RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD163 (Homo sapiens)

Ensembl gene IDs: ENSG00000177575

Ensembl transcript IDs: ENST00000359156.8, ENST00000396620.7, ENST00000432237.3, ENST00000534848.1, ENST00000537044.1, ENST00000537626.5, ENST00000538840.1, ENST00000539632.1, ENST00000541972.5, ENST00000542280.5

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCTGCCCCCAGCCGTGTaGATGGCACTGCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSLPPAV*MALPNA
Trigger: CGCATTTGGCAGTGCCATTCACACGGCTGGGGGCAG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCTGCCCCCAGCCGTGTaGATGGCACTGCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVLPPAV*MALPNA
Trigger: CGCATTTGGCAGTGCCATTCACACGGCTGGGGGCAG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCACAGCCCAGCTGCCTaGACACCACACCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVHSPAA*TPHPQW
Trigger: CCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACACAGCCCAGCTGCCTaGACACCACACCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITHSPAA*TPHPQW
Trigger: CCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCACAGCCCAGCTGCCTaGACACCACACCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFHSPAA*TPHPQW
Trigger: CCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCCTCCAACCAGTCTaGGTTCCCTGTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPLQPV*VPCGLS
Trigger: GCTCAGCCCACAGGGAACCCAGACTGGTTGGAGGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCCTCCAACCAGTCTaGGTTCCCTGTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPLQPV*VPCGLS
Trigger: GCTCAGCCCACAGGGAACCCAGACTGGTTGGAGGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCTGCACAGGCCTCTCTaGTGGCTTCACTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKLHRPL*WLHWSV
Trigger: GACTGACCAGTGAAGCCAGCAGAGAGGCCTGTGCAG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCTGCACAGGCCTCTCTaGTGGCTTCACTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSLHRPL*WLHWSV
Trigger: GACTGACCAGTGAAGCCAGCAGAGAGGCCTGTGCAG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTAACTTCCAGACGCCCTaGACAGGCCTCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTNFQTP*TGLSAG
Trigger: GCCAGCAGAGAGGCCTGTGCAGGGCGTCTGGAAGTT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGGAGATGATGGGCACTaGCACAGCGTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKGDDGH*HSVSGP
Trigger: AGGACCTGACACGCTGTGGCAGTGCCCATCATCTCC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCCCAGGAACCTCCATaGCAGATCTCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPQEPP*QISTRP
Trigger: TGGACGTGTGGAGATCTGGCATGGAGGTTCCTGGGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKAASSL*PHSLWP
Trigger: GGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGCTACAAGTTCCTTCTaGGCGGGGTGCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKATSSF*AGCYWA
Trigger: TGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCTCGACCAATGGCTGTaGCGGCAGTTGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTLDQWL*RQLDIP
Trigger: TGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCTCGACCAATGGCTGTaGCGGCAGTTGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVLDQWL*RQLDIP
Trigger: TGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTAGGCACCAAGCGTTTTaGGCTCCACTCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSRHQAF*APLCPH
Trigger: GTGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCTGCCCCCAGCCGTGTaGATGGCACTGCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLPPAV*MALPNA
Trigger: CGCATTTGGCAGTGCCATTCACACGGCTGGGGGCAG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTGCCTGCAATTTTGCTaGCCCCAGCCGTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKCLQFC*PQPCEW
Trigger: CCATTCACACGGCTGGGGGCAGCAAAATTGCAGGCA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCCGCATCCTCCTTGTaGCTGCAATTTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPASSL*LQFCCP
Trigger: GGGGCAGCAAAATTGCAGGCACAAGGAGGATGCGGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCGCATCCTCCTTGTaGCTGCAATTTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPASSL*LQFCCP
Trigger: GGGGCAGCAAAATTGCAGGCACAAGGAGGATGCGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCTGCACAGGCCTCTCTaGTGGCTTCACTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFLHRPL*WLHWSV
Trigger: GACTGACCAGTGAAGCCAGCAGAGAGGCCTGTGCAG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCACAGCCCAGCTGCCTaGACACCACACCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHHSPAA*TPHPQW
Trigger: CCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGAGATGATGGGCACTaGCACAGCGTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGDDGH*HSVSGP
Trigger: AGGACCTGACACGCTGTGGCAGTGCCCATCATCTCC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCCAGGAACCTCCATaGCAGATCTCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPQEPP*QISTRP
Trigger: TGGACGTGTGGAGATCTGGCATGGAGGTTCCTGGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFAASSL*PHSLWP
Trigger: GGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSAASSL*PHSLWP
Trigger: GGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTAASSL*PHSLWP
Trigger: GGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKGCDGS*TSQLLA
Trigger: TGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCTACAAGTTCCTTCTaGGCGGGGTGCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSATSSF*AGCYWA
Trigger: TGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCCAGCCGTGTGAATaGCACTGCCAAATGCGGGAT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPQPCE*HCQMRD
Trigger: ATCCCGCATTTGGCAGTGCCATTCACACGGCTGGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCCCAGCCGTGTGAATaGCACTGCCAAATGCGGGAT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPQPCE*HCQMRD
Trigger: ATCCCGCATTTGGCAGTGCCATTCACACGGCTGGGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCCAGCCGTGTGAATaGCACTGCCAAATGCGGGAT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPQPCE*HCQMRD
Trigger: ATCCCGCATTTGGCAGTGCCATTCACACGGCTGGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCACAGGCCTCTCTGCTaGCTTCACTGGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKHRPLC*LHWSVS
Trigger: TGAGACTGACCAGTGAAGCCAGCAGAGAGGCCTGTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTATGGCCCCAGCGTCTaGCAGGACAATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFYGPSV*QDNPTR
Trigger: CCTTGTGGGATTGTCCTGCCAGACGCTGGGGCCATA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTATGGCCCCAGCGTCTaGCAGGACAATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSYGPSV*QDNPTR
Trigger: CCTTGTGGGATTGTCCTGCCAGACGCTGGGGCCATA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTTGGACATCCCAGTTaGTTGCATGCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVGHPS*LHATAA
Trigger: TGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGGACAATCTCCCATGTaGTGCTCAGTCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVGQSPM*CSVPVQ
Trigger: CTGCACTGGGACTGAGCAGCACATGGGAGATTGTCC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGACAATCTCCCATGTaGTGCTCAGTCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGQSPM*CSVPVQ
Trigger: CTGCACTGGGACTGAGCAGCACATGGGAGATTGTCC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGACAATCTCCCATGTaGTGCTCAGTCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGQSPM*CSVPVQ
Trigger: CTGCACTGGGACTGAGCAGCACATGGGAGATTGTCC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTGCCTGCAATTTTGCTaGCCCCAGCCGTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVCLQFC*PQPCEW
Trigger: CCATTCACACGGCTGGGGGCAGCAAAATTGCAGGCA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAACTTCCAGACGCCCTaGACAGGCCTCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHNFQTP*TGLSAG
Trigger: GCCAGCAGAGAGGCCTGTGCAGGGCGTCTGGAAGTT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTTCCCCACTCCTCCTaGACTTTCACTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVPHSS*TFTSTL
Trigger: GAGAGTGGAAGTGAAAGTCCAGGAGGAGTGGGGAAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTGCDGS*TSQLLA
Trigger: TGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGCDGS*TSQLLA
Trigger: TGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTGCAGGTTCATGTCCCTaGCAAGAAACGCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSAGSCP*QETLSS
Trigger: GCTTGACAGCGTTTCTTGCCAGGGACATGAACCTGC...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCCCTCCAACCAGTCTaGGTTCCCTGTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPLQPV*VPCGLS
Trigger: GCTCAGCCCACAGGGAACCCAGACTGGTTGGAGGGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCACGAGGACAGTGTTTaGGACTGGTTTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKHEDSV*DWFPEQ
Trigger: CTGCTCAGGAAACCAGTCCCAAACACTGTCCTCGTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCACAGGCCTCTCTGCTaGCTTCACTGGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSHRPLC*LHWSVS
Trigger: TGAGACTGACCAGTGAAGCCAGCAGAGAGGCCTGTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCAGCATCCTCAGCATaGTCACAGTTATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPASSA*SQLCFP
Trigger: GGGAAAGCATAACTGTGATCATGCTGAGGATGCTGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCAGATCTGCTCCCTTTaGGCAAATCACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKQICSL*ANHSSI
Trigger: GATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCTCGACCAATGGCTGTaGCGGCAGTTGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLDQWL*RQLDIP
Trigger: TGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCTCGACCAATGGCTGTaGCGGCAGTTGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHLDQWL*RQLDIP
Trigger: TGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTGCTACTGGGCAGAGTaGAAGATGGGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSCYWAE*KMGLMS
Trigger: GGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTGCTACTGGGCAGAGTaGAAGATGGGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFCYWAE*KMGLMS
Trigger: GGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAGGCACCAAGCGTTTTaGGCTCCACTCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHRHQAF*APLCPH
Trigger: GTGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTTCAGTCCCAGTGCAGTaGAACATATGCCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSSVPVQ*NICLQI
Trigger: GATCTGGAGGCATATGTTTCACTGCACTGGGACTGA...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTTGGGACTGGTTTCCTaGGCAGATTACAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTLGLVS*ADYRGH
Trigger: GTGGCCTCTGTAATCTGCTCAGGAAACCAGTCCCAA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTTGGGACTGGTTTCCTaGGCAGATTACAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFLGLVS*ADYRGH
Trigger: GTGGCCTCTGTAATCTGCTCAGGAAACCAGTCCCAA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTTTACCAGGCGAAGTTaGCCACTCTCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSFTRRS*PLSMQA
Trigger: GGCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTTACCAGGCGAAGTTaGCCACTCTCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVFTRRS*PLSMQA
Trigger: GGCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTCTTGTTGTCACATGTaGTCCAGGTCTCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTSCCHM*SRSPPR
Trigger: CCTCGGAGGAGACCTGGATCACATGTGACAACAAGA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTCTTGTTGTCACATGTaGTCCAGGTCTCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSSCCHM*SRSPPR
Trigger: CCTCGGAGGAGACCTGGATCACATGTGACAACAAGA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTCTTGTTGTCACATGTaGTCCAGGTCTCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSCCHM*SRSPPR
Trigger: CCTCGGAGGAGACCTGGATCACATGTGACAACAAGA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTTGCACTTCACTTCATTaGGCCATATCGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSCTSLH*AISVQS
Trigger: GGACTGGACCGATATGGCTCAATGAAGTGAAGTGCA...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTGCACTTCACTTCATTaGGCCATATCGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKCTSLH*AISVQS
Trigger: GGACTGGACCGATATGGCTCAATGAAGTGAAGTGCA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCATGATCCATCCAAATaGGTCCAGAACCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKHDPSK*VQNLHW
Trigger: CCAGTGCAGGTTCTGGACGCATTTGGATGGATCATG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGACATCCCAGTTGCTTaGATGCCACAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVDIPVA*MPQQHR
Trigger: ACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGACATCCCAGTTGCTTaGATGCCACAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSDIPVA*MPQQHR
Trigger: ACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGTTGGACATCCCAGTTaGTTGCATGCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFVGHPS*LHATAA
Trigger: TGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAAC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGTTGGACATCCCAGTTaGTTGCATGCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTVGHPS*LHATAA
Trigger: TGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAAC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTAAGTCCACCCCATTaGCAGTTCTTGCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVSPPH*QFLQSQ
Trigger: TTGGGACTGCAAGAACTGGCAATGGGGTGGACTTAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCCTCACACGGGGTCTTaGCATTCACCAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSPHTGS*HSPSEF
Trigger: AAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCTCACACGGGGTCTTaGCATTCACCAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPHTGS*HSPSEF
Trigger: AAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVAAQSQ*SETYAS
Trigger: GGAGGCATATGTTTCACTGCACTGGGACTGAGCAGC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFAAQSQ*SETYAS
Trigger: GGAGGCATATGTTTCACTGCACTGGGACTGAGCAGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSAAQSQ*SETYAS
Trigger: GGAGGCATATGTTTCACTGCACTGGGACTGAGCAGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTTGTGCCTGCAATTTTaGTGCCCCCAGCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSLCLQF*CPQPCE
Trigger: TTCACACGGCTGGGGGCAGCAAAATTGCAGGCACAA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTGTGCCTGCAATTTTaGTGCCCCCAGCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVLCLQF*CPQPCE
Trigger: TTCACACGGCTGGGGGCAGCAAAATTGCAGGCACAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCCGCATCCTCCTTGTaGCTGCAATTTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPASSL*LQFCCP
Trigger: GGGGCAGCAAAATTGCAGGCACAAGGAGGATGCGGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCTGCACAGGCCTCTCTaGTGGCTTCACTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLHRPL*WLHWSV
Trigger: GACTGACCAGTGAAGCCAGCAGAGAGGCCTGTGCAG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAAACTTCCAGACGCCCTaGACAGGCCTCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSNFQTP*TGLSAG
