RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD14 (Homo sapiens)

Ensembl gene IDs: ENSG00000170458

Ensembl transcript IDs: ENST00000302014.11, ENST00000401743.6, ENST00000498971.6, ENST00000512545.1, ENST00000519715.1

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp GGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTaGAGCCAAGGCAGTTTGAGTCCATTCATTATTCTG +
Preference number: 3 (lower is better)
Translates to: GRKVLNVLTGLP*SQGSLSPFIIL
Trigger: CAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCACCTGCCGCCGCCAGTaGGGCGCACACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPTCRRQ*GAHACG
Trigger: CCCACAGGCGTGTGCGCCGCACTGGCGGCGGCAGGT...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCGTGGGGCTGCACACCTaGCGCCGCCAGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPVGLHT*RRQCGA
Trigger: TGCGCCGCACTGGCGGCGGCAGGTGTGCAGCCCCAC...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGTGGGGCTGCACACCTaGCGCCGCCAGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPVGLHT*RRQCGA
Trigger: TGCGCCGCACTGGCGGCGGCAGGTGTGCAGCCCCAC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGTGCGGCTCCCACTGTaGGCCGCCGCACGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTVRLPL*AAARGE
Trigger: CTCTCCGCGTGCGGCGGCTCACAGTGGGAGCCGCAC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGACCTGCCGCCGCCAGTaGGGCGCACACGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRTCRRQ*GAHACG
Trigger: CCCACAGGCGTGTGCGCCGCACTGGCGGCGGCAGGT...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACACGCCGGAGTTCATTaGGCCCTCGTGGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPHAGVH*ALVGEG
Trigger: GCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCCCGGGCCCCTTaGAGCAGCACCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLKPRAP*SSTRVP
Trigger: GGGAACCCTGGTGCTGCTCCAAGGGGCCCGGGGCTT...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCACGCCGGAGTTCATTaGGCCCTCGTGGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRHAGVH*ALVGEG
Trigger: GCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTCTAGGCTGTGGGGCTaGACACCTGCCGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLSRLWG*TPAAAS
Trigger: ACTGGCGGCGGCAGGTGTGCAGCCCCACAGCCTAGA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACTGAGGTCTAGGCTGTaGGGCTGCACACCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPLRSRL*GCTPAA
Trigger: GGCGGCAGGTGTGCAGCCCCACAGCCTAGACCTCAG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGTGCGGCTCCCACTGTaGGCCGCCGCACGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDVRLPL*AAARGE
Trigger: CTCTCCGCGTGCGGCGGCTCACAGTGGGAGCCGCAC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGCAGCGAGTTGTGGCTaGGGTCTAGGCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPAASCG*GLGCGA
Trigger: AGCCCCACAGCCTAGACCTCAGCCACAACTCGCTGC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCGCAGCGAGTTGTGGCTaGGGTCTAGGCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPAASCG*GLGCGA
Trigger: AGCCCCACAGCCTAGACCTCAGCCACAACTCGCTGC...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGCGGCGCACACGCCTGTaGGCGTCTCCATTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLRRTRL*ASPFLC
Trigger: ACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCG...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCTGAGGTCTAGGCTGTaGGGCTGCACACCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRLRSRL*GCTPAA
Trigger: GGCGGCAGGTGTGCAGCCCCACAGCCTAGACCTCAG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGCGCCTACCAGTAGCTaGGCAGGAACCTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTAPTSS*AGTCAA
Trigger: AGCCGCACAGGTTCCTGCTCAGCTACTGGTAGGCGC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACGAGCGTCAGTTCCTTaGGGCGGGAGTACGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPRASVP*GGSTLA
Trigger: TGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGTCCTCAACGTCCTaGCGGGACTCCCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLKSSTS*RDSPEA
Trigger: GGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTT...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATACCGTGTCAGCATACTaGCGCGGGTCGGCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYTVSAY*RGSASA
Trigger: TGCGGACGCCGACCCGCGGCAGTATGCTGACACGGT...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCTGAGCAGGAACCTGTaGGGCTCCCACTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTLSRNL*GSHCEP
Trigger: CGGCTCACAGTGGGAGCCGCACAGGTTCCTGCTCAG...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCCTGGCTTGAGCCACTaGTGCAGCTCGGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRPGLSH*CSSASQ
Trigger: TTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTCTAGGCTGTGGGGCTaGACACCTGCCGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVSRLWG*TPAAAS
Trigger: ACTGGCGGCGGCAGGTGTGCAGCCCCACAGCCTAGA...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATGGCAGCTCGTCAGGCTaGGGCGCCCTGTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYGSSSG*GALFSL
Trigger: CAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCC...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGGCAGCTCGTCAGGCTaGGGCGCCCTGTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVGSSSG*GALFSL
Trigger: CAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCGACAGGGTCGAACGTaGACAGGCTGGGACCACGCC +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYRQGRT*TGWDHA
Trigger: GGCGTGGTCCCAGCCTGTGCACGTTCGACCCTGTCG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGATGGCCGGGAACTTGTaGGGACAGAGAGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLMAGNL*GQRAAI
Trigger: GATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCAT...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCGGCGCACACGCCTGTaGGCGTCTCCATTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRRRTRL*ASPFLC
Trigger: ACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGGGAGTTCAGGGCGCTaGACCACATGCATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLGSSGR*TTCISE
Trigger: CTCCGAGATGCATGTGGTCCAGCGCCCTGAACTCCC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTTCATTGAGCCCTCGTaGGGGAGGGCAGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLFIEPS*GRAVPG
Trigger: CCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCATTCATTGAGCCCTCGTaGGGGAGGGCAGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPFIEPS*GRAVPG
Trigger: CCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAA...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACGAACGTGCACAGGCTaGGACCACGCCGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPRTCTG*DHAGVH
