RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD109 (Homo sapiens)

Ensembl gene IDs: ENSG00000156535

Ensembl transcript IDs: ENST00000287097.6, ENST00000422508.6, ENST00000437994.6, ENST00000474094.1, ENST00000649530.1

Found 545 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGCCAATGCCAGGGATCTTTAGGTCAGCAGTCATGTCAAGATaGTCTGATTCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGG +
Preference number: 1 (lower is better)
Translates to: PWPMPGIFRSAVMSR*SDSPQTQLLSQTAG
Trigger: CCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATGACTGCTGACCTAAAGATCCCTGGCATTGGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 90 bp TCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTTAGGTCAGCAGTCATGTCAAGATGC +
Preference number: 1 (lower is better)
Translates to: SNAHTPELEEVPQDP*PMPGIFRSAVMSRC
Trigger: GCATCTTGACATGACTGCTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAACCTCTTCTAGTTCAGGGGTGTGAGCATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATTTTGTTGTATCCCTGGCTCACAGTG +
Preference number: 1 (lower is better)
Translates to: SPQTQLLSQTAGRSV*SDLPSILLYPWLTV
Trigger: CACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 90 bp GGGAGGTCGGTCTGCAGTGACTTACCTAGTATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGGTCTAGGATCTTCGAATCGAAATCC +
Preference number: 1 (lower is better)
Translates to: GRSVCSDLPSILLYP*LTVSPWSRIFESKS
Trigger: GGATTTCGATTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGTCACTGCAGACCGACCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 90 bp TTCAGTCTCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATaGTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGGG +
Preference number: 1 (lower is better)
Translates to: FSLWKHRPVRKRGKI*WCFTKVPSEWKRRG
Trigger: CCCCCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGAGACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR TCA 90 bp TTCCTGTGTACCAAAGAGATTGACTCCACATCAACTGTCCCCTACTaGAAATCCAAACCATACAGGCTTGAAGGACCAGAACTGAGCCAC +
Preference number: 1 (lower is better)
Translates to: FLCTKEIDSTSTVPY*KSKPYRLEGPELSH
Trigger: GTGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTGGATTTTCAGTAGGGGACAGTTGATGTGGAGTCAATCTCTTTGGTACACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 90 bp GGGATCTTAAAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTaGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCACAG +
Preference number: 1 (lower is better)
Translates to: GILKVHSKHQMSLDN*QSNAHTPELEEVPQ
Trigger: CTGTGGAACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTTTAAGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 90 bp TGCACCCAAGAATACATCATGGCACCTTGCCCCATGGTAACCACTTaGCAGACTCAAATAATAACTACCCTCATAGGGAGAAATCTTGCC +
Preference number: 1 (lower is better)
Translates to: CTQEYIMAPCPMVTT*QTQIITTLIGRNLA
Trigger: GGCAAGATTTCTCCCTATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTATTCTTGGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 90 bp GACTTACCTAGTATTTTGTTGTATCCCTGGCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCGAAATCCCATGAAGCACATATTGCA +
Preference number: 1 (lower is better)
Translates to: DLPSILLYPWLTVSP*SRIFESKSHEAHIA
Trigger: TGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR TCA 90 bp CTCCACATCAACTGTCCCCTACTGAAAATCCAAACCATACAGGCTTaGAGGACCAGAACTGAGCCACATTCTATTAAAGTTATCAAAGAT +
Preference number: 1 (lower is better)
Translates to: LHINCPLLKIQTIQA*RTRTEPHSIKVIKD
Trigger: ATCTTTGATAACTTTAATAGAATGTGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTGGATTTTCAGTAGGGGACAGTTGATGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTGGGAAGGGAACAGATaGAGCTCCTCCTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDWEGNR*SSSCWL
Trigger: CAGCCAGCAGGAGGAGCTTCATCTGTTCCCTTCCCA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAGGATCCCTGGCCAATaGCAGGGATCTTTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLRIPGQ*QGSLGQ
Trigger: CTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGTGATCTCGGCTCACTaGAACCTCTGTCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLVISAH*NLCLSG
Trigger: ACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCAC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTT +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLVPQDP*PMPGIF
Trigger: AAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAAC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAATGCTCCTCAACCTCTaGGATGGTGTGAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLMLLNL*DGVKST
Trigger: TGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCAT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDILLYP*LTVSPW
Trigger: CCAGGGAGACACTGTGAGCCAGGGATACAACAAAAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCTCAACCTCTGAGATaGTGTGAAAAGCACAGTAAA +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPQPLR*CEKHSK
Trigger: TTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CAA 90 bp CTCCCTGGTCTAGGATCTTCGAATCGAAATCCCATGAAGCACATATaGCAGTGCTCTCTGACTCTCACCCCTGAAATAGAGCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LPGLGSSNRNPMKHI*QCSLTLTPEIELVW
Trigger: CCACACCAGCTCTATTTCAGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCCTAGACCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CAA 90 bp CAAACTGCAGGGAGGTCGGTCTGCAGTGACTTACCTAGTATTTTGTaGTATCCCTGGCTCACAGTGTCTCCCTGGTCTAGGATCTTCGAA +
Preference number: 2 (lower is better)
Translates to: QTAGRSVCSDLPSIL*YPWLTVSPWSRIFE
Trigger: TTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGTCACTGCAGACCGACCTCCCTGCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGCAGTAGGGCTAGGTTaGAGGTGGGAAGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVAVGLG*RWEGNR
Trigger: TCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAGGGCAATTAAAGATTaGGGTGCTCAGGATTCGGGG +
Preference number: 2 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHRAIKD*GAQDSG
Trigger: CCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGCAGTAGGGCTAGGTTaGAGGTGGGAAGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHAVGLG*RWEGNR
Trigger: TCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCATGTCAAGATGCTCTaGTTCTCCACAAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHHVKML*FSTNPA
Trigger: AGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAAGCACATATTGCAGTaGTCTCTGACTCTCACCCCT +
Preference number: 2 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHKHILQ*SLTLTP
Trigger: AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATT +
Preference number: 2 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVAGRSV*SDLPSI
Trigger: AATACTAGGTAAGTCACTGCAGACCGACCTCCCTGC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGCTTCTTTCCCAAACTaGAGGGAGGTCGGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRASFPN*REVGLQ
Trigger: CTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGAGGGGAAAGTCCTTTaGCAAGACCCTCCCCCAATT +
Preference number: 2 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLEGKVL*QDPPPI
Trigger: AATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCG +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVLTVSP*SRIFES
Trigger: CGATTCGAAGATCCTAGACCAGGGAGACACTGTGAG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 2 (lower is better)
Translates to: PGHLHSPMHQETVLANPLIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGGATCCCTGGCCAATaGCAGGGATCTTTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRIPGQ*QGSLGQ
Trigger: CTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTACTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCG +
Preference number: 2 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLLTVSP*SRIFES
Trigger: CGATTCGAAGATCCTAGACCAGGGAGACACTGTGAG...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVILLYP*LTVSPW
Trigger: CCAGGGAGACACTGTGAGCCAGGGATACAACAAAAT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATATGTCACTAGACAACTaGCAGTCTAATGCTCACACC +
Preference number: 2 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHMSLDN*QSNAHT
Trigger: GGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CAA 90 bp ATGCACCCAAGAATACATCATGGCACCTTGCCCCATGGTAACCACTaGGCAGACTCAAATAATAACTACCCTCATAGGGAGAAATCTTGC +
Preference number: 2 (lower is better)
Translates to: MHPRIHHGTLPHGNH*ADSNNNYPHREKSC
Trigger: GCAAGATTTCTCCCTATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTATTCTTGGGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACATGCTCCTCAACCTCTaGGATGGTGTGAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHMLLNL*DGVKST
Trigger: TGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCAT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCGAATCGAAATCCCATaGAGCACATATTGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRIEIP*STYCSA
Trigger: AGCACTGCAATATGTGCTTCATGGGATTTCGATTCG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCGAATCGAAATCCCATaGAGCACATATTGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVRIEIP*STYCSA
Trigger: AGCACTGCAATATGTGCTTCATGGGATTTCGATTCG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGGGCAATTAAAGATTaGGGTGCTCAGGATTCGGGG +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRAIKD*GAQDSG
Trigger: CCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGTTGTACACCATCCCTaGAACCCCATAGAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHVVHHP*NPIERK
Trigger: TTTTCTTTCTATGGGGTTGCAGGGATGGTGTACAAC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAGCACATATTGCAGTaGTCTCTGACTCTCACCCCT +
Preference number: 2 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKHILQ*SLTLTP
Trigger: AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAAGCACATATTGCAGTaGTCTCTGACTCTCACCCCT +
Preference number: 2 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHKHILQ*SLTLTP
Trigger: AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGCAGTCATGTCAAGATaGTCTGATTCTCCACAAACC +
Preference number: 2 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVAVMSR*SDSPQT
Trigger: GGTTTGTGGAGAATCAGAGCATCTTGACATGACTGC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCCTCAACCTCTGAGATaGTGTGAAAAGCACAGTAAA +
Preference number: 2 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPPQPLR*CEKHSK
Trigger: TTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGATGCTCCTCAACCTCTaGGATGGTGTGAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRMLLNL*DGVKST
Trigger: TGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCAT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCATGTCAAGATGCTCTaGTTCTCCACAAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRHVKML*FSTNPA
Trigger: AGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGTTGTACACCATCCCTaGAACCCCATAGAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVVVHHP*NPIERK
Trigger: TTTTCTTTCTATGGGGTTGCAGGGATGGTGTACAAC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCAACTGCATTCATTCTaGTCTTCCACACAAAGATCA +
Preference number: 2 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLQLHSF*SSTQRS
Trigger: TGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGAGGGGAAAGTCCTTTaGCAAGACCCTCCCCCAATT +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHEGKVL*QDPPPI
Trigger: AATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGTGATCTCGGCTCACTaGAACCTCTGTCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHVISAH*NLCLSG
Trigger: ACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCAC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCAACTGCATTCATTCTaGTCTTCCACACAAAGATCA +
Preference number: 2 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHQLHSF*SSTQRS
Trigger: TGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTACAACTGCATTCATTCTaGTCTTCCACACAAAGATCA +
Preference number: 2 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLQLHSF*SSTQRS
Trigger: TGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTG...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGTATTTGATACTTAACTaGCCTCTTCATAGACCACTG +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVYLILN*PLHRPL
Trigger: CAGTGGTCTATGAAGAGGGCAGTTAAGTATCAAATA...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCCTCAACCTCTGAGATaGTGTGAAAAGCACAGTAAA +
Preference number: 2 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRPQPLR*CEKHSK
Trigger: TTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR TCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTTAAGAAGTATCTACTaGGACCACTGGGCATGGGGT +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHLRSIY*DHWAWG
Trigger: ACCCCATGCCCAGTGGTCTCAGTAGATACTTCTTAA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHILLYP*LTVSPW
Trigger: CCAGGGAGACACTGTGAGCCAGGGATACAACAAAAT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 2 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 2 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAGAGGTAAGATATGCTaGTGTTTTACTAAGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHRGKIC*CFTKVP
Trigger: GGGAACCTTAGTAAAACACCAGCATATCTTACCTCT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp CACACCCCTGAACTAGAAGAGGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTTAGGTCAGCAGTCATG +
Preference number: 3 (lower is better)
Translates to: HTPELEEVPQDP*PMPGIFRSAVM
