RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD151 (Homo sapiens)

Ensembl gene IDs: ENSG00000177697

Ensembl transcript IDs: ENST00000322008.9, ENST00000397420.9, ENST00000397421.5, ENST00000524748.6, ENST00000525333.5, ENST00000525718.6, ENST00000525868.5, ENST00000526661.5, ENST00000526693.5, ENST00000527341.5, ENST00000528011.2, ENST00000528867.5, ENST00000529810.5, ENST00000530155.5, ENST00000530320.5, ENST00000530726.5, ENST00000531999.5, ENST00000532045.6, ENST00000532075.1, ENST00000642413.1, ENST00000645878.1

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAGGCCCAAGG +
Preference number: 1 (lower is better)
Translates to: GTGWVSSGSPAPGTQ*SQLSSWVQQQQGPR
Trigger: CCTTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCACCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: GKTAGALSRETRAGLGGAPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR GCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: GKTAGALSRETRAGLGGAGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR TCA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAACCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGAGGCCCCTTCCAACCTaGATCTCCCCTGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWERPLPT*ISPAGH
Trigger: ATGCCCAGCAGGGGAGATGCAGGTTGGAAGGGGCCT...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000530726.5
3UTR-3UTR CCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: GKTAGALSRETRAGLGGAGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGCCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR TCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: AHLASPTGMGPCGCKARPPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR TCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCTGCATCTCCCCTGCTaGGCATTGGTGCGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: AWGVKGFSPCWERSALRHLHLPC*ALVRSK
Trigger: TTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530726.5
3UTR-3UTR TCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAACCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: AWGVKGFSPCWERSALRHSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: AHLASPTGMGPCGCKARPSPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLASPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 2 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR TCA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: AHLASPTGMGPCGCKARPSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: KGFSPCWERSALRHSARPAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: VKGFSPCWERSALRHSARSPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACAGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGCCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGAACCTGCATCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVNLHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530726.5
3UTR-3UTR CCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 2 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR GCA 90 bp CCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCACAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PFQPASDHQAESVSGEPHSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...GTGGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR CCA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PSPPLLGIGAQQKALEAASQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR CCA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: PSPPLLGIGAQQKALEAAAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
3UTR-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAATCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: SELTWLPQLGWGHVAARQSPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR TCA 90 bp AACCTGCATCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: NLHLPCWALVRSKRHLKLPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...CAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530726.5
3UTR-3UTR GCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: SELTWLPQLGWGHVAARQSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 2 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRLPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAATGGGATGGGGCCATGTaGCTGCAAGGCAAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKWDGAM*LQGKAP
Trigger: TGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCA...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
3UTR-3UTR CCA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAATCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
3UTR-3UTR CCA 90 bp TGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: CGRDGCRHLGTAVNKTRKAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...CTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
3UTR-3UTR CAA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: AWGVKGFSPCWERSALRHLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 3 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLALPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 3 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR CCA 72 bp CAAGGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: QGSELTWLPQLG*GHVAARQGPSS
Trigger: GGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 3 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 3 (lower is better)
Translates to: VKGFSPCWERSALRHSARRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 3 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR TCA 72 bp GTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTaGACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: VAGMVVGIWVQQ*TKPGRPCPAEA
Trigger: TGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR CCA 72 bp TGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: WVSSGSPAPGTQ*SQLSSWVQQQQ
Trigger: TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
3UTR-3UTR CAA 90 bp TGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: CGRDGCRHLGTAVNKTRKWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...CTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
3UTR TCA 72 bp AACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACATaGACAGGGCAGTGCACAGTGACCACGTGGCATTTC +
Preference number: 3 (lower is better)
Translates to: NKTRKALPRRGT*TGQCTVTTWHF
Trigger: GAAATGCCACGTGGTCACTGTGCACTGCCCTGTTCATGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR GCA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGAGATGCCCACTGCCATaGCAGCCAGGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWERCPLP*QPGQPA
Trigger: GGCTGGCTGGCCTGGCTGTCATGGCAGTGGGCATCT...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEGSDAP*RWRSSP
Trigger: TGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACC...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRGSDAP*RWRSSP
Trigger: TGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACC...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGCCACCGGCCTCCTGTaGGCGGATCCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGAATGLL*ADPLTV
Trigger: GACAGTGAGTGGATCCGCTCACAGGAGGCCGGTGGC...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCACTTGCAGCAGCTGTCTaGGACCACACGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGALAAAV*DHTATG
Trigger: GCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAG...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACAGATGCCCACTGCCATaGCAGCCAGGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHRCPLP*QPGQPA
Trigger: GGCTGGCTGGCCTGGCTGTCATGGCAGTGGGCATCT...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRGSDAP*RWRSSP
Trigger: TGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACC...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGCCACCGGCCTCCTGTaGGCGGATCCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRATGLL*ADPLTV
Trigger: GACAGTGAGTGGATCCGCTCACAGGAGGCCGGTGGC...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCGTCCAGATGCCCACTaGCATGACAGCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWERPDAH*HDSQAS
Trigger: GCTGGCCTGGCTGTCATGGCAGTGGGCATCTGGACG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCCCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR GCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGACTTGCAGCAGCTGTCTaGGACCACACGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRLAAAV*DHTATG
Trigger: GCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAG...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGTGGGATGGGGCCATGTaGCTGCAAGGCAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWWDGAM*LQGKAP
Trigger: TGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCA...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCACCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGAPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCCCCACAGCCCCAATaGCCCTCAGGTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHSPQPQ*PSGAPG
Trigger: TCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGA...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCATTTCGGGTGGTGGTaGCTGCGGTGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEHFGWW*LRWGRQ
Trigger: CTGTCTTCCCCACCGCAGTCACCACCACCCGAAATG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCAGCAGTGGAACTCCTaGTGCAGCTGGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEQQWNS*CSWSTA