Trigger: ATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGCGAACGTGCACAGGCTaGGACCACGCCGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLRTCTG*DHAGVH
Trigger: ATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCG...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTAGTCTTCCGAACCTCTaGGCTCCGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTSLPNL*APDRLW
Trigger: CCAGAGCCTGTCCGGAGCTCAGAGGTTCGGAAGACT...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGAGTCTTCCGAACCTCTaGGCTCCGGACAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRSLPNL*APDRLW
Trigger: CCAGAGCCTGTCCGGAGCTCAGAGGTTCGGAAGACT...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGCACGCGGAGAGCCTTaGCCGTGTCAGCATACTGCC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVARGEP*PCQHTA
Trigger: GGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATGCACGCGGAGAGCCTTaGCCGTGTCAGCATACTGCC +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYARGEP*PCQHTA
Trigger: GGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGC...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGCGAACGACAGATTaGGGGAGTTCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRQRTTD*GSSGRW
Trigger: CCAGCGCCCTGAACTCCCTCAATCTGTCGTTCGCTG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACTGACGGGACTCCCCTaGAGCCAAGGCAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPLTGLP*SQGSLS
Trigger: ACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGGGCTTGAGCCACTGCTaGAGCTCGGCGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRGLSHC*SSASQE
Trigger: TTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCC...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGCAGTACCTTGAGGCCTaGCTTGAGCCACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLQYLEA*LEPLLQ
Trigger: CTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTG...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGCGCTAGATTCTGGATaGCCGGGAACTTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPALDSG*PGTCGD
Trigger: GTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTCGGACCAGTCGGGCTaGGGTTCGGAGAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVSDQSG*GSEKLQ
Trigger: CTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGA...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCAGCGAACGACAGATTaGGGGAGTTCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYQRTTD*GSSGRW
Trigger: CCAGCGCCCTGAACTCCCTCAATCTGTCGTTCGCTG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCAAGTCCTCAACGTCCTaGCGGGACTCCCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVKSSTS*RDSPEA
Trigger: GGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTT...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCAGTTCCCTCCTCTGTaGACCCTGATCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTQFPPL*TLITSP
Trigger: TGGGGAGGTGATCAGGGTTCACAGAGGAGGGAACTG...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR GCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATACCGTGTCAGCATACTaGCGCGGGTCGGCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDTVSAY*RGSASA
Trigger: TGCGGACGCCGACCCGCGGCAGTATGCTGACACGGT...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATGGCTTGAGCCACTGCTaGAGCTCGGCGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYGLSHC*SSASQE
Trigger: TTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCC...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATCGACAGGGTCGAACGTaGACAGGCTGGGACCACGCC +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDRQGRT*TGWDHA
Trigger: GGCGTGGTCCCAGCCTGTGCACGTTCGACCCTGTCG...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCAGGACGCGCGCTCCATaGTCGATAAGTCTTCCGAAC +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPRTRAP*SISLPN
Trigger: GTTCGGAAGACTTATCGACCATGGAGCGCGCGTCCT...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCACAAGGTTCTGGCGTaGTCGCAGAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTHKVLA*SQRRAP
Trigger: TGGTGCACGTCTCTGCGACCACGCCAGAACCTTGTG...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGCTCACAAGGTTCTaGCGTGGTCGCAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRQLTRF*RGRRDV
Trigger: CACGTCTCTGCGACCACGCCAGAACCTTGTGAGCTG...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGAGGCAGCGGAGGCATaGTGCCGGTTATCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLEAAEA*CRLSLG
Trigger: ACCTAAAGATAACCGGCACCATGCCTCCGCTGCCTC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCATGCGTAGGCGCAAGCTaGAAAGTGCAAGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPCVGAS*KVQVLW
Trigger: CCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCA...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTGCGTAGGCGCAAGCTaGAAAGTGCAAGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLCVGAS*KVQVLW
Trigger: CCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGCAGGCGAGTGTGCTTaGGCAATGCTCAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPAGECA*AMLSTL
Trigger: CAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGCACTCTGAGCTTGGCTaGCAGTCCTTTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLHSELG*QSFRHL
Trigger: CAGGTGCCTAAAGGACTGCCAGCCAAGCTCAGAGTG...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGAAACGGCTCTAGGTTaGGACCGCCGGCATGGATCT +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVETALG*DRRHGS
Trigger: AGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCGGTGGGGCAAAGGGTTaGATTGGTCGAAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPGGAKG*IGRKVL
Trigger: GAGGACTTTTCGACCAATTCAACCCTTTGCCCCACC...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGCAGCGGAGGCATGGTaGCGGTTATCTTTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTAAEAW*RLSLGP
Trigger: AGGACCTAAAGATAACCGGCACCATGCCTCCGCTGC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGGCAGCGGAGGCATGGTaGCGGTTATCTTTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRAAEAW*RLSLGP
Trigger: AGGACCTAAAGATAACCGGCACCATGCCTCCGCTGC...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCGCCCACGACACGTTaGGTAGGCGCAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYSPTTR*VGASWK
Trigger: TTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGA...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCAGTACCTTGAGGCCTaGCTTGAGCCACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYQYLEA*LEPLLQ
Trigger: CTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATTCGGACCAGTCGGGCTaGGGTTCGGAGAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDSDQSG*GSEKLQ
Trigger: CTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGA...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATCGAGCGTCAGTTCCTTaGGGCGGGAGTACGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDRASVP*GGSTLA
