGGGAATGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAACGGACATCCTAGCTaGTTACAAACCACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLNGHPS*LQTTRA
Trigger: AGCCCTTGTGGTTTGTAAGCAGCTAGGATGTCCGTT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATCCCAGTGCAAGATATaGTGTTTATCCAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSQCKI*CLSKCL
Trigger: GAGACATTTGGATAAACAGCATATCTTGCACTGGGA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGAAGCATGTTCGCTTTaGTTTTCCATCATATGTGCA +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLEACSL*FSIICA
Trigger: TGCACATATGATGGAAAAGCAAAGCGAACATGCTTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACATTCAAGTTGCCTaGAAACAACTTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHIQVA*KQLQQC
Trigger: ACATTGCTGAAGTTGTTTGCAGGCAACTTGAATGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACACAGTTTAATTCTCTaGACAGCACATTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGHSLIL*TAHWQH
Trigger: ATGCTGCCAATGTGCTGTGCAGAGAATTAAACTGTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGATTGGCTTCACCTTaGCTTCCTACTCTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGRLASP*LPTLVR
Trigger: TCTAACTAGAGTAGGAAGGCAAGGTGAAGCCAATCT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGTCCAAAACGAAACATaGCGAAAGAAAATGGACATC +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLVQNET*RKKMDI
Trigger: GATGTCCATTTTCTTTCGCCATGTTTCGTTTTGGAC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGTTCCCCACCTTTCTTaGAATTTCACCTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLVPHLS*NFTSTL
Trigger: GAGAGTGGAGGTGAAATTCCAAGAAAGGTGGGGAAC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGCCAACTCATTCCCCTaGCATAAAATGTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLANSFP*HKMSSS
Trigger: GCTGGATGACATTTTATGCCAGGGGAATGAGTTGGC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCATTCTTCCAGTTCTaGTCACATATTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSFFQF*SHIVHH
Trigger: GTGGTGGACAATATGTGACCAGAACTGGAAGAATGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCACTCCCTTCACACTaGAACTTTTCGGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSLPSH*NFSAQV
Trigger: AACTTGGGCCGAAAAGTTCCAGTGTGAAGGGAGTGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCCAACTTCTCTGCTGTaGATACAAGTGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLPTSLL*IQVSSG
Trigger: TCCGGAAGACACTTGTATCCACAGCAGAGAAGTTGG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGQVSIS*NKFSSR
Trigger: TCTCGAGGAGAATTTATTCCATGAGATGGAGACCTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CCA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCTAAAGTCATTTTGTaGCTTCAGAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSKVIL*LQRQEE
Trigger: TTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCATATGCCACGAGTTTTaGGGCAGCATCATTATGGGT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLICHEF*GSIIMG
Trigger: ACCCATAATGATGCTGCCTCAAAACTCGTGGCATAT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCACCTCTACTCTCCCTaGACAATTGTTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLHLYSP*TIVTSI
Trigger: GATGGAAGTAACAATTGTTCAGGGAGAGTAGAGGTG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAATTACTCCAGCATCTaGTCTTCGGAAGCATGTTCG +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLNYSSI*SSEACS
Trigger: CGAACATGCTTCCGAAGATCAGATGCTGGAGTAATT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACAGCCAAATAGGTCCTaGTGCTTCTTTAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGQPNRS*CFFKIG
Trigger: ACCTATTTTAAAGAAGCATCAGGACCTATTTGGCTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCATCCTCATTGTGACTaGAGTCATGATTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLHPHCD*SHDFPI
Trigger: GATGGGGAAATCATGACTGCAGTCACAATGAGGATG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCCCAGTGCAAGATATaGTGTTTATCCAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSQCKI*CLSKCL
Trigger: GAGACATTTGGATAAACAGCATATCTTGCACTGGGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCTTTTCCATCATATGTaGAGTCCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLLFHHM*SPRELT
Trigger: AGTCAGCTCTCTGGGACTGCACATATGATGGAAAAG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGAAGCATGTTCGCTTTaGTTTTCCATCATATGTGCA +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGEACSL*FSIICA
Trigger: TGCACATATGATGGAAAAGCAAAGCGAACATGCTTC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCATCTTCACTGTGACTaGAGTCATTATTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLHLHCD*SHYFPT
Trigger: GGTGGGGAAATAATGACTGCAGTCACAGTGAAGATG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACACATTCAAGTTGCCTaGAAACAACTTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGHIQVA*KQLQQC
Trigger: ACATTGCTGAAGTTGTTTGCAGGCAACTTGAATGTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGACCCACATTCAAGTTaGCTGCAAACAACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLDPHSS*LQTTSA
Trigger: TGCTGAAGTTGTTTGCAGGCAACTTGAATGTGGGTC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGTCCAAAACGAAACATaGCGAAAGAAAATGGACATC +
Preference number: 4 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGVQNET*RKKMDI
Trigger: GATGTCCATTTTCTTTCGCCATGTTTCGTTTTGGAC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACCACAGAAAGAGATATaGCATCTCCACAGTTTAATT +