Trigger: CGCTGTGGACCAGCTGCAGCAGGAGTTCCACTGCTG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCTTGCAGCAGCTGTCTaGGACCACACGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLALAAAV*DHTATG
Trigger: GCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAG...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGAGATGCCCACTGCCATaGCAGCCAGGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSELTWLPQLGWGHVAARRCPLP*QPGQPA
Trigger: GGCTGGCTGGCCTGGCTGTCATGGCAGTGGGCATCT...CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCAGACCCCAGTCACCATaGCGACAGTGCCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPRPQSP*RQCPPP
Trigger: TGGTGGCGGGCACTGTCGTCATGGTGACTGGGGTCT...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKAGSDAP*RWRSSP
Trigger: TGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACC...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGGTCTCGCCAGTCCTGTaGGTTGTTGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRVSPVL*VVAATA
Trigger: TGCTGTGGCAGCAACAACTCACAGGACTGGCGAGAC...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGTCTCGCCAGTCCTGTaGGTTGTTGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGAVSPVL*VVAATA
Trigger: TGCTGTGGCAGCAACAACTCACAGGACTGGCGAGAC...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGGCCACCGGCCTCCTGTaGGCGGATCCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARATGLL*ADPLTV
Trigger: GACAGTGAGTGGATCCGCTCACAGGAGGCCGGTGGC...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCGCCACCGGCCTCCTGTaGGCGGATCCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGATGLL*ADPLTV
Trigger: GACAGTGAGTGGATCCGCTCACAGGAGGCCGGTGGC...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCATTTCGGGTGGTGGTaGCTGCGGTGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHHFGWW*LRWGRQ
Trigger: CTGTCTTCCCCACCGCAGTCACCACCACCCGAAATG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTCAGGGCAGTGCACAGTaGCCACGTGGCATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPQGSAQ*PRGISG
Trigger: ACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTG...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTGAGGCATGGTCTCGCTaGCCACAAAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPEAWSR*PQRATT
Trigger: GGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTC...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGACCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRPLQDR*TEAPQD
Trigger: GTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGG...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHPLQDR*TEAPQD
Trigger: GTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCCAGGATGTAGGCTGTaGCCAGGTAGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHPGCRL*PGRCLR
Trigger: CCTCAGGCACCTACCTGGCCACAGCCTACATCCTGG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCGCTGGTCCACAGCGCTaGTCACAGCCTCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKAAGPQR*SQPHGP
Trigger: CGGGCCATGAGGCTGTGACCAGCGCTGTGGACCAGC...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCGCTGGTCCACAGCGCTaGTCACAGCCTCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGAGPQR*SQPHGP
Trigger: CGGGCCATGAGGCTGTGACCAGCGCTGTGGACCAGC...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGAACTCCTGCTGCAGCTaGTCCACAGCGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRNSCCS*STALVT
Trigger: TGTGACCAGCGCTGTGGACCAGCTGCAGCAGGAGTT...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCTTGCAGCAGCTGTCTaGGACCACACGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKALAAAV*DHTATG
Trigger: GCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAG...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 4 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCAGACCCCAGTCACCATaGCGACAGTGCCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPRPQSP*RQCPPP
Trigger: TGGTGGCGGGCACTGTCGTCATGGTGACTGGGGTCT...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGAGGTCTCCAACTTGGTaGTGCAGCCGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLARSPTW*CSRPPP
Trigger: AGGTGGAGGGCGGCTGCATCACCAAGTTGGAGACCT...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR TCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCTCCCCACAGCCCCAATaGCCCTCAGGTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGSPQPQ*PSGAPG
Trigger: TCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGA...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCTCCCCACAGCCCCAATaGCCCTCAGGTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKASPQPQ*PSGAPG
Trigger: TCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGA...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGTCCCCACAGCCCCAATaGCCCTCAGGTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARSPQPQ*PSGAPG
Trigger: TCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGA...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLAPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCATTTCGGGTGGTGGTaGCTGCGGTGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPHFGWW*LRWGRQ
Trigger: CTGTCTTCCCCACCGCAGTCACCACCACCCGAAATG...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCCAGGGCAGTGCACAGTaGCCACGTGGCATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSQGSAQ*PRGISG
Trigger: ACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTG...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCAGGGCAGTGCACAGTaGCCACGTGGCATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPQGSAQ*PRGISG
Trigger: ACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTG...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCCAGTGGAACTCCTGCTaGAGCTGGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSQWNSC*SWSTAL
Trigger: CAGCGCTGTGGACCAGCTGCAGCAGGAGTTCCACTG...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCAGCAGTGGAACTCCTaGTGCAGCTGGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLAQQWNS*CSWSTA
Trigger: CGCTGTGGACCAGCTGCAGCAGGAGTTCCACTGCTG...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCCAGCAGTGGAACTCCTaGTGCAGCTGGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLQQWNS*CSWSTA
Trigger: CGCTGTGGACCAGCTGCAGCAGGAGTTCCACTGCTG...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAACCCCCTCACCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQPPHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGGGG...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR GCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCAGGCCCCTTCCAACCTaGATCTCCCCTGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPRPLPT*ISPAGH
Trigger: ATGCCCAGCAGGGGAGATGCAGGTTGGAAGGGGCCT...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR CCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGCTGGTGGTAGCGCTTaGTCATGGTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEAGGSA*SWCPSG
Trigger: ACCTGAAGGACACCATGACCAAGCGCTACCACCAGC...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCCACCTTGTAGATGTTaGAGGCATGGTCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEPPCRC*RHGLAA
Trigger: GGCAGCGAGACCATGCCTCCAACATCTACAAGGTGG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCATCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGASQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGAAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLAGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGTGGGATGGGGCCATGTaGCTGCAAGGCAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARWDGAM*LQGKAP
Trigger: TGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCA...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCTGGGATGGGGCCATGTaGCTGCAAGGCAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGWDGAM*LQGKAP
Trigger: TGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCA...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPLPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPLPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCGGGTCAGAGCTCACCTaGCTTCCCCAACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPGSELT*LPQLGW
Trigger: CCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCGGGTCAGAGCTCACCTaGCTTCCCCAACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSGSELT*LPQLGW
Trigger: CCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCAGATGCCCACTGCCATaGCAGCCAGGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RHLGTAVNKTRKALPRRGRCPLP*QPGQPA
Trigger: GGCTGGCTGGCCTGGCTGTCATGGCAGTGGGCATCT...GCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVGSDAP*RWRSSP
Trigger: TGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACC...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCGTCTCGCCAGTCCTGTaGGTTGTTGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLVSPVL*VVAATA
Trigger: TGCTGTGGCAGCAACAACTCACAGGACTGGCGAGAC...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCAGGTCTCCAACTTGGTaGTGCAGCCGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGRSPTW*CSRPPP
Trigger: AGGTGGAGGGCGGCTGCATCACCAAGTTGGAGACCT...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR TCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAAGTAGTGCTCCAGCTTaGGACTCCTGTACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRSSAPA*DSCTGS
Trigger: GCTGCCTGTACAGGAGTCTCAAGCTGGAGCACTACT...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSELTWLPQLGWGHVAARPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCCATTTCGGGTGGTGGTaGCTGCGGTGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPHFGWW*LRWGRQ