Trigger: CATGACTGCTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAACCTCTTCTAGTTCAGGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGGCAGTAGGGCTAGGTaGGAGGTGGGAAGGGAACAG +
Preference number: 3 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLGSRAR*EVGREQ
Trigger: CTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGGCAGTAGGGCTAGGTaGGAGGTGGGAAGGGAACAG +
Preference number: 3 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLGSRAR*EVGREQ
Trigger: CTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACATAAAGCAAATTCTTaGGAGCCCATGGCAATTACT +
Preference number: 3 (lower is better)
Translates to: PGHLHSPMHQETVLANPLHKANS*EPMAIT
Trigger: AGTAATTGCCATGGGCTCCAAAGAATTTGCTTTATG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 72 bp ACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATTTTGTTGTATCCCTGG +
Preference number: 3 (lower is better)
Translates to: TQLLSQTAGRSV*SDLPSILLYPW
Trigger: CCAGGGATACAACAAAATACTAGGTAAGTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCCCATGAAGCACATATaGCAGTGCTCTCTGACTCTC +
Preference number: 3 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHPMKHI*QCSLTL
Trigger: GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTACCCATGAAGCACATATaGCAGTGCTCTCTGACTCTC +
Preference number: 3 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLPMKHI*QCSLTL
Trigger: GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGG...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 72 bp ATGCCAGGGATCTTTAGGTCAGCAGTCATGTCAAGATaGTCTGATTCTCCACAAACCCAGCTTCTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: MPGIFRSAVMSR*SDSPQTQLLSQ
Trigger: TTGGGAAAGAAGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATGACTGCTGACCTAAAGATCCCTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp GTCTGCAGTGACTTACCTAGTATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGGTCTAGGATCTTCGAA +
Preference number: 3 (lower is better)
Translates to: VCSDLPSILLYP*LTVSPWSRIFE
Trigger: TTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACTAGGTAAGTCACTGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 72 bp TGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATaGTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAA +
Preference number: 3 (lower is better)
Translates to: WKHRPVRKRGKI*WCFTKVPSEWK
Trigger: TTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp AGTATTTTGTTGTATCCCTGGCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCGAAATCCCATGAAGCA +
Preference number: 3 (lower is better)
Translates to: SILLYPWLTVSP*SRIFESKSHEA
Trigger: TGCTTCATGGGATTTCGATTCGAAGATCCTAGACCAGGGAGACACTGTGAGCCAGGGATACAACAAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTaGCAGTCTAATGCTCACACCCCTGAACTAGAAGAG +
Preference number: 3 (lower is better)
Translates to: KVHSKHQMSLDN*QSNAHTPELEE
Trigger: CTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp GAATACATCATGGCACCTTGCCCCATGGTAACCACTTaGCAGACTCAAATAATAACTACCCTCATAGGGAGA +
Preference number: 3 (lower is better)
Translates to: EYIMAPCPMVTT*QTQIITTLIGR
Trigger: TCTCCCTATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR TCA 72 bp ACCAAAGAGATTGACTCCACATCAACTGTCCCCTACTaGAAATCCAAACCATACAGGCTTGAAGGACCAGAA +
Preference number: 3 (lower is better)
Translates to: TKEIDSTSTVPY*KSKPYRLEGPE
Trigger: TTCTGGTCCTTCAAGCCTGTATGGTTTGGATTTTCAGTAGGGGACAGTTGATGTGGAGTCAATCTCTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp AAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTaGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: KHRPVRKRGKIC*CFTKVPSEWKR
Trigger: TCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR GCA 72 bp AAAAACCAATGCACCCAAGAATACATCATGGCACCTTaGCCCATGGTAACCACTTGGCAGACTCAAATAATA +
Preference number: 3 (lower is better)
Translates to: KNQCTQEYIMAP*PMVTTWQTQII
Trigger: TATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTATTCTTGGGTGCATTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CCA 72 bp AACATGGAACTACCTTCTACCACCAATTCAATACACTaGGCAAACGTGGTAAATCTTGGCCTCAAGACAACA +
Preference number: 3 (lower is better)
Translates to: NMELPSTTNSIH*ANVVNLGLKTT
Trigger: TGTTGTCTTGAGGCCAAGATTTACCACGTTTGCCCAGTGTATTGAATTGGTGGTAGAAGGTAGTTCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTTACCTAGTATTTTGTaGTATCCCTGGCTCACAGTG +
Preference number: 3 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRLPSIL*YPWLTV
Trigger: CACTGTGAGCCAGGGATACAACAAAATACTAGGTAA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR TCA 72 bp AACTGTCCCCTACTGAAAATCCAAACCATACAGGCTTaGAGGACCAGAACTGAGCCACATTCTATTAAAGTT +
Preference number: 3 (lower is better)
Translates to: NCPLLKIQTIQA*RTRTEPHSIKV
Trigger: AACTTTAATAGAATGTGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTGGATTTTCAGTAGGGGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR-3UTR CAA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCATAAAGCAAATTCTTaGGAGCCCATGGCAATTACT +
Preference number: 3 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRHKANS*EPMAIT
Trigger: AGTAATTGCCATGGGCTCCAAAGAATTTGCTTTATG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR TCA 72 bp TTATATTACCCTTCGGAATACAGGGCAATTAAAGATTaGGGTGCTCAGGATTCGGGGATCTTAAAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: LYYPSEYRAIKD*GAQDSGILKVH
Trigger: GTGAACTTTTAAGATCCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCTGTATTCCGAAGGGTAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACGGCCAGCGCGGCGGTaGACACGCAGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLRPARR*TRRGGG
Trigger: CCCACCTCCTCTGCGTGTGCACCGCCGCGCTGGCCG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTATCCCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGGGA...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCGGCCAGCGCGGCGGTaGACACGCAGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHRPARR*TRRGGG
Trigger: CCCACCTCCTCTGCGTGTGCACCGCCGCGCTGGCCG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCGTGGGGTGTGGCTTaGCACCTCCTCCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPWGVA*HLLPDF
Trigger: AAAATCAGGGAGGAGGTGGCAAGCCACACCCCACGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGGCGGTCAGGAGCGGTaGGCCCTGCATCTCGACGGC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPGGQER*ALHLDG
Trigger: GCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGCCCGGCGTCCCAGCTaGCCGCGGAGAACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVARRPS*PRRTER
Trigger: GCGCTCTGTTCTCCGCGGCCAGCTGGGACGCCGGGC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGTGATGATGGGAGCCTaGAGCTCCATCCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLVMMGA*SSILTR
Trigger: CCTTGTGAGGATGGAGCTTCAGGCTCCCATCATCAC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCCGTGGGGTGTGGCTTaGCACCTCCTCCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDPWGVA*HLLPDF
Trigger: AAAATCAGGGAGGAGGTGGCAAGCCACACCCCACGG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGGCGGTCAGGAGCGGTaGGCCCTGCATCTCGACGGC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLGGQER*ALHLDG
Trigger: GCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGCCCGGCGTCCCAGCTaGCCGCGGAGAACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHARRPS*PRRTER
Trigger: GCGCTCTGTTCTCCGCGGCCAGCTGGGACGCCGGGC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGCAAGCTCTGCTGTCTaGAGGAGTAAGCGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLASSAV*RSKRLC
Trigger: ACACAACCGCTTACTCCTTCAGACAGCAGAGCTTGC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCAACGATGCCCAGGGTaGGTAAACAGGCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDQRCPG*VNRPIL
Trigger: AAGGATGGGCCTGTTTACTCACCCTGGGCATCGTTG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCGGCCAGCGCGGCGGTaGACACGCAGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRPARR*TRRGGG
Trigger: CCCACCTCCTCTGCGTGTGCACCGCCGCGCTGGCCG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGGAGCGGTGGGCCCTaGATCTCGACGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRSGGP*ISTASA
Trigger: GGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCACACGCAGAGGAGGTaGGCGGCGGTCAGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLHTQRR*AAVRSG
Trigger: ACCGCTCCTGACCGCCGCCCACCTCCTCTGCGTGTG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAGAGACAGTGAGGTTTaGTGCTGTCTTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLRDSEV*CCLEQL
Trigger: GAGCTGCTCAAGACAGCATCAAACCTCACTGTCTCT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACGAGGGGAAAGTCCTTTaGCAAGACCCTCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDEGKVL*QDPPPI
Trigger: AATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTC...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCATCTCGACGGCGTCTaGCTGGGCTACAGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPHLDGV*LGYSPL
Trigger: CAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGGCGGTCAGGAGCGGTaGGCCCTGCATCTCGACGGC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRGGQER*ALHLDG
Trigger: GCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTACACACGCAGAGGAGGTaGGCGGCGGTCAGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLHTQRR*AAVRSG
Trigger: ACCGCTCCTGACCGCCGCCCACCTCCTCTGCGTGTG...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGGGCACCGTGGGGTGTaGCTTGCCACCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLGHRGV*LATSSL
Trigger: CAGGGAGGAGGTGGCAAGCCACACCCCACGGTGCCC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAGGGCAATTAAAGATTaGGGTGCTCAGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDRAIKD*GAQDSG
Trigger: CCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCCTGTCCACTTGAGTaGAATGCCATAGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPCPLE*NAIELK
Trigger: CTTTAGCTCTATGGCATTTCACTCAAGTGGACAGGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAGCAAGAGGACTTGGTaGGCTAGGCCCCGTCACGGT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPSKRTW*ARPRHG
Trigger: ACCGTGACGGGGCCTAGCTCACCAAGTCCTCTTGCT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACAAGAGTCAGTTGGTTaGCATCAGCACGAGTTACCT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLQESVG*HQHELP
Trigger: AGGTAACTCGTGCTGATGGCAACCAACTGACTCTTG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGAGCAGTGCATAGGCTaGAACTTCAATATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLEQCIG*NFNIQG
Trigger: TCCCTGGATATTGAAGTTGCAGCCTATGCACTGCTC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTACATCATGGCACCTTaGCCCATGGTAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDYIMAP*PMVTTW
Trigger: CCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATGGGCTACAGTCCGCTaGCGGGGAAGTTCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLWATVR*RGSSRA
Trigger: TGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGGAGCGGTGGGCCCTaGATCTCGACGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRSGGP*ISTASA
Trigger: GGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGGGCCTGATGATCCCTaGGGCTGTCACCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHGPDDP*GCHQKP
Trigger: CGGTTTCTGGTGACAGCCCCAGGGATCATCAGGCCC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAATGGTTGGAAGGCTTaGAGCTCCACTGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLNGWKA*SSTGVV
Trigger: AACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTCGACGGCGTCTGCCTaGGCTACAGTCCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRSTASA*ATVRCR
Trigger: CCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTGGGAAGGGAACAGATaGAGCTCCTCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHWEGNR*SSSCWL
Trigger: CAGCCAGCAGGAGGAGCTTCATCTGTTCCCTTCCCA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACGTGTACCAAAGAGATTaGCTCCACATCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDVYQRD*LHINCP
Trigger: GGGACAGTTGATGTGGAGTCAATCTCTTTGGTACAC...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACGAGCAGTGCATAGGCTaGAACTTCAATATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDEQCIG*NFNIQG
Trigger: TCCCTGGATATTGAAGTTGCAGCCTATGCACTGCTC...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATCCCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGGGA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTGGGCTACAGTCCGCTaGCGGGGAAGTTCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRWATVR*RGSSRA
Trigger: TGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTCAACTGTAGCTCACTaGAATCCTCCAGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDSTVAH*NPPGLG
Trigger: TCCCAATCCTGGAGGATTCCAGTGAGCTACAGTTGA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCACCAACTGTCCCCTaGATACTACCATATAGCTTA +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPPTVP*ILPYSL
Trigger: TAAGCTATATGGTAGTATCCAGGGGACAGTTGGTGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTATCCTGTAACCCATGTTaGTGTCTAGCCAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLSCNPC*CLAKSK
Trigger: CTTGGATTTGGCTAGACACCAACATGGGTTACAGGA...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATGGGTTGGGGTGGGGTaGGCAGTAGGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLWVGVG*AVGLGW
Trigger: CCAACCTAGCCCTACTGCCCACCCCACCCCAACCCA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGGTTTGATGCTGTCTTaGGCAGCTCCGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHGLMLS*AAPPSQ