Trigger: GCCAGCAGAGAGGCCTGTGCAGGGCGTCTGGAAGTT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCAGACATGCTACTCTTaGCAACAGTGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFQTCYS*QQCPKL
Trigger: GAGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCAGACATGCTACTCTTaGCAACAGTGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSQTCYS*QQCPKL
Trigger: GAGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCCCAGGAACCTCCATaGCAGATCTCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPQEPP*QISTRP
Trigger: TGGACGTGTGGAGATCTGGCATGGAGGTTCCTGGGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGATCTGTGCAATTCACTaGAGCGTCTTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKICAIH*SVFLVP
Trigger: GGGCACAAGGAAGACGCTGCAGTGAATTGCACAGAT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGTTCCCCACTCCTCCTaGACTTTCACTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFVPHSS*TFTSTL
Trigger: GAGAGTGGAAGTGAAAGTCCAGGAGGAGTGGGGAAC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGTTCCCCACTCCTCCTaGACTTTCACTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSVPHSS*TFTSTL
Trigger: GAGAGTGGAAGTGAAAGTCCAGGAGGAGTGGGGAAC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGCAGGTTCATGTCCCTaGCAAGAAACGCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVAGSCP*QETLSS
Trigger: GCTTGACAGCGTTTCTTGCCAGGGACATGAACCTGC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTAGTCCGAATCACAGATaGAGCCCCACGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTSPNHR*SPTCHH
Trigger: ATGGTGACACGTGGGGCTCCATCTGTGATTCGGACT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCTGCATAGAACGCTaGCAGCTTCCAGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPCIER*QLPERS
Trigger: ACTTCTCTCTGGAAGCTGCCAGCGTTCTATGCAGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCCTGCATAGAACGCTaGCAGCTTCCAGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPCIER*QLPERS
Trigger: ACTTCTCTCTGGAAGCTGCCAGCGTTCTATGCAGGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGQSER*DSCPSH
Trigger: GTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGCTACAAGTTCCTTCTaGGCGGGGTGCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHATSSF*AGCYWA
Trigger: TGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCAACATCCCTGCTGTaGCTACAAGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPTSLL*LQVPSG
Trigger: CCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCAACATCCCTGCTGTaGCTACAAGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPTSLL*LQVPSG
Trigger: CCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCAACATCCCTGCTGTaGCTACAAGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPTSLL*LQVPSG
Trigger: CCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVKTCSS*GRKGNS
Trigger: GGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCC +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITKTCSS*GRKGNS
Trigger: GGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTT...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTKTCSS*GRKGNS
Trigger: GGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCCCAGCCGTGTGAATaGCACTGCCAAATGCGGGAT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPQPCE*HCQMRD
Trigger: ATCCCGCATTTGGCAGTGCCATTCACACGGCTGGGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCACCCACATGGGAATaGACATGGCCTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPPTWE*TWPCLK
Trigger: CTTTAGACAAGGCCATGTCCATTCCCATGTGGGTGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCATTGTCCACCCACATaGGAATGGACATGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKHCPPT*EWTWPC
Trigger: ACAAGGCCATGTCCATTCCCATGTGGGTGGACAATG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTATGGCCCCAGCGTCTaGCAGGACAATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVYGPSV*QDNPTR
Trigger: CCTTGTGGGATTGTCCTGCCAGACGCTGGGGCCATA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCAATCCCAAAGAGCTaGCTCATTCCCACGACAAGA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFAIPKS*LIPTTR
Trigger: TCTTGTCGTGGGAATGAGTCAGCTCTTTGGGATTGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCAATCCCAAAGAGCTaGCTCATTCCCACGACAAGA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSAIPKS*LIPTTR
Trigger: TCTTGTCGTGGGAATGAGTCAGCTCTTTGGGATTGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCAGCATCCTCAGCATaGTCACAGTTATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPASSA*SQLCFP
Trigger: GGGAAAGCATAACTGTGATCATGCTGAGGATGCTGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCAGATCTGCTCCCTTTaGGCAAATCACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVQICSL*ANHSSI
Trigger: GATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCAGATCTGCTCCCTTTaGGCAAATCACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTQICSL*ANHSSI
Trigger: GATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTTTCCCTAACAGTCTCTaGATCTCCACCTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSFPNSL*ISTSTV
Trigger: GACAGTTGAGGTGGAGATTCAGAGACTGTTAGGGAA...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTCTTCTATGTCCCAGTaGGAGTTACAGAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSSSMSQ*ELQRDP
Trigger: GGGATCCCTCTGTAACTCTCACTGGGACATAGAAGA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTCTTCTATGTCCCAGTaGGAGTTACAGAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTSSMSQ*ELQRDP
Trigger: GGGATCCCTCTGTAACTCTCACTGGGACATAGAAGA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTCAGTCCCAGTGCAGTaGAACATATGCCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSVPVQ*NICLQI
Trigger: GATCTGGAGGCATATGTTTCACTGCACTGGGACTGA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTTCCTTCCCCAAAATaGGCAGAACCAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVPSPK*AEPVAL
Trigger: TAATGCCACTGGTTCTGCTCATTTTGGGGAAGGAAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCAGAGACATGAATTCTaGGCAGATAACTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSQRHEF*ADNSRI
Trigger: GATGCGGGAGTTATCTGCTCAGAATTCATGTCTCTG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCAGAGACATGAATTCTaGGCAGATAACTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKQRHEF*ADNSRI
Trigger: GATGCGGGAGTTATCTGCTCAGAATTCATGTCTCTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGTCCTTTTGGACACTaGACATTGTCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGPFGH*TLSTHM
Trigger: CATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGTCCTTTTGGACACTaGACATTGTCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGPFGH*TLSTHM
Trigger: CATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGGTCCTTTTGGACACTaGACATTGTCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITGPFGH*TLSTHM
Trigger: CATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACC...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGGTCCTTTTGGACACTaGACATTGTCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVGPFGH*TLSTHM
Trigger: CATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTGCACTTCACTTCATTaGGCCATATCGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTCTSLH*AISVQS
Trigger: GGACTGGACCGATATGGCTCAATGAAGTGAAGTGCA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACATGCACTTCACTTCATTaGGCCATATCGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITCTSLH*AISVQS
Trigger: GGACTGGACCGATATGGCTCAATGAAGTGAAGTGCA...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGCAATAAAGGATGACTaGCGGGATGAGCGACCTGTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVAIKDD*RDERPV
Trigger: AACAGGTCGCTCATCCCGTCAGTCATCCTTTATTGC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCAATAAAGGATGACTaGCGGGATGAGCGACCTGTT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSAIKDD*RDERPV
Trigger: AACAGGTCGCTCATCCCGTCAGTCATCCTTTATTGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGAGAAAAAGACAGCTATaGCTCCCTAACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKRKRQL*LPNPVP
Trigger: AGGGACAGGGTTAGGGAGTCATAGCTGTCTTTTTCT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCAGAGACCGCTTCCATaGTCCAGCCATTATTACACA +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSQRPLP*SSHYYT
Trigger: TGTGTAATAATGGCTGGAGCATGGAAGCGGTCTCTG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCAGAGACCGCTTCCATaGTCCAGCCATTATTACACA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKQRPLP*SSHYYT
Trigger: TGTGTAATAATGGCTGGAGCATGGAAGCGGTCTCTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCATGATCCATCCAAATaGGTCCAGAACCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFHDPSK*VQNLHW
Trigger: CCAGTGCAGGTTCTGGACGCATTTGGATGGATCATG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCATGATCCATCCAAATaGGTCCAGAACCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVHDPSK*VQNLHW
Trigger: CCAGTGCAGGTTCTGGACGCATTTGGATGGATCATG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCCATCCTTGATGTTTaGAGTTCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPILDV*SSRELT
Trigger: AGTCAGCTCTCTGGAACTGCAAACATCAAGGATGGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTCCCAGTTGCTTGCATaGCACAGCAGCATCGTAACT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSSQLLA*HSSIVT
Trigger: AGTTACGATGCTGCTGTGGCATGCAAGCAACTGGGA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTAAGTCCACCCCATTaGCAGTTCTTGCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITVSPPH*QFLQSQ
Trigger: TTGGGACTGCAAGAACTGGCAATGGGGTGGACTTAC...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGTAAGTCCACCCCATTaGCAGTTCTTGCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVVSPPH*QFLQSQ
Trigger: TTGGGACTGCAAGAACTGGCAATGGGGTGGACTTAC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSLLQHP*CGYKFL
Trigger: AAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCTCACACGGGGTCTTaGCATTCACCAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPHTGS*HSPSEF
Trigger: AAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTTGACCACTCTCTATaGAGGCCACAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVDHSL*RPQHFL
Trigger: AAGAAAGTGCTGTGGCCTGCATAGAGAGTGGTCAAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCGTGTGAATGGCACTaGCAAATGCGGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPCEWH*QMRDSF
Trigger: AAAAGAATCCCGCATTTGGCAGTGCCATTCACACGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTGCCTGCAATTTTGCTaGCCCCAGCCGTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHCLQFC*PQPCEW
Trigger: CCATTCACACGGCTGGGGGCAGCAAAATTGCAGGCA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGAGATGATGGGCACTaGCACAGCGTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGDDGH*HSVSGP
Trigger: AGGACCTGACACGCTGTGGCAGTGCCCATCATCTCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCCCAGGAACCTCCATaGCAGATCTCCACACGTCCA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPQEPP*QISTRP
Trigger: TGGACGTGTGGAGATCTGGCATGGAGGTTCCTGGGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSAASSL*PHSLWP
Trigger: GGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCATCTGTGCAATTCACTaGAGCGTCTTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVICAIH*SVFLVP
Trigger: GGGCACAAGGAAGACGCTGCAGTGAATTGCACAGAT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTATCTGTGCAATTCACTaGAGCGTCTTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTICAIH*SVFLVP
Trigger: GGGCACAAGGAAGACGCTGCAGTGAATTGCACAGAT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVGCDGS*TSQLLA
Trigger: TGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCAGTCTGGGTTCCCTGTaGGCTGAGCAGGTAATTTTG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSLGSL*AEQVIL
Trigger: CAAAATTACCTGCTCAGCCCACAGGGAACCCAGACT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCTACAAGTTCCTTCTaGGCGGGGTGCTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSATSSF*AGCYWA
Trigger: TGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTGCTGGCAAAGAACATaGGCATCTTCTATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKCWQRT*ASSMSQ
Trigger: CTGGGACATAGAAGATGCCCATGTTCTTTGCCAGCA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCACAGGCCTCTCTGCTaGCTTCACTGGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVHRPLC*LHWSVS
Trigger: TGAGACTGACCAGTGAAGCCAGCAGAGAGGCCTGTG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTACACCACACCCACAGTaGTTTCAGACATGCTACTCT +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSTPHPQ*FQTCYS
Trigger: AGAGTAGCATGTCTGAAACCACTGTGGGTGTGGTGT...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCACCCACATGGGAATaGACATGGCCTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPPTWE*TWPCLK
Trigger: CTTTAGACAAGGCCATGTCCATTCCCATGTGGGTGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCATTGTCCACCCACATaGGAATGGACATGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTHCPPT*EWTWPC
Trigger: ACAAGGCCATGTCCATTCCCATGTGGGTGGACAATG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCGTGTCAGGTCCTTTTaGACACTGAACATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSRVRSF*TLNIVH
Trigger: GTGGACAATGTTCAGTGTCCAAAAGGACCTGACACG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVQNRK*VLPEVL
Trigger: TAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATATGGCCCCAGCGTCTaGCAGGACAATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSYGPSV*QDNPTR
Trigger: CCTTGTGGGATTGTCCTGCCAGACGCTGGGGCCATA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGCAGTTCCAGAGAGCTaGCTCATTTCCGTTGCATAT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITAVPES*LISVAY
Trigger: ATATGCAACGGAAATGAGTCAGCTCTCTGGAACTGC...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGCAGTTCCAGAGAGCTaGCTCATTTCCGTTGCATAT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTAVPES*LISVAY
Trigger: ATATGCAACGGAAATGAGTCAGCTCTCTGGAACTGC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTTCCTGAACATTCAGTaGCTCCATCTACCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKFLNIQ*LHLPVS
Trigger: TGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCCTAACAGTCTCTaGATCTCCACCTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVFPNSL*ISTSTV
Trigger: GACAGTTGAGGTGGAGATTCAGAGACTGTTAGGGAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACATTCCCTAACAGTCTCTaGATCTCCACCTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITFPNSL*ISTSTV
Trigger: GACAGTTGAGGTGGAGATTCAGAGACTGTTAGGGAA...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTGCTACTGGGCAGAGTaGAAGATGGGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHCYWAE*KMGLMS
Trigger: GGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTTGGGACTGGTTTCCTaGGCAGATTACAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLGLVS*ADYRGH
Trigger: GTGGCCTCTGTAATCTGCTCAGGAAACCAGTCCCAA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTGGGCCCAAAGACGATaGATTGCACGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHWAQRR*IARGQC
Trigger: ACACTGTCCTCGTGCAATTCATCGTCTTTGGGCCCA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTGGGCCCAAAGACGATaGATTGCACGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVWAQRR*IARGQC