Trigger: CTGTCTTCCCCACCGCAGTCACCACCACCCGAAATG...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGCAGGGCAGTGCACAGTaGCCACGTGGCATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWQGSAQ*PRGISG
Trigger: ACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTG...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCAGGGCAGTGCACAGTaGCCACGTGGCATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGQGSAQ*PRGISG
Trigger: ACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTG...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCATGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: GKTAGALSRETRAGLGGAWKRLL*RTGGQK
Trigger: CTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCA...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCAGTGGAACTCCTGCTaGAGCTGGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGQWNSC*SWSTAL
Trigger: CAGCGCTGTGGACCAGCTGCAGCAGGAGTTCCACTG...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAAGAGGCATGGTCTCGCTaGCCACAAAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEEAWSR*PQRATT
Trigger: GGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTC...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGGAGGCATGGTCTCGCTaGCCACAAAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWEAWSR*PQRATT
Trigger: GGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTC...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAGGGAACGCTCGGCCTTaGGCCACTCAGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQGNARP*ATQQGP
Trigger: GGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCC...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKAKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAAAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGPLQDR*TEAPQD
Trigger: GTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGG...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARPLQDR*TEAPQD
Trigger: GTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGG...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAACTGGGGCAGCCGGGCTaGAAACGACTCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQLGQPG*KRLLCR
Trigger: CCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAG...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGCCAGGATGTAGGCTGTaGCCAGGTAGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWPGCRL*PGRCLR
Trigger: CCTCAGGCACCTACCTGGCCACAGCCTACATCCTGG...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTGCTGGTGGTAGCGCTTaGTCATGGTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPAGGSA*SWCPSG
Trigger: ACCTGAAGGACACCATGACCAAGCGCTACCACCAGC...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGGCTGGTCCACAGCGCTaGTCACAGCCTCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRAGPQR*SQPHGP
Trigger: CGGGCCATGAGGCTGTGACCAGCGCTGTGGACCAGC...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGCTTGCAGCAGCTGTCTaGGACCACACGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVLAAAV*DHTATG
Trigger: GCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAG...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGATCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: AWGVKGFSPCWERSALRHAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLSPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTTGGGATGGGGCCATGTaGCTGCAAGGCAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPWDGAM*LQGKAP
Trigger: TGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCA...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAACTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCELPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGCTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWLPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGGGGTCAGAGCTCACCTaGCTTCCCCAACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARGSELT*LPQLGW
Trigger: CCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCAGGTAGGTGCCTaGGGCCAGCAGGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQGQVGA*GQQADV
Trigger: TACATCAGCCTGCTGGCCTCAGGCACCTACCTGGCC...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAAGACCCCAGTCACCATaGCGACAGTGCCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQRPQSP*RQCPPP
Trigger: TGGTGGCGGGCACTGTCGTCATGGTGACTGGGGTCT...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGAGACCCCAGTCACCATaGCGACAGTGCCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRRPQSP*RQCPPP
Trigger: TGGTGGCGGGCACTGTCGTCATGGTGACTGGGGTCT...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGGTCTCGCCAGTCCTGTaGGTTGTTGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARVSPVL*VVAATA
Trigger: TGCTGTGGCAGCAACAACTCACAGGACTGGCGAGAC...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCGTCTCGCCAGTCCTGTaGGTTGTTGCTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PTGMGPCGCKARPQFLKGVSPVL*VVAATA
Trigger: TGCTGTGGCAGCAACAACTCACAGGACTGGCGAGAC...GCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGTAGTGCTCCAGCTTaGGACTCCTGTACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLSSAPA*DSCTGS
Trigger: GCTGCCTGTACAGGAGTCTCAAGCTGGAGCACTACT...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCACCCCCAGAGGTTATGGTaGTGGCACAGGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PFQPASDHQAESVSGEPHPQRLW*WHRVGV
Trigger: GACACCCACCCTGTGCCATCACCATAACCTCTGGGG...GTGGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGAAGGGCCTGGGGTGTaGAGGGTTTCTCCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQEGPGV*RVSPPA
Trigger: AGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTC...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCCAGTGGAACTCCTGCTaGAGCTGGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PSPPLLGIGAQQKALEAAQWNSC*SWSTAL
Trigger: CAGCGCTGTGGACCAGCTGCAGCAGGAGTTCCACTG...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR GCA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTCAGCAGTGGAACTCCTaGTGCAGCTGGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPQQWNS*CSWSTA
Trigger: CGCTGTGGACCAGCTGCAGCAGGAGTTCCACTGCTG...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAGTGGAACTCCTaGTGCAGCTGGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQQQWNS*CSWSTA
Trigger: CGCTGTGGACCAGCTGCAGCAGGAGTTCCACTGCTG...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGGAGGCATGGTCTCGCTaGCCACAAAGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQEAWSR*PQRATT
Trigger: GGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTC...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPPMTLR*SWMKVS
Trigger: GGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGG...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCCAGGATGTAGGCTGTaGCCAGGTAGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQPGCRL*PGRCLR
Trigger: CCTCAGGCACCTACCTGGCCACAGCCTACATCCTGG...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGAACTCCTGCTGCAGCTaGTCCACAGCGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWNSCCS*STALVT
Trigger: TGTGACCAGCGCTGTGGACCAGCTGCAGCAGGAGTT...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCAACTCCTGCTGCAGCTaGTCCACAGCGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPNSCCS*STALVT
Trigger: TGTGACCAGCGCTGTGGACCAGCTGCAGCAGGAGTT...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCTTGCTGCCACAGCAGTaGAACTCCTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPLLPQQ*NSCCSW
Trigger: CCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAA...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGSPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCTCCCCTGCTGGGCATTaGTGCGCAGCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKASPAGH*CAAKGT
Trigger: AGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGA...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp AGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCCCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RHLGTAVNKTRKALPRRGPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...GCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGPSGSP*APCSAA
Trigger: AGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGG...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGAGGTCTCCAACTTGGTaGTGCAGCCGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVRSPTW*CSRPPP
Trigger: AGGTGGAGGGCGGCTGCATCACCAAGTTGGAGACCT...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAATCCCCACAGCCCCAATaGCCCTCAGGTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQSPQPQ*PSGAPG
Trigger: TCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGA...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAAAGTAGTGCTCCAGCTTaGGACTCCTGTACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCESSAPA*DSCTGS
Trigger: GCTGCCTGTACAGGAGTCTCAAGCTGGAGCACTACT...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGAGTAGTGCTCCAGCTTaGGACTCCTGTACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWSSAPA*DSCTGS
Trigger: GCTGCCTGTACAGGAGTCTCAAGCTGGAGCACTACT...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGCATTTCGGGTGGTGGTaGCTGCGGTGGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRHFGWW*LRWGRQ
Trigger: CTGTCTTCCCCACCGCAGTCACCACCACCCGAAATG...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPSPVSC*CHSSGT
Trigger: AGTTCCACTGCTGTGGCAGCAACAACTCACAGGACT...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWPMTLR*SWMKVS