Trigger: CTGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCTTTACAGGACTTGGTaGGCTAGGCCCCGTCACGGT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVLYRTW*ARPRHG
Trigger: ACCGTGACGGGGCCTAGCTCACCAAGTCCTGTAAAG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTGGGAAGGGAACAGATaGAGCTCCTCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVWEGNR*SSSCWL
Trigger: CAGCCAGCAGGAGGAGCTTCATCTGTTCCCTTCCCA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATCCTTCGTGAGGTTTaGATCTGTCAATACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDILREV*ICQYPE
Trigger: CTCTGGGTATTGACAGATGCAAACCTCACGAAGGAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGTTGTACACCATCCCTaGAACCCCATAGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLVVHHP*NPIERK
Trigger: TTTTCTTTCTATGGGGTTGCAGGGATGGTGTACAAC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGGGCCTGATGATCCCTaGGGCTGTCACCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHGPDDP*GCHQKP
Trigger: CGGTTTCTGGTGACAGCCCCAGGGATCATCAGGCCC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTCTTCAAGAGTCAGTTaGTTGCCATCAGCACGAGTT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDSSRVS*LPSARV
Trigger: AACTCGTGCTGATGGCAACCAACTGACTCTTGAAGA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCCACCAACTGTCCCCTaGATACTACCATATAGCTTA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDPPTVP*ILPYSL
Trigger: TAAGCTATATGGTAGTATCCAGGGGACAGTTGGTGG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTTGCCCCATCCTCACTaGGAACCAGAAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPLPHPH*EPEGSA
Trigger: AGCAGACCCTTCTGGTTCCCAGTGAGGATGGGGCAA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCAAGGACGGCAGCCCTaGACATCACTGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPQGRQP*TSLQRS
Trigger: TGACCTTTGCAGTGATGTCCAGGGCTGCCGTCCTTG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGCAGTAGGGCTAGGTTaGAGGTGGGAAGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPAVGLG*RWEGNR
Trigger: TCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGGGCACCGTGGGGTGTaGCTTGCCACCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMGHRGV*LATSSL
Trigger: CAGGGAGGAGGTGGCAAGCCACACCCCACGGTGCCC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAAGGCCTTGTCTGTTTaGATGAAGACAGATATTCTC +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLKALSV*MKTDIL
Trigger: GAGAATATCTGTCTTCATTCAAACAGACAAGGCCTT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAACATCAATGTTAGGCTaGTACTTTCTATATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLTSMLG*YFLYPR
Trigger: CCTGGGATATAGAAAGTATCAGCCTAACATTGATGT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGCCACAGTGGTATCCTaGGTAGATGCAAAACCACCC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPATVVS*VDAKPP
Trigger: GGGTGGTTTTGCATCTACTCAGGATACCACTGTGGC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGGAACCAGAAGGGTCTaGTGGTGGCCTGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVGTRRV*WWPVAF
Trigger: AAATGCCACAGGCCACCAGCAGACCCTTCTGGTTCC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGAGGGGAAAGTCCTTTaGCAAGACCCTCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHEGKVL*QDPPPI
Trigger: AATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGTGATCTCGGCTCACTaGAACCTCTGTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPVISAH*NLCLSG
Trigger: ACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCAC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGTTGCCCCATCCTCACTaGGAACCAGAAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVLPHPH*EPEGSA
Trigger: AGCAGACCCTTCTGGTTCCCAGTGAGGATGGGGCAA...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCAAGGACGGCAGCCCTaGACATCACTGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVQGRQP*TSLQRS
Trigger: TGACCTTTGCAGTGATGTCCAGGGCTGCCGTCCTTG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAGAGGTAAGATATGCTaGTGTTTTACTAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLRGKIC*CFTKVP
Trigger: GGGAACCTTAGTAAAACACCAGCATATCTTACCTCT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCCATCCCCATTACAATaGCGCTTCTCGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVPSPLQ*RFSLLW
Trigger: CCACAGCAGCGAGAAGCGCCATTGTAATGGGGATGG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTCGACGGCGTCTGCCTaGGCTACAGTCCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHSTASA*ATVRCR
Trigger: CCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAGAGACAGTGAGGTTTaGTGCTGTCTTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPRDSEV*CCLEQL
Trigger: GAGCTGCTCAAGACAGCATCAAACCTCACTGTCTCT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAATGTATACTTTGCCGTaGTGGTACCATTTAAATGCT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLMYTLP*WYHLNA
Trigger: AGCATTTAAATGGTACCATCACGGCAAAGTATACAT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACAATATAATCCTTCGTaGGGTTTGCATCTGTCAATA +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLQYNPS*GLHLSI
Trigger: TATTGACAGATGCAAACCTCACGAAGGATTATATTG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGCCACAGTGGTATCCTaGGTAGATGCAAAACCACCC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLATVVS*VDAKPP
Trigger: GGGTGGTTTTGCATCTACTCAGGATACCACTGTGGC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCTTTACAGGACTTGGTaGGCTAGGCCCCGTCACGGT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRLYRTW*ARPRHG
Trigger: ACCGTGACGGGGCCTAGCTCACCAAGTCCTGTAAAG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCAAACCATACAGGCTTaGAGGACCAGAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPQTIQA*RTRTEP
Trigger: TGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCAAACCATACAGGCTTaGAGGACCAGAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHQTIQA*RTRTEP
Trigger: TGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPAGRSV*SDLPSI
Trigger: AATACTAGGTAAGTCACTGCAGACCGACCTCCCTGC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGCTTCTTTCCCAAACTaGAGGGAGGTCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHASFPN*REVGLQ
Trigger: CTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAGGATCCCTGGCCAATaGCAGGGATCTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVRIPGQ*QGSLGQ
Trigger: CTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGTGATCTCGGCTCACTaGAACCTCTGTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVVISAH*NLCLSG
Trigger: ACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCAC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAGGAATACACTCTTCTaGCTGTCCGACAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHRNTLF*LSDRSL
Trigger: GAGGCTTCTGTCGGACAGGCAGAAGAGTGTATTCCT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCATCTCGACGGCGTCTaGCTGGGCTACAGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMHLDGV*LGYSPL
Trigger: CAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAATATCCAGGGAGCGTaGCTGCCAGGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVNIQGA*LPGVRK
Trigger: CTTTCTGACTCCTGGCAGCCACGCTCCCTGGATATT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHLTVSP*SRIFES
Trigger: CGATTCGAAGATCCTAGACCAGGGAGACACTGTGAG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVVPQDP*PMPGIF
Trigger: AAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAAC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCCAACATTCAGTCTCTaGAAGCATCGGCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPPTFSL*KHRPVR
Trigger: TCTGACTGGCCGATGCTTCCAGAGACTGAATGTTGG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCGCTTCTCGCTGCTGTaGCAAACATCGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRFSLL*QTSQIQ
Trigger: CTGGATTTGCGATGTTTGCCACAGCAGCGAGAAGCG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGGTTTGATGCTGTCTTaGGCAGCTCCGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRGLMLS*AAPPSQ
Trigger: CTGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATGTATACTTTGCCGTaGTGGTACCATTTAAATGCT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDMYTLP*WYHLNA
Trigger: AGCATTTAAATGGTACCATCACGGCAAAGTATACAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACGACTTAAACAGACTATaGACTGCCATGCTACTTTTA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDDLNRL*TAMLLL
Trigger: TAAAAGTAGCATGGCAGTTCATAGTCTGTTTAAGTC...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCAATATAATCCTTCGTaGGGTTTGCATCTGTCAATA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDQYNPS*GLHLSI
Trigger: TATTGACAGATGCAAACCTCACGAAGGATTATATTG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCCCTGTCCACTTGAGTaGAATGCCATAGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHPCPLE*NAIELK
Trigger: CTTTAGCTCTATGGCATTTCACTCAAGTGGACAGGG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCAACGATGCCCAGGGTaGGTAAACAGGCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRQRCPG*VNRPIL
Trigger: AAGGATGGGCCTGTTTACTCACCCTGGGCATCGTTG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAAACAGACTATGAACTaGCATGCTACTTTTACTACC +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDKQTMN*HATFTT
Trigger: GGTAGTAAAAGTAGCATGGCAGTTCATAGTCTGTTT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGGGAAAAAGAACAGTTaGCCCATCCTCACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLGKKNS*PILTGN
Trigger: GTTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTACACCCAGAATTGCATaGCACCTTCTTGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPTPRIA*HLLVLL
Trigger: GAGCAGAACAAGAAGGTGGCATGCAATTCTGGGTGT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAAAATCCAAAACCATTTaGGGAAATATTAACTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGHLHSPMHQETVLANPLKSKTI*GNINCR
Trigger: ACGGCAGTTAATATTTCCGCAAATGGTTTTGGATTT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAAGCACATATTGCAGTaGTCTCTGACTCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPKHILQ*SLTLTP
Trigger: AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVAGRSV*SDLPSI
Trigger: AATACTAGGTAAGTCACTGCAGACCGACCTCCCTGC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAGGATCCCTGGCCAATaGCAGGGATCTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLRIPGQ*QGSLGQ
Trigger: CTGACCTAAAGATCCCTGGCATTGGCCAGGGATCCT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGTGATCTCGGCTCACTaGAACCTCTGTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHVISAH*NLCLSG
Trigger: ACCTGAGAGACAGAGGTTGCAGTGAGCCGAGATCAC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTACATCATGGCACCTTaGCCCATGGTAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLYIMAP*PMVTTW
Trigger: CCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAGGAATACACTCTTCTaGCTGTCCGACAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVRNTLF*LSDRSL
Trigger: GAGGCTTCTGTCGGACAGGCAGAAGAGTGTATTCCT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAATGGCGCTTCTCGCTaGTGTGGCAAACATCGCAAA +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVNGASR*CGKHRK
Trigger: TTTGCGATGTTTGCCACAGCAGCGAGAAGCGCCATT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGGGCCTGATGATCCCTaGGGCTGTCACCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMGPDDP*GCHQKP
Trigger: CGGTTTCTGGTGACAGCCCCAGGGATCATCAGGCCC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAATTACACAGGCTTTTaGAGTCCAAGAATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDNYTGF*SPRIFW
Trigger: CCAGAAAATTCTTGGACTCCAAAAGCCTGTGTAATT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAGAGACTTTCTCAGATaGTTCAGCTTTCACTTTACT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDRDFLR*FSFHFT
Trigger: AGTAAAGTGAAAGCTGAACCATCTGAGAAAGTCTCT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCTACAATCCCAACTATaGAGTCAGGCTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPLQSQL*SQAVSQ
Trigger: CTGTGACACAGCCTGACTCCATAGTTGGGATTGTAG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCTACAATCCCAACTATaGAGTCAGGCTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHLQSQL*SQAVSQ
Trigger: CTGTGACACAGCCTGACTCCATAGTTGGGATTGTAG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACCAGAAGGGTCTGCTaGTGGCCTGTGGCATTTATT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTRRVC*WPVAFI
Trigger: AATAAATGCCACAGGCCACCAGCAGACCCTTCTGGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAATATCCAGGGAGCGTaGCTGCCAGGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLNIQGA*LPGVRK
Trigger: CTTTCTGACTCCTGGCAGCCACGCTCCCTGGATATT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCACCGCCTGTCTCCTTaGCTCATAGTAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHHRLSP*LIVIHY
Trigger: ATAGTGGATTACTATGAGCCAAGGAGACAGGCGGTG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGCAGTAGGGCTAGGTTaGAGGTGGGAAGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRAVGLG*RWEGNR
Trigger: TCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVLTVSP*SRIFES
Trigger: CGATTCGAAGATCCTAGACCAGGGAGACACTGTGAG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLVPQDP*PMPGIF
Trigger: AAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAAC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCCAACATTCAGTCTCTaGAAGCATCGGCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLPTFSL*KHRPVR
Trigger: TCTGACTGGCCGATGCTTCCAGAGACTGAATGTTGG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTATGAGGCTAAGCCATTaGTGGAAGGACCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPMRLSH*WKDQEH