Preference number: 4 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLPQKEI*HLHSLI
Trigger: AATTAAACTGTGGAGATGCCATATCTCTTTCTGTGG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR GCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCTGTGTACACAATTATaGTTTCCCCATCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLLCTQL*FPHPLC
Trigger: ACACAGTGGATGGGGAAAGCATAATTGTGTACACAG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCATTCTTCCAGTTCTaGTCACATATTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSFFQF*SHIVHH
Trigger: GTGGTGGACAATATGTGACCAGAACTGGAAGAATGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR TCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCAGCCAAATAGGTCCTaGTGCTTCTTTAAAATAGGT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLQPNRS*CFFKIG
Trigger: ACCTATTTTAAAGAAGCATCAGGACCTATTTGGCTG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTCTAAAGTCATTTTGTaGCTTCAGAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSKVIL*LQRQEE
Trigger: TTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CCA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCCACAGAAAGAGATATaGCATCTCCACAGTTTAATT +
Preference number: 4 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLPQKEI*HLHSLI
Trigger: AATTAAACTGTGGAGATGCCATATCTCTTTCTGTGG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 90 bp ACCGTCCTTGAAAGTACACCTCCAGTCTTCCCGAGCAGCGGTTGCTaGCGCCCACCAGCCTCAGGCCCCATGTTGCATCACCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TVLESTPPVFPSSGC*RPPASGPMLHHLSR
Trigger: CCTGCTCAGGTGATGCAACATGGGGCCTGAGGCTGGTGGGCGGCAGCAACCGCTGCTCGGGAAGACTGGAGGTGTACTTTCAAGGACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 90 bp CCCCACAGCCCAGCTGCCTGCACACAATGCCTGCTATGGCTGTGGTaGTGTTCCTCCTGCCGACGCTGCCCCAGGTCCCGTTATAGAAGA +
Preference number: 5 (lower is better)
Translates to: PHSPAACTQCLLWLW*CSSCRRCPRSRYRR
Trigger: TCTTCTATAACGGGACCTGGGGCAGCGTCGGCAGGAGGAACATCACCACAGCCATAGCAGGCATTGTGTGCAGGCAGCTGGGCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 90 bp ACCGTCCTTGAAAGTACACCTCCAGTCTTCCCGAGCAGCGGTTGCTaGCGCCCACCAGCCTCAGGCCCCATGTTGCATCACCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: TVLESTPPVFPSSGC*RPPASGPMLHHQNK
Trigger: TTTGTTCTGGTGATGCAACATGGGGCCTGAGGCTGGTGGGCGGCAGCAACCGCTGCTCGGGAAGACTGGAGGTGTACTTTCAAGGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545926.1
CDS GCA 90 bp GATAAAGGGGCGAGGCTGACAACTCCATTCTCCCCACAGCCCAGCTaGCTGCACACAATGCCTGCTATGGCTGTGGTGATGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: DKGARLTTPFSPQPS*LHTMPAMAVVMFLL
Trigger: CAGGAGGAACATCACCACAGCCATAGCAGGCATTGTGTGCAGGCAGCTGGGCTGTGGGGAGAATGGAGTTGTCAGCCTCGCCCCTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACTTCCCGAGCAGCGGTaGCTGCCGCCCACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLPEQR*LPPTSL
Trigger: GAGGCTGGTGGGCGGCAGCAACCGCTGCTCGGGAAG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGGGGGTGTCATCTGAGGTTCTTGTCCCATGTGGGTCCTCTCTCTTGAGGCAGTGTCATCTGAGGTTCTaGTCCCATGTGGGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LGVSSEVLVPCGSSLLRQCHLRF*SHVGPL
Trigger: GAGAGGACCCACATGGGACAAGAACCTCAGATGACA...CTGCCTCAAGAGAGAGGACCCACATGGGACAAGAACCTCAGATGACACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS CCA 90 bp ATGTTCATTCCCCAGCCATTAGCACACAGAATTCCCACGGCACCCTaGACATTCACCTCAACTTTTCCAGCACACCTGCTGCTTCCACCC +
Preference number: 5 (lower is better)
Translates to: MFIPQPLAHRIPTAP*TFTSTFPAHLLLPP
Trigger: GGGTGGAAGCAGCAGGTGTGCTGGAAAAGTTGAGGTGAATGTCCAGGGTGCCGTGGGAATTCTGTGTGCTAATGGCTGGGGAATGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 90 bp ATTACCGGAGCAGGAGACACCATCAAGCCATACAACATCAGACCCTaGCTGCAAATGAGGCAAGCCAGCGAAGTGAAGTGCGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: ITGAGDTIKPYNIRP*LQMRQASEVKCGST
Trigger: TGTGGAACCGCACTTCACTTCGCTGGCTTGCCTCATTTGCAGTCAGGGTCTGATGTTGTATGGCTTGATGGTGTCTCCTGCTCCGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 90 bp CCCAACTGCTTGCATACGACATCAGCTGCAGCATTGTTCCACTTATaGTGGCATACGGTCCCCCACCTTCCTTGGATTTTCAGCTCTACT +
Preference number: 5 (lower is better)
Translates to: PNCLHTTSAAALFHL*WHTVPHLPWIFSST
Trigger: AGTAGAGCTGAAAATCCAAGGAAGGTGGGGGACCGTATGCCACCATAAGTGGAACAATGCTGCAGCTGATGTCGTATGCAAGCAGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 90 bp CTCTGGAACTGCAGACAAATATGGGTCAGATACATTTGCGAGGCATaGAAACAGTGGCTGGGTCAGGCTTCCTGTGCAGATCACAGAGAC +
Preference number: 5 (lower is better)
Translates to: LWNCRQIWVRYICEA*KQWLGQASCADHRD
Trigger: GTCTCTGTGATCTGCACAGGAAGCCTGACCCAGCCACTGTTTCCATGCCTCGCAAATGTATCTGACCCATATTTGTCTGCAGTTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCTTCCCGAGCAGCGGTaGCTGCCGCCCACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLLPEQR*LPPTSL
Trigger: GAGGCTGGTGGGCGGCAGCAACCGCTGCTCGGGAAG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGCAGAGACCGTGGCATaGAAGGCCACTCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLAETVA*KATPQP
Trigger: GGGCTGTGGAGTGGCCTTCAATGCCACGGTCTCTGC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 90 bp GGTTTAGCACGACGACTGCCAAAGACGCTGAACGGACATCCTAGCTaGTTACAAACCACAAGGGCTTGTTCATTCTTCCAGTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GLARRLPKTLNGHPS*LQTTRACSFFQFWS