Trigger: GGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGG...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPPMTLR*SWMKVS
Trigger: GGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGG...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR GCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGPMTLR*SWMKVS
Trigger: GGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGG...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTATCATGCCAAAGACCTaGACACAGGCAATGCCGATC +
Preference number: 4 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPIMPKT*TQAMPI
Trigger: GATCGGCATTGCCTGTGTGCAGGTCTTTGGCATGAT...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKASSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAACCAGGATGTAGGCTGTaGCCAGGTAGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQPGCRL*PGRCLR
Trigger: CCTCAGGCACCTACCTGGCCACAGCCTACATCCTGG...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCGGTAGCGCTTGGTCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLGSAWS*CPSGSP
Trigger: AGGAGAACCTGAAGGACACCATGACCAAGCGCTACC...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCGGTAGCGCTTGGTCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPGSAWS*CPSGSP
Trigger: AGGAGAACCTGAAGGACACCATGACCAAGCGCTACC...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCGCTGGTGGTAGCGCTTaGTCATGGTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPAGGSA*SWCPSG
Trigger: ACCTGAAGGACACCATGACCAAGCGCTACCACCAGC...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGCTGGTCCACAGCGCTaGTCACAGCCTCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRAGPQR*SQPHGP
Trigger: CGGGCCATGAGGCTGTGACCAGCGCTGTGGACCAGC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGTTGCTGCCACAGCAGTaGAACTCCTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKLLPQQ*NSCCSW
Trigger: CCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAA...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCACTTGCTGCCACAGCAGTaGAACTCCTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PFQPASDHQAESVSGEPHLLPQQ*NSCCSW
Trigger: CCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAA...GTGGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAACCACCTTGTAGATGTTaGAGGCATGGTCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEPPCRC*RHGLAA
Trigger: GGCAGCGAGACCATGCCTCCAACATCTACAAGGTGG...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CCA 90 bp GGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGGCCCCTGGTACTCAGTaGTCTCAGCTCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GSELTWLPQLGWGHVAARAPGTQ*SQLSSW
Trigger: CCAACTACTGAGCTGAGACCACTGAGTACCAGGGGC...CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGGGTGATGGCACAGGGTaGGTGTCATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRGDGTG*VSSGSP
Trigger: TGGGCTCCCTGATGACACCCACCCTGTGCCATCACC...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACCTGCATCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGGGTTTCTCCCCCTGCTaGGAACGCTCGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: NLHLPCWALVRSKRHLKLGFSPC*ERSALR
Trigger: GCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACC...CAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR CCA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACACCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCCGCCCTTGTAGATGTTaGAGGCATGGTCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSPPLLGIGAQQKALEAARPCRC*RHGLAA
Trigger: GGCAGCGAGACCATGCCTCCAACATCTACAAGGGCG...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528011.2
CDS-3UTR TCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCTGTACAGGCAGCACGTaGAGATCATGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPCTGST*RSCQRP
Trigger: AGGTCTTTGGCATGATCTTCACGTGCTGCCTGTACA...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCTGTACAGGCAGCACGTaGAGATCATGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLCTGST*RSCQRP
Trigger: AGGTCTTTGGCATGATCTTCACGTGCTGCCTGTACA...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCAGTAGTGCTCCAGCTTaGGACTCCTGTACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSPPLLGIGAQQKALEAASSAPA*DSCTGS
Trigger: GCTGCCTGTACAGGAGTCTCAAGCTGGAGCACTACT...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGTCTACAAGTGTTTATTaGGCACCTGTATGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWSTSVY*APVCGR
Trigger: CCTGCCACATACAGGTGCTCAATAAACACTTGTAGA...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR GCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARWKRLL*RTGGQK
Trigger: CTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCA...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAATGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEWKRLL*RTGGQK
Trigger: CTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCA...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAACAGTGGAACTCCTGCTaGAGCTGGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQQWNSC*SWSTAL
Trigger: CAGCGCTGTGGACCAGCTGCAGCAGGAGTTCCACTG...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAACCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCEPVSCC*HSSGTP
Trigger: AGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGG...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGPVSCC*HSSGTP
Trigger: AGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGG...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: ELTWLPQLGWGHVAARQGPVSCC*HSSGTP
Trigger: AGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGG...GCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: AHLASPTGMGPCGCKARPSPVSC*CHSSGT
Trigger: AGTTCCACTGCTGTGGCAGCAACAACTCACAGGACT...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLASPVSC*CHSSGT
Trigger: AGTTCCACTGCTGTGGCAGCAACAACTCACAGGACT...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCATCATGCCAAAGACCTaGACACAGGCAATGCCGATC +
Preference number: 4 (lower is better)
Translates to: KGFSPCWERSALRHSARPIMPKT*TQAMPI
Trigger: GATCGGCATTGCCTGTGTGCAGGTCTTTGGCATGAT...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACAAACCTGCATCTCCCCTaGTGGGCATTGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTNLHLP*WALVRS
Trigger: GCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAACCAGGATGTAGGCTGTaGCCAGGTAGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQPGCRL*PGRCLR
Trigger: CCTCAGGCACCTACCTGGCCACAGCCTACATCCTGG...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGGGTAGCGCTTGGTCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKGFSPCWERSALRHSARGSAWS*CPSGSP
Trigger: AGGAGAACCTGAAGGACACCATGACCAAGCGCTACC...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAAACTCCTGCTGCAGCTaGTCCACAGCGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQNSCCS*STALVT
Trigger: TGTGACCAGCGCTGTGGACCAGCTGCAGCAGGAGTT...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCTTGCTGCCACAGCAGTaGAACTCCTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RHLGTAVNKTRKALPRRGLLPQQ*NSCCSW
Trigger: CCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAA...GCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAACTTCCCCAACTGGGATaGGGCCATGTGGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQLPQLG*GHVAAR
Trigger: CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAG...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACCTGGCTTCCCCAACTaGGATGGGGCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRPGFPN*DGAMWL
Trigger: CAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAACTGCATCTCCCCTGCTaGGCATTGGTGCGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQLHLPC*ALVRSK
Trigger: TTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAG...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR TCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRPSGSP*APCSAA
Trigger: AGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGG...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVPSGSP*APCSAA
Trigger: AGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGG...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCTGTACAGGCAGCACGTaGAGATCATGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPCTGST*RSCQRP
Trigger: AGGTCTTTGGCATGATCTTCACGTGCTGCCTGTACA...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR TCA 90 bp AGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCAGGTCTCCAACTTGGTaGTGCAGCCGCCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RHLGTAVNKTRKALPRRGRSPTW*CSRPCR
Trigger: TCTACAAGGGCGGCTGCATCACCAAGTTGGAGACCT...GCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528011.2
CDS-3UTR GCA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAAAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GPCGCKARPQFLKGLGCESPVSC*CHSSGT
Trigger: AGTTCCACTGCTGTGGCAGCAACAACTCACAGGACT...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGATCATGCCAAAGACCTaGACACAGGCAATGCCGATC +
Preference number: 4 (lower is better)
Translates to: GSELTWLPQLGWGHVAARIMPKT*TQAMPI
Trigger: GATCGGCATTGCCTGTGTGCAGGTCTTTGGCATGAT...CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCATCATGCCAAAGACCTaGACACAGGCAATGCCGATC +
Preference number: 4 (lower is better)
Translates to: SSPGFPNWDGAMWLQGKAIMPKT*TQAMPI
Trigger: GATCGGCATTGCCTGTGTGCAGGTCTTTGGCATGAT...GGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVSSVVG*SSSKAQ