Trigger: ATGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCAT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATATGAGGCTAAGCCATTaGTGGAAGGACCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHMRLSH*WKDQEH
Trigger: ATGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCAT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGTTAAGAAGTATCTACTaGGACCACTGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVLRSIY*DHWAWG
Trigger: ACCCCATGCCCAGTGGTCTCAGTAGATACTTCTTAA...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGATGCTCCTCAACCTCTaGGATGGTGTGAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVMLLNL*DGVKST
Trigger: TGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCAT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCGAATCGAAATCCCATaGAGCACATATTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPRIEIP*STYCSA
Trigger: AGCACTGCAATATGTGCTTCATGGGATTTCGATTCG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCATGTCAAGATGCTCTaGTTCTCCACAAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLHVKML*FSTNPA
Trigger: AGCTGGGTTTGTGGAGAATCAGAGCATCTTGACATG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAGGGCAATTAAAGATTaGGGTGCTCAGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHRAIKD*GAQDSG
Trigger: CCCCGAATCCTGAGCACCTCAATCTTTAATTGCCCT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCCTGTCCACTTGAGTaGAATGCCATAGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVPCPLE*NAIELK
Trigger: CTTTAGCTCTATGGCATTTCACTCAAGTGGACAGGG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTCAACTGTCCCCTACTaGAAATCCAAACCATACAGG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHSTVPY*KSKPYR
Trigger: CCTGTATGGTTTGGATTTTCAGTAGGGGACAGTTGA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACAGGCCCATCCTTGTaGGGAGAAATTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTGPSL*GEIHSN
Trigger: GTTGCTATGAATTTCTCCTCACAAGGATGGGCCTGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTTCAAAGACTCCTTCTaGTTCCAGGACAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPFKDSF*FQDRDS
Trigger: ACTGTCTCTGTCCTGGAAGCAGAAGGAGTCTTTGAA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCAAGAGTCAGTTGGTTaGCATCAGCACGAGTTACCT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVQESVG*HQHELP
Trigger: AGGTAACTCGTGCTGATGGCAACCAACTGACTCTTG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATATCCTTCGTGAGGTTTaGATCTGTCAATACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHILREV*ICQYPE
Trigger: CTCTGGGTATTGACAGATGCAAACCTCACGAAGGAT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGGGAAAAAGAACAGTTaGCCCATCCTCACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHGKKNS*PILTGN
Trigger: GTTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGGGAAAAAGAACAGTTaGCCCATCCTCACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLGKKNS*PILTGN
Trigger: GTTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAAGCTGACAACCAAGTaGTCCCAGAAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHKLTTK*SQKGHN
Trigger: ATTATGACCCTTCTGGGAGCACTTGGTTGTCAGCTT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGATGACACCCAGAATTaGATGCCACCTTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPDDTQN*MPPSCS
Trigger: AGAACAAGAAGGTGGCATGCAATTCTGGGTGTCATC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTGCGGAAATATTAACTaGCGTTGGCTGTACCACAGC +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVCGNIN*RWLYHS
Trigger: GCTGTGGTACAGCCAACGGCAGTTAATATTTCCGCA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAAATCCAAAACCATTTaGGGAAATATTAACTGCCGT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDKSKTI*GNINCR
Trigger: ACGGCAGTTAATATTTCCGCAAATGGTTTTGGATTT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGCAGTCATGTCAAGATaGTCTGATTCTCCACAAACC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHAVMSR*SDSPQT
Trigger: GGTTTGTGGAGAATCAGAGCATCTTGACATGACTGC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCTGAATATTTCCACGTaGAGGATACAGTATTACATA +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDLNIST*RIQYYI
Trigger: TATGTAATACTGTATCCTGCACGTGGAAATATTCAG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACTACATCATGGCACCTTaGCCCATGGTAACCACTTGG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHYIMAP*PMVTTW
Trigger: CCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTA...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTCTTCAAGAGTCAGTTaGTTGCCATCAGCACGAGTT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHSSRVS*LPSARV
Trigger: AACTCGTGCTGATGGCAACCAACTGACTCTTGAAGA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGAAGGGTCTGCTGGTaGCCTGTGGCATTTATTTCA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRRVCW*PVAFIS
Trigger: TGAAATAAATGCCACAGGCCACCAGCAGACCCTTCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACACCAGAAGGGTCTGCTaGTGGCCTGTGGCATTTATT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHTRRVC*WPVAFI
Trigger: AATAAATGCCACAGGCCACCAGCAGACCCTTCTGGT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAGGAGTCAGAAAGTTTaGACTCTGATGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPRSQKV*TLMTPR
Trigger: TCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAATATCCAGGGAGCGTaGCTGCCAGGAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRNIQGA*LPGVRK
Trigger: CTTTCTGACTCCTGGCAGCCACGCTCCCTGGATATT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACGACACTGAAGCATCTTaGGTATTTGAAACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDDTEAS*VFETLK
Trigger: CTTTAAAGTTTCAAATACCCAAGATGCTTCAGTGTC...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCTCACAGTGTCTCCCTaGTCTAGGATCTTCGAATCG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHLTVSP*SRIFES
Trigger: CGATTCGAAGATCCTAGACCAGGGAGACACTGTGAG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGTTCCACAGGATCCCTaGCCAATGCCAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRVPQDP*PMPGIF
Trigger: AAAGATCCCTGGCATTGGCCAGGGATCCTGTGGAAC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTATGTCACTAGACAACTaGCAGTCTAATGCTCACACC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPMSLDN*QSNAHT
Trigger: GGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 4 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCGCTTCTCGCTGCTGTaGCAAACATCGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRFSLL*QTSQIQ
Trigger: CTGGATTTGCGATGTTTGCCACAGCAGCGAGAAGCG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGGTTTGATGCTGTCTTaGGCAGCTCCGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMGLMLS*AAPPSQ
Trigger: CTGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAATTCCCAAAAGCACTaGAAGAGCCATCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVNSQKH*KSHLPS
Trigger: AGAGGGAAGATGGCTCTTTCAGTGCTTTTGGGAATT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAATTCCCAAAAGCACTaGAAGAGCCATCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLNSQKH*KSHLPS
Trigger: AGAGGGAAGATGGCTCTTTCAGTGCTTTTGGGAATT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCAGAGAAATTGCTTCTaGAGGCACCATAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVQRNCF*RHHKAT
Trigger: AGTGGCTTTATGGTGCCTTCAGAAGCAATTTCTCTG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGTGATGATGGGAGCCTaGAGCTCCATCCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMVMMGA*SSILTR
Trigger: CCTTGTGAGGATGGAGCTTCAGGCTCCCATCATCAC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTGGGAAGGGAACAGATaGAGCTCCTCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHWEGNR*SSSCWL
Trigger: CAGCCAGCAGGAGGAGCTTCATCTGTTCCCTTCCCA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCGAATCGAAATCCCATaGAGCACATATTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRIEIP*STYCSA
Trigger: AGCACTGCAATATGTGCTTCATGGGATTTCGATTCG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCAAACCATACAGGCTTaGAGGACCAGAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRQTIQA*RTRTEP
Trigger: TGGCTCAGTTCTGGTCCTTCAAGCCTGTATGGTTTG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTCAACTGTCCCCTACTaGAAATCCAAACCATACAGG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVSTVPY*KSKPYR
Trigger: CCTGTATGGTTTGGATTTTCAGTAGGGGACAGTTGA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTATCCTTCGTGAGGTTTaGATCTGTCAATACCCAGAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVILREV*ICQYPE
Trigger: CTCTGGGTATTGACAGATGCAAACCTCACGAAGGAT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCAAGTCTCTGGAAAATaGTTTCGGACATGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVQVSGK*FRTCGL
Trigger: CAGTCCACATGTCCGAAAGCATTTTCCAGAGACTTG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGGAACCAGAAGGGTCTaGTGGTGGCCTGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMGTRRV*WWPVAF
Trigger: AAATGCCACAGGCCACCAGCAGACCCTTCTGGTTCC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCCCAAGCTATTTCTTTaGCTGCTTAGCCACCTCATA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLPKLFL*LLSHLI
Trigger: TATGAGGTGGCTAAGCAGGCAAAGAAATAGCTTGGG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTGGTATCCTGAGTAGATaGAAAACCACCCAAGCTATT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPGILSR*KTTQAI
Trigger: AATAGCTTGGGTGGTTTTGCATCTACTCAGGATACC...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGCTTCTTTCCCAAACTaGAGGGAGGTCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMASFPN*REVGLQ
Trigger: CTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGCAGTCATGTCAAGATaGTCTGATTCTCCACAAACC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVAVMSR*SDSPQT
Trigger: GGTTTGTGGAGAATCAGAGCATCTTGACATGACTGC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGGAATACACTCTTCTaGCTGTCCGACAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRNTLF*LSDRSL
Trigger: GAGGCTTCTGTCGGACAGGCAGAAGAGTGTATTCCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATCAACTGTAGCTCACTaGAATCCTCCAGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLSTVAH*NPPGLG
Trigger: TCCCAATCCTGGAGGATTCCAGTGAGCTACAGTTGA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACTCAACTGTAGCTCACTaGAATCCTCCAGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHSTVAH*NPPGLG
Trigger: TCCCAATCCTGGAGGATTCCAGTGAGCTACAGTTGA...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGTCCTGTAACCCATGTTaGTGTCTAGCCAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVSCNPC*CLAKSK
Trigger: CTTGGATTTGGCTAGACACCAACATGGGTTACAGGA...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGGAGTCAGAAAGTTTaGACTCTGATGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRSQKV*TLMTPR
Trigger: TCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLPVTVT*IFVLSV
Trigger: TACAGAAAGGACAAATATCCAAGTGACCGTGACGGG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVPVTVT*IFVLSV
Trigger: TACAGAAAGGACAAATATCCAAGTGACCGTGACGGG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAATATTAACTGCCGTTaGCTGTACCACAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVNINCR*LYHSKL
Trigger: GAGCTTGCTGTGGTACAGCCAACGGCAGTTAATATT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCACCGCCTGTCTCCTTaGCTCATAGTAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHHRLSP*LIVIHY
Trigger: ATAGTGGATTACTATGAGCCAAGGAGACAGGCGGTG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCCTCAACCTCTGAGATaGTGTGAAAAGCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHPQPLR*CEKHSK
Trigger: TTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAATTTTGTTGTATCCCTaGCTCACAGTGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLILLYP*LTVSPW
Trigger: CCAGGGAGACACTGTGAGCCAGGGATACAACAAAAT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATATTCTTTGGAGCCCATaGCAATTACTTTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHILWSP*QLLFPL
Trigger: CAGGGGAAAAAGTAATTGCCATGGGCTCCAAAGAAT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCCAACATTCAGTCTCTaGAAGCATCGGCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRPTFSL*KHRPVR
Trigger: TCTGACTGGCCGATGCTTCCAGAGACTGAATGTTGG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CAA 72 bp CTAGGATCTTCGAATCGAAATCCCATGAAGCACATATaGCAGTGCTCTCTGACTCTCACCCCTGAAATAGAG +
Preference number: 4 (lower is better)
Translates to: LGSSNRNPMKHI*QCSLTLTPEIE
Trigger: CTCTATTTCAGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
3UTR CAA 72 bp AGAATACATCATGGCACCTTGCCCCATGGTAACCACTaGGCAGACTCAAATAATAACTACCCTCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: RIHHGTLPHGNH*ADSNNNYPHRE
Trigger: CTCCCTATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCCATGATGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCTAAAATCATCTGGGTaGCAGCATCAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRLKSSG*QHQKQW
Trigger: CCACTGCTTCTGATGCTGTCACCCAGATGATTTTAG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGCCACAGTGGTATCCTaGGTAGATGCAAAACCACCC +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMATVVS*VDAKPP
Trigger: GGGTGGTTTTGCATCTACTCAGGATACCACTGTGGC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTGCTATCTACAATTCTaGATATTTCCACGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPCYLQF*IFPRAG
Trigger: TCCTGCACGTGGAAATATTCAGAATTGTAGATAGCA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTGCTATCTACAATTCTaGATATTTCCACGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHCYLQF*IFPRAG