Trigger: TGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCG...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCAGGCTTCACACTTGTaGACTCTTCGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYQASHL*TLRLPL
Trigger: CAGAGGCAGCCGAAGAGTTCACAAGTGTGAAGCCTG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR GCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCGAGGTTCGGAGAAGTTaGAGACGCAGCGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPEVRRS*RRSGNL
Trigger: AAGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTC...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGCGCAAGCTGGAAAGTaGAAGTCCTGTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVAQAGK*KSCGFQ
Trigger: CTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTCTCCATTCCTGTGTTaGGCAGCGCTAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLSPFLC*AALDSG
Trigger: TCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGCTCCGGACAGGCTCTaGAAGTGCTTTAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLAPDRL*KCFSFF
Trigger: AAAGAAGCTAAAGCACTTCCAGAGCCTGTCCGGAGC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATAGGACGCGCGCTCCATaGTCGATAAGTCTTCCGAAC +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYRTRAP*SISLPN
Trigger: GTTCGGAAGACTTATCGACCATGGAGCGCGCGTCCT...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATACTGCAGACACACACTaGAAGGCTTCGGACCAGTCG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYTADTH*KASDQS
Trigger: CGACTGGTCCGAAGCCTTCCAGTGTGTGTCTGCAGT...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTTGAGACCGCCGGCATaGATCTCCACCTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYLRPPA*ISTSTA
Trigger: TGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAA...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGAGACCGCCGGCATaGATCTCCACCTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVLRPPA*ISTSTA
Trigger: TGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAA...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATGCAGGCGAGTGTGCTTaGGCAATGCTCAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYAGECA*AMLSTL
Trigger: CAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGC...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATATGGCCGGGAACTTGTaGGGACAGAGAGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDMAGNL*GQRAAI
Trigger: GATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCAT...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCCACTCTGAGCTTGGCTaGCAGTCCTTTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVHSELG*QSFRHL
Trigger: CAGGTGCCTAAAGGACTGCCAGCCAAGCTCAGAGTG...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGGTGGGGCAAAGGGTTaGATTGGTCGAAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVGGAKG*IGRKVL
Trigger: GAGGACTTTTCGACCAATTCAACCCTTTGCCCCACC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCTTGTGGAAGAGATTGTaGACCTCATCTGTTGGCACC +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPLWKRL*TSSVGT
Trigger: GGTGCCAACAGATGAGGTTCACAATCTCTTCCACAA...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGATCTCCACCTCTACTaGAGACACACACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVDLHLY*RHTLEG
Trigger: GCCTTCCAGTGTGTGTCTGCAGTAGAGGTGGAGATC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATTCGCCCACGACACGTTaGGTAGGCGCAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDSPTTR*VGASWK
Trigger: TTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGA...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCAAAGGCAGGCGAGTGTaGTTGGGCAATGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVKGRRV*LGNAQY
Trigger: GTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTT...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATAAAGGCAGGCGAGTGTaGTTGGGCAATGCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYKGRRV*LGNAQY
Trigger: GTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTT...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATCGCAGCGCTAGATTCTaGATGGCCGGGAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDRSARF*MAGNLW
Trigger: CCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCG...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGAGGTTCGGAGAAGTTaGAGACGCAGCGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVEVRRS*RRSGNL
Trigger: AAGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATACTGCAGACACACACTaGAAGGCTTCGGACCAGTCG +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDTADTH*KASDQS
Trigger: CGACTGGTCCGAAGCCTTCCAGTGTGTGTCTGCAGT...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGGCAAAGGGTTGAATTaGTCGAAAAGTCCTCAACGT +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPGKGLN*SKSPQR
Trigger: ACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGACAGGCTCTGGAAGTaGTTTAGCTTCTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTDRLWK*FSFFPT
Trigger: TGTAGGAAAGAAGCTAAAGCACTTCCAGAGCCTGTC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCATTCATTATTCTGTCTTaGATCTTAGGCAAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPFIILS*ILGKAP
Trigger: CGGGGCTTTGCCTAAGATCCAAGACAGAATAATGAA...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTTCATTATTCTGTCTTaGATCTTAGGCAAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLFIILS*ILGKAP
Trigger: CGGGGCTTTGCCTAAGATCCAAGACAGAATAATGAA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTGTCTTGGTTTATGTTaGTCTCCTGCCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVCLGLC*SPATKS
Trigger: GGATTTGGTGGCAGGAGATCAACATAAACCAAGACA...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGCTCCGGACAGGCTCTaGAAGTGCTTTAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDAPDRL*KCFSFF
Trigger: AAAGAAGCTAAAGCACTTCCAGAGCCTGTCCGGAGC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR TCA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCCCAGAGAATCTACTTaGTTCATTTCTTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPPREST*FISLTS
Trigger: AGAAGTCAAAGAAATGAATCAAGTAGATTCTCTGGG...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR GCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGACAGGCTCTGGAAGTaGTTTAGCTTCTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDDRLWK*FSFFPT
Trigger: TGTAGGAAAGAAGCTAAAGCACTTCCAGAGCCTGTC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR GCA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGCCTCAGATATTTAACTaGATGTTTTGTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLPQIFN*MFCGRD
Trigger: ATCTCTTCCACAAAACATGCAGTTAAATATCTGAGG...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR CCA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGGCAAAGGGTTGAATTaGTCGAAAAGTCCTCAACGT +