Trigger: TTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCT...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp AACCTGCATCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGAAGGGTTTCTCCCCCTaGTGGGAACGCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NLHLPCWALVRSKRHLKLKGFSP*WERSAL
Trigger: CAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT...CAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR CCA 90 bp TCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGCTGGTGGTAGCGCTTaGTCATGGTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SELTWLPQLGWGHVAARQAGGSA*SWCPSG
Trigger: ACCTGAAGGACACCATGACCAAGCGCTACCACCAGC...TTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACATTGCTGCCACAGCAGTaGAACTCCTGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTLLPQQ*NSCCSW
Trigger: CCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAA...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGTCTCAGCTCAGTAGTTaGGTGCAGCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVSQLSS*VQQQQG
Trigger: GCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGA...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAGGCAGAGAGTGTGTCTaGGGAGCCCCACAAAACACC +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQGRECV*GAPQNT
Trigger: GGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCC...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGGTCAGAGCTCACCTaGCTTCCCCAACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRGSELT*LPQLGW
Trigger: CCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAACCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQPSGSP*APCSAA
Trigger: AGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGG...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRWKRLL*RTGGQK
Trigger: CTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCA...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKSPVSC*CHSSGT
Trigger: AGTTCCACTGCTGTGGCAGCAACAACTCACAGGACT...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGATCATGCCAAAGACCTaGACACAGGCAATGCCGATC +
Preference number: 4 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQIMPKT*TQAMPI
Trigger: GATCGGCATTGCCTGTGTGCAGGTCTTTGGCATGAT...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAGCTGGTCCACAGCGCTaGTCACAGCCTCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKAGPQR*SQPHGP
Trigger: CGGGCCATGAGGCTGTGACCAGCGCTGTGGACCAGC...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR TCA 90 bp TGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGAGACCCCAGTCACCATaGCGACAGTGCCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: CGRDGCRHLGTAVNKTRKRPQSP*RQCPPP
Trigger: TGGTGGCGGGCACTGTCGTCATGGTGACTGGGGTCT...CTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR TCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRPSGSP*APCSAA
Trigger: AGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCTGTACAGGCAGCACGTaGAGATCATGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: RHLGTAVNKTRKALPRRGCTGST*RSCQRP
Trigger: AGGTCTTTGGCATGATCTTCACGTGCTGCCTGTACA...GCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGTGTACAGGCAGCACGTaGAGATCATGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVCTGST*RSCQRP
Trigger: AGGTCTTTGGCATGATCTTCACGTGCTGCCTGTACA...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp GGTGATGGCACAGGGTGGGTGTCATCAGGGAGCCCAGCCCCTGGTACTCAGTGGTCTACAAGTGTTTATTaGGCACCTGTATGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDGTGWVSSGSPAPGTQWSTSVY*APVCGR
Trigger: CCTGCCACATACAGGTGCTCAATAAACACTTGTAGA...CCACTGAGTACCAGGGGCTGGGCTCCCTGATGACACCCACCCTGTGCCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR GCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAACCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQPVSCC*HSSGTP
Trigger: AGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGG...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR GCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRPMTLR*SWMKVS
Trigger: GGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAGGTAGCGCTTGGTCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQGSAWS*CPSGSP
Trigger: AGGAGAACCTGAAGGACACCATGACCAAGCGCTACC...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACAGGTAGCGCTTGGTCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTGSAWS*CPSGSP
Trigger: AGGAGAACCTGAAGGACACCATGACCAAGCGCTACC...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CCA 90 bp AACCTGCATCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCACCTTGTAGATGTTaGAGGCATGGTCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLHLPCWALVRSKRHLKLPPCRC*RHGLAA
Trigger: GGCAGCGAGACCATGCCTCCAACATCTACAAGGTGG...CAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS-3UTR GCA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGACCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRPVSCC*HSSGTP
Trigger: AGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGG...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR TCA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAATCTACAAGTGTTTATTaGGCACCTGTATGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQSTSVY*APVCGR
Trigger: CCTGCCACATACAGGTGCTCAATAAACACTTGTAGA...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CCA 90 bp TGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCTGGTGGTAGCGCTTaGTCATGGTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CGRDGCRHLGTAVNKTRKAGGSA*SWCPSG
Trigger: ACCTGAAGGACACCATGACCAAGCGCTACCACCAGC...CTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CCA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAACCACCTTGTAGATGTTaGAGGCATGGTCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKPPCRC*RHGLAA
Trigger: GGCAGCGAGACCATGCCTCCAACATCTACAAGGTGG...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS CCA 90 bp TGCAGCGACAACCTCCTTGGGCCCATCTGCACCACCCCCACCCCGTaGCCCTGCGCCCTCCTGACCAGGCGCAGCAGGTTCCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: CSDNLLGPICTTPTP*PCALLTRRSRFRRS
Trigger: GGAGCGTCGGAACCTGCTGCGCCTGGTCAGGAGGGCGCAGGGCCACGGGGTGGGGGTGGTGCAGATGGGCCCAAGGAGGTTGTCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525868.5
ENST00000526661.5
ENST00000531999.5
ENST00000532045.6
ENST00000645878.1
CDS-3UTR CAA 90 bp AGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGGTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: RQQGRCRGRRGLGWEGQRWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...CCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS GCA 90 bp AGGCACAGGTTCAAAGCCTGCAGCGACAACCTCCTTGGGCCCATCTaGACCACCCCCACCCCGTGGCCCTGCGCCCTCCTGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RHRFKACSDNLLGPI*TTPTPWPCALLTRR
Trigger: GCGCCTGGTCAGGAGGGCGCAGGGCCACGGGGTGGGGGTGGTGCAGATGGGCCCAAGGAGGTTGTCGCTGCAGGCTTTGAACCTGTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525868.5
ENST00000526661.5
ENST00000531999.5
ENST00000532045.6
ENST00000645878.1
CDS CCA 90 bp CCACGGCATTCCCGGGGCCGCACGTCACAGGCTGGCAGGAGCCTATaGGCCTGCAGTAAGGGCGGAGGAGGCCACTCAGACAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PRHSRGRTSQAGRSL*ACSKGGGGHSDSRG
Trigger: CCCTCTGCTGTCTGAGTGGCCTCCTCCGCCCTTACTGCAGGCCCATAGGCTCCTGCCAGCCTGTGACGTGCGGCCCCGGGAATGCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528867.5
CDS-3UTR CAA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAAGGTTCCGACGCTCCTaGAAGGTGGCGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GKTAGALSRETRAGLGGARFRRS*KVAQQP
Trigger: GGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCT...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS GCA 90 bp CATTCCCGGGGCCGCACGTCACAGGCTGGCAGGAGCCTATGGGCCTaGAGTAAGGGCGGAGGAGGCCACTCAGACAGCAGAGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: HSRGRTSQAGRSLWA*SKGGGGHSDSRGVG
Trigger: CCCTACCCCTCTGCTGTCTGAGTGGCCTCCTCCGCCCTTACTGCAGGCCCATAGGCTCCTGCCAGCCTGTGACGTGCGGCCCCGGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528867.5
CDS GCA 90 bp CAGTGGGCAAGCTGTGAGCATGGGGAAGCCAGGGAGGGCGTGGGGTaGAGACAGCAGCTGAGCGCCCTGGGCCACGTTTCCAGACAGCAC +
Preference number: 5 (lower is better)
Translates to: QWASCEHGEAREGVG*RQQLSALGHVSRQH
Trigger: GTGCTGTCTGGAAACGTGGCCCAGGGCGCTCAGCTGCTGTCTGCACCCCACGCCCTCCCTGGCTTCCCCATGCTCACAGCTTGCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525333.5
ENST00000525718.6
ENST00000527341.5
CDS GCA 90 bp CTCCAGGTGGGGGCTGAGGGGCGGCCACCCTCCCTGAAGCTTTCTTaGGGAGCTGGTGTCTTCCCTCAGCTGGTCCAGCAGGAACGTGGG +
Preference number: 5 (lower is better)
Translates to: LQVGAEGRPPSLKLS*GAGVFPQLVQQERG
Trigger: CCCACGTTCCTGCTGGACCAGCTGAGGGAAGACACCAGCTCCGCAAGAAAGCTTCAGGGAGGGTGGCCGCCCCTCAGCCCCCACCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526661.5
ENST00000532045.6
ENST00000645878.1
CDS CCA 90 bp CATCCTGGGGCAGCCGGGCTGGAAACGACTCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGACTCTAGGCACGCGTCCGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: HPGAAGLETTPLQDR*TEAPQDSRHASESG
Trigger: CCCGGACTCGGACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322008.9
ENST00000645878.1
CDS CCA 90 bp GCCTATGGGCCAGCCGGGCTGGAAACGACTCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGACTCTAGGCACGCGTCCGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: AYGPAGLETTPLQDR*TEAPQDSRHASESG
Trigger: CCCGGACTCGGACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGCCCATAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526693.5