Trigger: TCCTGCACGTGGAAATATTCAGAATTGTAGATAGCA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTCTTTTGATGAGACATaGAAACACAACTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHSFDET*KHNSLA
Trigger: AGCCAGTGAGTTGTGTTTTCATGTCTCATCAAAAGA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGTGTACCAAAGAGATTaGCTCCACATCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRVYQRD*LHINCP
Trigger: GGGACAGTTGATGTGGAGTCAATCTCTTTGGTACAC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATTCAAAGACTCCTTCTaGTTCCAGGACAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLFKDSF*FQDRDS
Trigger: ACTGTCTCTGTCCTGGAAGCAGAAGGAGTCTTTGAA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCAAGAGTCAGTTGGTTaGCATCAGCACGAGTTACCT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRQESVG*HQHELP
Trigger: AGGTAACTCGTGCTGATGGCAACCAACTGACTCTTG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCCTCTCAGCATATTCTaGATTGTCATAAACACCATC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHPLSIF*IVINTI
Trigger: GATGGTGTTTATGACAATGCAGAATATGCTGAGAGG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCAAGTCTCTGGAAAATaGTTTCGGACATGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHQVSGK*FRTCGL
Trigger: CAGTCCACATGTCCGAAAGCATTTTCCAGAGACTTG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAAGCTGACAACCAAGTaGTCCCAGAAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHKLTTK*SQKGHN
Trigger: ATTATGACCCTTCTGGGAGCACTTGGTTGTCAGCTT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAGCTGACAACCAAGTaGTCCCAGAAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKLTTK*SQKGHN
Trigger: ATTATGACCCTTCTGGGAGCACTTGGTTGTCAGCTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGACACCCAGAATTGCATaGCACCTTCTTGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRTPRIA*HLLVLL
Trigger: GAGCAGAACAAGAAGGTGGCATGCAATTCTGGGTGT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGATGACACCCAGAATTaGATGCCACCTTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHDDTQN*MPPSCS
Trigger: AGAACAAGAAGGTGGCATGCAATTCTGGGTGTCATC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCCCAAGCTATTTCTTTaGCTGCTTAGCCACCTCATA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHPKLFL*LLSHLI
Trigger: TATGAGGTGGCTAAGCAGGCAAAGAAATAGCTTGGG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGGTATCCTGAGTAGATaGAAAACCACCCAAGCTATT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLGILSR*KTTQAI
Trigger: AATAGCTTGGGTGGTTTTGCATCTACTCAGGATACC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCGTTGTACACCATCCCTaGAACCCCATAGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLVVHHP*NPIERK
Trigger: TTTTCTTTCTATGGGGTTGCAGGGATGGTGTACAAC...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCATAGGGAGAAATCTTaGCAAGGGAGAATTTACAAC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPHREKS*QGRIYN
Trigger: GTTGTAAATTCTCCCTTGGCAAGATTTCTCCCTATG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCATAGGGAGAAATCTTaGCAAGGGAGAATTTACAAC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHHREKS*QGRIYN
Trigger: GTTGTAAATTCTCCCTTGGCAAGATTTCTCCCTATG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTACGTCTCCTTTCACTaGCTTCCCATATGTATACTT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHYVSFH*LPICIL
Trigger: AAGTATACATATGGGAAGCCAGTGAAAGGAGACGTA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTACGTCTCCTTTCACTaGCTTCCCATATGTATACTT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPYVSFH*LPICIL
Trigger: AAGTATACATATGGGAAGCCAGTGAAAGGAGACGTA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGAAGGGTCTGCTGGTaGCCTGTGGCATTTATTTCA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRRVCW*PVAFIS
Trigger: TGAAATAAATGCCACAGGCCACCAGCAGACCCTTCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTTGCCCCATCCTCACTaGGAACCAGAAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHLPHPH*EPEGSA
Trigger: AGCAGACCCTTCTGGTTCCCAGTGAGGATGGGGCAA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATATGAATCACTCTTCCTaGATCCCAAAATTCACCGTT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHMNHSS*IPKFTV
Trigger: AACGGTGAATTTTGGGATCCAGGAAGAGTGATTCAT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAGGAGTCAGAAAGTTTaGACTCTGATGACACCCAGA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHRSQKV*TLMTPR
Trigger: TCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGCAGTAGGGCTAGGTTaGAGGTGGGAAGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHAVGLG*RWEGNR
Trigger: TCTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAATGTCACTAGACAACTaGCAGTCTAATGCTCACACC +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLMSLDN*QSNAHT
Trigger: GGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTGTCCTAGAATTGTTTaGCTACTAGGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHCPRIV*LLGFPN
Trigger: GTTGGGAAAACCTAGTAGCCAAACAATTCTAGGACA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCCCATGGTAACCACTTaGCAGACTCAAATAATAACT +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHPMVTT*QTQIIT
Trigger: AGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCCATCCCCATTACAATaGCGCTTCTCGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHPSPLQ*RFSLLW
Trigger: CCACAGCAGCGAGAAGCGCCATTGTAATGGGGATGG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCTGTTGGATCAAATTTaGTTTGGGGTCCTTAATGAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVLLDQI*FGVLNE
Trigger: CTCATTAAGGACCCCAAATCAAATTTGATCCAACAG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAAGATCACTTTGTTGTaGCAACCACTGTTGGATCAA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLKITLL*QPLLDQ
Trigger: TTGATCCAACAGTGGTTGTCACAACAAAGTGATCTT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACATCAATGTTAGGCTaGTACTTTCTATATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLTSMLG*YFLYPR
Trigger: CCTGGGATATAGAAAGTATCAGCCTAACATTGATGT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCATTCCCTCAGAAGTCTaGAATTGTAAGAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLIPSEV*NCKKCE
Trigger: CTCACACTTCTTACAATTTCAGACTTCTGAGGGAAT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTATTCCCTCAGAAGTCTaGAATTGTAAGAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVIPSEV*NCKKCE
Trigger: CTCACACTTCTTACAATTTCAGACTTCTGAGGGAAT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAGGTTGAGTTTTCCATaGTCATATTCCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPRLSFP*SYSTFF
Trigger: GAAGAAAGTGGAATATGATCATGGAAAACTCAACCT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCAACTGCATTCATTCTaGTCTTCCACACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVQLHSF*SSTQRS
Trigger: TGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTTTTACTTAATGTCTTaGGTCTGCCAGACATGTCAA +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPFYLMS*VCQTCQ
Trigger: TTGACATGTCTGGCAGACTCAAGACATTAAGTAAAA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTCTTTTGATGAGACATaGAAACACAACTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLSFDET*KHNSLA
Trigger: AGCCAGTGAGTTGTGTTTTCATGTCTCATCAAAAGA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGACTATGAACTGCCATaGTACTTTTACTACCAAGGA +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVDYELP*YFYYQG
Trigger: TCCTTGGTAGTAAAAGTAGCATGGCAGTTCATAGTC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAAACAGACTATGAACTaGCATGCTACTTTTACTACC +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHKQTMN*HATFTT
Trigger: GGTAGTAAAAGTAGCATGGCAGTTCATAGTCTGTTT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCTCTCAGCATATTCTaGATTGTCATAAACACCATC +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVPLSIF*IVINTI
Trigger: GATGGTGTTTATGACAATGCAGAATATGCTGAGAGG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCCTCTCAGCATATTCTaGATTGTCATAAACACCATC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVPLSIF*IVINTI
Trigger: GATGGTGTTTATGACAATGCAGAATATGCTGAGAGG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGATGACACCCAGAATTaGATGCCACCTTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRDDTQN*MPPSCS
Trigger: AGAACAAGAAGGTGGCATGCAATTCTGGGTGTCATC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGCAGGGAGGTCGGTCTaGAGTGACTTACCTAGTATT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMAGRSV*SDLPSI
Trigger: AATACTAGGTAAGTCACTGCAGACCGACCTCCCTGC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTATTTGATACTTAACTaGCCTCTTCATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPYLILN*PLHRPL
Trigger: CAGTGGTCTATGAAGAGGGCAGTTAAGTATCAAATA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCATAGGGAGAAATCTTaGCAAGGGAGAATTTACAAC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVHREKS*QGRIYN
Trigger: GTTGTAAATTCTCCCTTGGCAAGATTTCTCCCTATG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAATAAAATCTCATCCTaGGTACGTCCGGTTACACGT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHNKISS*VRPVTR
Trigger: ACGTGTAACCGGACGTACCCAGGATGAGATTTTATT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAATAAAATCTCATCCTaGGTACGTCCGGTTACACGT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLNKISS*VRPVTR
Trigger: ACGTGTAACCGGACGTACCCAGGATGAGATTTTATT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAGACAGATATTCTCTTaGTCTCAAATGATAAGCGGG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRQIFS*SQMISG
Trigger: CCCGCTTATCATTTGAGACCAAGAGAATATCTGTCT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTACGTCTCCTTTCACTaGCTTCCCATATGTATACTT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVYVSFH*LPICIL
Trigger: AAGTATACATATGGGAAGCCAGTGAAAGGAGACGTA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTCTTCAAGAGTCAGTTaGTTGCCATCAGCACGAGTT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRSSRVS*LPSARV
Trigger: AACTCGTGCTGATGGCAACCAACTGACTCTTGAAGA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAATGCTTTCGGACATGTaGACTGCTACCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLMLSDM*TATQRK
Trigger: TTTTCTTTGGGTAGCAGTCCACATGTCCGAAAGCAT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACATGCTTTCGGACATGTaGACTGCTACCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHMLSDM*TATQRK
Trigger: TTTTCTTTGGGTAGCAGTCCACATGTCCGAAAGCAT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTCCTGTAACCCATGTTaGTGTCTAGCCAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRSCNPC*CLAKSK
Trigger: CTTGGATTTGGCTAGACACCAACATGGGTTACAGGA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGACCAGAAGGGTCTGCTaGTGGCCTGTGGCATTTATT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMTRRVC*WPVAFI
Trigger: AATAAATGCCACAGGCCACCAGCAGACCCTTCTGGT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGATGAATCACTCTTCCTaGATCCCAAAATTCACCGTT +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVMNHSS*IPKFTV
Trigger: AACGGTGAATTTTGGGATCCAGGAAGAGTGATTCAT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAGAGGTAAGATATGCTaGTGTTTTACTAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRGKIC*CFTKVP
Trigger: GGGAACCTTAGTAAAACACCAGCATATCTTACCTCT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTGTCCTAGAATTGTTTaGCTACTAGGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLCPRIV*LLGFPN
Trigger: GTTGGGAAAACCTAGTAGCCAAACAATTCTAGGACA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCCATGGTAACCACTTaGCAGACTCAAATAATAACT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVPMVTT*QTQIIT
Trigger: AGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATAAACGTGGTAAATCTTaGCCTCAAGACAACATAAGA +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHKRGKS*PQDNIR
Trigger: TCTTATGTTGTCTTGAGGCCAAGATTTACCACGTTT...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTCTACAAATGGAACATaGAACTACCTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLSTNGT*NYLLPP
Trigger: TGGTGGTAGAAGGTAGTTCCATGTTCCATTTGTAGA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTCTACAAATGGAACATaGAACTACCTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVSTNGT*NYLLPP
Trigger: TGGTGGTAGAAGGTAGTTCCATGTTCCATTTGTAGA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTTTAGTAATCTGAAATaGGCGCGCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRFSNLK*ARLTAE
Trigger: CTCTGCTGTTAGGCGCGCCCATTTCAGATTACTAAA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAAGGCCTTGTCTGTTTaGATGAAGACAGATATTCTC +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHKALSV*MKTDIL
Trigger: GAGAATATCTGTCTTCATTCAAACAGACAAGGCCTT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR TCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAGATCACTTTGTTGTaGCAACCACTGTTGGATCAA +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKITLL*QPLLDQ
Trigger: TTGATCCAACAGTGGTTGTCACAACAAAGTGATCTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCATGTATACTTTGCCGTaGTGGTACCATTTAAATGCT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLMYTLP*WYHLNA
Trigger: AGCATTTAAATGGTACCATCACGGCAAAGTATACAT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCTAAAATCATCTGGGTaGCAGCATCAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMLKSSG*QHQKQW
Trigger: CCACTGCTTCTGATGCTGTCACCCAGATGATTTTAG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACACATCAATGTTAGGCTaGTACTTTCTATATCCCAGG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHTSMLG*YFLYPR
Trigger: CCTGGGATATAGAAAGTATCAGCCTAACATTGATGT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGGTTGAGTTTTCCATaGTCATATTCCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRLSFP*SYSTFF