Preference number: 4 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDGKGLN*SKSPQR
Trigger: ACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CCA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCACTTCTTCCTTGTCTTaGTTTATGTTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVTSSLS*FMLISC
Trigger: GCAGGAGATCAACATAAACCAAGACAAGGAAGAAGT...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS TCA 90 bp TTGAGGCGGGAGTACGCTAGCACACGCAGGGCGCCTACCAGTAGCTaGGCAGGAACCTGTGCGGCTCCCACTGTGAGCCGCCGCACGCGG +
Preference number: 5 (lower is better)
Translates to: LRREYASTRRAPTSS*AGTCAAPTVSRRTR
Trigger: CCGCGTGCGGCGGCTCACAGTGGGAGCCGCACAGGTTCCTGCTCAGCTACTGGTAGGCGCCCTGCGTGTGCTAGCGTACTCCCGCCTCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 90 bp TGTGGGGCTGCACACCTGCCGCCGCCAGTGCGGCGCACACGCCTGTaGGCGTCTCCATTCCTGTGTTGCGCAGCGCTAGATTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: CGAAHLPPPVRRTRL*ASPFLCCAALDSGW
Trigger: CCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCGCACTGGCGGCGGCAGGTGTGCAGCCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 90 bp ACTGTGAGCCGCCGCACGCGGAGAGCCTTGACCGTGTCAGCATACTaGCGCGGGTCGGCGTCCGCATCGACGCGCTTTAGAAACGGCTCT +
Preference number: 5 (lower is better)
Translates to: TVSRRTRRALTVSAY*RGSASASTRFRNGS
Trigger: AGAGCCGTTTCTAAAGCGCGTCGATGCGGACGCCGACCCGCGGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCGGCGGCTCACAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS TCA 90 bp CGACAGGGTCGAACGTGCACAGGCTGGGACCACGCCGGAGTTCATTaGGCCCTCGTGGGGGAGGGCAGTTCCAGGGACCAGGAAGGGATT +
Preference number: 5 (lower is better)
Translates to: RQGRTCTGWDHAGVH*ALVGEGSSRDQEGI
Trigger: AATCCCTTCCTGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCGACCCTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 90 bp CCGCCAGTGCGGCGCACACGCCTGTGGGCGTCTCCATTCCTGTGTTaGGCAGCGCTAGATTCTGGATGGCCGGGAACTTGTGGGGACAGA +
Preference number: 5 (lower is better)
Translates to: PPVRRTRLWASPFLC*AALDSGWPGTCGDR
Trigger: TCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCGCACTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp GAACGTGCACAGGCTGGGACCACGCCGGAGTTCATTGAGCCCTCGTaGGGGAGGGCAGTTCCAGGGACCAGGAAGGGATTCCCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: ERAQAGTTPEFIEPS*GRAVPGTRKGFPSS
Trigger: ACTGGACGGGAATCCCTTCCTGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 90 bp GCTGCAGCTCGGCGAGCCAAGAACGCCCTGTCGCCCACGACACGTTaGGTAGGCGCAAGCTGGAAAGTGCAAGTCCTGTGGCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: AAARRAKNALSPTTR*VGASWKVQVLWLPE
Trigger: CTCTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCGAGCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS GCA 90 bp GCTTGGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAGCCACTGCTaGAGCTCGGCGAGCCAAGAACGCCCTGTCGCCCACGACACGTTG +
Preference number: 5 (lower is better)
Translates to: AWAMLSTLRPGLSHC*SSASQERPVAHDTL
Trigger: CAACGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS GCA 90 bp TGTGCTTGGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAGCCACTaGTGCAGCTCGGCGAGCCAAGAACGCCCTGTCGCCCACGACACG +
Preference number: 5 (lower is better)
Translates to: CAWAMLSTLRPGLSH*CSSASQERPVAHDT
Trigger: CGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 90 bp GCCAAGAACGCCCTGTCGCCCACGACACGTTGCGTAGGCGCAAGCTaGAAAGTGCAAGTCCTGTGGCTTCCAGAGGCAGCGGAGGCATGG +
Preference number: 5 (lower is better)
Translates to: AKNALSPTTRCVGAS*KVQVLWLPEAAEAW
Trigger: CCATGCCTCCGCTGCCTCTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGCGTTCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 90 bp ACGCCTGTGGGCGTCTCCATTCCTGTGTTGCGCAGCGCTAGATTCTaGATGGCCGGGAACTTGTGGGGACAGAGAGCCGCCATCAGTCCG +
Preference number: 5 (lower is better)
Translates to: TPVGVSIPVLRSARF*MAGNLWGQRAAISP
Trigger: CGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 90 bp GCGGGTCGGCGTCCGCATCGACGCGCTTTAGAAACGGCTCTAGGTTaGGACCGCCGGCATGGATCTCCACCTCTACTGCAGACACACACT +
Preference number: 5 (lower is better)
Translates to: AGRRPHRRALETALG*DRRHGSPPLLQTHT
Trigger: AGTGTGTGTCTGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCGCGTCGATGCGGACGCCGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS GCA 90 bp TTCCCGTCCAGTGTCAGGTTATCCACCTCGGGCAGCTCGTCAGGCTaGGGCGCCCTGTTCAGTCTGTTGCAGCTGAGATCGAGCACTCTG +
Preference number: 5 (lower is better)
Translates to: FPSSVRLSTSGSSSG*GALFSLLQLRSSTL
Trigger: CAGAGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCCCGAGGTGGATAACCTGACACTGGACGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp GGGAAGGCGCGAACCTGTTCGCAGGAAAAGGCAGGCGAGTGTGCTTaGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAGCCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GKARTCSQEKAGECA*AMLSTLRPGLSHCC
Trigger: GCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTTTCCTGCGAACAGGTTCGCGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 90 bp ATTCCTGTGTTGCGCAGCGCTAGATTCTGGATGGCCGGGAACTTGTaGGGACAGAGAGCCGCCATCAGTCCGCGTTCGCCCAGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: IPVLRSARFWMAGNL*GQRAAISPRSPSPG
Trigger: TCCTGGACTGGGCGAACGCGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp CTGTGGGCGTCTCCATTCCTGTGTTGCGCAGCGCTAGATTCTGGATaGCCGGGAACTTGTGGGGACAGAGAGCCGCCATCAGTCCGCGTT +
Preference number: 5 (lower is better)
Translates to: LWASPFLCCAALDSG*PGTCGDREPPSVRV
Trigger: AACGCGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAAGCCCCGGGCCCCTaGGAGCAGCACCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLKAPGP*EQHQGS
Trigger: GGAACCCTGGTGCTGCTCCAAGGGGCCCGGGGCTTT...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAAAGCCCCGGGCCCCTaGGAGCAGCACCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPKAPGP*EQHQGS
Trigger: GGAACCCTGGTGCTGCTCCAAGGGGCCCGGGGCTTT...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 90 bp GAGGCATGGTGCCGGTTATCTTTAGGTCCTCGAGCGTCAGTTCCTTaGGGCGGGAGTACGCTAGCACACGCAGGGCGCCTACCAGTAGCT +
Preference number: 5 (lower is better)
Translates to: EAWCRLSLGPRASVP*GGSTLAHAGRLPVA
Trigger: AGCTACTGGTAGGCGCCCTGCGTGTGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCGAGGACCTAAAGATAACCGGCACCATGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS-3UTR CAA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCTGGATGGCCGGGAACTaGTGGGGACAGAGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPWMAGN*WGQRAA
Trigger: GGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCA...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp CCCACGACACGTTGCGTAGGCGCAAGCTGGAAAGTGCAAGTCCTGTaGCTTCCAGAGGCAGCGGAGGCATGGTGCCGGTTATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: PTTRCVGASWKVQVL*LPEAAEAWCRLSLG