Trigger: TGACCAGAACTGGAAGAATGAACAAGCCCTTGTGGTTTGTAAGCAGCTAGGATGTCCGTTCAGCGTCTTTGGCAGTCGTCGTGCTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS CCA 90 bp AACTGCTTGCATACGACATCAGCTGCAGCATTGTTCCACTTATGGTaGCATACGGTCCCCCACCTTCCTTGGATTTTCAGCTCTACTCTC +
Preference number: 5 (lower is better)
Translates to: NCLHTTSAAALFHLW*HTVPHLPWIFSSTL
Trigger: GAGAGTAGAGCTGAAAATCCAAGGAAGGTGGGGGACCGTATGCCACCATAAGTGGAACAATGCTGCAGCTGATGTCGTATGCAAGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 90 bp ATATCCTGTAGAAGCGTTTCCCAGACCCATGCCAATGATAGAAGATaGGCAGTCCAGCTGGCTACACACCACAGCTGCAGCTTTACTGTT +
Preference number: 5 (lower is better)
Translates to: ISCRSVSQTHANDRR*AVQLATHHSCSFTV
Trigger: AACAGTAAAGCTGCAGCTGTGGTGTGTAGCCAGCTGGACTGCCCATCTTCTATCATTGGCATGGGTCTGGGAAACGCTTCTACAGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS CCA 90 bp CTTGTCCCATGTGGGTCCTCTCTCTTGAGGCAGGTCTCCATCTCATaGAATAAATTCTCCTCGAGAGAACCCCTCCTTCTGGTTGAAACT +
Preference number: 5 (lower is better)
Translates to: LVPCGSSLLRQVSIS*NKFSSREPLLLVET
Trigger: AGTTTCAACCAGAAGGAGGGGTTCTCTCGAGGAGAATTTATTCCATGAGATGGAGACCTGCCTCAAGAGAGAGGACCCACATGGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000539726.5
ENST00000543841.5
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCAGAGACCGTGGCATaGAAGGCCACTCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGAETVA*KATPQP
Trigger: GGGCTGTGGAGTGGCCTTCAATGCCACGGTCTCTGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TCAGTGGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTACCTGCAGCAGAAAAATGTCATCTGAGGTTCTaGTCCCATGTGGGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SVAYSVQRDALCLPAAEKCHLRF*SHVGPL
Trigger: GAGAGGACCCACATGGGACAAGAACCTCAGATGACA...TTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGCCTCAGGCCCCATGTaGCATCACCTGAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSASGPM*HHLSRL
Trigger: TAACCTGCTCAGGTGATGCAACATGGGGCCTGAGGC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 90 bp GGCTGCCTGTGGGCTGAGCAGATCAAACTTGCTTCCATATTTAAATaGCACGCAGTCTGTTTCCACTCCCATCGTATACAATCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GCLWAEQIKLASIFK*HAVCFHSHRIQSQR
Trigger: TCTCTGGGATTGTATACGATGGGAGTGGAAACAGACTGCGTGTCATTTAAATATGGAAGCAAGTTTGATCTGCTCAGCCCACAGGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS TCA 90 bp GGGGCAGACAGGCACTGCCATATGGAGATATGCGTTTTAGGACACTaGATGTCATCCACCCACATGAAACCAGAGCCTGTCTTAGATAAA +
Preference number: 5 (lower is better)
Translates to: GADRHCHMEICVLGH*MSSTHMKPEPVLDK
Trigger: TTTATCTAAGACAGGCTCTGGTTTCATGTGGGTGGATGACATTCAGTGTCCTAAAACGCATATCTCCATATGGCAGTGCCTGTCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACAGGGACCGTCTCCATaGACCAGCCTCAACTCCAAA +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLQGPSP*TSLNSK
Trigger: TTTGGAGTTGAGGCTGGTCAATGGAGACGGTCCCTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGCCTCAGGCCCCATGTaGCATCACCTGAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGASGPM*HHLSRL
Trigger: TAACCTGCTCAGGTGATGCAACATGGGGCCTGAGGC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATGTGCCCCACCGTCCTaGAAAGTACACCTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLCAPPS*KVHLQS
Trigger: AGACTGGAGGTGTACTTTCAAGGACGGTGGGGCACA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAGTCTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGGAGGGGCAGATGTTTTaGTTTCTGAACTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: KSKVILWLQRQEELPTAMEGQMF*FLNSAP
Trigger: TGGTGCCGAGTTCAGAAACAAAAACATCTGCCCCTC...CATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS GCA 90 bp TCCACTCCCATCGTATACAATCCCAGAGAGAGGCTTCCCCTCCAGTaGAGCCAGAATTCGACATTAAGATGTGTAATGTTCTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: STPIVYNPRERLPLQ*SQNSTLRCVMFFLN
Trigger: GTTGAGAAAGAACATTACACATCTTAATGTCGAATTCTGGCTGCACTGGAGGGGAAGCCTCTCTCTGGGATTGTATACGATGGGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544331.1
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACAGGGACCGTCTCCATaGACCAGCCTCAACTCCAAA +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGQGPSP*TSLNSK
Trigger: TTTGGAGTTGAGGCTGGTCAATGGAGACGGTCCCTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGGACATCCAAGCTGTTaGCACACGACAGTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSGHPSC*HTTVEA
Trigger: TGCCTCAACTGTCGTGTGCAAACAGCTTGGATGTCC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACTCCCTGAACAGGAGTaGTTTCCATCCACTAGCCTC +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLLPEQE*FPSTSL
Trigger: GAGGCTAGTGGATGGAAACAACTCCTGTTCAGGGAG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACCGTCACACTGGGATTaGCCATTCACAAGTCGGACA +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLPSHWD*PFTSRT
Trigger: TGTCCGACTTGTGAATGGCAAATCCCAGTGTGACGG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACGTTGATCTCCACTaGCCCGTCACACTGGGATTT +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHVDLH*PVTLGF
Trigger: AAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACGTTGATCTCCACTaGCCCGTCACACTGGGATTT +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHVDLH*PVTLGF
Trigger: AAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACAGTGTCCAAGCACGTaGATCTCCACTTGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGQCPST*ISTCPS