Trigger: GAAGAAAGTGGAATATGATCATGGAAAACTCAACCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGATGCTCCTCAACCTCTaGGATGGTGTGAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMMLLNL*DGVKST
Trigger: TGTGCTTTTCACACCATCTCAGAGGTTGAGGAGCAT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTTTTACTTAATGTCTTaGGTCTGCCAGACATGTCAA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLFYLMS*VCQTCQ
Trigger: TTGACATGTCTGGCAGACTCAAGACATTAAGTAAAA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGAACGTAAAAGGTTCTaGAACTCATCTATGAATGAG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVERKRF*NSSMNE
Trigger: CTCATTCATAGATGAGTTTCAGAACCTTTTACGTTC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACGACTATGAACTGCCATaGTACTTTTACTACCAAGGA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHDYELP*YFYYQG
Trigger: TCCTTGGTAGTAAAAGTAGCATGGCAGTTCATAGTC...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAAACAGACTATGAACTaGCATGCTACTTTTACTACC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVKQTMN*HATFTT
Trigger: GGTAGTAAAAGTAGCATGGCAGTTCATAGTCTGTTT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAAGAACATCTCCAATTaGAGTGATCTGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLKNISN*SDLNSF
Trigger: GAAAGAGTTCAGATCACTGCAATTGGAGATGTTCTT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAAGAACATCTCCAATTaGAGTGATCTGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVKNISN*SDLNSF
Trigger: GAAAGAGTTCAGATCACTGCAATTGGAGATGTTCTT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGACACCCAGAATTGCATaGCACCTTCTTGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMTPRIA*HLLVLL
Trigger: GAGCAGAACAAGAAGGTGGCATGCAATTCTGGGTGT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTGCGGAAATATTAACTaGCGTTGGCTGTACCACAGC +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMCGNIN*RWLYHS
Trigger: GCTGTGGTACAGCCAACGGCAGTTAATATTTCCGCA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTATTTGATACTTAACTaGCCTCTTCATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVYLILN*PLHRPL
Trigger: CAGTGGTCTATGAAGAGGGCAGTTAAGTATCAAATA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAATGGCGCTTCTCGCTaGTGTGGCAAACATCGCAAA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHNGASR*CGKHRK
Trigger: TTTGCGATGTTTGCCACAGCAGCGAGAAGCGCCATT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAATTACACAGGCTTTTaGAGTCCAAGAATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVNYTGF*SPRIFW
Trigger: CCAGAAAATTCTTGGACTCCAAAAGCCTGTGTAATT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGAGACTTTCTCAGATaGTTCAGCTTTCACTTTACT +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRDFLR*FSFHFT
Trigger: AGTAAAGTGAAAGCTGAACCATCTGAGAAAGTCTCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGAATGGTTGGAAGGCTTaGAGCTCCACTGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMNGWKA*SSTGVV
Trigger: AACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTTTACTAAAATCATCTaGGTGACAGCATCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLFTKII*VTASEA
Trigger: TGCTTCTGATGCTGTCACCCAGATGATTTTAGTAAA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTTTACTAAAATCATCTaGGTGACAGCATCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVFTKII*VTASEA
Trigger: TGCTTCTGATGCTGTCACCCAGATGATTTTAGTAAA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGACACTGAAGCATCTTaGGTATTTGAAACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHDTEAS*VFETLK
Trigger: CTTTAAAGTTTCAAATACCCAAGATGCTTCAGTGTC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCACCGCCTGTCTCCTTaGCTCATAGTAATCCACTAT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMHRLSP*LIVIHY
Trigger: ATAGTGGATTACTATGAGCCAAGGAGACAGGCGGTG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGATTCTTTGGAGCCCATaGCAATTACTTTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRILWSP*QLLFPL
Trigger: CAGGGGAAAAAGTAATTGCCATGGGCTCCAAAGAAT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 4 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAAACGTGGTAAATCTTaGCCTCAAGACAACATAAGA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLKRGKS*PQDNIR
Trigger: TCTTATGTTGTCTTGAGGCCAAGATTTACCACGTTT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACCAATTCAATACACTaGGCAAACGTGGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTNSIH*ANVVNL
Trigger: AAGATTTACCACGTTTGCCCAGTGTATTGAATTGGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGTAAGGCTTAAAATCTaGGAAGAGTGTAACAATGCG +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRVRLKI*EECNNA
Trigger: CGCATTGTTACACTCTTCTCAGATTTTAAGCCTTAC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAAGATCACTTTGTTGTaGCAACCACTGTTGGATCAA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRKITLL*QPLLDQ
Trigger: TTGATCCAACAGTGGTTGTCACAACAAAGTGATCTT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACCAATATAATCCTTCGTaGGGTTTGCATCTGTCAATA +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHQYNPS*GLHLSI
Trigger: TATTGACAGATGCAAACCTCACGAAGGATTATATTG...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCTAAAATCATCTGGGTaGCAGCATCAGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHLKSSG*QHQKQW
Trigger: CCACTGCTTCTGATGCTGTCACCCAGATGATTTTAG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGATGAGGCTAAGCCATTaGTGGAAGGACCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMMRLSH*WKDQEH
Trigger: ATGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCAT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGAATTCCCAAAAGCACTaGAAGAGCCATCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMNSQKH*KSHLPS
Trigger: AGAGGGAAGATGGCTCTTTCAGTGCTTTTGGGAATT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGCAACTGCATTCATTCTaGTCTTCCACACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRQLHSF*SSTQRS
Trigger: TGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTG...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAAGAACATCTCCAATTaGAGTGATCTGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHKNISN*SDLNSF
Trigger: GAAAGAGTTCAGATCACTGCAATTGGAGATGTTCTT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTGCGGAAATATTAACTaGCGTTGGCTGTACCACAGC +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHCGNIN*RWLYHS
Trigger: GCTGTGGTACAGCCAACGGCAGTTAATATTTCCGCA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCTGAATATTTCCACGTaGAGGATACAGTATTACATA +
Preference number: 4 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVLNIST*RIQYYI
Trigger: TATGTAATACTGTATCCTGCACGTGGAAATATTCAG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCTGAATATTTCCACGTaGAGGATACAGTATTACATA +
Preference number: 4 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLLNIST*RIQYYI
Trigger: TATGTAATACTGTATCCTGCACGTGGAAATATTCAG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCCACCAACTGTCCCCTaGATACTACCATATAGCTTA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMPPTVP*ILPYSL
Trigger: TAAGCTATATGGTAGTATCCAGGGGACAGTTGGTGG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAATTACACAGGCTTTTaGAGTCCAAGAATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHNYTGF*SPRIFW
Trigger: CCAGAAAATTCTTGGACTCCAAAAGCCTGTGTAATT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAGAGACTTTCTCAGATaGTTCAGCTTTCACTTTACT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLRDFLR*FSFHFT
Trigger: AGTAAAGTGAAAGCTGAACCATCTGAGAAAGTCTCT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCTACAATCCCAACTATaGAGTCAGGCTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHLQSQL*SQAVSQ
Trigger: CTGTGACACAGCCTGACTCCATAGTTGGGATTGTAG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAATGGTTGGAAGGCTTaGAGCTCCACTGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHNGWKA*SSTGVV
Trigger: AACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGATGAATCACTCTTCCTaGATCCCAAAATTCACCGTT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRMNHSS*IPKFTV
Trigger: AACGGTGAATTTTGGGATCCAGGAAGAGTGATTCAT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGGACACTGAAGCATCTTaGGTATTTGAAACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVDTEAS*VFETLK
Trigger: CTTTAAAGTTTCAAATACCCAAGATGCTTCAGTGTC...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGAGAGGTAAGATATGCTaGTGTTTTACTAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRRGKIC*CFTKVP
Trigger: GGGAACCTTAGTAAAACACCAGCATATCTTACCTCT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTGTCCTAGAATTGTTTaGCTACTAGGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRCPRIV*LLGFPN
Trigger: GTTGGGAAAACCTAGTAGCCAAACAATTCTAGGACA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACACCAATTCAATACACTaGGCAAACGTGGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHTNSIH*ANVVNL
Trigger: AAGATTTACCACGTTTGCCCAGTGTATTGAATTGGT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTCTACAAATGGAACATaGAACTACCTTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRSTNGT*NYLLPP
Trigger: TGGTGGTAGAAGGTAGTTCCATGTTCCATTTGTAGA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTTTTACTTAATGTCTTaGGTCTGCCAGACATGTCAA +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRFYLMS*VCQTCQ
Trigger: TTGACATGTCTGGCAGACTCAAGACATTAAGTAAAA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCCCAAGCTATTTCTTTaGCTGCTTAGCCACCTCATA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHPKLFL*LLSHLI
Trigger: TATGAGGTGGCTAAGCAGGCAAAGAAATAGCTTGGG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGGTATCCTGAGTAGATaGAAAACCACCCAAGCTATT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMGILSR*KTTQAI
Trigger: AATAGCTTGGGTGGTTTTGCATCTACTCAGGATACC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAATCCAAAACCATTTaGGGAAATATTAACTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKSKTI*GNINCR
Trigger: ACGGCAGTTAATATTTCCGCAAATGGTTTTGGATTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHPVTVT*IFVLSV
Trigger: TACAGAAAGGACAAATATCCAAGTGACCGTGACGGG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAATATTAACTGCCGTTaGCTGTACCACAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHNINCR*LYHSKL
Trigger: GAGCTTGCTGTGGTACAGCCAACGGCAGTTAATATT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCCTCAACCTCTGAGATaGTGTGAAAAGCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMPQPLR*CEKHSK
Trigger: TTTACTGTGCTTTTCACACCATCTCAGAGGTTGAGG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTTTAGTAATCTGAAATaGGCGCGCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHFSNLK*ARLTAE
Trigger: CTCTGCTGTTAGGCGCGCCCATTTCAGATTACTAAA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAATATTAACTGCCGTTaGCTGTACCACAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHNINCR*LYHSKR
Trigger: CCTCTTGCTGTGGTACAGCCAACGGCAGTTAATATT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGTAAGGCTTAAAATCTaGGAAGAGTGTAACAATGCG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMVRLKI*EECNNA
Trigger: CGCATTGTTACACTCTTCTCAGATTTTAAGCCTTAC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTGCTATCTACAATTCTaGATATTTCCACGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMCYLQF*IFPRAG
Trigger: TCCTGCACGTGGAAATATTCAGAATTGTAGATAGCA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGAGACAGATATTCTCTTaGTCTCAAATGATAAGCGGG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMRQIFS*SQMISG
Trigger: CCCGCTTATCATTTGAGACCAAGAGAATATCTGTCT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACATTCTTTGGAGCCCATaGCAATTACTTTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHILWSP*QLLFPL
Trigger: CAGGGGAAAAAGTAATTGCCATGGGCTCCAAAGAAT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGATAAAGCAAATTCTTTaGAGCCCATGGCAATTACTT +
Preference number: 4 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRIKQIL*SPWQLL
Trigger: AAGTAATTGCCATGGGCTCCAAAGAATTTGCTTTAT...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGCCCATGGTAACCACTTaGCAGACTCAAATAATAACT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMPMVTT*QTQIIT
Trigger: AGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGG...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGGACTTAAACAGACTATaGACTGCCATGCTACTTTTA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMDLNRL*TAMLLL
Trigger: TAAAAGTAGCATGGCAGTTCATAGTCTGTTTAAGTC...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGACTATGAACTGCCATaGTACTTTTACTACCAAGGA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHDYELP*YFYYQG
Trigger: TCCTTGGTAGTAAAAGTAGCATGGCAGTTCATAGTC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR GCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTATTTGATACTTAACTaGCCTCTTCATAGACCACTG +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMYLILN*PLHRPL
Trigger: CAGTGGTCTATGAAGAGGGCAGTTAAGTATCAAATA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTTTACTAAAATCATCTaGGTGACAGCATCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMFTKII*VTASEA
Trigger: TGCTTCTGATGCTGTCACCCAGATGATTTTAGTAAA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CCA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGACCAATTCAATACACTaGGCAAACGTGGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMTNSIH*ANVVNL
Trigger: AAGATTTACCACGTTTGCCCAGTGTATTGAATTGGT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGACTTAAACAGACTATaGACTGCCATGCTACTTTTA +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHDLNRL*TAMLLL