CDS-3UTR CAA 90 bp CTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGGTTCCGACGCTCCTaGAAGGTGGCGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LGCEGFLPLLGTLGLAPLRFRRS*KVAQQP
Trigger: GGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCT...GAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCACGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GKTAGALSRETRAGLGGARQSCE*LLPQQW
Trigger: CCACTGCTGTGGCAGCAACAACTCACAGGACTGGCG...TGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS GCA 90 bp CCCACCCTGGCCAGCACTCACCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCACGCGT +
Preference number: 5 (lower is better)
Translates to: PTLASTHQPGWKRLL*RTGGQKLPRTLGTR
Trigger: ACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGTGAGTGCTGGCCAGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525718.6
CDS GCA 90 bp GGCTGGCAGGAGCCTATGGGCCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCACGCGT +
Preference number: 5 (lower is better)
Translates to: GWQEPMGQPGWKRLL*RTGGQKLPRTLGTR
Trigger: ACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGCCCATAGGCTCCTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526693.5
CDS CCA 90 bp CAGCACTCACCAGCCGGGCTGGAAACGACTCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGACTCTAGGCACGCGTCCGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: QHSPAGLETTPLQDR*TEAPQDSRHASESG
Trigger: CCCGGACTCGGACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGTGAGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525718.6
CDS-3UTR CAA 90 bp GGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTGGGGTGTGAAAGGTTCCGACGCTCCTaGAAGGTGGCGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GPCGCKARPQFLKGLGCERFRRS*KVAQQP
Trigger: GGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCT...TTCACACCCCAGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGATGAAGGTCTCCAACTaGGTGATGCAGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEMKVSN*VMQPPS
Trigger: GGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCAT...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 5 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWEKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KGFSPCWERSALRHSARPLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS GCA 90 bp TGTTGGAGGCATGGTCTCGCTGCCCACAAAGAGCCACCACCGTCTTaGAGCAGCTGTCTGGGACCACACGGCCACCGGCCTCCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: CWRHGLAAHKEPPPS*SSCLGPHGHRPPVS
Trigger: GCTCACAGGAGGCCGGTGGCCGTGTGGTCCCAGACAGCTGCTGCAAGACGGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000528011.2
ENST00000529810.5
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS GCA 90 bp CCCACCCTGGCCAGCACTCACCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCTACCAC +
Preference number: 5 (lower is better)
Translates to: PTLASTHQPGWKRLL*RTGGQKLPRTLGYH
Trigger: GTGGTAGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGTGAGTGCTGGCCAGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525333.5
ENST00000527341.5
CDS CCA 90 bp CATCCTGGGGCAGCCGGGCTGGAAACGACTCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGACTCTAGGCTACCACGCGTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: HPGAAGLETTPLQDR*TEAPQDSRLPRVRV
Trigger: GACTCGGACGCGTGGTAGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397420.9
ENST00000531999.5
ENST00000532045.6
ENST00000642413.1
CDS-3UTR CAA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCAGGTTCCGACGCTCCTaGAAGGTGGCGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PSPPLLGIGAQQKALEAARFRRS*KVAQQP
Trigger: GGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCT...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CAA 90 bp GGTGACTGCGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDCGGEDSRGAVEGDEGWRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...CCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCGCAGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCCCCTTCCAACCTGCATCTGACCACCAGGCAGAGAGTGTGTCTGGGGAGCCCCCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: APSNLHLTTRQRVCLGSPLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...GGGGCTCCCCAGACACACTCTCTGCCTGGTGGTCAGATGCAGGTTGGAAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CAA 90 bp CCTGCATCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PASPLLGIGAQQKALEAAWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGATGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530726.5
CDS CCA 90 bp CATGTGTGTGTGTCCGCCCCGCCTGTGCATGTCTGTGTCTCTGAATaGCCTGCCCAGGCCCCTCACCTGCTGGTAGTAGGCGTAGGCGAG +
Preference number: 5 (lower is better)
Translates to: HVCVSAPPVHVCVSE*PAQAPHLLVVGVGE
Trigger: CTCGCCTACGCCTACTACCAGCAGGTGAGGGGCCTGGGCAGGCCATTCAGAGACACAGACATGCACAGGCGGGGCGGACACACACACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526661.5
ENST00000532075.1
CDS CCA 90 bp CAGCACTCACCAGCCGGGCTGGAAACGACTCCTCTGCAGGACAGGTaGACAGAAGCTCCCCAGGACTCTAGGCTACCACGCGTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: QHSPAGLETTPLQDR*TEAPQDSRLPRVRV
Trigger: GACTCGGACGCGTGGTAGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGGTGAGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525333.5
ENST00000527341.5
CDS-3UTR CAA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGATCCTTCAGGTTCTCCTaGAGCTCCGTGTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRSFRFS*SSVFSC
Trigger: GCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGA...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCCTTCAGGTTCTCCTaGAGCTCCGTGTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AWGVKGFSPCWERSALRHSFRFS*SSVFSC
Trigger: GCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGA...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGACAGTCCTGTGAGTTGTaGCTGCCACAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRQSCEL*LPQQWN
Trigger: GTTCCACTGCTGTGGCAGCAACAACTCACAGGACTG...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCTCAGTCCTGTGAGTTGTaGCTGCCACAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GFLPLLGTLGLAPLSKAPQSCEL*LPQQWN
Trigger: GTTCCACTGCTGTGGCAGCAACAACTCACAGGACTG...AGGGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GGGTCAGAGCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GSELTWLPQLGWGHVAARRQSCE*LLPQQW
Trigger: CCACTGCTGTGGCAGCAACAACTCACAGGACTGGCG...CCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGCTCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCATGAAGGTCTCCAACTaGGTGATGCAGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KGFSPCWERSALRHSARPMKVSN*VMQPPS
Trigger: GGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCAT...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS GCA 90 bp TTGAACTCACCCATCCTGGGGCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCACGCGT +
Preference number: 5 (lower is better)
Translates to: LNSPILGQPGWKRLL*RTGGQKLPRTLGTR
Trigger: ACGCGTGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATGGGTGAGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322008.9
ENST00000530726.5
ENST00000645878.1
CDS GCA 90 bp GGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTaGAGCAGCAGCAAGGCCCAAGGCAGGGTCAGTAGTGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GAQPLVLSGLSSVVG*SSSKAQGRVSSAPA
Trigger: AGCTGGAGCACTACTGACCCTGCCTTGGGCCTTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
ENST00000532045.6
ENST00000645878.1
CDS GCA 90 bp TTGAACTCACCCATCCTGGGGCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LNSPILGQPGWKRLL*RTGGQKLPRTLGFP
Trigger: GGGGAAGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATGGGTGAGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524748.6
CDS-3UTR CAA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGAGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRVVFFS*NSPILG
Trigger: CCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAAC...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCCAGTCCTGTGAGTTGTaGCTGCCACAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSQSCEL*LPQQWN
Trigger: GTTCCACTGCTGTGGCAGCAACAACTCACAGGACTG...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTCCTGTGAGTTGTaGCTGCCACAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: AHLASPTGMGPCGCKARPQSCEL*LPQQWN
Trigger: GTTCCACTGCTGTGGCAGCAACAACTCACAGGACTG...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCAGTTCCTGAAGGGCCTCGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: NWDGAMWLQGKAPVPEGPRQSCE*LLPQQW
Trigger: CCACTGCTGTGGCAGCAACAACTCACAGGACTGGCG...AGGCCCTTCAGGAACTGGGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 5 (lower is better)
Translates to: VKGFSPCWERSALRHSARKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...CCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KGLGCEGFLPLLGTLGLARSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...CGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCTCACCTGGCTTCCCCAACTGGGATGGGGCCATGTGGCTGCAAGGCAAGGCCCCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: AHLASPTGMGPCGCKARPRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...GGGCCTTGCCTTGCAGCCACATGGCCCCATCCCAGTTGGGGAAGCCAGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGGCCCCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KGFSPCWERSALRHSARPRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGCTCCCCTGCTGGGCATaGGTGCGCAGCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVLPCWA*VRSKRH