Trigger: ACACTGTCCTCGTGCAATTCATCGTCTTTGGGCCCA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTTTACCAGGCGAAGTTaGCCACTCTCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHFTRRS*PLSMQA
Trigger: GGCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGTTCCTTCCCCAAAATaGGCAGAACCAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSVPSPK*AEPVAL
Trigger: TAATGCCACTGGTTCTGCTCATTTTGGGGAAGGAAC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGTTCCTTCCCCAAAATaGGCAGAACCAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVVPSPK*AEPVAL
Trigger: TAATGCCACTGGTTCTGCTCATTTTGGGGAAGGAAC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCAGAGACATGAATTCTaGGCAGATAACTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFQRHEF*ADNSRI
Trigger: GATGCGGGAGTTATCTGCTCAGAATTCATGTCTCTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCTTGTTGTCACATGTaGTCCAGGTCTCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSCCHM*SRSPPR
Trigger: CCTCGGAGGAGACCTGGATCACATGTGACAACAAGA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTTTCTGGGTCTTACTTaGGCAGACTACTCCAACATC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKFLGLT*ADYSNI
Trigger: GATGTTGGAGTAGTCTGCTCAAGTAAGACCCAGAAA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCCATCCATCATGTTTaGAATCCCAAAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPIHHV*NPKELT
Trigger: AGTCAGCTCTTTGGGATTGCAAACATGATGGATGGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCATCCTTGATGTTTaGAGTTCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPILDV*SSRELT
Trigger: AGTCAGCTCTCTGGAACTGCAAACATCAAGGATGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCCATCCTTGATGTTTaGAGTTCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPILDV*SSRELT
Trigger: AGTCAGCTCTCTGGAACTGCAAACATCAAGGATGGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCCATCCTTGATGTTTaGAGTTCCAGAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPILDV*SSRELT
Trigger: AGTCAGCTCTCTGGAACTGCAAACATCAAGGATGGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGACATCCCAGTTGCTTaGATGCCACAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVDIPVA*MPQQHR
Trigger: ACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGTTGGACATCCCAGTTaGTTGCATGCCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHVGHPS*LHATAA
Trigger: TGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAAC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCACACTGTAATTCCCTaGATAGAACGCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFHTVIP*IERWQL
Trigger: AAGCTGCCAGCGTTCTATGCAGGGAATTACAGTGTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCACACTGTAATTCCCTaGATAGAACGCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVHTVIP*IERWQL
Trigger: AAGCTGCCAGCGTTCTATGCAGGGAATTACAGTGTG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGACTCCACATTTAAGCTaGTGGCAAAGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKTPHLS*WQRTWA
Trigger: TGCCCATGTTCTTTGCCAGCAGCTTAAATGTGGAGT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGACAATCTCCCATGTaGTGCTCAGTCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGQSPM*CSVPVQ
Trigger: CTGCACTGGGACTGAGCAGCACATGGGAGATTGTCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGTTGACCACTCTCTATaGAGGCCACAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVVDHSL*RPQHFL
Trigger: AAGAAAGTGCTGTGGCCTGCATAGAGAGTGGTCAAC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCGTGTGAATGGCACTaGCAAATGCGGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPCEWH*QMRDSF
Trigger: AAAAGAATCCCGCATTTGGCAGTGCCATTCACACGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCCGTGTGAATGGCACTaGCAAATGCGGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFPCEWH*QMRDSF
Trigger: AAAAGAATCCCGCATTTGGCAGTGCCATTCACACGG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCGTGTGAATGGCACTaGCAAATGCGGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPCEWH*QMRDSF
Trigger: AAAAGAATCCCGCATTTGGCAGTGCCATTCACACGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTTGTGCCTGCAATTTTaGTGCCCCCAGCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLCLQF*CPQPCE
Trigger: TTCACACGGCTGGGGGCAGCAAAATTGCAGGCACAA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCAGACATGCTACTCTTaGCAACAGTGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHQTCYS*QQCPKL
Trigger: GAGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCAGTGGTTTCAGACATaGTACTCTTGCCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSQWFQT*YSCQQC
Trigger: GCACTGTTGGCAAGAGTAGCATGTCTGAAACCACTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCAGTGGTTTCAGACATaGTACTCTTGCCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVQWFQT*YSCQQC
Trigger: GCACTGTTGGCAAGAGTAGCATGTCTGAAACCACTG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCTCATGGGAATTTTCTaGAAGCCGCTGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTLMGIF*KPLSLS
Trigger: AGACAGAGACAGCGGCTTGCAGAAAATTCCCATGAG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537626.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGTTCCCCACTCCTCCTaGACTTTCACTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHVPHSS*TFTSTL
Trigger: GAGAGTGGAAGTGAAAGTCCAGGAGGAGTGGGGAAC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGCAGGTTCATGTCCCTaGCAAGAAACGCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVAGSCP*QETLSS
Trigger: GCTTGACAGCGTTTCTTGCCAGGGACATGAACCTGC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCAGTCCGAATCACAGATaGAGCCCCACGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVSPNHR*SPTCHH
Trigger: ATGGTGACACGTGGGGCTCCATCTGTGATTCGGACT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVGQSER*DSCPSH
Trigger: GTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHGQSER*DSCPSH
Trigger: GTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTGCTGGCAAAGAACATaGGCATCTTCTATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFCWQRT*ASSMSQ
Trigger: CTGGGACATAGAAGATGCCCATGTTCTTTGCCAGCA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTGCTGGCAAAGAACATaGGCATCTTCTATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVCWQRT*ASSMSQ
Trigger: CTGGGACATAGAAGATGCCCATGTTCTTTGCCAGCA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCACGAGGACAGTGTTTaGGACTGGTTTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHHEDSV*DWFPEQ
Trigger: CTGCTCAGGAAACCAGTCCCAAACACTGTCCTCGTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCACGAGGACAGTGTTTaGGACTGGTTTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVHEDSV*DWFPEQ
Trigger: CTGCTCAGGAAACCAGTCCCAAACACTGTCCTCGTG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCACAGCACTTTCTTCTaGAATGGTAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVHSTFF*NGRPCW
Trigger: CCAACAAGGCCTACCATTCCAGAAGAAAGTGCTGTG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACACAGCACTTTCTTCTaGAATGGTAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITHSTFF*NGRPCW
Trigger: CCAACAAGGCCTACCATTCCAGAAGAAAGTGCTGTG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACACAGGCCTCTCTGCTaGCTTCACTGGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSHRPLC*LHWSVS
Trigger: TGAGACTGACCAGTGAAGCCAGCAGAGAGGCCTGTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACACCACACCCACAGTaGTTTCAGACATGCTACTCT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTPHPQ*FQTCYS
Trigger: AGAGTAGCATGTCTGAAACCACTGTGGGTGTGGTGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTACACCACACCCACAGTaGTTTCAGACATGCTACTCT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTTPHPQ*FQTCYS
Trigger: AGAGTAGCATGTCTGAAACCACTGTGGGTGTGGTGT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCGTGTCAGGTCCTTTTaGACACTGAACATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVRVRSF*TLNIVH
Trigger: GTGGACAATGTTCAGTGTCCAAAAGGACCTGACACG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSVQNRK*VLPEVL
Trigger: TAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGAC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCAGTGTGGCTCAGAATaGCCTCCTGAGGAATTCATT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFQCGSE*PPEEFI
Trigger: AATGAATTCCTCAGGAGGCCATTCTGAGCCACACTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCAGTGTGGCTCAGAATaGCCTCCTGAGGAATTCATT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSQCGSE*PPEEFI
Trigger: AATGAATTCCTCAGGAGGCCATTCTGAGCCACACTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGCAATCCCAAAGAGCTaGCTCATTCCCACGACAAGA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVAIPKS*LIPTTR
Trigger: TCTTGTCGTGGGAATGAGTCAGCTCTTTGGGATTGC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCAGCATCTTGTTGGTaGGTACAGTTACTATGCTTT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPASCW*VQLLCF
Trigger: AAAGCATAGTAACTGTACTCACCAACAAGATGCTGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCAGCATCCTCAGCATaGTCACAGTTATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPASSA*SQLCFP
Trigger: GGGAAAGCATAACTGTGATCATGCTGAGGATGCTGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTTCCTGAACATTCAGTaGCTCCATCTACCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFFLNIQ*LHLPVS
Trigger: TGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCTGAACATTCAGTaGCTCCATCTACCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVFLNIQ*LHLPVS
Trigger: TGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACATTCCTGAACATTCAGTaGCTCCATCTACCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITFLNIQ*LHLPVS
Trigger: TGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAA...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCTTGATAAGATGTTTTaGGTGCAGATCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKLDKMF*VQIHIP
Trigger: TGGGATGTGGATCTGCACTCAAAACATCTTATCAAG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTCTTCTATGTCCCAGTaGGAGTTACAGAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVSSMSQ*ELQRDP
Trigger: GGGATCCCTCTGTAACTCTCACTGGGACATAGAAGA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGTCCCAGTGCAGTaGAACATATGCCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSVPVQ*NICLQI
Trigger: GATCTGGAGGCATATGTTTCACTGCACTGGGACTGA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTCAGTCCCAGTGCAGTaGAACATATGCCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVSVPVQ*NICLQI
Trigger: GATCTGGAGGCATATGTTTCACTGCACTGGGACTGA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATGGGCCCAAAGACGATaGATTGCACGAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSWAQRR*IARGQC
Trigger: ACACTGTCCTCGTGCAATTCATCGTCTTTGGGCCCA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCTAAAGATGCAGGGTTaGTTTTCCCTTTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTLKMQG*FSLCLH
Trigger: GTGCAGACAAAGGGAAAATCAACCCTGCATCTTTAG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGAAGTGGGTCCTTCCTaGAGTCTTATCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVEVGPS*SLILLS
Trigger: TGACAACAAGATAAGACTTCAGGAAGGACCCACTTC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGAAGTGGGTCCTTCCTaGAGTCTTATCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFEVGPS*SLILLS
Trigger: TGACAACAAGATAAGACTTCAGGAAGGACCCACTTC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTGCACTTCACTTCATTaGGCCATATCGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVCTSLH*AISVQS
Trigger: GGACTGGACCGATATGGCTCAATGAAGTGAAGTGCA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGCAATAAAGGATGACTaGCGGGATGAGCGACCTGTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHAIKDD*RDERPV
Trigger: AACAGGTCGCTCATCCCGTCAGTCATCCTTTATTGC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAATGCGTCCAGAACCTaGACTGGAATTAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHNASRT*TGISPS
Trigger: GGATGGGCTAATTCCAGTGCAGGTTCTGGACGCATT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCATGATCCATCCAAATaGGTCCAGAACCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHHDPSK*VQNLHW
Trigger: CCAGTGCAGGTTCTGGACGCATTTGGATGGATCATG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCCATCCATCATGTTTaGAATCCCAAAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPIHHV*NPKELT
Trigger: AGTCAGCTCTTTGGGATTGCAAACATGATGGATGGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCATCCATCATGTTTaGAATCCCAAAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTPIHHV*NPKELT
Trigger: AGTCAGCTCTTTGGGATTGCAAACATGATGGATGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCCATCCATCATGTTTaGAATCCCAAAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPIHHV*NPKELT
Trigger: AGTCAGCTCTTTGGGATTGCAAACATGATGGATGGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCCCAGTTGCTTGCATaGCACAGCAGCATCGTAACT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSQLLA*HSSIVT
Trigger: AGTTACGATGCTGCTGTGGCATGCAAGCAACTGGGA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGACATCCCAGTTGCTTaGATGCCACAGCAGCATCGT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSDIPVA*MPQQHR
Trigger: ACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCAGCCATGTGTTTGTTaGCTGGATTTTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSQPCVC*LDFGVH
Trigger: GTGTACTCCAAAATCCAGGCAACAAACACATGGCTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCCATTGCCAGTTCTTaGAGTCCCAAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPIASS*SPKEKF
Trigger: AAACTTCTCTTTGGGACTGCAAGAACTGGCAATGGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCATTGCCAGTTCTTaGAGTCCCAAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPIASS*SPKEKF
Trigger: AAACTTCTCTTTGGGACTGCAAGAACTGGCAATGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGTAAGTCCACCCCATTaGCAGTTCTTGCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVVSPPH*QFLQSQ
Trigger: TTGGGACTGCAAGAACTGGCAATGGGGTGGACTTAC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCTCACACGGGGTCTTaGCATTCACCAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPHTGS*HSPSEF
Trigger: AAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACTCCACATTTAAGCTaGTGGCAAAGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTPHLS*WQRTWA
Trigger: TGCCCATGTTCTTTGCCAGCAGCTTAAATGTGGAGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTACTCCACATTTAAGCTaGTGGCAAAGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTTPHLS*WQRTWA
Trigger: TGCCCATGTTCTTTGCCAGCAGCTTAAATGTGGAGT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACTCCACATTTAAGCTaGTGGCAAAGAACATGGGCA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTPHLS*WQRTWA
Trigger: TGCCCATGTTCTTTGCCAGCAGCTTAAATGTGGAGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSAAQSQ*SETYAS
Trigger: GGAGGCATATGTTTCACTGCACTGGGACTGAGCAGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTACTCTTGCCAACAGTaGCCCAAGCTCCATTGTAAA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSYSCQQ*PKLHCK
Trigger: TTTACAATGGAGCTTGGGGCACTGTTGGCAAGAGTA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACAGACATGCTACTCTTaGCAACAGTGCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSQTCYS*QQCPKL