Trigger: ACCTAAAGATAACCGGCACCATGCCTCCGCTGCCTCTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACGCACGCGGAGAGCCTaGACCGTGTCAGCATACTGC +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPRTRRA*TVSAYC
Trigger: GCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGTCGCCCACGACACGTaGCGTAGGCGCAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLVAHDT*RRRKLE
Trigger: TTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGAC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCCACGCCGGAGTTCATaGAGCCCTCGTGGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYPRRSS*SPRGGG
Trigger: CCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCCCACGCCGGAGTTCATaGAGCCCTCGTGGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVPRRSS*SPRGGG
Trigger: CCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGG...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp GCATCGACGCGCTTTAGAAACGGCTCTAGGTTGAGACCGCCGGCATaGATCTCCACCTCTACTGCAGACACACACTGGAAGGCTTCGGAC +
Preference number: 5 (lower is better)
Translates to: ASTRFRNGSRLRPPA*ISTSTADTHWKASD
Trigger: GTCCGAAGCCTTCCAGTGTGTGTCTGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCGCGTCGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS-3UTR CAA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGGTCGCCCACGACACGTaGCGTAGGCGCAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRVAHDT*RRRKLE
Trigger: TTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGAC...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTGGATGGCCGGGAACTaGTGGGGACAGAGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVWMAGN*WGQRAA
Trigger: GGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCA...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCACCAGCGAACGACAGATaGAGGGAGTTCAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPPANDR*REFRAL
Trigger: CAGCGCCCTGAACTCCCTCAATCTGTCGTTCGCTGG...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 90 bp ACCTCTACTGCAGACACACACTGGAAGGCTTCGGACCAGTCGGGCTaGGGTTCGGAGAAGTTGCAGACGCAGCGGAAATCTTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: TSTADTHWKASDQSG*GSEKLQTQRKSSSS
Trigger: GGACGATGAAGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGAAGCCTTCCAGTGTGTGTCTGCAGTAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS GCA 90 bp CACACTGGAAGGCTTCGGACCAGTCGGGCTGAGGTTCGGAGAAGTTaGAGACGCAGCGGAAATCTTCATCGTCCAGCTCACAAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: HTGRLRTSRAEVRRS*RRSGNLHRPAHKVL
Trigger: CAGAACCTTGTGAGCTGGACGATGAAGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGAAGCCTTCCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGAAACGGCTCTAGGTaGAGACCGCCGGCATGGATC +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPRNGSR*RPPAWI
Trigger: GATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCT...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCAGAAACGGCTCTAGGTaGAGACCGCCGGCATGGATC +
Preference number: 5 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPRNGSR*RPPAWI
Trigger: GATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCT...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATCGCACGCGGAGAGCCTaGACCGTGTCAGCATACTGC +
Preference number: 5 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYRTRRA*TVSAYC
Trigger: GCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCG...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCACCTTGAGGCCTGGCTaGAGCCACTGCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVTLRPG*SHCCSS
Trigger: CGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGT...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGGCAGGCGAGTGTGCTaGGGCAATGCTCAGTACCTT +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLGRRVC*GNAQYL
Trigger: AAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCTCGCCCAGTCCAGGATaGTCAGACAGGTCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPSPSPG*SDRSRL
Trigger: CAGCCTAGACCTGTCTGACAATCCTGGACTGGGCGA...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCATCGCCCAGTCCAGGATaGTCAGACAGGTCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPSPSPG*SDRSRL
Trigger: CAGCCTAGACCTGTCTGACAATCCTGGACTGGGCGA...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTCGAGCACTCTGAGCTaGGCTGGCAGTCCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLSSTLS*AGSPLG
Trigger: GCCTAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 90 bp CCTGTTCAGTCTGTTGCAGCTGAGATCGAGCACTCTGAGCTTGGCTaGCAGTCCTTTAGGCACCTGTTCCAGCCCAGCGAACGACAGATT +
Preference number: 5 (lower is better)
Translates to: PVQSVAAEIEHSELG*QSFRHLFQPSERQI
Trigger: AATCTGTCGTTCGCTGGGCTGGAACAGGTGCCTAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGATCTCAGCTGCAACAGACTGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CAACGTCCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCGAGCGTCAGTTCCTaGAGGCGGGAGTACGCTAGC +
Preference number: 5 (lower is better)
Translates to: QRPDGTPLKPRQFESIHYSSVSS*RREYAS
Trigger: GCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCGA...ATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGGCAATGCTCAGTACCTaGAGGCCTGGCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRAMLST*RPGLSH
Trigger: GTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGC...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGGCAGGCGAGTGTGCTaGGGCAATGCTCAGTACCTT +
Preference number: 5 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTGRRVC*GNAQYL
Trigger: AAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCGTCTCCATTCCTGTGTaGCGCAGCGCTAGATTCTGG +
Preference number: 5 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPVSIPV*RSARFW
Trigger: CCAGAATCTAGCGCTGCGCAACACAGGAATGGAGAC...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGGCCCTGTTCAGTCTGTaGCAGCTGAGATCGAGCACT +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLALFSL*QLRSST
Trigger: AGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGC...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 90 bp ACAAGCAGGACGCGCGCTCCATGGTCGATAAGTCTTCCGAACCTCTaGGCTCCGGACAGGCTCTGGAAGTGCTTTAGCTTCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: TSRTRAPWSISLPNL*APDRLWKCFSFFPT
Trigger: TGTAGGAAAGAAGCTAAAGCACTTCCAGAGCCTGTCCGGAGCTCAGAGGTTCGGAAGACTTATCGACCATGGAGCGCGCGTCCTGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS-3UTR CAA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATCCAGCGAACGACAGATaGAGGGAGTTCAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDPANDR*REFRAL