Trigger: TAAAAGTAGCATGGCAGTTCATAGTCTGTTTAAGTC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR TCA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGAACGTAAAAGGTTCTaGAACTCATCTATGAATGAG +
Preference number: 4 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHERKRF*NSSMNE
Trigger: CTCATTCATAGATGAGTTTCAGAACCTTTTACGTTC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp GCAGTTGCTAAACGCAGGCGGCCCCACCTGGCCCGGCGTCCCAGCTaGCCGCGGAGAACAGAGCGCGCCCACTTCCCCGGCCCACCGGGT +
Preference number: 5 (lower is better)
Translates to: AVAKRRRPHLARRPS*PRRTERAHFPGPPG
Trigger: ACCCGGTGGGCCGGGGAAGTGGGCGCGCTCTGTTCTCCGCGGCCAGCTGGGACGCCGGGCCAGGTGGGGCCGCCTGCGTTTAGCAACTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 90 bp GTGGGCGGCGGTCAGGAGCGGTGGGCCCTGCATCTCGACGGCGTCTaGCTGGGCTACAGTCCGCTGCCGGGGAAGTTCGCGGGCACCGTG +
Preference number: 5 (lower is better)
Translates to: VGGGQERWALHLDGV*LGYSPLPGKFAGTV
Trigger: CACGGTGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp GCGGCGGTCAGGAGCGGTGGGCCCTGCATCTCGACGGCGTCTGCCTaGGCTACAGTCCGCTGCCGGGGAAGTTCGCGGGCACCGTGGGGT +
Preference number: 5 (lower is better)
Translates to: AAVRSGGPCISTASA*ATVRCRGSSRAPWG
Trigger: ACCCCACGGTGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp CGCGGCGGTGCACACGCAGAGGAGGTGGGCGGCGGTCAGGAGCGGTaGGCCCTGCATCTCGACGGCGTCTGCCTGGGCTACAGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: RGGAHAEEVGGGQER*ALHLDGVCLGYSPL
Trigger: CAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGCCCACCTCCTCTGCGTGTGCACCGCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 90 bp GTGCACACGCAGAGGAGGTGGGCGGCGGTCAGGAGCGGTGGGCCCTaGATCTCGACGGCGTCTGCCTGGGCTACAGTCCGCTGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: VHTQRRWAAVRSGGP*ISTASAWATVRCRG
Trigger: TCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGCCCACCTCCTCTGCGTGTGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 90 bp GGTGGGCCCTGCATCTCGACGGCGTCTGCCTGGGCTACAGTCCGCTaGCGGGGAAGTTCGCGGGCACCGTGGGGTGTGGCTTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: GGPCISTASAWATVR*RGSSRAPWGVACHL
Trigger: GAGGTGGCAAGCCACACCCCACGGTGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp AAGCTCCACCCCAATAGTCACATTTCCTCCGGGCCTGATGATCCCTaGGGCTGTCACCAGAAACCGAGGCCCGGGAGCCACGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: KLHPNSHISSGPDDP*GCHQKPRPGSHGQR
Trigger: GCGCTGGCCGTGGCTCCCGGGCCTCGGTTTCTGGTGACAGCCCCAGGGATCATCAGGCCCGGAGGAAATGTGACTATTGGGGTGGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp TCCAGCCTCCTCTTTCCGGGCTGTGGCAAACCTGGAGCCTCCTTTTaGAGACGTGGACACGTTGGCAGCTGCAGAGCCCCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: SSLLFPGCGKPGASF*RRGHVGSCRAPCKC
Trigger: GCACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCGGAAAGAGGAGGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 90 bp CAGTGCTATAGACTCCAGCCTCCTCTTTCCGGGCTGTGGCAAACCTaGAGCCTCCTTTTGGAGACGTGGACACGTTGGCAGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QCYRLQPPLSGLWQT*SLLLETWTRWQLQS
Trigger: GCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCGGAAAGAGGAGGCTGGAGTCTATAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGGCAGTAGGGCTAGGTaGGAGGTGGGAAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLGSRAR*EVGREQ
Trigger: CTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAAATTGAGACAGGACTaGGAGGCTCCACCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDKLRQD*EAPPLP
Trigger: TGGGAGGGGTGGAGCCTCCAAGTCCTGTCTCAATTT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTATCACCGCCTGTCTCCTaGGCTCATAGTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLSPPVS*AHSNPL
Trigger: TAGTGGATTACTATGAGCCAAGGAGACAGGCGGTGA...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCCATGAAGCACATATaGCAGTGCTCTCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPMKHI*QCSLTL
Trigger: GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAATACATCATGGCACCTaGCCCCATGGTAACCACTTG +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLIHHGT*PHGNHL
Trigger: CAAGTGGTTACCATGGGGCAAGGTGCCATGATGTAT...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS GCA 90 bp AGGAATTTCTCCCAGATGTGTTGGCCTGATGGGAAAAAGAACAGTTaGCCCATCCTCACTGGGAACCAGAAGGGTCTGCTGGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: RNFSQMCWPDGKKNS*PILTGNQKGLLVAC
Trigger: ACAGGCCACCAGCAGACCCTTCTGGTTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCCATCAGGCCAACACATCTGGGAGAAATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS GCA 90 bp AGCCTGAAGCTCCATCCTCACAAGGACGGCAGCCCTGGACATCACTaGAAAGGTCACAGGAGGACAGCTTCACTTCAGAGTTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: SLKLHPHKDGSPGHH*KGHRRTASLQSCNF
Trigger: GAAGTTACAACTCTGAAGTGAAGCTGTCCTCCTGTGACCTTTGCAGTGATGTCCAGGGCTGCCGTCCTTGTGAGGATGGAGCTTCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTCAAGAGTCAGTTGGTaGCCATCAGCACGAGTTACC +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDSRVSW*PSARVT
Trigger: GGTAACTCGTGCTGATGGCAACCAACTGACTCTTGA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATGGCAGTAGGGCTAGGTaGGAGGTGGGAAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHGSRAR*EVGREQ
Trigger: CTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCC...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCCCATGAAGCACATATaGCAGTGCTCTCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDPMKHI*QCSLTL
Trigger: GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATACATCATGGCACCTaGCCCCATGGTAACCACTTG +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDIHHGT*PHGNHL
Trigger: CAAGTGGTTACCATGGGGCAAGGTGCCATGATGTAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTATCCTTCAATCGTTTGTaGCCACTAACCACCAACTCA +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLSFNRL*PLTTNS
Trigger: TGAGTTGGTGGTTAGTGGCAACAAACGATTGAAGGA...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTACCCCATGGTAACCACTaGGCAGACTCAAATAATAAC +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLPHGNH*ADSNNN
Trigger: GTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGG...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CCGGGACATCTGCACAGCCCCATGCACCAGGAGACAGTGCTAGCTAACCCTTTAGTCATTCACTTGAACTaGAATAGACCAGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: PGHLHSPMHQETVLANPLVIHLN*NRPVTK
Trigger: CTTGGTGACTGGTCTATTCAAGTTCAAGTGAATGAC...TAAAGGGTTAGCTAGCACTGTCTCCTGGTGCATGGGGCTGTGCAGATGTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTGGAGGGGAAAGTCCTTaGCCAAGACCCTCCCCCAAT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVGGESP*PRPSPN
Trigger: ATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTCC...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCCCCATGGTAACCACTaGGCAGACTCAAATAATAAC +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDPHGNH*ADSNNN
Trigger: GTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS TCA 90 bp GCCCCCTGCAAGTGCTCCCAGAAGGGTCATAATTCCCAAAAGCACTaGAAGAGCCATCTTCCCTCTGATAGAGAAGTTCTCTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: APCKCSQKGHNSQKH*KSHLPSDREVLSGN
Trigger: GTTACCAGAGAGAACTTCTCTATCAGAGGGAAGATGGCTCTTTCAGTGCTTTTGGGAATTATGACCCTTCTGGGAGCACTTGCAGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 90 bp CAACTTCAATATCCAGGGAGCGTGGCTGCCAGGAGTCAGAAAGTTTaGACTCTGATGACACCCAGAATTGCATGCCACCTTCTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: QLQYPGSVAARSQKV*TLMTPRIACHLLVL
Trigger: CAGAACAAGAAGGTGGCATGCAATTCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTGGCAGCCACGCTCCCTGGATATTGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACTTACCTAGTATTTTGTaGTATCCCTGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDLPSIL*YPWLTV
Trigger: CACTGTGAGCCAGGGATACAACAAAATACTAGGTAA...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp ACCACAGCAAGAGGACTTGGTGAGCTAGGCCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTATTCATTAGGGCTGCAAATTCAGAC +
Preference number: 5 (lower is better)
Translates to: TTARGLGELGPVTVT*IFVLSVFIRAANSD
Trigger: GTCTGAATTTGCAGCCCTAATGAATACAGAAAGGACAAATATCCAAGTGACCGTGACGGGGCCTAGCTCACCAAGTCCTCTTGCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAGGTTTGATGCTGTCTaGAGCAGCTCCGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRFDAV*SSSAFT
Trigger: TGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACCT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAGGTTTGATGCTGTCTaGAGCAGCTCCGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLRFDAV*SSSAFT
Trigger: TGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACCT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGAGGTTTGATGCTGTCTaGAGCAGCTCCGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVRFDAV*SSSAFT
Trigger: TGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACCT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTCAAGAGTCAGTTGGTaGCCATCAGCACGAGTTACC +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPSRVSW*PSARVT
Trigger: GGTAACTCGTGCTGATGGCAACCAACTGACTCTTGA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCAATTACACAGGCTTTaGGAGTCCAAGAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDQLHRL*ESKNFL
Trigger: CAGAAAATTCTTGGACTCCAAAAGCCTGTGTAATTG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACATCAGATTCACACTTTaGTCAACAGCTACAATCCCA +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDIRFTL*STATIP
Trigger: TGGGATTGTAGCTGTTGACAAAAGTGTGAATCTGAT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAAATGGTTGGAAGGCTaGGAGCTCCACTGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPKWLEG*ELHWSS
Trigger: ACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATTT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTGGGAAAAAGAACAGTaGCCCCATCCTCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPWEKEQ*PHPHWE
Trigger: TTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCCA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACAAAATGGATAGACTCTaGCACATCAATGTTAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDKMDRL*HINVRL
Trigger: CAGCCTAACATTGATGTGCAAGAGTCTATCCATTTT...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCAGGAGTCAGAAAGTTaGGACTCTGATGACACCCAG +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPQESES*DSDDTQ
Trigger: CTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCCCCGTCACGGTCACTaGGATATTTGTCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPPRHGH*DICPFC
Trigger: ACAGAAAGGACAAATATCCAAGTGACCGTGACGGGG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTCCGGGCCCGAAAAGCTaGTACACACATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPPGPKS*YTHSNP
Trigger: TGGATTTGAATGTGTGTACAAGCTTTTCGGGCCCGG...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCCGGGCCCGAAAAGCTaGTACACACATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHPGPKS*YTHSNP
Trigger: TGGATTTGAATGTGTGTACAAGCTTTTCGGGCCCGG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTCACCGCCTGTCTCCTaGGCTCATAGTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHSPPVS*AHSNPL
Trigger: TAGTGGATTACTATGAGCCAAGGAGACAGGCGGTGA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGGAGGGGAAAGTCCTTaGCCAAGACCCTCCCCCAAT +
Preference number: 5 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRGGESP*PRPSPN
Trigger: ATTGGGGGAGGGTCTTGGCAAAGGACTTTCCCCTCC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAAATTGAGACAGGACTaGGAGGCTCCACCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHKLRQD*EAPPLP
Trigger: TGGGAGGGGTGGAGCCTCCAAGTCCTGTCTCAATTT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTTCTTCAAGAGTCAGTaGGTTGCCATCAGCACGAGT +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHFFKSQ*VAISTS
Trigger: ACTCGTGCTGATGGCAACCAACTGACTCTTGAAGAA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTGGGAAAAAGAACAGTaGCCCCATCCTCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLWEKEQ*PHPHWE
Trigger: TTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCCA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCAGGAGTCAGAAAGTTaGGACTCTGATGACACCCAG +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLQESES*DSDDTQ
Trigger: CTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTCCACAAACCCAGCTTCTTTCCCAAACTGCAGGGAGGTCGGTCTGCAGTGACCGGTCACTTGGATATTaGTCCTTTCTGTATTCATTA +
Preference number: 5 (lower is better)
Translates to: SPQTQLLSQTAGRSVCSDRSLGY*SFLYSL
Trigger: TAATGAATACAGAAAGGACAAATATCCAAGTGACCG...GTCACTGCAGACCGACCTCCCTGCAGTTTGGGAAAGAAGCTGGGTTTGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCCCCGTCACGGTCACTaGGATATTTGTCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVPRHGH*DICPFC
Trigger: ACAGAAAGGACAAATATCCAAGTGACCGTGACGGGG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCCCGGGCCCGAAAAGCTaGTACACACATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLPGPKS*YTHSNP
Trigger: TGGATTTGAATGTGTGTACAAGCTTTTCGGGCCCGG...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCCCATGAAGCACATATaGCAGTGCTCTCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVPMKHI*QCSLTL
Trigger: GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS TCA 90 bp CTGACAACCAAGTGCTCCCAGAAGGGTCATAATTCCCAAAAGCACTaGAAGAGCCATCTTCCCTCTGATAGAGAAGTTCTCTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: LTTKCSQKGHNSQKH*KSHLPSDREVLSGN