Trigger: GAGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTGCACTGAAATATCTGTaGAATTCACTGCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSALKYL*NSLQRL
Trigger: AAGACGCTGCAGTGAATTGCACAGATATTTCAGTGC...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCCTCATTTCCAAATTaGATCCATCTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFASFPN*IHLSRS
Trigger: TGACCTGCTCAGATGGATCCAATTTGGAAATGAGGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTATCATCAAACCAGATTaGTCCAGAGCCTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSIIKPD*SRAFSK
Trigger: TTTGGAGAAGGCTCTGGACCAATCTGGTTTGATGAT...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTCCCCCATTCTCCTTaGAATCTCACTTCTAATCTT +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKVPHSP*NLTSNL
Trigger: AAGATTAGAAGTGAGATTCCAAGGAGAATGGGGGAC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCAGGTTCATGTCCCTaGCAAGAAACGCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSAGSCP*QETLSS
Trigger: GCTTGACAGCGTTTCTTGCCAGGGACATGAACCTGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAGTCTGGGTTCCCTGTaGGCTGAGCAGGTAATTTTG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSLGSL*AEQVIL
Trigger: CAAAATTACCTGCTCAGCCCACAGGGAACCCAGACT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCCTGCATAGAACGCTaGCAGCTTCCAGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPCIER*QLPERS
Trigger: ACTTCTCTCTGGAAGCTGCCAGCGTTCTATGCAGGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGQSER*DSCPSH
Trigger: GTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACCACATTTAAGCTGCTaGCAAAGAACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITPHLSC*QRTWAS
Trigger: AGATGCCCATGTTCTTTGCCAGCAGCTTAAATGTGG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCACATTTAAGCTGCTaGCAAAGAACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPHLSC*QRTWAS
Trigger: AGATGCCCATGTTCTTTGCCAGCAGCTTAAATGTGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCACATTTAAGCTGCTaGCAAAGAACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPHLSC*QRTWAS
Trigger: AGATGCCCATGTTCTTTGCCAGCAGCTTAAATGTGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSKTCSS*GRKGNS
Trigger: GGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGACAGTGTTTGGGACTaGTTTCCTGAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTDSVWD*FPEQIT
Trigger: TGTAATCTGCTCAGGAAACCAGTCCCAAACACTGTC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACACGAGGACAGTGTTTaGGACTGGTTTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSHEDSV*DWFPEQ
Trigger: CTGCTCAGGAAACCAGTCCCAAACACTGTCCTCGTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCACCCACATGGGAATaGACATGGCCTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPPTWE*TWPCLK
Trigger: CTTTAGACAAGGCCATGTCCATTCCCATGTGGGTGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCATTGTCCACCCACATaGGAATGGACATGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHHCPPT*EWTWPC
Trigger: ACAAGGCCATGTCCATTCCCATGTGGGTGGACAATG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGAATGCTTTCAAAGCTaGACCACAGCCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVECFQS*TTAKLL
Trigger: CAACAACTTGGCTGTGGTCCAGCTTTGAAAGCATTC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGATAATGCGACGAAAATaGCCAACAGAACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKIMRRK*PTEQPQ
Trigger: TTGGGGTTGTTCTGTTGGCCATTTTCGTCGCATTAT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTAAATCAGCTGACTCATaGGAATTTTCTGCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSKSADS*EFSASR
Trigger: GCGGCTTGCAGAAAATTCCCATGAGTCAGCTGATTT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537626.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCAAGTAGCACCATTCTaGGTTTGCTCATTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSQVAPF*VCSFQR
Trigger: TCTTTGGAATGAGCAAACTCAGAATGGTGCTACTTG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCCACGACAAGAAACATaGTCCATCCAAATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVPRQET*SIQMRP
Trigger: TGGACGCATTTGGATGGATCATGTTTCTTGTCGTGG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCCACGACAAGAAACATaGTCCATCCAAATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHPRQET*SIQMRP
Trigger: TGGACGCATTTGGATGGATCATGTTTCTTGTCGTGG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCAGCATCTTGTTGGTaGGTACAGTTACTATGCTTT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPASCW*VQLLCF
Trigger: AAAGCATAGTAACTGTACTCACCAACAAGATGCTGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTATGAACCAGAGAAACTaGCAGCACTTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTMNQRN*QHFHIQ
Trigger: TTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCAT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTATGAACCAGAGAAACTaGCAGCACTTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSMNQRN*QHFHIQ
Trigger: TTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCAT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATGAACCAGAGAAACTaGCAGCACTTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFMNQRN*QHFHIQ
Trigger: TTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCAT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTTCTCCAAAATTAGATaGACCAGAGAAACTGACAGC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKFSKIR*TRETDS
Trigger: GCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCTTGATAAGATGTTTTaGGTGCAGATCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFLDKMF*VQIHIP
Trigger: TGGGATGTGGATCTGCACTCAAAACATCTTATCAAG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGAATTTCTGTGTATCTTaGGCAGACTACTCCAACATC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKNFCVS*ADYSNI
Trigger: GATGTTGGAGTAGTCTGCTCAAGATACACAGAAATT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGTTCCTTCCCCAAAATaGGCAGAACCAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHVPSPK*AEPVAL
Trigger: TAATGCCACTGGTTCTGCTCATTTTGGGGAAGGAAC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTGGGGTTTTCTGCACTaGAATATCTGTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVWGFLH*NICAIH
Trigger: GTGAATTGCACAGATATTTCAGTGCAGAAAACCCCA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTGGGGTTTTCTGCACTaGAATATCTGTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSWGFLH*NICAIH
Trigger: GTGAATTGCACAGATATTTCAGTGCAGAAAACCCCA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTGGGGTTTTCTGCACTaGAATATCTGTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTWGFLH*NICAIH
Trigger: GTGAATTGCACAGATATTTCAGTGCAGAAAACCCCA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTC +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTFISRY*IWWTKF
Trigger: GAACTTAGTCCACCAAATTCAATACCGGGAGATGAA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACATTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTC +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITFISRY*IWWTKF
Trigger: GAACTTAGTCCACCAAATTCAATACCGGGAGATGAA...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCAGCACTGAAATCAGCTaGCTCATGGGAATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSTEIS*LMGIFC
Trigger: ACAGAAAATTCCCATGAGTCAGCTGATTTCAGTGCT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542280.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCAGAGACCGCTTCCATaGTCCAGCCATTATTACACA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHQRPLP*SSHYYT
Trigger: TGTGTAATAATGGCTGGAGCATGGAAGCGGTCTCTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAAATGCGTCCAGAACCTaGACTGGAATTAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSNASRT*TGISPS
Trigger: GGATGGGCTAATTCCAGTGCAGGTTCTGGACGCATT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATCCCAGTTGCTTGCATaGCACAGCAGCATCGTAACT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSSQLLA*HSSIVT
Trigger: AGTTACGATGCTGCTGTGGCATGCAAGCAACTGGGA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLLQHP*CGYKFL
Trigger: AAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHLLQHP*CGYKFL
Trigger: AAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTATTACAGAGGCCACTTaGTCTGAAGGACATAATGAA +
Preference number: 4 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSITEAT*SEGHNE
Trigger: TTCATTATGTCCTTCAGAGCAAGTGGCCTCTGTAAT...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGTTGACCACTCTCTATaGAGGCCACAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVVDHSL*RPQHFL
Trigger: AAGAAAGTGCTGTGGCCTGCATAGAGAGTGGTCAAC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGTTGACCACTCTCTATaGAGGCCACAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHVDHSL*RPQHFL
Trigger: AAGAAAGTGCTGTGGCCTGCATAGAGAGTGGTCAAC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATCTGTGCAATTCACTaGAGCGTCTTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSICAIH*SVFLVP
Trigger: GGGCACAAGGAAGACGCTGCAGTGAATTGCACAGAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCACTGAAATATCTGTaGAATTCACTGCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFALKYL*NSLQRL
Trigger: AAGACGCTGCAGTGAATTGCACAGATATTTCAGTGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGCACTGAAATATCTGTaGAATTCACTGCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSALKYL*NSLQRL
Trigger: AAGACGCTGCAGTGAATTGCACAGATATTTCAGTGC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTTCCCCACCGTCCTTaGAATTTGATCTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITVPHRP*NLISIL
Trigger: AAGAATAGAGATCAAATTCCAAGGACGGTGGGGAAC...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGTTCCCCACCGTCCTTaGAATTTGATCTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSVPHRP*NLISIL
Trigger: AAGAATAGAGATCAAATTCCAAGGACGGTGGGGAAC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGTTCCCCACCGTCCTTaGAATTTGATCTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTVPHRP*NLISIL
Trigger: AAGAATAGAGATCAAATTCCAAGGACGGTGGGGAAC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGTCCCCCATTCTCCTTaGAATCTCACTTCTAATCTT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTVPHSP*NLTSNL
Trigger: AAGATTAGAAGTGAGATTCCAAGGAGAATGGGGGAC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGTCCCCCATTCTCCTTaGAATCTCACTTCTAATCTT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFVPHSP*NLTSNL
Trigger: AAGATTAGAAGTGAGATTCCAAGGAGAATGGGGGAC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTGCTGGCAAAGAACATaGGCATCTTCTATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHCWQRT*ASSMSQ
Trigger: CTGGGACATAGAAGATGCCCATGTTCTTTGCCAGCA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCACAGCACTTTCTTCTaGAATGGTAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVHSTFF*NGRPCW
Trigger: CCAACAAGGCCTACCATTCCAGAAGAAAGTGCTGTG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCACAGCACTTTCTTCTaGAATGGTAGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHHSTFF*NGRPCW
Trigger: CCAACAAGGCCTACCATTCCAGAAGAAAGTGCTGTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCACACCACACCCACAGTaGTTTCAGACATGCTACTCT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVTPHPQ*FQTCYS
Trigger: AGAGTAGCATGTCTGAAACCACTGTGGGTGTGGTGT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCACCCACATGGGAATaGACATGGCCTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPPTWE*TWPCLK
Trigger: CTTTAGACAAGGCCATGTCCATTCCCATGTGGGTGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCGTGTCAGGTCCTTTTaGACACTGAACATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHRVRSF*TLNIVH
Trigger: GTGGACAATGTTCAGTGTCCAAAAGGACCTGACACG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHVQNRK*VLPEVL
Trigger: TAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGAC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVVQNRK*VLPEVL
Trigger: TAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGAC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCATAATGCGACGAAAATaGCCAACAGAACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVIMRRK*PTEQPQ
Trigger: TTGGGGTTGTTCTGTTGGCCATTTTCGTCGCATTAT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTATAATGCGACGAAAATaGCCAACAGAACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSIMRRK*PTEQPQ
Trigger: TTGGGGTTGTTCTGTTGGCCATTTTCGTCGCATTAT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTTTTCCTTTTCAGTGTaGCTCAGAATGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTFSFSV*LRMASF
Trigger: AAAGGAGGCCATTCTGAGCCACACTGAAAAGGAAAA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000537626.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTTTTCCTTTTCAGTGTaGCTCAGAATGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFFSFSV*LRMASF
Trigger: AAAGGAGGCCATTCTGAGCCACACTGAAAAGGAAAA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000537626.5
ENST00000542280.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCACGACAAGAAACATaGTCCATCCAAATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPRQET*SIQMRP
Trigger: TGGACGCATTTGGATGGATCATGTTTCTTGTCGTGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTTCTCCAAAATTAGATaGACCAGAGAAACTGACAGC +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFFSKIR*TRETDS
Trigger: GCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTTCTCCAAAATTAGATaGACCAGAGAAACTGACAGC +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSFSKIR*TRETDS
Trigger: GCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCAGTTCCAGAGAGCTaGCTCATTTCCGTTGCATAT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSAVPES*LISVAY
Trigger: ATATGCAACGGAAATGAGTCAGCTCTCTGGAACTGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAAATTTCTGTGTATCTTaGGCAGACTACTCCAACATC +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITNFCVS*ADYSNI
Trigger: GATGTTGGAGTAGTCTGCTCAAGATACACAGAAATT...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAATATGCCTCCAGATCTaGCCATTTCCTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITICLQI*PFPFPK
Trigger: TTTTGGAAAAGGAAATGGTCAGATCTGGAGGCATAT...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCATATGCCTCCAGATCTaGCCATTTCCTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVICLQI*PFPFPK
Trigger: TTTTGGAAAAGGAAATGGTCAGATCTGGAGGCATAT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTATATGCCTCCAGATCTaGCCATTTCCTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSICLQI*PFPFPK
Trigger: TTTTGGAAAAGGAAATGGTCAGATCTGGAGGCATAT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCTAAAGATGCAGGGTTaGTTTTCCCTTTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLKMQG*FSLCLH
Trigger: GTGCAGACAAAGGGAAAATCAACCCTGCATCTTTAG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGAAGTGGGTCCTTCCTaGAGTCTTATCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVEVGPS*SLILLS
Trigger: TGACAACAAGATAAGACTTCAGGAAGGACCCACTTC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGAAGTGGGTCCTTCCTaGAGTCTTATCTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHEVGPS*SLILLS
Trigger: TGACAACAAGATAAGACTTCAGGAAGGACCCACTTC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTCATGGTGTTTACATTaGCAGATAGCAGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVSWCLH*QIAGSC