Trigger: GTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGATGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS GCA 90 bp TGCACACAGGCAATGCCGATCCCCACAGCCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCCAACTTGGTGATGCAGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: CTQAMPIPTAPMTLR*SWMKVSNLVMQPPS
Trigger: GGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGATCGGCATTGCCTGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
ENST00000532045.6
ENST00000645878.1
CDS GCA 90 bp TTGAACTCACCCATCCTGGGGCAGCCGGGCTGGAAACGACTCCTCTaGAGGACAGGTGGACAGAAGCTCCCCAGGACTCTAGGCTACCAC +
Preference number: 5 (lower is better)
Translates to: LNSPILGQPGWKRLL*RTGGQKLPRTLGYH
Trigger: GTGGTAGCCTAGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATGGGTGAGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397420.9
ENST00000531999.5
ENST00000532045.6
ENST00000642413.1
CDS CCA 90 bp CAGGCAATGCCGATCCCCACAGCCCCAATGACCCTCAGGTGCTCCTaGATGAAGGTCTCCAACTTGGTGATGCAGCCGCCCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QAMPIPTAPMTLRCS*MKVSNLVMQPPSTL
Trigger: CAAGGTGGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGATCGGCATTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
ENST00000532045.6
ENST00000645878.1
CDS-3UTR CAA 90 bp GGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GCEGFLPLLGTLGLAPLSVVFFS*NSPILG
Trigger: CCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAAC...GCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp TTCCTGAAGGGCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCTCCTTCAGGTTCTCCTaGAGCTCCGTGTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FLKGLGCEGFLPLLGTLGSFRFS*SSVFSC
Trigger: GCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGA...GCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGCCCTTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGCGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRRQSCE*LLPQQW
Trigger: CCACTGCTGTGGCAGCAACAACTCACAGGACTGGCG...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 5 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS TCA 90 bp CCGGCTGGTGGTAGCGCTTGGTCATGGTGTCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGGGGTTGGGGTGCAGGAAACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PAGGSAWSWCPSGSP*APCSAGVGVQETSA
Trigger: GGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATGACCAAGCGCTACCACCAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS GCA 90 bp TGCACACAGGCAATGCCGATCCCCACAGCCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCCAACTTGGTGATGCAGCCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: CTQAMPIPTAPMTLR*SWMKVSNLVMQPPL
Trigger: CAAGGGCGGCTGCATCACCAAGTTGGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGATCGGCATTGCCTGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528011.2
CDS-3UTR CAA 90 bp TGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACTCAGCAAGTCCTTCAGGTTCTCCTaGAGCTCCGTGTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CEGFLPLLGTLGLAPLSKSFRFS*SSVFSC
Trigger: GCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGA...CTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGGCACACGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HLGTAVNKTRKALPRRGTRQSCE*LLPQQW
Trigger: CCACTGCTGTGGCAGCAACAACTCACAGGACTGGCG...TGTGCCTCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGATGAAGGTCTCCAACTaGGTGATGCAGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRMKVSN*VMQPPS
Trigger: GGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCAT...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 5 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CGGTGGGGAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGCTCTACAAGTGTTTATaGAGCACCTGTATGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RWGRQQGRCRGRRGLGWELYKCL*STCMWQ
Trigger: CTGCCACATACAGGTGCTCAATAAACACTTGTAGAG...CTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCATGAAGGTCTCCAACTaGGTGATGCAGCCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PSPPLLGIGAQQKALEAAMKVSN*VMQPPL
Trigger: CAAGGGCGGCTGCATCACCAAGTTGGAGACCTTCAT...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528011.2
CDS-3UTR CAA 90 bp GGGAGCCCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GSPAPGTQWSQLSSWVQQVVFFS*NSPILG
Trigger: CCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAAC...CTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCTCTGAGGCAGTCCTGTGAGTTGTaGCTGCCACAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LPCWALVRSKRHLKLPLRQSCEL*LPQQWN
Trigger: GTTCCACTGCTGTGGCAGCAACAACTCACAGGACTG...CCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAATGAAGGTCTCCAACTaGGTGATGCAGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQMKVSN*VMQPPS
Trigger: GGAGGGCGGCTGCATCACCAAGTTGGAGACCTTCAT...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp CCAGCCCCTGGTACTCAGTGGTCTCAGCTCAGTAGTTGGGTGCAGCAGCAGCAAAAGCTGCCTCTGAGGTaGGGGTCCCCAGAGGTTATG +
Preference number: 5 (lower is better)
Translates to: PAPGTQWSQLSSWVQQQQKLPLR*GSPEVM
Trigger: CATAACCTCTGGGGACCCCAACCTCAGAGGCAGCTT...TTGCTGCTGCTGCACCCAACTACTGAGCTGAGACCACTGAGTACCAGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp AACAGGGCAGTGCACAGTGACCACGTGGCATTTCGGGTGGTGGTGACTGCGGTGCGCAGCAAAAGGCACTaGAAGCTGCCTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: NRAVHSDHVAFRVVVTAVRSKRH*KLPLRL
Trigger: CAACCTCAGAGGCAGCTTCAAGTGCCTTTTGCTGCG...CACCGCAGTCACCACCACCCGAAATGCCACGTGGTCACTGTGCACTGCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS-3UTR CAA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAATGGGAACGCTCGGCCTaGCGCCACTCAGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKWERSA*RHSARP
Trigger: GGGCCTTGCTGAGTGGCGCAAGGCCGAGCGTTCCCA...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp GAAGACAGCAGGGGCGCTGTCGAGGGAGACGAGGGCTGGGTTGGGAGGGGCAGACTCTACAAGTGTTTATaGAGCACCTGTATGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EDSRGAVEGDEGWVGRGRLYKCL*STCMWQ
Trigger: CTGCCACATACAGGTGCTCAATAAACACTTGTAGAG...TCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACAGCGCCCCTGCTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp GCCTGGGGTGTGAAGGGTTTCTCCCCCTGCTGGGAACGCTCGGCCTTGCGCCACCTCTACAAGTGTTTATaGAGCACCTGTATGTGGCAG +
Preference number: 5 (lower is better)
Translates to: AWGVKGFSPCWERSALRHLYKCL*STCMWQ
Trigger: CTGCCACATACAGGTGCTCAATAAACACTTGTAGAG...GTGGCGCAAGGCCGAGCGTTCCCAGCAGGGGGAGAAACCCTTCACACCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp CCCTCACCTCCCCTGCTGGGCATTGGTGCGCAGCAAAAGGCACTTGAAGCTGCCGTAAACAGCAGGTACTaGAGGCAAACGGTGCCACAT +
Preference number: 5 (lower is better)
Translates to: PSPPLLGIGAQQKALEAAVNSRY*RQTVPH
Trigger: ATGTGGCACCGTTTGCCTCAAGTACCTGCTGTTTAC...GGCAGCTTCAAGTGCCTTTTGCTGCGCACCAATGCCCAGCAGGGGAGGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
CDS-3UTR CAA 90 bp GCACCTGTATGTGGCAGGGATGGTTGTAGGCATCTGGGTACAGCAGTGAACAAAAGGTTCCGACGCTCCTaGAAGGTGGCGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: APVCGRDGCRHLGTAVNKRFRRS*KVAQQP
Trigger: GGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCT...TTTGTTCACTGCTGTACCCAGATGCCTACAACCATCCCTGCCACATACAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000530726.5
CDS-3UTR CAA 90 bp TGTAGGCATCTGGGTACAGCAGTGAACAAAACCAGGAAGGCCCTGCCCCGCAGAGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: CRHLGTAVNKTRKALPRRVVFFS*NSPILG
Trigger: CCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAAC...TCTGCGGGGCAGGGCCTTCCTGGTTTTGTTCACTGCTGTACCCAGATGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
CDS CCA 90 bp ATGGTGTCCTTCAGGTTCTCCTTGAGCTCCGTGTTCAGCTGGGGTTaGGGTGCAGGAAACTTCAGCCTCAGTCTAAGACCTTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: MVSFRFSLSSVFSWG*GAGNFSLSLRPSKV
Trigger: CACCTTGGAAGGTCTTAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS CCA 90 bp TTGGTCATGGTGTCCTTCAGGTTCTCCTTGAGCTCCGTGTTCAGCTaGGGTTGGGGTGCAGGAAACTTCAGCCTCAGTCTAAGACCTTCC +
Preference number: 5 (lower is better)
Translates to: LVMVSFRFSLSSVFS*GWGAGNFSLSLRPS
Trigger: GGAAGGTCTTAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS TCA 72 bp GCGGCCGGGGGAGGAAGCCCTAGCGGGTACCTCCGGTaGGCTCATGCCAGCCTGCCCGCTCCCCACGGCATT +
Preference number: 6 (lower is better)
Translates to: AAGGGSPSGYLR*AHASLPAPHGI
Trigger: AATGCCGTGGGGAGCGGGCAGGCTGGCATGAGCTCACCGGAGGTACCCGCTAGGGCTTCCTCCCCCGGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526693.5
ENST00000528867.5
CDS CCA 72 bp TCCCGGGGCCGCACGTCACAGGCTGGCAGGAGCCTATaGGCCTGCAGTAAGGGCGGAGGAGGCCACTCAGAC +
Preference number: 6 (lower is better)
Translates to: SRGRTSQAGRSL*ACSKGGGGHSD
Trigger: GTCTGAGTGGCCTCCTCCGCCCTTACTGCAGGCCCATAGGCTCCTGCCAGCCTGTGACGTGCGGCCCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528867.5
CDS TCA 72 bp GGCTCCAGGTGGGGGCTGAGGGGCGGCCACCCTCCCTaGAGCTTTCTTGCGGAGCTGGTGTCTTCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: GSRWGLRGGHPP*SFLAELVSSLS
Trigger: GCTGAGGGAAGACACCAGCTCCGCAAGAAAGCTTCAGGGAGGGTGGCCGCCCCTCAGCCCCCACCTGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526661.5
ENST00000532045.6
ENST00000645878.1
CDS GCA 72 bp GGCCGCACGTCACAGGCTGGCAGGAGCCTATGGGCCTaGAGTAAGGGCGGAGGAGGCCACTCAGACAGCAGA +
Preference number: 6 (lower is better)
Translates to: GRTSQAGRSLWA*SKGGGGHSDSR