Trigger: TGACGGGCAAGTGGAGATCAACGTGCTTGGACACTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp GGACAAGTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGAGGGGCAGATGTTTTaGTTTCTGAACTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: GQVQRSLRNRIFHEQVSLEGQMF*FLNSAP
Trigger: TGGTGCCGAGTTCAGAAACAAAAACATCTGCCCCTC...CAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATGTCATCTGAGGTTCTaGTCCCATGTGGGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLCHLRF*SHVGPL
Trigger: GAGAGGACCCACATGGGACAAGAACCTCAGATGACA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp GTACAAAGATCCTTGCGAAACCGTATCTTCCATGAACAAGTCTCTCTGGTGGAATCTTCACAACCATGGTaGGGGGTGTCATCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: VQRSLRNRIFHEQVSLVESSQPW*GVSSEV
Trigger: AACCTCAGATGACACCCCCAACCATGGTTGTGAAGA...TTCCACCAGAGAGACTTGTTCATGGAAGATACGGTTTCGCAAGGATCTTTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CAA 90 bp TTCCTGTTAGGGATTGTGGGAAATAAAGTTCCTGGCCCCGCAAACCTAGTCATTATTTCCCTAGTTCCTTaGACCGCTGCTCTTCATGGT +
Preference number: 5 (lower is better)
Translates to: FLLGIVGNKVPGPANLVIISLVP*TAALHG
Trigger: ACCATGAAGAGCAGCGGTCAAAGGAACTAGGGAAAT...AATGACTAGGTTTGCGGGGCCAGGAACTTTATTTCCCACAATCCCTAACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS CCA 90 bp GGAAGAACTCCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAAAGAAAGGCAAAATCTGTATTATTG +
Preference number: 5 (lower is better)
Translates to: GRTPNSDVSLASSQP*LGVSSERKAKSVLL
Trigger: CAATAATACAGATTTTGCCTTTCTTTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGGAGTTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542055.5
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACTCCCTGAACAGGAGTaGTTTCCATCCACTAGCCTC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGLPEQE*FPSTSL
Trigger: GAGGCTAGTGGATGGAAACAACTCCTGTTCAGGGAG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACCACATCCCAACTGCTaGCATACGACATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGPHPNC*HTTSAA
Trigger: TGCAGCTGATGTCGTATGCAAGCAGTTGGGATGTGG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCAACAGCTGCATTCCTaGTGCTCCATCTGTCATGAC +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSQQLHS*CSICHD
Trigger: GTCATGACAGATGGAGCACAAGGAATGCAGCTGTTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTACTAGGCGGAGCCGTTaGTCCTCTAAGCAGATCAAA +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSTRRSR*SSKQIK
Trigger: TTTGATCTGCTTAGAGGACAAACGGCTCCGCCTAGT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAGAGGGGCAGATGTTTTaGTTTCTGAACTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLEGQMF*FLNSAP
Trigger: TGGTGCCGAGTTCAGAAACAAAAACATCTGCCCCTC...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATGTCATCTGAGGTTCTaGTCCCATGTGGGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGCHLRF*SHVGPL
Trigger: GAGAGGACCCACATGGGACAAGAACCTCAGATGACA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTTCTTCACAACCATGGTaGGGGGTGTCATCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSSSQPW*GVSSEV
Trigger: AACCTCAGATGACACCCCCAACCATGGTTGTGAAGA...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTATCTTCACAACCATGGTaGGGGGTGTCATCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLSSQPW*GVSSEV
Trigger: AACCTCAGATGACACCCCCAACCATGGTTGTGAAGA...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp TCAGTGGCCTATTCAGTGCAAAGGGATGCTCTCTGCTTACCTGCAGCAGAAAAACAAGTACAAAGATCCTaGCGAAACCGTATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SVAYSVQRDALCLPAAEKQVQRS*RNRIFH
Trigger: ATGGAAGATACGGTTTCGCAAGGATCTTTGTACTTG...TTTTTCTGCTGCAGGTAAGCAGAGAGCATCCCTTTGCACTGAATAGGCCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS GCA 90 bp TCACCTGAGCAGGTTACAATCACATCCTCTCTGTGTACACAATTATaGTTTCCCCATCCACTGTGTTCACAGTCCCAGATATTTGACTCA +
Preference number: 5 (lower is better)
Translates to: SPEQVTITSSLCTQL*FPHPLCSQSQIFDS
Trigger: TGAGTCAAATATCTGGGACTGTGAACACAGTGGATGGGGAAAGCATAATTGTGTACACAGAGAGGATGTGATTGTAACCTGCTCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 90 bp AAAGAGATATGGCATCTCCACAGTTTAATTCTCTGCACAGCACATTaGCAGCATGAAGAGAGAAATCAGAATCACAGACAGAGCGCCATG +
Preference number: 5 (lower is better)
Translates to: KEIWHLHSLILCTAH*QHEERNQNHRQSAM
Trigger: CATGGCGCTCTGTCTGTGATTCTGATTTCTCTCTTCATGCTGCCAATGTGCTGTGCAGAGAATTAAACTGTGGAGATGCCATATCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTATGTCTAGTCACGGCTaGTCCAAAACGAAACATGGC +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSMSSHG*SKTKHG
Trigger: GCCATGTTTCGTTTTGGACAAGCCGTGACTAGACAT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACAACAGCTGCATTCCTaGTGCTCCATCTGTCATGAC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGQQLHS*CSICHD
Trigger: GTCATGACAGATGGAGCACAAGGAATGCAGCTGTTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCTGTGCCCCACCGTCCTaGAAAGTACACCTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLCAPPS*KVHLQS
Trigger: AGACTGGAGGTGTACTTTCAAGGACGGTGGGGCACA...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTAGACCCACATTCAAGTaGCCTGCAAACAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSRPTFK*PANNFS
Trigger: GCTGAAGTTGTTTGCAGGCAACTTGAATGTGGGTCT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCAGTGTCCAAGCACGTaGATCTCCACTTGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLQCPST*ISTCPS