Trigger: ACATGAACCTGCTATCTGGCAATGTAAACACCATGA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCAGCCATGTGTTTGTTaGCTGGATTTTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHQPCVC*LDFGVH
Trigger: GTGTACTCCAAAATCCAGGCAACAAACACATGGCTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACACACTGTAATTCCCTaGATAGAACGCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSHTVIP*IERWQL
Trigger: AAGCTGCCAGCGTTCTATGCAGGGAATTACAGTGTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSLLQHP*CGYKFL
Trigger: AAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAATTACAGAGGCCACTTaGTCTGAAGGACATAATGAA +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITITEAT*SEGHNE
Trigger: TTCATTATGTCCTTCAGAGCAAGTGGCCTCTGTAAT...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTATTACAGAGGCCACTTaGTCTGAAGGACATAATGAA +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTITEAT*SEGHNE
Trigger: TTCATTATGTCCTTCAGAGCAAGTGGCCTCTGTAAT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGCTTTGATAGCAGTTaGACATCCCAGCTGGTTACA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGFDSS*TSQLVT
Trigger: TGTAACCAGCTGGGATGTCCAACTGCTATCAAAGCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGCCTCATTTCCAAATTaGATCCATCTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHASFPN*IHLSRS
Trigger: TGACCTGCTCAGATGGATCCAATTTGGAAATGAGGC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGACAGTGTTTGGGACTaGTTTCCTGAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVDSVWD*FPEQIT
Trigger: TGTAATCTGCTCAGGAAACCAGTCCCAAACACTGTC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGAATGCTTTCAAAGCTaGACCACAGCCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHECFQS*TTAKLL
Trigger: CAACAACTTGGCTGTGGTCCAGCTTTGAAAGCATTC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGAAATCAGCTGACTCATaGGAATTTTCTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKKSADS*EFSEEF
Trigger: GAATTCCTCAGAAAATTCCCATGAGTCAGCTGATTT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359156.8
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCAAATCAGCTGACTCATaGGAATTTTCTGTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFKSADS*EFSVVA
Trigger: AGCCACAACAGAAAATTCCCATGAGTCAGCTGATTT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542280.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCAAGTAGCACCATTCTaGGTTTGCTCATTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHQVAPF*VCSFQR
Trigger: TCTTTGGAATGAGCAAACTCAGAATGGTGCTACTTG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
CDS-3UTR TCA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTATGCATGATCTATGTTaGAGTTATCATCACACACTG +
Preference number: 4 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSMHDLC*SYHHTL
Trigger: CAGTGTGTGATGATAACTTCAACATAGATCATGCAT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCATGCATGATCTATGTTaGAGTTATCATCACACACTG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVMHDLC*SYHHTL
Trigger: CAGTGTGTGATGATAACTTCAACATAGATCATGCAT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACAAGTTGTCTACAAATaGCAGATGCATGATCTATGT +
Preference number: 4 (lower is better)
Translates to: FVPSPGVALHFILVNRITQVVYK*QMHDLC
Trigger: ACATAGATCATGCATCTGTCATTTGTAGACAACTTG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR TCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCAAGTTGTCTACAAATaGCAGATGCATGATCTATGT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTQVVYK*QMHDLC
Trigger: ACATAGATCATGCATCTGTCATTTGTAGACAACTTG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATCTTGATAAGATGTTTTaGGTGCAGATCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHLDKMF*VQIHIP
Trigger: TGGGATGTGGATCTGCACTCAAAACATCTTATCAAG...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACTAAAGATGCAGGGTTaGTTTTCCCTTTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSLKMQG*FSLCLH
Trigger: GTGCAGACAAAGGGAAAATCAACCCTGCATCTTTAG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTGGGGTTTTCTGCACTaGAATATCTGTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVWGFLH*NICAIH
Trigger: GTGAATTGCACAGATATTTCAGTGCAGAAAACCCCA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTC +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVFISRY*IWWTKF
Trigger: GAACTTAGTCCACCAAATTCAATACCGGGAGATGAA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCATAAGATGTTTTGAGTaGAGATCCACATCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVIRCFE*RSTSQL
Trigger: CAGCTGGGATGTGGATCTGCACTCAAAACATCTTAT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATATAAGATGTTTTGAGTaGAGATCCACATCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHIRCFE*RSTSQL
Trigger: CAGCTGGGATGTGGATCTGCACTCAAAACATCTTAT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACAGCCATGTGTTTGTTaGCTGGATTTTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSQPCVC*LDFGVH
Trigger: GTGTACTCCAAAATCCAGGCAACAAACACATGGCTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATACTCTTGCCAACAGTaGCCCAAGCTCCATTGTAAA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSYSCQQ*PKLHCK
Trigger: TTTACAATGGAGCTTGGGGCACTGTTGGCAAGAGTA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGCACTGAAATATCTGTaGAATTCACTGCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHALKYL*NSLQRL
Trigger: AAGACGCTGCAGTGAATTGCACAGATATTTCAGTGC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGCACTGAAATATCTGTaGAATTCACTGCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVALKYL*NSLQRL
Trigger: AAGACGCTGCAGTGAATTGCACAGATATTTCAGTGC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCCTCATTTCCAAATTaGATCCATCTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSASFPN*IHLSRS
Trigger: TGACCTGCTCAGATGGATCCAATTTGGAAATGAGGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCATCATCAAACCAGATTaGTCCAGAGCCTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVIIKPD*SRAFSK
Trigger: TTTGGAGAAGGCTCTGGACCAATCTGGTTTGATGAT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATATCATCAAACCAGATTaGTCCAGAGCCTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHIIKPD*SRAFSK
Trigger: TTTGGAGAAGGCTCTGGACCAATCTGGTTTGATGAT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTGTTGCCTGGATTTTaGAGTACACTTGATAAGATG +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVLLPGF*STLDKM
Trigger: CATCTTATCAAGTGTACTCCAAAATCCAGGCAACAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTTGTTGCCTGGATTTTaGAGTACACTTGATAAGATG +
Preference number: 4 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFLLPGF*STLDKM
Trigger: CATCTTATCAAGTGTACTCCAAAATCCAGGCAACAA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCACATTTAAGCTGCTaGCAAAGAACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPHLSC*QRTWAS
Trigger: AGATGCCCATGTTCTTTGCCAGCAGCTTAAATGTGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGAATGCTTTCAAAGCTaGACCACAGCCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSECFQS*TTAKLL
Trigger: CAACAACTTGGCTGTGGTCCAGCTTTGAAAGCATTC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCATAATGCGACGAAAATaGCCAACAGAACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVIMRRK*PTEQPQ
Trigger: TTGGGGTTGTTCTGTTGGCCATTTTCGTCGCATTAT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATATAATGCGACGAAAATaGCCAACAGAACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHIMRRK*PTEQPQ
Trigger: TTGGGGTTGTTCTGTTGGCCATTTTCGTCGCATTAT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTTTTCCTTTTCAGTGTaGCTCAGAATGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHFSFSV*LRMASF
Trigger: AAAGGAGGCCATTCTGAGCCACACTGAAAAGGAAAA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000537626.5
ENST00000542280.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATGAACCAGAGAAACTaGCAGCACTTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSMNQRN*QHFHIQ
Trigger: TTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATGGGGTTTTCTGCACTaGAATATCTGTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSWGFLH*NICAIH
Trigger: GTGAATTGCACAGATATTTCAGTGCAGAAAACCCCA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSFISRY*IWWTKF
Trigger: GAACTTAGTCCACCAAATTCAATACCGGGAGATGAA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATGGTGTTTACATTaGCAGATAGCAGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSWCLH*QIAGSC
Trigger: ACATGAACCTGCTATCTGGCAATGTAAACACCATGA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCATCTTCATTGTGATTaGAATAATGCTTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTHLHCD*NNAFPI
Trigger: AATGGGGAAAGCATTATTGCAATCACAATGAAGATG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCATCTTCATTGTGATTaGAATAATGCTTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVHLHCD*NNAFPI
Trigger: AATGGGGAAAGCATTATTGCAATCACAATGAAGATG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAAGATGTTTTGAGTaGAGATCCACATCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSIRCFE*RSTSQL
Trigger: CAGCTGGGATGTGGATCTGCACTCAAAACATCTTAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATATTACAGAGGCCACTTaGTCTGAAGGACATAATGAA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHITEAT*SEGHNE
Trigger: TTCATTATGTCCTTCAGAGCAAGTGGCCTCTGTAAT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGTTCCCCACCGTCCTTaGAATTTGATCTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSVPHRP*NLISIL
Trigger: AAGAATAGAGATCAAATTCCAAGGACGGTGGGGAAC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATCATCAAACCAGATTaGTCCAGAGCCTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSIIKPD*SRAFSK
Trigger: TTTGGAGAAGGCTCTGGACCAATCTGGTTTGATGAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTATTAAAGATGTTTTCTaGGTCTTACTTGAGCAGACT +
Preference number: 4 (lower is better)
Translates to: APFNSPGLHQGILKAELTIKDVF*VLLEQT
Trigger: AGTCTGCTCAAGTAAGACCCAGAAAACATCTTTAAT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS-3UTR TCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCATGCATGATCTATGTTaGAGTTATCATCACACACTG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVMHDLC*SYHHTL
Trigger: CAGTGTGTGATGATAACTTCAACATAGATCATGCAT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATTCTCCAAAATTAGATaGACCAGAGAAACTGACAGC +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSFSKIR*TRETDS
Trigger: GCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATCATGGTGTTTACATTaGCAGATAGCAGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSSWCLH*QIAGSC
Trigger: ACATGAACCTGCTATCTGGCAATGTAAACACCATGA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTTGTTGCCTGGATTTTaGAGTACACTTGATAAGATG +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLLPGF*STLDKM
Trigger: CATCTTATCAAGTGTACTCCAAAATCCAGGCAACAA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATGCATGATCTATGTTaGAGTTATCATCACACACTG +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSMHDLC*SYHHTL
Trigger: CAGTGTGTGATGATAACTTCAACATAGATCATGCAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACAAGTTGTCTACAAATaGCAGATGCATGATCTATGT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSQVVYK*QMHDLC
Trigger: ACATAGATCATGCATCTGTCATTTGTAGACAACTTG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR TCA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGTCCCTTTCACAGTATaGGAACCAATTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: HKNATVIVSERGEFLLHSVPFTV*EPIKDV
Trigger: AACATCTTTAATTGGTTCTCATACTGTGAAAGGGAC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCATCTTCATTGTGATTaGAATAATGCTTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVHLHCD*NNAFPI
Trigger: AATGGGGAAAGCATTATTGCAATCACAATGAAGATG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR GCA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCAATCGTTGTGAGTCATaGCTTATAAAGTTAGCCATA +
Preference number: 4 (lower is better)
Translates to: NATVIVSERGEFLLHSIVNRCES*LIKLAI
Trigger: TATGGCTAACTTTATAAGGCATGACTCACAACGATT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR GCA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAATCGTTGTGAGTCATaGCTTATAAAGTTAGCCATA +
Preference number: 4 (lower is better)
Translates to: LHKNATVIVSERGEFLLHNRCES*LIKLAI
Trigger: TATGGCTAACTTTATAAGGCATGACTCACAACGATT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS TCA 90 bp CCAGGTCTCCTCCGAGGGGCTGGCCAGTCTCTTCTCCCATGGAGATaGTGGGCACTGCCACAGCGTGTCAGGTCCTTTTGGACACTGAAC +
Preference number: 5 (lower is better)
Translates to: PGLLRGAGQSLLPWR*WALPQRVRSFWTLN
Trigger: GTTCAGTGTCCAAAAGGACCTGACACGCTGTGGCAGTGCCCATCATCTCCATGGGAGAAGAGACTGGCCAGCCCCTCGGAGGAGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
CDS GCA 90 bp GGCTTCTGGCACTTACCTGTGCAATTCACTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCCCAGCGTCTGGCAGGACAATCCCAC +
Preference number: 5 (lower is better)
Translates to: GFWHLPVQFTAASSL*PHSLWPQRLAGQSH
Trigger: GTGGGATTGTCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGGTAAGTGCCAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538840.1
CDS TCA 90 bp TCTTTCAGTCCCCAGCCTCTGTCACACACCTTCCCTAACAGTCTCTaGATCTCCACCTCAACTGTCCCAGCACAGCGGCTGCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: SFSPQPLSHTFPNSL*ISTSTVPAQRLPPP
Trigger: AGGTGGAGGCAGCCGCTGTGCTGGGACAGTTGAGGTGGAGATTCAGAGACTGTTAGGGAAGGTGTGTGACAGAGGCTGGGGACTGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS TCA 90 bp GCTGTGGCTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGAGTaGAAGATGGGACTCATGTCCCTCACACTGGAATTCTTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: AVATSSFWAGCYWAE*KMGLMSLTLEFFSP
Trigger: TGGGCTGAAGAATTCCAGTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 90 bp CCAAGCGAATTTCTGTGTATCTTGAGCAGACTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSEFLCILSRLLQHP*CGYKFLLGGVLLGR
Trigger: TCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAGTCTGCTCAAGATACACAGAAATTCGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 90 bp TTCTGCACTGAAATATCTGTGCAATTCACTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCCCAGCGTCTGGCAGGACAATCCCAC +
Preference number: 5 (lower is better)
Translates to: FCTEISVQFTAASSL*PHSLWPQRLAGQSH
Trigger: GTGGGATTGTCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGATATTTCAGTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS CCA 90 bp CTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACACTGGAATTCTTCAGCCCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: LQVPSGRGATGQSER*DSCPSHWNSSAQIC
Trigger: ACAGATCTGGGCTGAAGAATTCCAGTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 90 bp GTTTTCTGGGTCTTACTTGAGCAGACTACTCCAACATCCCTGCTGTaGCTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: VFWVLLEQTTPTSLL*LQVPSGRGATGQSE
Trigger: TTCACTCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAGTCTGCTCAAGTAAGACCCAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS TCA 90 bp GGAGATGATGGGCACTGCCACAGCGTGTCAGGTCCTTTTGGACACTaGACATTGTCCACCCACATGGGAATGGACATGGCCTTGTCTAAA +
Preference number: 5 (lower is better)