Trigger: CAGCGCCCTGAACTCCCTCAATCTGTCGTTCGCTGG...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCGCCCTGTTCAGTCTGTaGCAGCTGAGATCGAGCACT +
Preference number: 5 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVALFSL*QLRSST
Trigger: AGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGC...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGCAATGCTCAGTACCTaGAGGCCTGGCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDAMLST*RPGLSH
Trigger: GTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATTCGAGCACTCTGAGCTaGGCTGGCAGTCCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDSSTLS*AGSPLG
Trigger: GCCTAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGA...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp AGGTGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTGGGCAAAGGGTTGAATaGGTCGAAAAGTCCTCAACG +
Preference number: 5 (lower is better)
Translates to: RWGKGLNWSKSPQRPDGTGQRVE*VEKSST
Trigger: CGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCC...AGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGAGGTGGGGCAAAGGGTaGAATTGGTCGAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRRWGKG*NWSKSP
Trigger: AGGACTTTTCGACCAATTCAACCCTTTGCCCCACCT...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGTCTCCATTCCTGTGTaGCGCAGCGCTAGATTCTGG +
Preference number: 5 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDVSIPV*RSARFW
Trigger: CCAGAATCTAGCGCTGCGCAACACAGGAATGGAGAC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp TGGGGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCATTCATTATTCTGTCTaGGATCTTAGGCAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: WGKGLNWSKSPQRPDGTPIHYSV*DLRQSP
Trigger: GGGGCTTTGCCTAAGATCCAAGACAGAATAATGAAT...GGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGCAAAGGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGTTGTCTTGGTTTATGTaGATCTCCTGCCACCAAATC +
Preference number: 5 (lower is better)
Translates to: GKGLNWSKSPQRPDGTPLLSWFM*ISCHQI
Trigger: GATTTGGTGGCAGGAGATCAACATAAACCAAGACAA...CAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAGACTTCTTCCTTGTCTaGGTTTATGTTGATCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPDFFLV*VYVDLL
Trigger: CAGGAGATCAACATAAACCAAGACAAGGAAGAAGTC...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTGGATGGGCAAAGGGTTGAATaGGTCGAAAAGTCCTCAACG +
Preference number: 5 (lower is better)
Translates to: GTPLKPRQFESIHYSVLDGQRVE*VEKSST
Trigger: CGTTGAGGACTTTTCGACCAATTCAACCCTTTGCCC...ATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp CCTGACGGGACTCCCCTGAAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCATTCATTATTCTGTCTaGGATCTTAGGCAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: PDGTPLKPRQFESIHYSVIHYSV*DLRQSP
Trigger: GGGGCTTTGCCTAAGATCCAAGACAGAATAATGAAT...GACAGAATAATGAATGGACTCAAACTGCCTTGGCTTCAGGGGAGTCCCGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS-3UTR CAA 90 bp GGGTTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCATCTTTGACTTCTTCCTaGTCTTGGTTTATGTTGATC +
Preference number: 5 (lower is better)
Translates to: GLNWSKSPQRPDGTPLKPSLTSS*SWFMLI
Trigger: GATCAACATAAACCAAGACAAGGAAGAAGTCAAAGA...TGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS-3UTR CAA 90 bp TTGAATTGGTCGAAAAGTCCTCAACGTCCTGACGGGACTCCCCTGAAGCCAAGGTCCCAGAGAATCTACTaGATTCATTTCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: LNWSKSPQRPDGTPLKPRSQRIY*IHFFDF
Trigger: GAAGTCAAAGAAATGAATCAAGTAGATTCTCTGGGA...CCTTGGCTTCAGGGGAGTCCCGTCAGGACGTTGAGGACTTTTCGACCAATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401743.6
CDS GCA 90 bp TCCTGCCACCAAATCCAAGTCCCTGAATATCCTCAGATATTTAACTaGATGTTTTGTGGAAGAGATTGTGAACCTCATCTGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: SCHQIQVPEYPQIFN*MFCGRDCEPHLLAP
Trigger: TGGTGCCAACAGATGAGGTTCACAATCTCTTCCACAAAACATGCAGTTAAATATCTGAGGATATTCAGGGACTTGGATTTGGTGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401743.6
ENST00000512545.1
CDS GCA 90 bp TTCATTTCTTTGACTTCTTCCTTGTCTTGGTTTATGTTGATCTCCTaGCACCAAATCCAAGTCCCTGAATATCCTCAGATATTTAACTGC +
Preference number: 5 (lower is better)
Translates to: FISLTSSLSWFMLIS*HQIQVPEYPQIFNC
Trigger: GCAGTTAAATATCTGAGGATATTCAGGGACTTGGATTTGGTGGCAGGAGATCAACATAAACCAAGACAAGGAAGAAGTCAAAGAAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS CAA 72 bp GCGGCTCCCACTGTGAGCCGCCGCACGCGGAGAGCCTaGACCGTGTCAGCATACTGCCGCGGGTCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: AAPTVSRRTRRA*TVSAYCRGSAS
Trigger: GGACGCCGACCCGCGGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCGGCGGCTCACAGTGGGAGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp GGAACCTGTGCGGCTCCCACTGTGAGCCGCCGCACGCGGAGAGCCTaGACCGTGTCAGCATACTGCCGCGGGTCGGCGTCCGCATCGACG +
Preference number: 6 (lower is better)
Translates to: GTCAAPTVSRRTRRA*TVSAYCRGSASAST
Trigger: CGTCGATGCGGACGCCGACCCGCGGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCGGCGGCTCACAGTGGGAGCCGCACAGGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS GCA 72 bp CGCCGCACGCGGAGAGCCTTGACCGTGTCAGCATACTaGCGCGGGTCGGCGTCCGCATCGACGCGCTTTAGA +
Preference number: 6 (lower is better)
Translates to: RRTRRALTVSAY*RGSASASTRFR
Trigger: TCTAAAGCGCGTCGATGCGGACGCCGACCCGCGGCAGTATGCTGACACGGTCAAGGCTCTCCGCGTGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp GCACACCTGCCGCCGCCAGTGCGGCGCACACGCCTGTaGGCGTCTCCATTCCTGTGTTGCGCAGCGCTAGAT +
Preference number: 6 (lower is better)
Translates to: AHLPPPVRRTRL*ASPFLCCAALD
Trigger: ATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCGCACTGGCGGCGGCAGGTGTGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 72 bp CGAACGTGCACAGGCTGGGACCACGCCGGAGTTCATTaGGCCCTCGTGGGGGAGGGCAGTTCCAGGGACCAG +
Preference number: 6 (lower is better)
Translates to: RTCTGWDHAGVH*ALVGEGSSRDQ
Trigger: CTGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp GCCGCCAGTGCGGCGCACACGCCTGTGGGCGTCTCCATTCCTGTGTaGCGCAGCGCTAGATTCTGGATGGCCGGGAACTTGTGGGGACAG +
Preference number: 6 (lower is better)
Translates to: AASAAHTPVGVSIPV*RSARFWMAGNLWGQ
Trigger: CTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCGCACTGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp CCGACAGGGTCGAACGTGCACAGGCTGGGACCACGCCGGAGTTCATaGAGCCCTCGTGGGGGAGGGCAGTTCCAGGGACCAGGAAGGGAT +
Preference number: 6 (lower is better)
Translates to: PTGSNVHRLGPRRSS*SPRGGGQFQGPGRD
Trigger: ATCCCTTCCTGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCGACCCTGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 72 bp GAGTACGCTAGCACACGCAGGGCGCCTACCAGTAGCTaGGCAGGAACCTGTGCGGCTCCCACTGTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: EYASTRRAPTSS*AGTCAAPTVSR