Trigger: TGACGGGCAAGTGGAGATCAACGTGCTTGGACACTG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGATCTTCACAACCATGGTaGGGGGTGTCATCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGSSQPW*GVSSEV
Trigger: AACCTCAGATGACACCCCCAACCATGGTTGTGAAGA...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000546182.1
CDS-3UTR CAA 90 bp AAAGGAGGCAGGAATGATGAGGAATTAATAAGCAGTAATGCGGCTCAGTGGCCTAAGTCTAAAGTCATTTaGTGGCTTCAGAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: KGGRNDEELISSNAAQWPKSKVI*WLQRQE
Trigger: TTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTT...AGGCCACTGAGCCGCATTACTGCTTATTAATTCCTCATCATTCCTGCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS-3UTR CAA 90 bp AAGTCTAAAGTCATTTTGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGAAGTCTAAAGTCATTTaGTGGCTTCAGAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: KSKVILWLQRQEELPTAMKSKVI*WLQRQE
Trigger: TTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTT...CATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546182.1
CDS CCA 90 bp TTAGACCATTCCCTTTTCCAAAGTGATCTCCCACAGAAAGAGATATaGCATCTCCACAGTTTAATTCTCTGCACAGCACATTGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LDHSLFQSDLPQKEI*HLHSLILCTAHWQH
Trigger: ATGCTGCCAATGTGCTGTGCAGAGAATTAAACTGTGGAGATGCCATATCTCTTTCTGTGGGAGATCACTTTGGAAAAGGGAATGGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTAATATGCCACGAGTTTaGAGGCAGCATCATTATGGG +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSNMPRV*RQHHYG
Trigger: CCCATAATGATGCTGCCTCAAAACTCGTGGCATATT...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAAATATGCCACGAGTTTaGAGGCAGCATCATTATGGG +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLNMPRV*RQHHYG
Trigger: CCCATAATGATGCTGCCTCAAAACTCGTGGCATATT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAACATCAGCTGCAGCATaGTTCCACTTATGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGTSAAA*FHLWWH
Trigger: ATGCCACCATAAGTGGAACAATGCTGCAGCTGATGT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTAACAAACCACAAGGGCTaGTTCATTCTTCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLTNHKG*FILPVL
Trigger: CAGAACTGGAAGAATGAACAAGCCCTTGTGGTTTGT...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTGGAAGCATGTTCGCTTaGCTTTTCCATCATATGTGC +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSGSMFA*LFHHMC
Trigger: GCACATATGATGGAAAAGCAAAGCGAACATGCTTCC...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCCCGTCACACTGGGATTaGCCATTCACAAGTCGGACA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLPSHWD*PFTSRT
Trigger: TGTCCGACTTGTGAATGGCAAATCCCAGTGTGACGG...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAATGGGTCAGATACATTaGCGAGGCATGGAAACAGTG +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGMGQIH*RGMETV
Trigger: CACTGTTTCCATGCCTCGCAAATGTATCTGACCCAT...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAGCCTCAAACCCAGATaGGCTTCACCTTGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSLKPR*ASPCLP
Trigger: AGGAAGGCAAGGTGAAGCCAATCTGGGTTTGAGGCT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416109.2
CDS TCA 90 bp AGCAGCATCTTCCAAAATCTCCAATTCACCGTTGTCATGTTGAAATaGTGGCCCAATGTTTTCAGACCTCCTCACTGGGTTATAAATTCC +
Preference number: 5 (lower is better)
Translates to: SSIFQNLQFTVVMLK*WPNVFRPPHWVINS
Trigger: GGAATTTATAACCCAGTGAGGAGGTCTGAAAACATTGGGCCATCATTTCAACATGACAACGGTGAATTGGAGATTTTGGAAGATGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543276.1
CDS GCA 90 bp TTCTCCTCGAGAGAACCCCTCCTTCTGGTTGAAACTGAGAATGGATaGTTCATGGTTAGGATTCAAATTCAAATGGCCTATCCCTTATAT +
Preference number: 5 (lower is better)
Translates to: FSSREPLLLVETENG*FMVRIQIQMAYPLY
Trigger: ATATAAGGGATAGGCCATTTGAATTTGAATCCTAACCATGAAGCATCCATTCTCAGTTTCAACCAGAAGGAGGGGTTCTCTCGAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543841.5
CDS CCA 90 bp CGAGAGAACCCCTCCTTCTGGTTGAAACTGAGAATGGATGCTTCATaGTTAGGATTCAAATTCAAATGGCCTATCCCTTATATTAGGACA +
Preference number: 5 (lower is better)
Translates to: RENPSFWLKLRMDAS*LGFKFKWPIPYIRT
Trigger: TGTCCTAATATAAGGGATAGGCCATTTGAATTTGAATCCTAACCATGAAGCATCCATTCTCAGTTTCAACCAGAAGGAGGGGTTCTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543841.5
CDS CCA 90 bp TCTCCATCTCATGGAATAAATTCTCCTCGAGAGAACCCCTCCTTCTaGTTGAAACTGAGAATGGATGCTTCATGGTTAGGATTCAAATTC +
Preference number: 5 (lower is better)
Translates to: SPSHGINSPRENPSF*LKLRMDASWLGFKF
Trigger: GAATTTGAATCCTAACCATGAAGCATCCATTCTCAGTTTCAACCAGAAGGAGGGGTTCTCTCGAGGAGAATTTATTCCATGAGATGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543841.5
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAGGAAGCATGTTCGCTTaGCTTTTCCATCATATGTGC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGGSMFA*LFHHMC
Trigger: GCACATATGATGGAAAAGCAAAGCGAACATGCTTCC...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTACACAGTCCCAGATATTaGACTCATTTCCAATGCAAG +
Preference number: 5 (lower is better)
Translates to: CCLLQRYLEVDLVSPGSLHSPRY*THFQCK
Trigger: CTTGCATTGGAAATGAGTCAAATATCTGGGACTGTG...TAGACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCACTAGGCGGAGCCGTTaGTCCTCTAAGCAGATCAAA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLTRRSR*SSKQIK
Trigger: TTTGATCTGCTTAGAGGACAAACGGCTCCGCCTAGT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCGAGGGGCAGATGTTTTaGTTTCTGAACTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLEGQMF*FLNSAP