Translates to: GDDGHCHSVSGPFGH*TLSTHMGMDMALSK
Trigger: TTTAGACAAGGCCATGTCCATTCCCATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACCTGACACGCTGTGGCAGTGCCCATCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
CDS GCA 90 bp AAGATGTTTTCTGGGTCTTACTTGAGCAGACTACTCCAACATCCCTaGTGTGGCTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KMFSGSYLSRLLQHP*CGYKFLLGGVLLGR
Trigger: TCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAGTCTGCTCAAGTAAGACCCAGAAAACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS CCA 90 bp AAATCCCTTACTGGCGTTAACTCGACCAATGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCATGCCACAGCAGCATCGTAACTGTC +
Preference number: 5 (lower is better)
Translates to: KSLTGVNSTNGCDGS*TSQLLACHSSIVTV
Trigger: GACAGTTACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAGTTAACGCCAGTAAGGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 90 bp CGAATTTCTGTGTATCTTGAGCAGACTACTCCAACATCCCTGCTGTaGCTACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: RISVYLEQTTPTSLL*LQVPSGRGATGQSE
Trigger: TTCACTCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGTAGCCACAGCAGGGATGTTGGAGTAGTCTGCTCAAGATACACAGAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 90 bp TCTAAAGATGCAGGGTTGATTTTCCCTTTGTCTGCACAGCCCAGCTaGCTGCACACCACACCCACAGTGGTTTCAGACATGCTACTCTTG +
Preference number: 5 (lower is better)
Translates to: SKDAGLIFPLSAQPS*LHTTPTVVSDMLLL
Trigger: CAAGAGTAGCATGTCTGAAACCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTGCAGACAAAGGGAAAATCAACCCTGCATCTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTGCCCATCCAGGGGCTTaGATAGCAGTTGGACATCCC +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSAHPGA*IAVGHP
Trigger: GGGATGTCCAACTGCTATCAAAGCCCCTGGATGGGC...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCAGGCACCAAGCGTTTaGAGCTCCACTCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSQAPSV*SSTLPS
Trigger: TGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCTG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCAGGCACCAAGCGTTTaGAGCTCCACTCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKQAPSV*SSTLPS
Trigger: TGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS GCA 90 bp ATTCCCACGACAAGAAACATGATCCATCCAAATGCGTCCAGAACCTaGACTGGAATTAGCCCATCCAGGGGCTTTGATAGCAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: IPTTRNMIHPNASRT*TGISPSRGFDSSWT
Trigger: TGTCCAACTGCTATCAAAGCCCCTGGATGGGCTAATTCCAGTGCAGGTTCTGGACGCATTTGGATGGATCATGTTTCTTGTCGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 90 bp GAATTAGCCCATCCAGGGGCTTTGATAGCAGTTGGACATCCCAGCTaGTTACAAATCACAGAGACCGCTTCCATGCTCCAGCCATTATTA +
Preference number: 5 (lower is better)
Translates to: ELAHPGALIAVGHPS*LQITETASMLQPLL
Trigger: TAATAATGGCTGGAGCATGGAAGCGGTCTCTGTGATTTGTAACCAGCTGGGATGTCCAACTGCTATCAAAGCCCCTGGATGGGCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 90 bp CCCCATTCATGGTGTTTACATTGCCAGATAGCAGGTTCATGTCCCTaGCAAGAAACGCTGTCAAGCCAGATGTGTCCAAATCCCTTACTG +
Preference number: 5 (lower is better)
Translates to: PHSWCLHCQIAGSCP*QETLSSQMCPNPLL
Trigger: CAGTAAGGGATTTGGACACATCTGGCTTGACAGCGTTTCTTGCCAGGGACATGAACCTGCTATCTGGCAATGTAAACACCATGAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 90 bp ATGCCTCCAGATCTGACCATTTCCTTTTCCAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCCACATTTAAGCTGCTGGCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: MPPDLTISFSKTCSS*GRKGNSTFKLLAKN
Trigger: GTTCTTTGCCAGCAGCTTAAATGTGGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTTGGAAAAGGAAATGGTCAGATCTGGAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGCCCATCCAGGGGCTTaGATAGCAGTTGGACATCCC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFAHPGA*IAVGHP
Trigger: GGGATGTCCAACTGCTATCAAAGCCCCTGGATGGGC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGACATCCCAGTTGCTaGCATGCCACAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGHPSC*HATAAS
Trigger: CGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGACATCCCAGTTGCTaGCATGCCACAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGHPSC*HATAAS
Trigger: CGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGGACATCCCAGTTGCTaGCATGCCACAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVGHPSC*HATAAS
Trigger: CGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGGTAAGTCCACCCCATaGCCAGTTCTTGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKGKSTP*PVLAVP
Trigger: TGGGACTGCAAGAACTGGCAATGGGGTGGACTTACC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCAGGCACCAAGCGTTTaGAGCTCCACTCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTQAPSV*SSTLPS
Trigger: TGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCTG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTGGGTTGATTTTCCCTTaGTCTGCACAGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSGLIFP*SAQPSC
Trigger: GCAGCTGGGCTGTGCAGACAAAGGGAAAATCAACCC...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTGGACCACAGCCAAGTaGTTGACACACCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKWTTAK*LTHHLS
Trigger: GCTCAGGTGGTGTGTCAACAACTTGGCTGTGGTCCA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGG +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKTAASS*CPHSLW
Trigger: CCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS TCA 90 bp TTCCCTTTGCACTTCACTTCATTGAGCCATATCGGTCCAGTCCCCTaGCCAAACTCTGCTTCTTTGAATGCTTTCAAAGCTGGACCACAG +
Preference number: 5 (lower is better)
Translates to: FPLHFTSLSHIGPVP*PNSASLNAFKAGPQ
Trigger: CTGTGGTCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGGTCAGGGGACTGGACCGATATGGCTCAATGAAGTGAAGTGCAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
ENST00000542280.5
CDS GCA 90 bp CTAGAGCAGTTACAGGACAATCTCCCATGTGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCCAGATCTGACCATTTCCTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LEQLQDNLPCAAQSQ*SETYASRSDHFLFQ
Trigger: TTGGAAAAGGAAATGGTCAGATCTGGAGGCATATGTTTCACTGCACTGGGACTGAGCAGCACATGGGAGATTGTCCTGTAACTGCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTAGTTGGACATCCCAGTaGCTTGCATGCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSSWTSQ*LACHSS
Trigger: GCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAAGTTGGACATCCCAGTaGCTTGCATGCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: FVPSPGVALHFILVNRITSWTSQ*LACHSS
Trigger: GCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACT...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCAGTTGGACATCCCAGTaGCTTGCATGCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVSWTSQ*LACHSS
Trigger: GCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGGTAAGTCCACCCCATaGCCAGTTCTTGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTGKSTP*PVLAVP
Trigger: TGGGACTGCAAGAACTGGCAATGGGGTGGACTTACC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATT +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTPSHGV*PFTKRI
Trigger: AATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACTCCCGCATCCTCCTaGTGCCTGCAATTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTPASS*CLQFCC
Trigger: GCAGCAAAATTGCAGGCACAAGGAGGATGCGGGAGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACTCCCGCATCCTCCTaGTGCCTGCAATTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTPASS*CLQFCC
Trigger: GCAGCAAAATTGCAGGCACAAGGAGGATGCGGGAGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGGTTGATTTTCCCTTaGTCTGCACAGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGLIFP*SAQPSC
Trigger: GCAGCTGGGCTGTGCAGACAAAGGGAAAATCAACCC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTGGACCACAGCCAAGTaGTTGACACACCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVWTTAK*LTHHLS
Trigger: GCTCAGGTGGTGTGTCAACAACTTGGCTGTGGTCCA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGG +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTAASS*CPHSLW
Trigger: CCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGG +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTAASS*CPHSLW
Trigger: CCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGACTAGCCTCAGCTCCTaGTCTGTTCCTCCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKTSLSS*SVPPRE
Trigger: TTCTCTTGGAGGAACAGACAAGGAGCTGAGGCTAGT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTACTCTCCCGCTACACTaGTTTTCACCATCCACTAGC +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSTLPLH*FSPSTS
Trigger: GCTAGTGGATGGTGAAAACAAGTGTAGCGGGAGAGT...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGACTCTCCCGCTACACTaGTTTTCACCATCCACTAGC +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKTLPLH*FSPSTS
Trigger: GCTAGTGGATGGTGAAAACAAGTGTAGCGGGAGAGT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGCCCATCCAGGGGCTTaGATAGCAGTTGGACATCCC +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVAHPGA*IAVGHP
Trigger: GGGATGTCCAACTGCTATCAAAGCCCCTGGATGGGC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGCCCATCCAGGGGCTTaGATAGCAGTTGGACATCCC +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHAHPGA*IAVGHP
Trigger: GGGATGTCCAACTGCTATCAAAGCCCCTGGATGGGC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCCCCATCCATCATGTTaGCAATCCCAAAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKPHPSC*QSQRAD
Trigger: GTCAGCTCTTTGGGATTGCAAACATGATGGATGGGG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCCCCATTGCCAGTTCTaGCAGTCCCAAAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSPHCQF*QSQREV
Trigger: AACTTCTCTTTGGGACTGCAAGAACTGGCAATGGGG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGATTTACCAGGCGAAGTaGACCACTCTCTATGCAGGC +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKIYQAK*TTLYAG
Trigger: GCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAAT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTCAGACATGCTACTCTaGCCAACAGTGCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSDMLL*PTVPQA
Trigger: AGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTGA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTCAGACATGCTACTCTaGCCAACAGTGCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVSDMLL*PTVPQA
Trigger: AGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTGA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGGAATGGACATGGCCTaGTCTAAAGATGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKGMDMA*SKDAGL
Trigger: CAACCCTGCATCTTTAGACAAGGCCATGTCCATTCC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTACCACAGCCAAGTTGTaGACACACCACCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSTTAKL*THHLSI
Trigger: GATGCTCAGGTGGTGTGTCAACAACTTGGCTGTGGT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACCACAGCCAAGTTGTaGACACACCACCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTTAKL*THHLSI
Trigger: GATGCTCAGGTGGTGTGTCAACAACTTGGCTGTGGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTACCACAGCCAAGTTGTaGACACACCACCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTTTAKL*THHLSI
Trigger: GATGCTCAGGTGGTGTGTCAACAACTTGGCTGTGGT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGGGATGAGCGACCTGTaGTGGCTTTTTGTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: FVPSPGVALHFILVNRITGMSDL*WLFVGF
Trigger: AAACCCCACAAAAAGCCACAACAGGTCGCTCATCCC...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGGGATGAGCGACCTGTaGTGGCTTTTTGTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVGMSDL*WLFVGF
Trigger: AAACCCCACAAAAAGCCACAACAGGTCGCTCATCCC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCTAAGTTCTCTCCTCTaGAGGAAACTGCAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKLSSLL*RKLQAA
Trigger: AGCGGCTTGCAGTTTCCTCAAGAGGAGAGAACTTAG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS TCA 90 bp AGGTCCAGATCATCTGCATTCAGGCAAGAATTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTCTCTCCTCTTGAGGAAACTGCAAGC +
Preference number: 5 (lower is better)
Translates to: RSRSSAFRQEFISRY*IWWTKFSPLEETAS
Trigger: GCTTGCAGTTTCCTCAAGAGGAGAGAACTTAGTCCACCAAATTCAATACCGGGAGATGAATTCTTGCCTGAATGCAGATGATCTGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTACTAGCCTCAGCTCCTaGTCTGTTCCTCCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSTSLSS*SVPPRE
Trigger: TTCTCTTGGAGGAACAGACAAGGAGCTGAGGCTAGT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTACTCTCCCGCTACACTaGTTTTCACCATCCACTAGC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSTLPLH*FSPSTS
Trigger: GCTAGTGGATGGTGAAAACAAGTGTAGCGGGAGAGT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACTCTCCCGCTACACTaGTTTTCACCATCCACTAGC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTLPLH*FSPSTS
Trigger: GCTAGTGGATGGTGAAAACAAGTGTAGCGGGAGAGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCCCATCCATCATGTTaGCAATCCCAAAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPHPSC*QSQRAD
Trigger: GTCAGCTCTTTGGGATTGCAAACATGATGGATGGGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCCCCATCCATCATGTTaGCAATCCCAAAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFPHPSC*QSQRAD
Trigger: GTCAGCTCTTTGGGATTGCAAACATGATGGATGGGG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGGTCACTCCAGCATCTaGTTGGTGAGTACAGTTACT +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKGHSSI*LVSTVT
Trigger: AGTAACTGTACTCACCAACAAGATGCTGGAGTGACC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTGATCATCAAACCAGATaGGTCCAGAGCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSDHQTR*VQSLLQ
Trigger: TTGGAGAAGGCTCTGGACCAATCTGGTTTGATGATC...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGACATCCCAGTTGCTaGCATGCCACAGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGHPSC*HATAAS
Trigger: CGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCAGTTGGACATCCCAGTaGCTTGCATGCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVSWTSQ*LACHSS
Trigger: GCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCCCCCATTGCCAGTTCTaGCAGTCCCAAAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVPHCQF*QSQREV
Trigger: AACTTCTCTTTGGGACTGCAAGAACTGGCAATGGGG...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCCCCATTGCCAGTTCTaGCAGTCCCAAAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTPHCQF*QSQREV
Trigger: AACTTCTCTTTGGGACTGCAAGAACTGGCAATGGGG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGGTAAGTCCACCCCATaGCCAGTTCTTGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHGKSTP*PVLAVP
Trigger: TGGGACTGCAAGAACTGGCAATGGGGTGGACTTACC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATT +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVPSHGV*PFTKRI
Trigger: AATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTATTTACCAGGCGAAGTaGACCACTCTCTATGCAGGC +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTIYQAK*TTLYAG
Trigger: GCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAAT...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTATTTACCAGGCGAAGTaGACCACTCTCTATGCAGGC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSIYQAK*TTLYAG
Trigger: GCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAAT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGGAATGGACATGGCCTaGTCTAAAGATGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSGMDMA*SKDAGL