Trigger: GCGGCTCACAGTGGGAGCCGCACAGGTTCCTGCTCAGCTACTGGTAGGCGCCCTGCGTGTGCTAGCGTACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp CAGGCTGGGACCACGCCGGAGTTCATTGAGCCCTCGTaGGGGAGGGCAGTTCCAGGGACCAGGAAGGGATTC +
Preference number: 6 (lower is better)
Translates to: QAGTTPEFIEPS*GRAVPGTRKGF
Trigger: GAATCCCTTCCTGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp TCGAACGTGCACAGGCTGGGACCACGCCGGAGTTCATaGAGCCCTCGTGGGGGAGGGCAGTTCCAGGGACCA +
Preference number: 6 (lower is better)
Translates to: SNVHRLGPRRSS*SPRGGGQFQGP
Trigger: TGGTCCCTGGAACTGCCCTCCCCCACGAGGGCTCAATGAACTCCGGCGTGGTCCCAGCCTGTGCACGTTCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp GCAGGCGAGTGTGCTTGGGCAATGCTCAGTACCTTGAGGCCTGGCTaGAGCCACTGCTGCAGCTCGGCGAGCCAAGAACGCCCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: AGECAWAMLSTLRPG*SHCCSSASQERPVA
Trigger: GGCGACAGGGCGTTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp TGGGGACAGAGAGCCGCCATCAGTCCGCGTTCGCCCAGTCCAGGATaGTCAGACAGGTCTAGGCTGGTAAGGGCCGGGAAGGCGCGAACC +
Preference number: 6 (lower is better)
Translates to: WGQRAAISPRSPSPG*SDRSRLVRAGKART
Trigger: GGTTCGCGCCTTCCCGGCCCTTACCAGCCTAGACCTGTCTGACAATCCTGGACTGGGCGAACGCGGACTGATGGCGGCTCTCTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 72 bp CGGCGAGCCAAGAACGCCCTGTCGCCCACGACACGTTaGGTAGGCGCAAGCTGGAAAGTGCAAGTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: RRAKNALSPTTR*VGASWKVQVLW
Trigger: CCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp GCCCTGTCGCCCACGACACGTTGCGTAGGCGCAAGCTaGAAAGTGCAAGTCCTGTGGCTTCCAGAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ALSPTTRCVGAS*KVQVLWLPEAA
Trigger: CGCTGCCTCTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp TTGCGCAGCGCTAGATTCTGGATGGCCGGGAACTTGTaGGGACAGAGAGCCGCCATCAGTCCGCGTTCGCCC +
Preference number: 6 (lower is better)
Translates to: LRSARFWMAGNL*GQRAAISPRSP
Trigger: GGGCGAACGCGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp GCGGCGCACACGCCTGTGGGCGTCTCCATTCCTGTGTaGCGCAGCGCTAGATTCTGGATGGCCGGGAACTTG +
Preference number: 6 (lower is better)
Translates to: AAHTPVGVSIPV*RSARFWMAGNL
Trigger: CAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp GGCAGCTCGTCAGGCTGCGGCGCCCTGTTCAGTCTGTaGCAGCTGAGATCGAGCACTCTGAGCTTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GSSSGCGALFSL*QLRSSTLSLAG
Trigger: GCCAGCCAAGCTCAGAGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp CGCGGGTCGGCGTCCGCATCGACGCGCTTTAGAAACGGCTCTAGGTaGAGACCGCCGGCATGGATCTCCACCTCTACTGCAGACACACAC +
Preference number: 6 (lower is better)
Translates to: RGSASASTRFRNGSR*RPPAWISTSTADTH
Trigger: GTGTGTGTCTGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCGCGTCGATGCGGACGCCGACCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS CAA 90 bp TGCTGCAGCTCGGCGAGCCAAGAACGCCCTGTCGCCCACGACACGTaGCGTAGGCGCAAGCTGGAAAGTGCAAGTCCTGTGGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: CCSSASQERPVAHDT*RRRKLESASPVASR
Trigger: TCTGGAAGCCACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCGAGCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS GCA 72 bp CGGCGCACACGCCTGTGGGCGTCTCCATTCCTGTGTTaGGCAGCGCTAGATTCTGGATGGCCGGGAACTTGT +
Preference number: 6 (lower is better)
Translates to: RRTRLWASPFLC*AALDSGWPGTC
Trigger: ACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCCCACAGGCGTGTGCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 72 bp GGCGTCTCCATTCCTGTGTTGCGCAGCGCTAGATTCTaGATGGCCGGGAACTTGTGGGGACAGAGAGCCGCC +
Preference number: 6 (lower is better)
Translates to: GVSIPVLRSARF*MAGNLWGQRAA
Trigger: GGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp TCGGCGAGCCAAGAACGCCCTGTCGCCCACGACACGTaGCGTAGGCGCAAGCTGGAAAGTGCAAGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: SASQERPVAHDT*RRRKLESASPV
Trigger: CACAGGACTTGCACTTTCCAGCTTGCGCCTACGCAACGTGTCGTGGGCGACAGGGCGTTCTTGGCTCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 72 bp AGAGCCGCCATCAGTCCGCGTTCGCCCAGTCCAGGATaGTCAGACAGGTCTAGGCTGGTAAGGGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: RAAISPRSPSPG*SDRSRLVRAGK
Trigger: CTTCCCGGCCCTTACCAGCCTAGACCTGTCTGACAATCCTGGACTGGGCGAACGCGGACTGATGGCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp GTGTTGCGCAGCGCTAGATTCTGGATGGCCGGGAACTaGTGGGGACAGAGAGCCGCCATCAGTCCGCGTTCG +
Preference number: 6 (lower is better)
Translates to: VLRSARFWMAGN*WGQRAAISPRS
Trigger: CGAACGCGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp GGAGGCATGGTGCCGGTTATCTTTAGGTCCTCGAGCGTCAGTTCCTaGAGGCGGGAGTACGCTAGCACACGCAGGGCGCCTACCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GGMVPVIFRSSSVSS*RREYASTRRAPTSS
Trigger: GCTACTGGTAGGCGCCCTGCGTGTGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCGAGGACCTAAAGATAACCGGCACCATGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp CGGGAAGGCGCGAACCTGTTCGCAGGAAAAGGCAGGCGAGTGTGCTaGGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAGCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: REGANLFAGKGRRVC*GNAQYLEAWLEPLL
Trigger: CAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTTTCCTGCGAACAGGTTCGCGCCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp TCCATTCCTGTGTTGCGCAGCGCTAGATTCTGGATGGCCGGGAACTaGTGGGGACAGAGAGCCGCCATCAGTCCGCGTTCGCCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: SIPVLRSARFWMAGN*WGQRAAISPRSPSP
Trigger: TGGACTGGGCGAACGCGGACTGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp TCCACCTCGGGCAGCTCGTCAGGCTGCGGCGCCCTGTTCAGTCTGTaGCAGCTGAGATCGAGCACTCTGAGCTTGGCTGGCAGTCCTTTA +
Preference number: 6 (lower is better)
Translates to: STSGSSSGCGALFSL*QLRSSTLSLAGSPL
Trigger: TAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCCCGAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 72 bp AGTGTCAGGTTATCCACCTCGGGCAGCTCGTCAGGCTaGGGCGCCCTGTTCAGTCTGTTGCAGCTGAGATCG +
Preference number: 6 (lower is better)
Translates to: SVRLSTSGSSSG*GALFSLLQLRS
Trigger: CGATCTCAGCTGCAACAGACTGAACAGGGCGCCGCAGCCTGACGAGCTGCCCGAGGTGGATAACCTGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 72 bp GCAGCGGAAATCTTCATCGTCCAGCTCACAAGGTTCTaGCGTGGTCGCAGAGACGTGCACCAGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: AAEIFIVQLTRF*RGRRDVHQRQQ
Trigger: CTGCTGCCGCTGGTGCACGTCTCTGCGACCACGCCAGAACCTTGTGAGCTGGACGATGAAGATTTCCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS CCA 72 bp CGAGTGTGCTTGGGCAATGCTCAGTACCTTGAGGCCTaGCTTGAGCCACTGCTGCAGCTCGGCGAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: RVCLGNAQYLEA*LEPLLQLGEPR
Trigger: TCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 72 bp GTGCCGGTTATCTTTAGGTCCTCGAGCGTCAGTTCCTaGAGGCGGGAGTACGCTAGCACACGCAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: VPVIFRSSSVSS*RREYASTRRAP
Trigger: AGGCGCCCTGCGTGTGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCGAGGACCTAAAGATAACCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 72 bp TGTGCTTGGGCAATGCTCAGTACCTTGAGGCCTGGCTaGAGCCACTGCTGCAGCTCGGCGAGCCAAGAACGC +
Preference number: 6 (lower is better)
Translates to: CAWAMLSTLRPG*SHCCSSASQER
Trigger: GCGTTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp TCGCAGGAAAAGGCAGGCGAGTGTGCTTGGGCAATGCTCAGTACCTaGAGGCCTGGCTTGAGCCACTGCTGCAGCTCGGCGAGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: SQEKAGECAWAMLST*RPGLSHCCSSASQE
Trigger: TTCTTGGCTCGCCGAGCTGCAGCAGTGGCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTTTCCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CAA 90 bp GCTGGCAGTCCTTTAGGCACCTGTTCCAGCCCAGCGAACGACAGATaGAGGGAGTTCAGGGCGCTGGACCACATGCATCTCGGAGCGCTA +
Preference number: 6 (lower is better)
Translates to: AGSPLGTCSSPANDR*REFRALDHMHLGAL
Trigger: TAGCGCTCCGAGATGCATGTGGTCCAGCGCCCTGAACTCCCTCAATCTGTCGTTCGCTGGGCTGGAACAGGTGCCTAAAGGACTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 90 bp GGCGCCCTGTTCAGTCTGTTGCAGCTGAGATCGAGCACTCTGAGCTaGGCTGGCAGTCCTTTAGGCACCTGTTCCAGCCCAGCGAACGAC +
Preference number: 6 (lower is better)
Translates to: GALFSLLQLRSSTLS*AGSPLGTCSSPAND
Trigger: GTCGTTCGCTGGGCTGGAACAGGTGCCTAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGATCTCAGCTGCAACAGACTGAACAGGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS TCA 72 bp CGTCCGCATCGACGCGCTTTAGAAACGGCTCTAGGTTaGGACCGCCGGCATGGATCTCCACCTCTACTGCAG +
Preference number: 6 (lower is better)
Translates to: RPHRRALETALG*DRRHGSPPLLQ
Trigger: CTGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCGCGTCGATGCGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS TCA 72 bp TGCCGGTTATCTTTAGGTCCTCGAGCGTCAGTTCCTTaGGGCGGGAGTACGCTAGCACACGCAGGGCGCCTA +
Preference number: 6 (lower is better)
Translates to: CRLSLGPRASVP*GGSTLAHAGRL
Trigger: TAGGCGCCCTGCGTGTGCTAGCGTACTCCCGCCTCAAGGAACTGACGCTCGAGGACCTAAAGATAACCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp GGAAATCTTCATCGTCCAGCTCACAAGGTTCTGGCGTaGTCGCAGAGACGTGCACCAGCGGCAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GNLHRPAHKVLA*SQRRAPAAAAA
Trigger: TGCTGCTGCTGCCGCTGGTGCACGTCTCTGCGACCACGCCAGAACCTTGTGAGCTGGACGATGAAGATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS CAA 72 bp GCGTCCGCATCGACGCGCTTTAGAAACGGCTCTAGGTaGAGACCGCCGGCATGGATCTCCACCTCTACTGCA +
Preference number: 6 (lower is better)
Translates to: ASASTRFRNGSR*RPPAWISTSTA
Trigger: TGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCGCGTCGATGCGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS TCA 72 bp GCAGACACACACTGGAAGGCTTCGGACCAGTCGGGCTaGGGTTCGGAGAAGTTGCAGACGCAGCGGAAATCT +
Preference number: 6 (lower is better)
Translates to: ADTHWKASDQSG*GSEKLQTQRKS
Trigger: AGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGAAGCCTTCCAGTGTGTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS GCA 72 bp AGGCTTCGGACCAGTCGGGCTGAGGTTCGGAGAAGTTaGAGACGCAGCGGAAATCTTCATCGTCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: RLRTSRAEVRRS*RRSGNLHRPAH
Trigger: GTGAGCTGGACGATGAAGATTTCCGCTGCGTCTGCAACTTCTCCGAACCTCAGCCCGACTGGTCCGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS GCA 72 bp CAAGTCCTGTGGCTTCCAGAGGCAGCGGAGGCATGGTaGCGGTTATCTTTAGGTCCTCGAGCGTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: QVLWLPEAAEAW*RLSLGPRASVP
Trigger: AGGAACTGACGCTCGAGGACCTAAAGATAACCGGCACCATGCCTCCGCTGCCTCTGGAAGCCACAGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp GTGCAAGTCCTGTGGCTTCCAGAGGCAGCGGAGGCATaGTGCCGGTTATCTTTAGGTCCTCGAGCGTCAGTT +
Preference number: 6 (lower is better)
Translates to: VQVLWLPEAAEA*CRLSLGPRASV
Trigger: AACTGACGCTCGAGGACCTAAAGATAACCGGCACCATGCCTCCGCTGCCTCTGGAAGCCACAGGACTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp CGAACCTGTTCGCAGGAAAAGGCAGGCGAGTGTGCTTaGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RTCSQEKAGECA*AMLSTLRPGLS
Trigger: GCTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTTTCCTGCGAACAGGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS CCA 72 bp TCTCCATTCCTGTGTTGCGCAGCGCTAGATTCTGGATaGCCGGGAACTTGTGGGGACAGAGAGCCGCCATCA +
Preference number: 6 (lower is better)
Translates to: SPFLCCAALDSG*PGTCGDREPPS
Trigger: TGATGGCGGCTCTCTGTCCCCACAAGTTCCCGGCCATCCAGAATCTAGCGCTGCGCAACACAGGAATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp GCGAACCTGTTCGCAGGAAAAGGCAGGCGAGTGTGCTaGGGCAATGCTCAGTACCTTGAGGCCTGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: ANLFAGKGRRVC*GNAQYLEAWLE
Trigger: CTCAAGCCAGGCCTCAAGGTACTGAGCATTGCCCAAGCACACTCGCCTGCCTTTTCCTGCGAACAGGTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
CDS TCA 72 bp ACGCGCGCTCCATGGTCGATAAGTCTTCCGAACCTCTaGGCTCCGGACAGGCTCTGGAAGTGCTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: TRAPWSISLPNL*APDRLWKCFSF
Trigger: GAAGCTAAAGCACTTCCAGAGCCTGTCCGGAGCTCAGAGGTTCGGAAGACTTATCGACCATGGAGCGCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000512545.1
ENST00000519715.1
CDS CCA 72 bp TCTGTTGCAGCTGAGATCGAGCACTCTGAGCTTGGCTaGCAGTCCTTTAGGCACCTGTTCCAGCCCAGCGAA +
Preference number: 6 (lower is better)
Translates to: SVAAEIEHSELG*QSFRHLFQPSE
Trigger: TTCGCTGGGCTGGAACAGGTGCCTAAAGGACTGCCAGCCAAGCTCAGAGTGCTCGATCTCAGCTGCAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CCA 72 bp CGCTTTAGAAACGGCTCTAGGTTGAGACCGCCGGCATaGATCTCCACCTCTACTGCAGACACACACTGGAAG +
Preference number: 6 (lower is better)
Translates to: RFRNGSRLRPPA*ISTSTADTHWK
Trigger: CTTCCAGTGTGTGTCTGCAGTAGAGGTGGAGATCCATGCCGGCGGTCTCAACCTAGAGCCGTTTCTAAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302014.11
ENST00000401743.6
ENST00000498971.6
ENST00000519715.1
CDS CCA 72 bp AGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTTaGATCTTAGGCAAAGCCCCGGGCCCCTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SQGSLSPFIILS*ILGKAPGPLEQ
Trigger: CTGCTCCAAGGGGCCCGGGGCTTTGCCTAAGATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS CAA 72 bp AAGCCAAGGCAGTTTGAGTCCATTCATTATTCTGTCTaGGATCTTAGGCAAAGCCCCGGGCCCCTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: KPRQFESIHYSV*DLRQSPGPLGA
Trigger: TGCTCCAAGGGGCCCGGGGCTTTGCCTAAGATCCAAGACAGAATAATGAATGGACTCAAACTGCCTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302014.11
ENST00000401743.6
CDS GCA 72 bp CAAATCCAAGTCCCTGAATATCCTCAGATATTTAACTaGATGTTTTGTGGAAGAGATTGTGAACCTCATCTG +
Preference number: 6 (lower is better)
Translates to: QIQVPEYPQIFN*MFCGRDCEPHL
Trigger: CAGATGAGGTTCACAATCTCTTCCACAAAACATGCAGTTAAATATCTGAGGATATTCAGGGACTTGGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401743.6
ENST00000512545.1