Trigger: TGGTGCCGAGTTCAGAAACAAAAACATCTGCCCCTC...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCATGTCTAGTCACGGCTaGTCCAAAACGAAACATGGC +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLMSSHG*SKTKHG
Trigger: GCCATGTTTCGTTTTGGACAAGCCGTGACTAGACAT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCACATCAGCTGCAGCATaGTTCCACTTATGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLTSAAA*FHLWWH
Trigger: ATGCCACCATAAGTGGAACAATGCTGCAGCTGATGT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACACAGTCCCAGATATTaGACTCATTTCCAATGCAAG +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGHSPRY*THFQCK
Trigger: CTTGCATTGGAAATGAGTCAAATATCTGGGACTGTG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAGACCCACATTCAAGTaGCCTGCAAACAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLRPTFK*PANNFS
Trigger: GCTGAAGTTGTTTGCAGGCAACTTGAATGTGGGTCT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCACAGACACATCGTTTaGATGAAGACAGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSHRHIV*MKTVKI
Trigger: AATTTTGACTGTCTTCATCAAAACGATGTGTCTGTG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGAAGTCTGAGCAGATCAAACTaGCTTCCATATTTAAATGAC +
Preference number: 5 (lower is better)
Translates to: SCCLLQRYLEVDLVSPGSLSRSN*LPYLND
Trigger: GTCATTTAAATATGGAAGCAAGTTTGATCTGCTCAG...ACTTCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAGTTCTGGTCACATATaGTCCACCACTGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLSSGHI*STTVHE
Trigger: TTCATGAACAGTGGTGGACAATATGTGACCAGAACT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp AAAAGTTGTTGTCTCCTTCAAAGATATTTAGAGGTTGATCTGGTGAGCCCTGGACTGAGCAGATCAAACTaGCTTCCATATTTAAATGAC +
Preference number: 5 (lower is better)
Translates to: KSCCLLQRYLEVDLVSPGLSRSN*LPYLND
Trigger: GTCATTTAAATATGGAAGCAAGTTTGATCTGCTCAG...TCCAGGGCTCACCAGATCAACCTCTAAATATCTTTGAAGGAGACAACAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS-3UTR CAA 90 bp TTGTTCAAGAAATGTTATTTGGACAAGTTTTCCATAGGGCAACTTGACTTCCTCAAGTCTAAAGTCATTTaGTGGCTTCAGAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: LFKKCYLDKFSIGQLDFLKSKVI*WLQRQE
Trigger: TTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTT...GAGGAAGTCAAGTTGCCCTATGGAAAACTTGTCCAAATAACATTTCTTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 72 bp CCAGCTGCCTGCACACAATGCCTGCTATGGCTGTGGTaGTGTTCCTCCTGCCGACGCTGCCCCAGGTCCCGT +
Preference number: 6 (lower is better)
Translates to: PAACTQCLLWLW*CSSCRRCPRSR
Trigger: ACGGGACCTGGGGCAGCGTCGGCAGGAGGAACATCACCACAGCCATAGCAGGCATTGTGTGCAGGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 72 bp GAAAGTACACCTCCAGTCTTCCCGAGCAGCGGTTGCTaGCGCCCACCAGCCTCAGGCCCCATGTTGCATCAC +
Preference number: 6 (lower is better)
Translates to: ESTPPVFPSSGC*RPPASGPMLHH
Trigger: GTGATGCAACATGGGGCCTGAGGCTGGTGGGCGGCAGCAACCGCTGCTCGGGAAGACTGGAGGTGTACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS GCA 72 bp GCGAGGCTGACAACTCCATTCTCCCCACAGCCCAGCTaGCTGCACACAATGCCTGCTATGGCTGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: ARLTTPFSPQPS*LHTMPAMAVVM
Trigger: CATCACCACAGCCATAGCAGGCATTGTGTGCAGGCAGCTGGGCTGTGGGGAGAATGGAGTTGTCAGCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 72 bp GGGTGTCACACAGTGAGCCCCAGTGTCCAAGCACGTTaGTCTCCACTTGCCCGTCACACTGGGATTTGCCAT +
Preference number: 6 (lower is better)
Translates to: GCHTVSPSVQAR*SPLARHTGICH
Trigger: ATGGCAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTGCTTGGACACTGGGGCTCACTGTGTGACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp GGTCTCTTCTGCTGGGCTGGAGATTCTTCGCTCCCATaGGGCAGACAGGCACTGCCATATGGAGATATGCGT +
Preference number: 6 (lower is better)
Translates to: GLFCWAGDSSLP*GRQALPYGDMR
Trigger: ACGCATATCTCCATATGGCAGTGCCTGTCTGCCCCATGGGAGCGAAGAATCTCCAGCCCAGCAGAAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CAA 72 bp TGGGTGTCACACAGTGAGCCCCAGTGTCCAAGCACGTaGATCTCCACTTGCCCGTCACACTGGGATTTGCCA +
Preference number: 6 (lower is better)
Translates to: WVSHSEPQCPST*ISTCPSHWDLP
Trigger: TGGCAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTGCTTGGACACTGGGGCTCACTGTGTGACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp AGAAGCGTTTCCCAGACCCATGCCAATGATAGAAGATaGGCAGTCCAGCTGGCTACACACCACAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSVSQTHANDRR*AVQLATHHSCS
Trigger: GCTGCAGCTGTGGTGTGTAGCCAGCTGGACTGCCCATCTTCTATCATTGGCATGGGTCTGGGAAACGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS CCA 72 bp CCCCAGCCATTAGCACACAGAATTCCCACGGCACCCTaGACATTCACCTCAACTTTTCCAGCACACCTGCTG +
Preference number: 6 (lower is better)
Translates to: PQPLAHRIPTAP*TFTSTFPAHLL
Trigger: CAGCAGGTGTGCTGGAAAAGTTGAGGTGAATGTCCAGGGTGCCGTGGGAATTCTGTGTGCTAATGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 72 bp GCAGGAGACACCATCAAGCCATACAACATCAGACCCTaGCTGCAAATGAGGCAAGCCAGCGAAGTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: AGDTIKPYNIRP*LQMRQASEVKC
Trigger: GCACTTCACTTCGCTGGCTTGCCTCATTTGCAGTCAGGGTCTGATGTTGTATGGCTTGATGGTGTCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp AGACCCATGCCAATGATAGAAGATGGGCAGTCCAGCTaGCTACACACCACAGCTGCAGCTTTACTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: RPMPMIEDGQSS*LHTTAAALLFQ
Trigger: CTGGAACAGTAAAGCTGCAGCTGTGGTGTGTAGCCAGCTGGACTGCCCATCTTCTATCATTGGCATGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS CAA 72 bp CATCCCAACTGCTTGCATACGACATCAGCTGCAGCATaGTTCCACTTATGGTGGCATACGGTCCCCCACCTT +