Trigger: CAACCCTGCATCTTTAGACAAGGCCATGTCCATTCC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGGAATGGACATGGCCTaGTCTAAAGATGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFGMDMA*SKDAGL
Trigger: CAACCCTGCATCTTTAGACAAGGCCATGTCCATTCC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGGAATGGACATGGCCTaGTCTAAAGATGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTGMDMA*SKDAGL
Trigger: CAACCCTGCATCTTTAGACAAGGCCATGTCCATTCC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGCGTGTCAGGTCCTTTaGGACACTGAACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVACQVL*DTEHCP
Trigger: TGGACAATGTTCAGTGTCCAAAAGGACCTGACACGC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGCGTGTCAGGTCCTTTaGGACACTGAACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTACQVL*DTEHCP
Trigger: TGGACAATGTTCAGTGTCCAAAAGGACCTGACACGC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTGGACCACAGCCAAGTaGTTGACACACCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVWTTAK*LTHHLS
Trigger: GCTCAGGTGGTGTGTCAACAACTTGGCTGTGGTCCA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGG +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVTAASS*CPHSLW
Trigger: CCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGT...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACACTAAGTTCTCTCCTCTaGAGGAAACTGCAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: FVPSPGVALHFILVNRITLSSLL*RKLQAA
Trigger: AGCGGCTTGCAGTTTCCTCAAGAGGAGAGAACTTAG...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTCTAAGTTCTCTCCTCTaGAGGAAACTGCAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTLSSLL*RKLQAA
Trigger: AGCGGCTTGCAGTTTCCTCAAGAGGAGAGAACTTAG...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGCACTCCAGCATCTTGTaGGTGAGTACAGTTACTATG +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKHSSIL*VSTVTM
Trigger: CATAGTAACTGTACTCACCAACAAGATGCTGGAGTG...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCACTCCAGCATCTTGTaGGTGAGTACAGTTACTATG +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSHSSIL*VSTVTM
Trigger: CATAGTAACTGTACTCACCAACAAGATGCTGGAGTG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCGGTCACTCCAGCATCTaGTTGGTGAGTACAGTTACT +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVGHSSI*LVSTVT
Trigger: AGTAACTGTACTCACCAACAAGATGCTGGAGTGACC...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGTGTTCCCCACCGTCCTaGGAATTTGATCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKCSPPS*EFDLYS
Trigger: AGAATAGAGATCAAATTCCAAGGACGGTGGGGAACA...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGATCATCAAACCAGATaGGTCCAGAGCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFDHQTR*VQSLLQ
Trigger: TTGGAGAAGGCTCTGGACCAATCTGGTTTGATGATC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGATCATCAAACCAGATaGGTCCAGAGCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTDHQTR*VQSLLQ
Trigger: TTGGAGAAGGCTCTGGACCAATCTGGTTTGATGATC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTTCAGATCTGCTCCCTTaGAGCAAATCACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTSDLLP*SKSLQH
Trigger: ATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTGA...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCTCAGATCTGCTCCCTTaGAGCAAATCACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSDLLP*SKSLQH
Trigger: ATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTGA...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGACAGCCATGTGTTTGTaGCCTGGATTTTGGAGTACA +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKTAMCL*PGFWST
Trigger: TGTACTCCAAAATCCAGGCAACAAACACATGGCTGT...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCCTCACACGGGGTCTaGCCATTCACCAAGCGAATT +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPSHGV*PFTKRI
Trigger: AATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAACTCCCGCATCCTCCTaGTGCCTGCAATTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSTPASS*CLQFCC
Trigger: GCAGCAAAATTGCAGGCACAAGGAGGATGCGGGAGT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGGGTTGATTTTCCCTTaGTCTGCACAGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSGLIFP*SAQPSC
Trigger: GCAGCTGGGCTGTGCAGACAAAGGGAAAATCAACCC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATGGACCACAGCCAAGTaGTTGACACACCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSWTTAK*LTHHLS
Trigger: GCTCAGGTGGTGTGTCAACAACTTGGCTGTGGTCCA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTGCACTTCACTTCATaGAGCCATATCGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVLHFTS*SHIGPV
Trigger: GACTGGACCGATATGGCTCAATGAAGTGAAGTGCAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGG +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSTAASS*CPHSLW
Trigger: CCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGGGATGAGCGACCTGTaGTGGCTTTTTGTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHGMSDL*WLFVGF
Trigger: AAACCCCACAAAAAGCCACAACAGGTCGCTCATCCC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGGGATGAGCGACCTGTaGTGGCTTTTTGTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVGMSDL*WLFVGF
Trigger: AAACCCCACAAAAAGCCACAACAGGTCGCTCATCCC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCACTCCAGCATCTTGTaGGTGAGTACAGTTACTATG +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFHSSIL*VSTVTM
Trigger: CATAGTAACTGTACTCACCAACAAGATGCTGGAGTG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTGTTCCCCACCGTCCTaGGAATTTGATCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSCSPPS*EFDLYS
Trigger: AGAATAGAGATCAAATTCCAAGGACGGTGGGGAACA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACAGCCATGTGTTTGTaGCCTGGATTTTGGAGTACA +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTAMCL*PGFWST
Trigger: TGTACTCCAAAATCCAGGCAACAAACACATGGCTGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCACAGCCATGTGTTTGTaGCCTGGATTTTGGAGTACA +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFTAMCL*PGFWST
Trigger: TGTACTCCAAAATCCAGGCAACAAACACATGGCTGT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCGGGATTCTTTTCCATaGCATTTCATCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSRDSFP*HFISSS
Trigger: GCTGGATGAGATGAAATGCAATGGAAAAGAATCCCG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATCAGACATGCTACTCTaGCCAACAGTGCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSSDMLL*PTVPQA
Trigger: AGCTTGGGGCACTGTTGGCAAGAGTAGCATGTCTGA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGCGTGTCAGGTCCTTTaGGACACTGAACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVACQVL*DTEHCP
Trigger: TGGACAATGTTCAGTGTCCAAAAGGACCTGACACGC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTCCAAACTCTGCTTCTTaGAATGCTTTCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSPNSAS*NAFKAG
Trigger: TCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGG...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp GCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAACTCACTGAAGACTCATTCCCTTaGCACTTCACTTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: APFNSPGLHQGILKAELTEDSFP*HFTSLS
Trigger: GCTCAATGAAGTGAAGTGCAAAGGGAATGAGTCTTC...AGTGAGTTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGTGAAGGGACTCAAGTaGACAAAATGTCTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFVKGLK*TKCLLK
Trigger: CTTCAGAAGACATTTTGTCAACTTGAGTCCCTTCAC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAACTAGCCTCAGCTCCTaGTCTGTTCCTCCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSTSLSS*SVPPRE
Trigger: TTCTCTTGGAGGAACAGACAAGGAGCTGAGGCTAGT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACCCCATCCATCATGTTaGCAATCCCAAAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSPHPSC*QSQRAD
Trigger: GTCAGCTCTTTGGGATTGCAAACATGATGGATGGGG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGGTCACTCCAGCATCTaGTTGGTGAGTACAGTTACT +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVGHSSI*LVSTVT
Trigger: AGTAACTGTACTCACCAACAAGATGCTGGAGTGACC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGGTCACTCCAGCATCTaGTTGGTGAGTACAGTTACT +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHGHSSI*LVSTVT
Trigger: AGTAACTGTACTCACCAACAAGATGCTGGAGTGACC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACAGTACTTCCACATTCAAGTaGTCTACAAATGACAGATGC +
Preference number: 5 (lower is better)
Translates to: CALTRCGSAFYSSEQNYSTSTFK*STNDRC
Trigger: GCATCTGTCATTTGTAGACAACTTGAATGTGGAAGT...ACTGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGATCATCAAACCAGATaGGTCCAGAGCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVDHQTR*VQSLLQ
Trigger: TTGGAGAAGGCTCTGGACCAATCTGGTTTGATGATC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTCAGATCTGCTCCCTTaGAGCAAATCACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVSDLLP*SKSLQH
Trigger: ATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTGA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp TTTGTGCCCTCACCAGGTGTGGCTCTGCATTTTATTCTAGTGAACAGAATTACATTCATGGTGTTTACATaGCCAGATAGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: FVPSPGVALHFILVNRITFMVFT*PDSRFM
Trigger: CATGAACCTGCTATCTGGCAATGTAAACACCATGAA...TGTAATTCTGTTCACTAGAATAAAATGCAGAGCCACACCTGGTGAGGGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359156.8
ENST00000432237.3
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATGGTGTTTACATaGCCAGATAGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVFMVFT*PDSRFM
Trigger: CATGAACCTGCTATCTGGCAATGTAAACACCATGAA...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATTTACCAGGCGAAGTaGACCACTCTCTATGCAGGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSIYQAK*TTLYAG
Trigger: GCCTGCATAGAGAGTGGTCAACTTCGCCTGGTAAAT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGCGTGTCAGGTCCTTTaGGACACTGAACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSACQVL*DTEHCP
Trigger: TGGACAATGTTCAGTGTCCAAAAGGACCTGACACGC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCCCAAACTCTGCTTCTTaGAATGCTTTCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFPNSAS*NAFKAG
Trigger: TCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGG...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTCCAAACTCTGCTTCTTaGAATGCTTTCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSPNSAS*NAFKAG
Trigger: TCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGG...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTTGCACTTCACTTCATaGAGCCATATCGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVLHFTS*SHIGPV
Trigger: GACTGGACCGATATGGCTCAATGAAGTGAAGTGCAA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTTGCACTTCACTTCATaGAGCCATATCGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHLHFTS*SHIGPV
Trigger: GACTGGACCGATATGGCTCAATGAAGTGAAGTGCAA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCACTAAGTTCTCTCCTCTaGAGGAAACTGCAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSLSSLL*RKLQAA
Trigger: AGCGGCTTGCAGTTTCCTCAAGAGGAGAGAACTTAG...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTTTTCTGGGTCTTACTaGAGCAGACTACTCCAACAT +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSFSGSY*SRLLQH
Trigger: ATGTTGGAGTAGTCTGCTCAAGTAAGACCCAGAAAA...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS TCA 90 bp AAGATCATCAAACCAGATTGGTCCAGAGCCTTCTCCAAAATTAGATaGACCAGAGAAACTGACAGCACTTCCACATTCAAGTTGTCTACA +
Preference number: 5 (lower is better)
Translates to: KIIKPDWSRAFSKIR*TRETDSTSTFKLST
Trigger: TGTAGACAACTTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAAGGCTCTGGACCAATCTGGTTTGATGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTGTTCCCCACCGTCCTaGGAATTTGATCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHCSPPS*EFDLYS
Trigger: AGAATAGAGATCAAATTCCAAGGACGGTGGGGAACA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCTGTTCCCCACCGTCCTaGGAATTTGATCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVCSPPS*EFDLYS
Trigger: AGAATAGAGATCAAATTCCAAGGACGGTGGGGAACA...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp ACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCACTTCCACATTCAAGTaGTCTACAAATGACAGATGC +
Preference number: 5 (lower is better)
Translates to: TVIVSERGEFLLHSIVQVTSTFK*STNDRC
Trigger: GCATCTGTCATTTGTAGACAACTTGAATGTGGAAGT...GACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATCAGATCTGCTCCCTTaGAGCAAATCACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSSDLLP*SKSLQH
Trigger: ATGCTGGAGTGATTTGCTCAAAGGGAGCAGATCTGA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGATTTTGGAGTACACTaGATAAGATGTTTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: VSERGEFLLHSIVQVFIKDFGVH*IRCFEC
Trigger: GCACTCAAAACATCTTATCAAGTGTACTCCAAAATC...CTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGAATTTCTGTGTATCTaGAGCAGACTACTCCAACAT +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSEFLCI*SRLLQH
Trigger: ATGTTGGAGTAGTCTGCTCAAGATACACAGAAATTC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCGGGATTCTTTTCCATaGCATTTCATCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVRDSFP*HFISSS
Trigger: GCTGGATGAGATGAAATGCAATGGAAAAGAATCCCG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCATTGCACTTCACTTCATaGAGCCATATCGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSLHFTS*SHIGPV
Trigger: GACTGGACCGATATGGCTCAATGAAGTGAAGTGCAA...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGAAGACTCATTCCCTTaGCACTTCACTTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHEDSFP*HFTSLS
Trigger: GCTCAATGAAGTGAAGTGCAAAGGGAATGAGTCTTC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS GCA 90 bp GTTTTGGGATATTTCTTCCAACCCAGTAAAGTCATCCTGCCCAGATaGAGAATTAGTGCACTGGTGCTAAATAGAAGTTCAAGGATAAAA +
Preference number: 5 (lower is better)
Translates to: VLGYFFQPSKVILPR*RISALVLNRSSRIK
Trigger: TTTTATCCTTGAACTTCTATTTAGCACCAGTGCACTAATTCTGCATCTGGGCAGGATGACTTTACTGGGTTGGAAGAAATATCCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537044.1
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTAGCACCATTCTGAGTTaGCTCATTCCAAAGATTTAT +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSSTILS*LIPKIY
Trigger: ATAAATCTTTGGAATGAGCAAACTCAGAATGGTGCT...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCAGCACCATTCTGAGTTaGCTCATTCCAAAGATTTAT +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFSTILS*LIPKIY
Trigger: ATAAATCTTTGGAATGAGCAAACTCAGAATGGTGCT...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCGTGAAGGGACTCAAGTaGACAAAATGTCTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVVKGLK*TKCLLK
Trigger: CTTCAGAAGACATTTTGTCAACTTGAGTCCCTTCAC...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTTCATGGTGTTTACATaGCCAGATAGCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHFMVFT*PDSRFM
Trigger: CATGAACCTGCTATCTGGCAATGTAAACACCATGAA...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCGATTTTGGAGTACACTaGATAAGATGTTTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: VIVSERGEFLLHSIVQVFDFGVH*IRCFEC