Trigger: TCTGCTGTCTGAGTGGCCTCCTCCGCCCTTACTGCAGGCCCATAGGCTCCTGCCAGCCTGTGACGTGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528867.5
CDS TCA 72 bp CCGTGTTCAGCAGGCGCAGCAGGTTCCGACGCTCCTTaGAGGTGGCGCAGCAGCCCAAGACCCCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: PCSAGAAGSDAP*RWRSSPRPQSP
Trigger: TGGTGACTGGGGTCTTGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCTGCTGCGCCTGCTGAACACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529810.5
CDS CCA 72 bp AAGGCACAGGTTCAAAGCCTGCAGCGACAACCTCCTTaGGCCCATCTGCACCACCCCCACCCCGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: KAQVQSLQRQPP*AHLHHPHPVAL
Trigger: CAGGGCCACGGGGTGGGGGTGGTGCAGATGGGCCCAAGGAGGTTGTCGCTGCAGGCTTTGAACCTGTGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526661.5
ENST00000531999.5
ENST00000532045.6
ENST00000645878.1
CDS CCA 72 bp GTGCCCCACTCTTGGCCTTCGCTCCAGACCCATCACTaGCCCTTCCCCCACAAACAGCGGCAGCTACAGCCT +
Preference number: 6 (lower is better)
Translates to: VPHSWPSLQTHH*PFPHKQRQLQP
Trigger: AGGCTGTAGCTGCCGCTGTTTGTGGGGGAAGGGCCAGTGATGGGTCTGGAGCGAAGGCCAAGAGTGGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524748.6
CDS GCA 72 bp AGCCAGCTACAAGCAGTACACAAAGGTCATCGCATCTaGCCAGGTCTGATGGTGGCCCGGGAGGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SQLQAVHKGHRI*PGLMVAREGWG
Trigger: CCCCCACCCCTCCCGGGCCACCATCAGACCTGGGCAGATGCGATGACCTTTGTGTACTGCTTGTAGCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530155.5
ENST00000531999.5
CDS CCA 72 bp CCGATCCCCACAGCCCCAATGACCCTCAGGTGCTCCTaGATGAAGGTCTCCAACTTGGTGATGCAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PIPTAPMTLRCS*MKVSNLVMQPP
Trigger: GGGCGGCTGCATCACCAAGTTGGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000528011.2
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS CAA 90 bp GCCTCCTGTGAGCGGATCCACTCACTGTCTCGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGGAACTCCTGCTGCAGCTGGTCCACA +
Preference number: 6 (lower is better)
Translates to: ASCERIHSLSRQSCE*LLPQQWNSCCSWST
Trigger: TGTGGACCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTCACAGGAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000526693.5
ENST00000527341.5
ENST00000528011.2
ENST00000529810.5
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS TCA 72 bp GGTAGCGCTTGGTCATGGTGTCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCAGGCGCAGCAGGTTCCGAC +
Preference number: 6 (lower is better)
Translates to: GSAWSWCPSGSP*APCSAGAAGSD
Trigger: GTCGGAACCTGCTGCGCCTGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATGACCAAGCGCTACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529810.5
CDS CCA 72 bp AGGGGCAAGGACATGTCAGGTCACAGGTTACAGGTCTaGCCCAAGGGCCAGAGTGGGCCGGGTTCATTCTAC +
Preference number: 6 (lower is better)
Translates to: RGKDMSGHRLQV*PKGQSGPGSFY
Trigger: GTAGAATGAACCCGGCCCACTCTGGCCCTTGGGCCAGACCTGTAACCTGTGACCTGACATGTCCTTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525868.5
CDS CAA 72 bp GAGCGGATCCACTCACTGTCTCGCCAGTCCTGTGAGTaGTTGCTGCCACAGCAGTGGAACTCCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ERIHSLSRQSCE*LLPQQWNSCCS
Trigger: GCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGATCCGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000526693.5
ENST00000527341.5
ENST00000528011.2
ENST00000529810.5
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS CAA 90 bp AGCAGGTACTTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCTACCACGCGTCCGAGTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SRYLRQTVPHVVFFS*NSPILGLPRVRVRA
Trigger: GGCCCGGACTCGGACGCGTGGTAGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAAGTACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397421.5
ENST00000526661.5
ENST00000529810.5
ENST00000530155.5
CDS CAA 90 bp AGCAGGTACTTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCCAAGCCAGCCCAGAAGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: SRYLRQTVPHVVFFS*NSPILGPSQPRSRG
Trigger: GCCCCGACTTCTGGGCTGGCTTGGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAAGTACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530320.5
CDS TCA 72 bp GGTAGCGCTTGGTCATGGTGTCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGGGGTTGGGGTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GSAWSWCPSGSP*APCSAGVGVQE
Trigger: TTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATGACCAAGCGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS GCA 72 bp TCCACTCACTGTCTCGCCAGTCCTGTGAGTTGTTGCTaGCACAGCAGTGGAACTCCTGCTGCAGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: STHCLASPVSCC*HSSGTPAAAGP
Trigger: TGGACCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000526693.5
ENST00000527341.5
ENST00000528011.2
ENST00000529810.5
ENST00000530320.5
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS GCA 72 bp GGATCCACTCACTGTCTCGCCAGTCCTGTGAGTTGTTaGTGCCACAGCAGTGGAACTCCTGCTGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GSTHCLASPVSC*CHSSGTPAAAG
Trigger: ACCAGCTGCAGCAGGAGTTCCACTGCTGTGGCAGCAACAACTCACAGGACTGGCGAGACAGTGAGTGGATCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000526693.5
ENST00000527341.5
ENST00000528011.2
ENST00000529810.5
ENST00000530726.5
ENST00000532045.6
ENST00000532075.1
ENST00000645878.1
CDS GCA 72 bp GCAATGCCGATCCCCACAGCCCCAATGACCCTCAGGTaGTCCTGGATGAAGGTCTCCAACTTGGTGATGCAG +
Preference number: 6 (lower is better)
Translates to: AMPIPTAPMTLR*SWMKVSNLVMQ
Trigger: CTGCATCACCAAGTTGGAGACCTTCATCCAGGAGCACCTGAGGGTCATTGGGGCTGTGGGGATCGGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000528011.2
ENST00000530726.5
ENST00000532045.6
ENST00000645878.1
CDS CAA 90 bp AGCAGGTACTTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCAGCCGGGCTGGAAACGACTCCTC +
Preference number: 6 (lower is better)
Translates to: SRYLRQTVPHVVFFS*NSPILGQPGWKRLL
Trigger: GAGGAGTCGTTTCCAGCCCGGCTGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAAGTACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000524748.6
ENST00000525868.5
ENST00000528011.2
ENST00000530726.5
ENST00000531999.5
ENST00000532045.6
ENST00000642413.1
ENST00000645878.1
CDS TCA 72 bp GGTAGCGCTTGGTCATGGTGTCCTTCAGGTTCTCCTTaGGCTCCGTGTTCAGCTGCTGGTAGTAGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: GSAWSWCPSGSP*APCSAAGSRRR
Trigger: CCTACGCCTACTACCAGCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATGACCAAGCGCTACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000397421.5
ENST00000524748.6
ENST00000526693.5
ENST00000527341.5
ENST00000528011.2
ENST00000530320.5
ENST00000530726.5
ENST00000532045.6
ENST00000645878.1
CDS CAA 90 bp AGCAGGTACTTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCTGCAGCAGTGGGCAAGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: SRYLRQTVPHVVFFS*NSPILGLQQWASCE
Trigger: CTCACAGCTTGCCCACTGCTGCAGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAAGTACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525718.6
ENST00000527341.5
CDS CCA 72 bp GTGTCCTTCAGGTTCTCCTTGAGCTCCGTGTTCAGCTaGGGTTGGGGTGCAGGAAACTTCAGCCTCAGTCTA +
Preference number: 6 (lower is better)
Translates to: VSFRFSLSSVFS*GWGAGNFSLSL
Trigger: TAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS CAA 72 bp TTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCAGCCGGGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: LRQTVPHVVFFS*NSPILGQPGWK
Trigger: TTTCCAGCCCGGCTGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322008.9
ENST00000397420.9
ENST00000524748.6
ENST00000525868.5
ENST00000528011.2
ENST00000530726.5
ENST00000531999.5
ENST00000532045.6
ENST00000642413.1
ENST00000645878.1
CDS CAA 72 bp TTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCTACCACGCGTCCGA +
Preference number: 6 (lower is better)
Translates to: LRQTVPHVVFFS*NSPILGLPRVR
Trigger: TCGGACGCGTGGTAGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397421.5
ENST00000526661.5
ENST00000529810.5
ENST00000530155.5
CDS CAA 72 bp TTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCTGCAGCAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: LRQTVPHVVFFS*NSPILGLQQWA
Trigger: TGCCCACTGCTGCAGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525718.6
ENST00000527341.5
CDS CAA 72 bp CTTCAGGTTCTCCTTGAGCTCCGTGTTCAGCTGGGGTaGGGGTGCAGGAAACTTCAGCCTCAGTCTAAGACC +
Preference number: 6 (lower is better)
Translates to: LQVLLELRVQLG*GCRKLQPQSKT
Trigger: GGTCTTAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS CAA 72 bp TTGAGGCAAACGGTGCCACATGTTGTCTTCTTCTCGTaGAACTCACCCATCCTGGGGCCAAGCCAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: LRQTVPHVVFFS*NSPILGPSQPR
Trigger: TCTGGGCTGGCTTGGCCCCAGGATGGGTGAGTTCAACGAGAAGAAGACAACATGTGGCACCGTTTGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530320.5
CDS CAA 90 bp CATGGTGTCCTTCAGGTTCTCCTTGAGCTCCGTGTTCAGCTGGGGTaGGGGTGCAGGAAACTTCAGCCTCAGTCTAAGACCTTCCAAGGT +
Preference number: 6 (lower is better)
Translates to: HGVLQVLLELRVQLG*GCRKLQPQSKTFQG
Trigger: ACCTTGGAAGGTCTTAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAACCTGAAGGACACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532075.1
CDS GCA 72 bp GTTCTCCTTGAGCTCCGTGTTCAGCTGGGGTTGGGGTaGAGGAAACTTCAGCCTCAGTCTAAGACCTTCCAA +
Preference number: 6 (lower is better)
Translates to: VLLELRVQLGLG*RKLQPQSKTFQ
Trigger: TTGGAAGGTCTTAGACTGAGGCTGAAGTTTCCTGCACCCCAACCCCAGCTGAACACGGAGCTCAAGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532075.1