Preference number: 6 (lower is better)
Translates to: HPNCLHTTSAAA*FHLWWHTVPHL
Trigger: AAGGTGGGGGACCGTATGCCACCATAAGTGGAACAATGCTGCAGCTGATGTCGTATGCAAGCAGTTGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 72 bp CGACGACTGCCAAAGACGCTGAACGGACATCCTAGCTaGTTACAAACCACAAGGGCTTGTTCATTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: RRLPKTLNGHPS*LQTTRACSFFQ
Trigger: CTGGAAGAATGAACAAGCCCTTGTGGTTTGTAAGCAGCTAGGATGTCCGTTCAGCGTCTTTGGCAGTCGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000545926.1
CDS GCA 72 bp CTCTGGAACTGCAGACAAATATGGGTCAGATACATTTaGGAGGCATGGAAACAGTGGCTGGGTCAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LWNCRQIWVRYI*EAWKQWLGQAS
Trigger: GGAAGCCTGACCCAGCCACTGTTTCCATGCCTCGCAAATGTATCTGACCCATATTTGTCTGCAGTTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 72 bp GGCGGAGCCGTTTGTCCTCTAAGCAGATCAAAGCACTaGCCTCTGGAACTGCAGACAAATATGGGTCAGATA +
Preference number: 6 (lower is better)
Translates to: GGAVCPLSRSKH*PLELQTNMGQI
Trigger: TATCTGACCCATATTTGTCTGCAGTTCCAGAGGGCAGTGCTTTGATCTGCTTAGAGGACAAACGGCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp CATACGACATCAGCTGCAGCATTGTTCCACTTATGGTaGCATACGGTCCCCCACCTTCCTTGGATTTTCAGC +
Preference number: 6 (lower is better)
Translates to: HTTSAAALFHLW*HTVPHLPWIFS
Trigger: GCTGAAAATCCAAGGAAGGTGGGGGACCGTATGCCACCATAAGTGGAACAATGCTGCAGCTGATGTCGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CAA 72 bp CCTCTGGAACTGCAGACAAATATGGGTCAGATACATTaGCGAGGCATGGAAACAGTGGCTGGGTCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLELQTNMGQIH*RGMETVAGSGF
Trigger: GAAGCCTGACCCAGCCACTGTTTCCATGCCTCGCAAATGTATCTGACCCATATTTGTCTGCAGTTCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CAA 90 bp CAGTGTCCAAGCACGTTGATCTCCACTTGCCCGTCACACTGGGATTaGCCATTCACAAGTCGGACATCTGTATATCGGGAACAGACAACT +
Preference number: 6 (lower is better)
Translates to: QCPSTLISTCPSHWD*PFTSRTSVYREQTT
Trigger: AGTTGTCTGTTCCCGATATACAGATGTCCGACTTGTGAATGGCAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTGCTTGGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CAA 90 bp CCCACATATCAAGATTCTGGTGAGCCCTGGAAGTCTAAAGTCATTTaGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATGTGTCGC +
Preference number: 6 (lower is better)
Translates to: PTYQDSGEPWKSKVI*WLQRQEELPTAMCR
Trigger: GCGACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTTCCAGGGCTCACCAGAATCTTGATATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS CCA 72 bp TTGCATACGACATCAGCTGCAGCATTGTTCCACTTATaGTGGCATACGGTCCCCCACCTTCCTTGGATTTTC +
Preference number: 6 (lower is better)
Translates to: LHTTSAAALFHL*WHTVPHLPWIF
Trigger: GAAAATCCAAGGAAGGTGGGGGACCGTATGCCACCATAAGTGGAACAATGCTGCAGCTGATGTCGTATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp TGCAGACAAATATGGGTCAGATACATTTGCGAGGCATaGAAACAGTGGCTGGGTCAGGCTTCCTGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: CRQIWVRYICEA*KQWLGQASCAD
Trigger: ATCTGCACAGGAAGCCTGACCCAGCCACTGTTTCCATGCCTCGCAAATGTATCTGACCCATATTTGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp GATTCTGGTGAGCCCTGGAAGTCTAAAGTCATTTTGTaGCTTCAGAGGCAGGAAGAACTCCCAACAGCGATG +
Preference number: 6 (lower is better)
Translates to: DSGEPWKSKVIL*LQRQEELPTAM
Trigger: CATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTTCCAGGGCTCACCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS CAA 72 bp AGCACGTTGATCTCCACTTGCCCGTCACACTGGGATTaGCCATTCACAAGTCGGACATCTGTATATCGGGAA +
Preference number: 6 (lower is better)
Translates to: STLISTCPSHWD*PFTSRTSVYRE
Trigger: TTCCCGATATACAGATGTCCGACTTGTGAATGGCAAATCCCAGTGTGACGGGCAAGTGGAGATCAACGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CAA 72 bp CAAGATTCTGGTGAGCCCTGGAAGTCTAAAGTCATTTaGTGGCTTCAGAGGCAGGAAGAACTCCCAACAGCG +
Preference number: 6 (lower is better)
Translates to: QDSGEPWKSKVI*WLQRQEELPTA
Trigger: CGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCACAAAATGACTTTAGACTTCCAGGGCTCACCAGAATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539726.5
CDS CAA 90 bp GAAATGAGGCTCTCTGGAGACCCTGATTGCAGACCCACATTCAAGTaGCCTGCAAACAACTTCAGCAATGTTCATTCCCCAGCCATTAGC +
Preference number: 6 (lower is better)
Translates to: EMRLSGDPDCRPTFK*PANNFSNVHSPAIS
Trigger: GCTAATGGCTGGGGAATGAACATTGCTGAAGTTGTTTGCAGGCAACTTGAATGTGGGTCTGCAATCAGGGTCTCCAGAGAGCCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 72 bp AGGCACTGCCATATGGAGATATGCGTTTTAGGACACTaGATGTCATCCACCCACATGAAACCAGAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: RHCHMEICVLGH*MSSTHMKPEPV
Trigger: GACAGGCTCTGGTTTCATGTGGGTGGATGACATTCAGTGTCCTAAAACGCATATCTCCATATGGCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp CCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATaGTTGGGGGTGTCATCTGAAAGAAAGGCAAAATCT +
Preference number: 6 (lower is better)
Translates to: PNSDVSLASSQP*LGVSSERKAKS
Trigger: AGATTTTGCCTTTCTTTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542055.5
CDS CAA 72 bp CGAAACATGGCGAAAGAAAATGGACATCCAAGCTGTTaGCACACGACAGTTGAGGCAGTAGTGTTCCACCCA +
Preference number: 6 (lower is better)
Translates to: RNMAKENGHPSC*HTTVEAVVFHP
Trigger: TGGGTGGAACACTACTGCCTCAACTGTCGTGTGCAAACAGCTTGGATGTCCATTTTCTTTCGCCATGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000543276.1