Trigger: GCACTCAAAACATCTTATCAAGTGTACTCCAAAATC...GAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp GAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCAGGTCTTCATCAAGGTATCTGATTTTGGAGTACACTaGATAAGATGTTTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: ERGEFLLHSIVQVFIKVSDFGVH*IRCFEC
Trigger: GCACTCAAAACATCTTATCAAGTGTACTCCAAAATC...AGATACCTTGATGAAGACCTGGACTATTGAATGGAGCAGAAATTCACCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp AATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAATAGTCCCAAACTCTGCTTCTTaGAATGCTTTCAAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: NATVIVSERGEFLLHSIVPNSAS*NAFKAG
Trigger: TCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGG...GACTATTGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGAAGACTCATTCCCTTaGCACTTCACTTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSEDSFP*HFTSLS
Trigger: GCTCAATGAAGTGAAGTGCAAAGGGAATGAGTCTTC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATGAATTTCTGTGTATCTaGAGCAGACTACTCCAACAT +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHEFLCI*SRLLQH
Trigger: ATGTTGGAGTAGTCTGCTCAAGATACACAGAAATTC...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CTCCATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATAGCACCATTCTGAGTTaGCTCATTCCAAAGATTTAT +
Preference number: 5 (lower is better)
Translates to: LHKNATVIVSERGEFLLHSTILS*LIPKIY
Trigger: ATAAATCTTTGGAATGAGCAAACTCAGAATGGTGCT...ATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAACTTCCACATTCAAGTaGTCTACAAATGACAGATGC +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSTSTFK*STNDRC
Trigger: GCATCTGTCATTTGTAGACAACTTGAATGTGGAAGT...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000541972.5
CDS-3UTR CAA 90 bp CATAAAAATGCAACTGTAATAGTCAGTGAGAGAGGTGAATTTCTGCTCCATTCAGAATTTCTGTGTATCTaGAGCAGACTACTCCAACAT +
Preference number: 5 (lower is better)
Translates to: HKNATVIVSERGEFLLHSEFLCI*SRLLQH
Trigger: ATGTTGGAGTAGTCTGCTCAAGATACACAGAAATTC...TGAATGGAGCAGAAATTCACCTCTCTCACTGACTATTACAGTTGCATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000541972.5
CDS TCA 72 bp GGGCACTGCCACAGCGTGTCAGGTCCTTTTGGACACTaGACATTGTCCACCCACATGGGAATGGACATGGCC +
Preference number: 6 (lower is better)
Translates to: GHCHSVSGPFGH*TLSTHMGMDMA
Trigger: GGCCATGTCCATTCCCATGTGGGTGGACAATGTTCAGTGTCCAAAAGGACCTGACACGCTGTGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
CDS GCA 72 bp CACTTACCTGTGCAATTCACTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCCCAGCGTCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: HLPVQFTAASSL*PHSLWPQRLAG
Trigger: TCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGGTAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538840.1
CDS CCA 72 bp CCTTCTGGGCGGGGTGCTACTGGGCAGAGTGAAAGATaGGACTCATGTCCCTCACACTGGAATTCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: PSGRGATGQSER*DSCPSHWNSSA
Trigger: GGCTGAAGAATTCCAGTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCACCCCGCCCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp GTCTGTGCCTCAACTGCAGCCACTGATCTGAACCCCTaGGCAATAGACCCTCCAAGAACCCACAGACCTGAG +
Preference number: 6 (lower is better)
Translates to: VCASTAATDLNP*AIDPPRTHRPE
Trigger: CTCAGGTCTGTGGGTTCTTGGAGGGTCTATTGCCCAGGGGTTCAGATCAGTGGCTGCAGTTGAGGCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537044.1
CDS GCA 72 bp GCAGGGTTGATTTTCCCTTTGTCTGCACAGCCCAGCTaGCTGCACACCACACCCACAGTGGTTTCAGACATG +
Preference number: 6 (lower is better)
Translates to: AGLIFPLSAQPS*LHTTPTVVSDM
Trigger: CATGTCTGAAACCACTGTGGGTGTGGTGTGCAGGCAGCTGGGCTGTGCAGACAAAGGGAAAATCAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
CDS CCA 72 bp ACTGGCGTTAACTCGACCAATGGCTGTGACGGCAGTTaGACATCCCAGTTGCTTGCATGCCACAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: TGVNSTNGCDGS*TSQLLACHSSI
Trigger: GATGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCCATTGGTCGAGTTAACGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp CTTCCTTGTGCCCACACTCACTATGGCCCCAGCGTCTaGCAGGACAATCCCACAAGGAAGACTCATTCCCTT +
Preference number: 6 (lower is better)
Translates to: LPCAHTHYGPSV*QDNPTRKTHSL
Trigger: AAGGGAATGAGTCTTCCTTGTGGGATTGTCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000537626.5
ENST00000538840.1
ENST00000541972.5
ENST00000542280.5
CDS CAA 72 bp TCGACCAATGGCTGTGACGGCAGTTGGACATCCCAGTaGCTTGCATGCCACAGCAGCATCGTAACTGTCCCA +
Preference number: 6 (lower is better)
Translates to: STNGCDGSWTSQ*LACHSSIVTVP
Trigger: TGGGACAGTTACGATGCTGCTGTGGCATGCAAGCAACTGGGATGTCCAACTGCCGTCACAGCCATTGGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 90 bp CAGGCACCAAGCGTTTTGAGCTCCACTCTGCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATTTCTGTGTATCCTGGAAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: QAPSVLSSTLPSHGV*PFTKRISVYPGRRQ
Trigger: CTGTCTCCTTCCAGGATACACAGAAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS TCA 72 bp ACAAGTTCCTTCTGGGCGGGGTGCTACTGGGCAGAGTaGAAGATGGGACTCATGTCCCTCACACTGGAATTC +
Preference number: 6 (lower is better)
Translates to: TSSFWAGCYWAE*KMGLMSLTLEF
Trigger: GAATTCCAGTGTGAGGGACATGAGTCCCATCTTTCACTCTGCCCAGTAGCACCCCGCCCAGAAGGAACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 72 bp GAAATATCTGTGCAATTCACTGCAGCGTCTTCCTTGTaGCCACACTCACTATGGCCCCAGCGTCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EISVQFTAASSL*PHSLWPQRLAG
Trigger: TCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGATATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS CCA 72 bp CATCCAGGGGCTTTGATAGCAGTTGGACATCCCAGCTaGTTACAAATCACAGAGACCGCTTCCATGCTCCAG +
Preference number: 6 (lower is better)
Translates to: HPGALIAVGHPS*LQITETASMLQ
Trigger: CTGGAGCATGGAAGCGGTCTCTGTGATTTGTAACCAGCTGGGATGTCCAACTGCTATCAAAGCCCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 72 bp ACTGAAATATCTGTGCAATTCACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGGCCCCAGCGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: TEISVQFTAASS*CPHSLWPQRLA
Trigger: TGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGATATTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS CAA 72 bp AGCGTTTTGAGCTCCACTCTGCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATTTCTGTGTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: SVLSSTLPSHGV*PFTKRISVYPG
Trigger: TCCAGGATACACAGAAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGGCAGAGTGGAGCTCAAAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396620.7
CDS CAA 90 bp CAGGCACCAAGCGTTTTGAGCTCCACTCTGCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATTTCTGTGTATCTTGAGCAGACTACT +
Preference number: 6 (lower is better)
Translates to: QAPSVLSSTLPSHGV*PFTKRISVYLEQTT
Trigger: AGTAGTCTGCTCAAGATACACAGAAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGGCAGAGTGGAGCTCAAAACGCTTGGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 90 bp GTTTTCTGCACTGAAATATCTGTGCAATTCACTGCAGCGTCTTCCTaGTGCCCACACTCACTATGGCCCCAGCGTCTGGCAGGACAATCC +
Preference number: 6 (lower is better)
Translates to: VFCTEISVQFTAASS*CPHSLWPQRLAGQS
Trigger: GGATTGTCCTGCCAGACGCTGGGGCCATAGTGAGTGTGGGCACAAGGAAGACGCTGCAGTGAATTGCACAGATATTTCAGTGCAGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000537626.5
ENST00000541972.5
ENST00000542280.5
CDS TCA 72 bp TTCTGGAATGGTAGGCCTTGTTGGGCCCAAAGACGATaGATTGCACGAGGACAGTGTTTGGGACTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: FWNGRPCWAQRR*IARGQCLGLVS
Trigger: GGAAACCAGTCCCAAACACTGTCCTCGTGCAATTCATCGTCTTTGGGCCCAACAAGGCCTACCATTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp CAACTGTGCCACACTGTAATTCCCTGCATAGAACGCTaGCAGCTTCCAGAGAGAAGTCCGAATCACAGATGG +
Preference number: 6 (lower is better)
Translates to: QLCHTVIPCIER*QLPERSPNHRW
Trigger: CCATCTGTGATTCGGACTTCTCTCTGGAAGCTGCCAGCGTTCTATGCAGGGAATTACAGTGTGGCACAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp TTTGCTGCCAGAGATTCCAAGCTCAATCCAGGCTTCTaGCACTTACCTGTGCAATTCACTGCAGCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: FAARDSKLNPGF*HLPVQFTAASS
Trigger: GGAAGACGCTGCAGTGAATTGCACAGGTAAGTGCCAGAAGCCTGGATTGAGCTTGGAATCTCTGGCAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538840.1
CDS CAA 72 bp AGCGTTTTGAGCTCCACTCTGCCCTCACACGGGGTCTaGCCATTCACCAAGCGAATTTCTGTGTATCTTGAG +
Preference number: 6 (lower is better)
Translates to: SVLSSTLPSHGV*PFTKRISVYLE
Trigger: CTCAAGATACACAGAAATTCGCTTGGTGAATGGCAAGACCCCGTGTGAGGGCAGAGTGGAGCTCAAAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359156.8
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp CTCCATGCCAGATCTCCACACGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTATCTTGTTGTCACATG +
Preference number: 6 (lower is better)
Translates to: LHARSPHVQNRK*VLPEVLSCCHM
Trigger: CATGTGACAACAAGATAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGACGTGTGGAGATCTGGCATGGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000541972.5
CDS TCA 72 bp ATCTCCACACGTCCAGAACAGGAAGTGGGTCCTTCCTaGAGTCTTATCTTGTTGTCACATGTGATCCAGGTC +
Preference number: 6 (lower is better)
Translates to: ISTRPEQEVGPS*SLILLSHVIQV
Trigger: GACCTGGATCACATGTGACAACAAGATAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGACGTGTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000541972.5
CDS GCA 72 bp ACAAGAAACATGATCCATCCAAATGCGTCCAGAACCTaGACTGGAATTAGCCCATCCAGGGGCTTTGATAGC +
Preference number: 6 (lower is better)
Translates to: TRNMIHPNASRT*TGISPSRGFDS
Trigger: GCTATCAAAGCCCCTGGATGGGCTAATTCCAGTGCAGGTTCTGGACGCATTTGGATGGATCATGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 72 bp TTACAGGACAATCTCCCATGTGCTGCTCAGTCCCAGTaGAGTGAAACATATGCCTCCAGATCTGACCATTTC +
Preference number: 6 (lower is better)
Translates to: LQDNLPCAAQSQ*SETYASRSDHF
Trigger: GAAATGGTCAGATCTGGAGGCATATGTTTCACTGCACTGGGACTGAGCAGCACATGGGAGATTGTCCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 72 bp TGGGACTGGTTTCCTGAGCAGATTACAGAGGCCACTTaGTCTGAAGGACATAATGAAGCACCTAGAGCAGTT +
Preference number: 6 (lower is better)
Translates to: WDWFPEQITEAT*SEGHNEAPRAV
Trigger: AACTGCTCTAGGTGCTTCATTATGTCCTTCAGAGCAAGTGGCCTCTGTAATCTGCTCAGGAAACCAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp GATCTGACCATTTCCTTTTCCAAAACGTGCTCCTCCTaGGGTAGAAAGGGCAACTCCACATTTAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DLTISFSKTCSS*GRKGNSTFKLL
Trigger: CAGCAGCTTAAATGTGGAGTTGCCCTTTCTACCCCAGGAGGAGCACGTTTTGGAAAAGGAAATGGTCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CCA 72 bp CTGACCAAACTCTGCTTCTTTGAATGCTTTCAAAGCTaGACCACAGCCAAGTTGTTGACACACCACCTGAGC +
Preference number: 6 (lower is better)
Translates to: LTKLCFFECFQS*TTAKLLTHHLS
Trigger: GCTCAGGTGGTGTGTCAACAACTTGGCTGTGGTCCAGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
ENST00000542280.5
CDS CCA 72 bp CTCCATGCCAGATCTCCACACGTCCAGAACAGGAAGTaGGTCCTTCCTGAAGTCTTATCTTGTCTGAAAAAT +
Preference number: 6 (lower is better)
Translates to: LHARSPHVQNRK*VLPEVLSCLKN
Trigger: ATTTTTCAGACAAGATAAGACTTCAGGAAGGACCCACTTCCTGTTCTGGACGTGTGGAGATCTGGCATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539632.1
CDS CAA 72 bp CTACACTTGTTTTCACCATCCACTAGCCTCAGCTCCTaGTCTGTTCCTCCAAGAGAACTGGTGACAAAACAG +
Preference number: 6 (lower is better)
Translates to: LHLFSPSTSLSS*SVPPRELVTKQ
Trigger: CTGTTTTGTCACCAGTTCTCTTGGAGGAACAGACAAGGAGCTGAGGCTAGTGGATGGTGAAAACAAGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS TCA 72 bp CTTGGAATCTCACTTCTAATCTTCCTGAACATTCAGTaGCTCCATCTACCAGTCTCAGGCTCAGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LGISLLIFLNIQ*LHLPVSGSDLL
Trigger: GAGCAGATCTGAGCCTGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAAGATTAGAAGTGAGATTCCAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS TCA 72 bp CACTTCACTTCATTGAGCCATATCGGTCCAGTCCCCTaGCCAAACTCTGCTTCTTTGAATGCTTTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: HFTSLSHIGPVP*PNSASLNAFKA
Trigger: AGCTTTGAAAGCATTCAAAGAAGCAGAGTTTGGTCAGGGGACTGGACCGATATGGCTCAATGAAGTGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000538840.1
ENST00000539632.1
ENST00000541972.5
ENST00000542280.5
CDS CAA 72 bp GGCTTCTTCATAGTGATCACAGGTAAGTCCACCCCATaGCCAGTTCTTGCAGTCCCAAAGAGAAGTTTCATT +
Preference number: 6 (lower is better)
Translates to: GFFIVITGKSTP*PVLAVPKRSFI
Trigger: AATGAAACTTCTCTTTGGGACTGCAAGAACTGGCAATGGGGTGGACTTACCTGTGATCACTATGAAGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 72 bp CAGCCATGTGTTTGTTGCCTGGATTTTGGAGTACACTaGATAAGATGTTTTGAGTGCAGATCCACATCCCAG +
Preference number: 6 (lower is better)
Translates to: QPCVCCLDFGVH*IRCFECRSTSQ
Trigger: CTGGGATGTGGATCTGCACTCAAAACATCTTATCAAGTGTACTCCAAAATCCAGGCAACAAACACATGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 90 bp CCATTCAATAGTCCAGGTCTTCATCAAGGTATCTTAAAGGCTGAATaGAAATTCTCGATGCTAGCACTGCAGTCTGAAGTCGAACTCGGA +
Preference number: 6 (lower is better)
Translates to: PFNSPGLHQGILKAE*KFSMLALQSEVELG
Trigger: TCCGAGTTCGACTTCAGACTGCAGTGCTAGCATCGAGAATTTCAATTCAGCCTTTAAGATACCTTGATGAAGACCTGGACTATTGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534848.1
CDS TCA 72 bp AAACCAGATTGGTCCAGAGCCTTCTCCAAAATTAGATaGACCAGAGAAACTGACAGCACTTCCACATTCAAG +
Preference number: 6 (lower is better)
Translates to: KPDWSRAFSKIR*TRETDSTSTFK
Trigger: CTTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCATCTAATTTTGGAGAAGGCTCTGGACCAATCTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS TCA 72 bp TCATCTGCATTCAGGCAAGAATTCATCTCCCGGTATTaGATTTGGTGGACTAAGTTCTCTCCTCTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: SSAFRQEFISRY*IWWTKFSPLEE
Trigger: TTCCTCAAGAGGAGAGAACTTAGTCCACCAAATTCAATACCGGGAGATGAATTCTTGCCTGAATGCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS GCA 72 bp TATTTCTTCCAACCCAGTAAAGTCATCCTGCCCAGATaGAGAATTAGTGCACTGGTGCTAAATAGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: YFFQPSKVILPR*RISALVLNRSS
Trigger: TGAACTTCTATTTAGCACCAGTGCACTAATTCTGCATCTGGGCAGGATGACTTTACTGGGTTGGAAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537044.1
CDS CAA 72 bp CATATGGAGGCGGAGTCAACTCAAAAAGGGAAGTCATaGAAAGAGCTGAGGTTCCATTTCATACTCATGTTT +
Preference number: 6 (lower is better)
Translates to: HMEAESTQKGKS*KELRFHFILMF
Trigger: AAACATGAGTATGAAATGGAACCTCAGCTCTTTCAATGACTTCCCTTTTTGAGTTGACTCCGCCTCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359156.8
CDS TCA 72 bp CTTCCACATTCAAGTTGTCTACAAATGACAGATGCATaGTCTATGTTGAAGTTATCATCACACACTGTTCCC +
Preference number: 6 (lower is better)
Translates to: LPHSSCLQMTDA*SMLKLSSHTVP
Trigger: GGGAACAGTGTGTGATGATAACTTCAACATAGATCATGCATCTGTCATTTGTAGACAACTTGAATGTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5
CDS CAA 72 bp TTCCGTTACAGCTACTTAGAAACAGCCATGTGTTTGTaGCCTGGATTTTGGAGTACACTTGATAAGATGTTT +
Preference number: 6 (lower is better)
Translates to: FRYSYLETAMCL*PGFWSTLDKMF
Trigger: AAACATCTTATCAAGTGTACTCCAAAATCCAGGCAACAAACACATGGCTGTTTCTAAGTAGCTGTAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359156.8
ENST00000396620.7
ENST00000432237.3
ENST00000537044.1
ENST00000541972.5