CDS GCA 72 bp CATCAGAACAGATCACTCCAACATCTTCACTGTGACTaGAGTCATTATTTCCCCACCCACTGTTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: HQNRSLQHLHCD*SHYFPTHCSCM
Trigger: CATGCAGGAACAGTGGGTGGGGAAATAATGACTGCAGTCACAGTGAAGATGTTGGAGTGATCTGTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS GCA 72 bp TCTTTCTGTGAAATGAGGCTCTCTGGAGACCCTGATTaGAGACCCACATTCAAGTTGCCTGCAAACAACTTC +
Preference number: 6 (lower is better)
Translates to: SFCEMRLSGDPD*RPTFKLPANNF
Trigger: GAAGTTGTTTGCAGGCAACTTGAATGTGGGTCTGCAATCAGGGTCTCCAGAGAGCCTCATTTCACAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp TGCTGTGGATACAAGTGTCTTCCGGATGTTGAACAATaGGGCATAATGCAAGGTGAGTTTCACTCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: CCGYKCLPDVEQ*GIMQGEFHSLH
Trigger: GTGAAGGGAGTGAAACTCACCTTGCATTATGCCCCATTGTTCAACATCCGGAAGACACTTGTATCCACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS GCA 72 bp ATCGTATACAATCCCAGAGAGAGGCTTCCCCTCCAGTaGAGCCAGAATTCGACATTAAGATGTGTAATGTTC +
Preference number: 6 (lower is better)
Translates to: IVYNPRERLPLQ*SQNSTLRCVMF
Trigger: GAACATTACACATCTTAATGTCGAATTCTGGCTGCACTGGAGGGGAAGCCTCTCTCTGGGATTGTATACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CAA 72 bp AACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTaGGGGGTGTCATCTGAAAGAAAGGCAAAATCTGTA +
Preference number: 6 (lower is better)
Translates to: NSDVSLASSQPW*GVSSERKAKSV
Trigger: TACAGATTTTGCCTTTCTTTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542055.5
CDS TCA 72 bp CCATGTTGCATCACCAGAACAAATTACTCCAGCATCTaGTCTTCGGAAGCATGTTCGCTTTGCTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: PCCITRTNYSSI*SSEACSLCFSI
Trigger: GATGGAAAAGCAAAGCGAACATGCTTCCGAAGATCAGATGCTGGAGTAATTTGTTCTGGTGATGCAACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545926.1
CDS GCA 72 bp CATCTGTATATCGGGAACAGACAACTCCAACTTCTCTaGTGTGGATACAAGTGTCTTCCGGATGTTGAACAA +
Preference number: 6 (lower is better)
Translates to: HLYIGNRQLQLL*CGYKCLPDVEQ
Trigger: TTGTTCAACATCCGGAAGACACTTGTATCCACAGCAGAGAAGTTGGAGTTGTCTGTTCCCGATATACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CAA 72 bp GTCTTCTTTGATTATCATAGCAGTTTCTGCCCTCCCTaGACCTTCCATGTAGCCTTAGGTATTTGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: VFFDYHSSFCPP*TFHVALGICVS
Trigger: GCTGACACAAATACCTAAGGCTACATGGAAGGTCAAGGGAGGGCAGAAACTGCTATGATAATCAAAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545597.1
CDS CAA 90 bp AGAACTCCCAACAGCGATGTGTCGCTAGCATCTTCACAACCATGGTaGGGGGTGTCATCTGAAAGAAAGGCAAAATCTGTATTATTGAAT +
Preference number: 6 (lower is better)
Translates to: RTPNSDVSLASSQPW*GVSSERKAKSVLLN
Trigger: ATTCAATAATACAGATTTTGCCTTTCTTTCAGATGACACCCCCAACCATGGTTGTGAAGATGCTAGCGACACATCGCTGTTGGGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542055.5
CDS TCA 72 bp CAGATCTGCCTTATCAGAACAAATTACTCCAGCATCTaGTCTTCGGAAGCATGTTCGCTTTGCTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: QICLIRTNYSSI*SSEACSLCFSI
Trigger: GATGGAAAAGCAAAGCGAACATGCTTCCGAAGATCAGATGCTGGAGTAATTTGTTCTGATAAGGCAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS TCA 72 bp TTCCAAAATCTCCAATTCACCGTTGTCATGTTGAAATaGTGGCCCAATGTTTTCAGACCTCCTCACTGGGTT +
Preference number: 6 (lower is better)
Translates to: FQNLQFTVVMLK*WPNVFRPPHWV
Trigger: AACCCAGTGAGGAGGTCTGAAAACATTGGGCCATCATTTCAACATGACAACGGTGAATTGGAGATTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543276.1
CDS TCA 72 bp GCATCTTCCAAAATCTCCAATTCACCGTTGTCATGTTaGAATGATGGCCCAATGTTTTCAGACCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: ASSKISNSPLSC*NDGPMFSDLLT
Trigger: AGTGAGGAGGTCTGAAAACATTGGGCCATCATTTCAACATGACAACGGTGAATTGGAGATTTTGGAAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543276.1
CDS GCA 72 bp CAGAAAGAGATATGGCATCTCCACAGTTTAATTCTCTaGACAGCACATTGGCAGCATGAAGAGAGAAATCAG +
Preference number: 6 (lower is better)
Translates to: QKEIWHLHSLIL*TAHWQHEERNQ
Trigger: CTGATTTCTCTCTTCATGCTGCCAATGTGCTGTGCAGAGAATTAAACTGTGGAGATGCCATATCTCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CCA 72 bp TCCCTTTTCCAAAGTGATCTCCCACAGAAAGAGATATaGCATCTCCACAGTTTAATTCTCTGCACAGCACAT +
Preference number: 6 (lower is better)
Translates to: SLFQSDLPQKEI*HLHSLILCTAH
Trigger: ATGTGCTGTGCAGAGAATTAAACTGTGGAGATGCCATATCTCTTTCTGTGGGAGATCACTTTGGAAAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313599.8
ENST00000416109.2
ENST00000544331.1
CDS CAA 72 bp CATACCAAACACATGCAAAGGCTTTCCACATCCCAATaGTTTACAAACAACAGCTGCATTCCTTGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: HTKHMQRLSTSQ*FTNNSCIPCAP
Trigger: TGGAGCACAAGGAATGCAGCTGTTGTTTGTAAACAATTGGGATGTGGAAAGCCTTTGCATGTGTTTGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2
CDS CCA 72 bp CCCTCCTTCTGGTTGAAACTGAGAATGGATGCTTCATaGTTAGGATTCAAATTCAAATGGCCTATCCCTTAT +
Preference number: 6 (lower is better)
Translates to: PSFWLKLRMDAS*LGFKFKWPIPY
Trigger: ATAAGGGATAGGCCATTTGAATTTGAATCCTAACCATGAAGCATCCATTCTCAGTTTCAACCAGAAGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543841.5
CDS CAA 90 bp AAAATAGGTCATACCAAACACATGCAAAGGCTTTCCACATCCCAATaGTTTACAAACAACAGCTGCATTCCTTGTGCTCCATCTGTCATG +
Preference number: 6 (lower is better)
Translates to: KIGHTKHMQRLSTSQ*FTNNSCIPCAPSVM
Trigger: CATGACAGATGGAGCACAAGGAATGCAGCTGTTGTTTGTAAACAATTGGGATGTGGAAAGCCTTTGCATGTGTTTGGTATGACCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313599.8
ENST00000416109.2