Trigger: GTTACCAGAGAGAACTTCTCTATCAGAGGGAAGATGGCTCTTTCAGTGCTTTTGGGAATTATGACCCTTCTGGGAGCACTTGGTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTTCTTCAAGAGTCAGTaGGTTGCCATCAGCACGAGT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVFFKSQ*VAISTS
Trigger: ACTCGTGCTGATGGCAACCAACTGACTCTTGAAGAA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTCCTTCAATCGTTTGTaGCCACTAACCACCAACTCA +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPSFNRL*PLTTNS
Trigger: TGAGTTGGTGGTTAGTGGCAACAAACGATTGAAGGA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAATGGTTGGAAGGCTaGGAGCTCCACTGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKWLEG*ELHWSS
Trigger: ACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGGCAGTAGGGCTAGGTaGGAGGTGGGAAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHGSRAR*EVGREQ
Trigger: CTGTTCCCTTCCCACCTCCAACCTAGCCCTACTGCC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAATACATCATGGCACCTaGCCCCATGGTAACCACTTG +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLIHHGT*PHGNHL
Trigger: CAAGTGGTTACCATGGGGCAAGGTGCCATGATGTAT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 90 bp AGAAACTTTACAGGACTTGGTGAGCTAGGCCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTATTCATTAGGGCTGCAAATTCAGAC +
Preference number: 5 (lower is better)
Translates to: RNFTGLGELGPVTVT*IFVLSVFIRAANSD
Trigger: GTCTGAATTTGCAGCCCTAATGAATACAGAAAGGACAAATATCCAAGTGACCGTGACGGGGCCTAGCTCACCAAGTCCTGTAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTACTTCACTTCTTGCTTaGGCTTGTATAAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPTSLLA*ACIRPC
Trigger: ACAAGGCCTTATACAAGCCAAAGCAAGAAGTGAAGT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACCAGTCACCAAGTATaGGATGGGAAGATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTSHQV*DGKIAE
Trigger: TTCAGCTATCTTCCCATCCAATACTTGGTGACTGGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGACCAGTCACCAAGTATaGGATGGGAAGATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVTSHQV*DGKIAE
Trigger: TTCAGCTATCTTCCCATCCAATACTTGGTGACTGGT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTGTCTGGTCATTCACTaGAACTTGAATAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPCLVIH*NLNRPV
Trigger: GACTGGTCTATTCAAGTTCAAGTGAATGACCAGACA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCTCCTTCAATCGTTTGTaGCCACTAACCACCAACTCA +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLSFNRL*PLTTNS
Trigger: TGAGTTGGTGGTTAGTGGCAACAAACGATTGAAGGA...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAACTCCTTCAATCGTTaGTTGCCACTAACCACCAAC +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVNSFNR*LPLTTN
Trigger: GTTGGTGGTTAGTGGCAACAAACGATTGAAGGAGTT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGATCTTCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCAATGAGGCTAAGCCATaGATGGAAGGACCAAGAACA +
Preference number: 5 (lower is better)
Translates to: GSSNRNPMKHILQCSLTLNEAKP*MEGPRT
Trigger: TGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCATT...GAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGAAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGTCACCGCCTGTCTCCTaGGCTCATAGTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRSPPVS*AHSNPL
Trigger: TAGTGGATTACTATGAGCCAAGGAGACAGGCGGTGA...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTTTACCTAGTATTTTGTaGTATCCCTGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPLPSIL*YPWLTV
Trigger: CACTGTGAGCCAGGGATACAACAAAATACTAGGTAA...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAGTGAGAGATCTAAATaGAGACAGGACTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVSERSK*RQDLEA
Trigger: AGCCTCCAAGTCCTGTCTCAATTTAGATCTCTCACT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCGAATCGAAATCCCATGAAGCACATATTGCAGTGCTCTCTGACTCTCACCCCTAAGACAGATATTCTCTaGGTCTCAAATGATAAGCGG +
Preference number: 5 (lower is better)
Translates to: SNRNPMKHILQCSLTLTPKTDIL*VSNDKR
Trigger: CCGCTTATCATTTGAGACCAAGAGAATATCTGTCTT...AGGGGTGAGAGTCAGAGAGCACTGCAATATGTGCTTCATGGGATTTCGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACTTCTTGCTTTGGCTaGTATAAGGCCTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTSCFG*YKALSV
Trigger: AACAGACAAGGCCTTATACAAGCCAAAGCAAGAAGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAACCAGTCACCAAGTATaGGATGGGAAGATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLTSHQV*DGKIAE
Trigger: TTCAGCTATCTTCCCATCCAATACTTGGTGACTGGT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTGTCTGGTCATTCACTaGAACTTGAATAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVCLVIH*NLNRPV
Trigger: GACTGGTCTATTCAAGTTCAAGTGAATGACCAGACA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAATGAGGCTAAGCCATaGATGGAAGGACCAAGAACA +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLNEAKP*MEGPRT
Trigger: TGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCATT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACAATGAGGCTAAGCCATaGATGGAAGGACCAAGAACA +
Preference number: 5 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHNEAKP*MEGPRT
Trigger: TGTTCTTGGTCCTTCCATCAATGGCTTAGCCTCATT...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATTGGATCAAATTTGATTaGGGGTCTGATGGAAGAGTA +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHWIKFD*GSDGRV
Trigger: TACTCTTCCATCAGACCCCAAATCAAATTTGATCCA...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422508.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAAGACAGATATTCTCTaGGTCTCAAATGATAAGCGG +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVKTDIL*VSNDKR
Trigger: CCGCTTATCATTTGAGACCAAGAGAATATCTGTCTT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTATGTCTGGTCATTCACTaGAACTTGAATAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLCLVIH*NLNRPV
Trigger: GACTGGTCTATTCAAGTTCAAGTGAATGACCAGACA...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGCAATTACACAGGCTTTaGGAGTCCAAGAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVQLHRL*ESKNFL
Trigger: CAGAAAATTCTTGGACTCCAAAAGCCTGTGTAATTG...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAGGAGGCCCCAACATTACAAGTGCCTGTTTTAGAACAGATTGTGTCAGAGGTGATCAGATTCACACTTTaGTCAACAGCTACAATCCCA +
Preference number: 5 (lower is better)
Translates to: KEAPTLQVPVLEQIVSEVIRFTL*STATIP
Trigger: TGGGATTGTAGCTGTTGACAAAAGTGTGAATCTGAT...CACCTCTGACACAATCTGTTCTAAAACAGGCACTTGTAATGTTGGGGCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTGGGAAAAAGAACAGTaGCCCCATCCTCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMWEKEQ*PHPHWE
Trigger: TTCCCAGTGAGGATGGGGCAACTGTTCTTTTTCCCA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp GGCACCTTGCCCCATGGTAACCACTTGGCAGACTCAAATAATAACTACCCTCATCGGTCACTTGGATATTaGTCCTTTCTGTATTCATTA +
Preference number: 5 (lower is better)
Translates to: GTLPHGNHLADSNNNYPHRSLGY*SFLYSL
Trigger: TAATGAATACAGAAAGGACAAATATCCAAGTGACCG...ATGAGGGTAGTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGGCAAGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCATAAAGCAAATTCTTaGGAGCCCATGGCAATTACT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVHKANS*EPMAIT
Trigger: AGTAATTGCCATGGGCTCCAAAGAATTTGCTTTATG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTACTGTTGGATCAAATTaGATTTGGGGTCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVTVGSN*IWGLME
Trigger: TTCCATCAGACCCCAAATCAAATTTGATCCAACAGT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422508.6
CDS CCA 90 bp TGGACTTTTATTGCCACCTTGAAGCTCACTATGAATCACTCTTCCTaGATCCCAAAATTCACCGTTGGATTTCTGATGTCCTTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: WTFIATLKLTMNHSS*IPKFTVGFLMSFKP
Trigger: TGGCTTAAAGGACATCAGAAATCCAACGGTGAATTTTGGGATCCAGGAAGAGTGATTCATAGTGAGCTTCAAGGTGGCAATAAAAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTGGATCAAATTTGATTaGGGGTCCTTAATGAGAATG +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVWIKFD*GSLMRM
Trigger: CATTCTCATTAAGGACCCCAAATCAAATTTGATCCA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AGAGGTAAGATATGCTGGTGTTTTACTAAGGTTCCCAGTGAGTGGAAAAGAAGGGTCATTCACTTGAACTaGAATAGACCAGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: RGKICWCFTKVPSEWKRRVIHLN*NRPVTK
Trigger: CTTGGTGACTGGTCTATTCAAGTTCAAGTGAATGAC...CCTTCTTTTCCACTCACTGGGAACCTTAGTAAAACACCAGCATATCTTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGTTCTTCAAGAGTCAGTaGGTTGCCATCAGCACGAGT +
Preference number: 5 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMFFKSQ*VAISTS
Trigger: ACTCGTGCTGATGGCAACCAACTGACTCTTGAAGAA...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAAATGGTTGGAAGGCTaGGAGCTCCACTGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHKWLEG*ELHWSS
Trigger: ACTACTCCAGTGGAGCTCCAAGCCTTCCAACCATTT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAGTACTCTGTAGCCTATaGTCAGTCAAGTCTAATAAG +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLVLCSL*SVKSNK
Trigger: CTTATTAGACTTGACTGACAATAGGCTACAGAGTAC...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp TCTGGAAGCATCGGCCAGTCAGAAAGAGAGGTAAGATATGCTGGTGTTTTACTAAAAATGGATAGACTCTaGCACATCAATGTTAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGSIGQSEREVRYAGVLLKMDRL*HINVRL
Trigger: CAGCCTAACATTGATGTGCAAGAGTCTATCCATTTT...TAGTAAAACACCAGCATATCTTACCTCTCTTTCTGACTGGCCGATGCTTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTCGGTCACTTGGATATTaGTCCTTTCTGTATTCATTA +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVRSLGY*SFLYSL
Trigger: TAATGAATACAGAAAGGACAAATATCCAAGTGACCG...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCCCCGTCACGGTCACTaGGATATTTGTCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHPRHGH*DICPFC
Trigger: ACAGAAAGGACAAATATCCAAGTGACCGTGACGGGG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTAAAGGCTTCTTGATTTaGGATAGATCTTCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVKGFLI*DRSSSS
Trigger: AGAAGACGAAGATCTATCCAAAATCAAGAAGCCTTT...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp ATGTCACTAGACAACTGGCAGTCTAATGCTCACACCCCTGAACTAGAAGAGGTTTTTTTACTTAATGTCTaGAGTCTGCCAGACATGTCA +
Preference number: 5 (lower is better)
Translates to: MSLDNWQSNAHTPELEEVFLLNV*SLPDMS
Trigger: TGACATGTCTGGCAGACTCAAGACATTAAGTAAAAA...AACCTCTTCTAGTTCAGGGGTGTGAGCATTAGACTGCCAGTTGTCTAGTGACAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACTGGATCAAATTTGATTaGGGGTCCTTAATGAGAATG +
Preference number: 5 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHWIKFD*GSLMRM
Trigger: CATTCTCATTAAGGACCCCAAATCAAATTTGATCCA...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp AAAGTTCACAGCAAGCATCAGATGTCACTAGACAACTGGCAGTCTAATGCTCACTTTTTACTTAATGTCTaGAGTCTGCCAGACATGTCA +
Preference number: 5 (lower is better)
Translates to: KVHSKHQMSLDNWQSNAHFLLNV*SLPDMS
Trigger: TGACATGTCTGGCAGACTCAAGACATTAAGTAAAAA...GTGAGCATTAGACTGCCAGTTGTCTAGTGACATCTGATGCTTGCTGTGAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS TCA 90 bp CAGCATATTCTGCATTGTCATAAACACCATCAATATAATCCTTCGTaGGGTTTGCATCTGTCAATACCCAGAGTCCACATTCCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: QHILHCHKHHQYNPS*GLHLSIPRVHIPER
Trigger: TCTTTCAGGAATGTGGACTCTGGGTATTGACAGATGCAAACCTCACGAAGGATTATATTGATGGTGTTTATGACAATGCAGAATATGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS GCA 90 bp TTCTGCATTGTCATAAACACCATCAATATAATCCTTCGTGAGGTTTaGATCTGTCAATACCCAGAGTCCACATTCCTGAAAGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: FCIVINTINIILREV*ICQYPESTFLKDCK
Trigger: TTTGCAGTCTTTCAGGAATGTGGACTCTGGGTATTGACAGATGCAAACCTCACGAAGGATTATATTGATGGTGTTTATGACAATGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS GCA 90 bp CTAGCCAAATCCAAGTCTCTGGAAAATGCTTTCGGACATGTGGACTaGTACCCAAAGAAAAGTCATGAATATCTACAATATGTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LAKSKSLENAFGHVD*YPKKSHEYLQYVLH
Trigger: ATGAAGGACATATTGTAGATATTCATGACTTTTCTTTGGGTAGCAGTCCACATGTCCGAAAGCATTTTCCAGAGACTTGGATTTGGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CCA 90 bp TCTATATCCCAGGAGAGAAGTTACAATATAGGCTGTAAGTGTTACTaGACTTTTATTGCCACCTTGAAGCTCACTATGAATCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SISQERSYNIGCKCY*TFIATLKLTMNHSS
Trigger: GGAAGAGTGATTCATAGTGAGCTTCAAGGTGGCAATAAAAGTCCAGTAACACTTACAGCCTATATTGTAACTTCTCTCCTGGGATATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAACTCCTTCAATCGTTaGTTGCCACTAACCACCAAC +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHNSFNR*LPLTTN
Trigger: GTTGGTGGTTAGTGGCAACAAACGATTGAAGGAGTT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACCCCCATGGTAACCACTaGGCAGACTCAAATAATAAC +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHPHGNH*ADSNNN
Trigger: GTTATTATTTGAGTCTGCCAAGTGGTTACCATGGGG...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAGTGAGAGATCTAAATaGAGACAGGACTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHSERSK*RQDLEA
Trigger: AGCCTCCAAGTCCTGTCTCAATTTAGATCTCTCACT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS TCA 90 bp ACTTCACTTCTTGCTTTGGCTTGTATAAGGCCTTGTCTGTTTGAATaGAGACAGATATTCTCTTGGTCTCAAATGATAAGCGGGTACTAT +
Preference number: 5 (lower is better)
Translates to: TSLLALACIRPCLFE*RQIFSWSQMISGYY
Trigger: ATAGTACCCGCTTATCATTTGAGACCAAGAGAATATCTGTCTTCATTCAAACAGACAAGGCCTTATACAAGCCAAAGCAAGAAGTGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 90 bp AGTCACCAAGTATTGGATGGGAAGATAGCTGAAAAGTTTTGGAAATaGCTCCAAGATCACTTTGTTGTGACAACCACTGTTGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: SHQVLDGKIAEKFWK*LQDHFVVTTTVGSN
Trigger: ATTTGATCCAACAGTGGTTGTCACAACAAAGTGATCTTGGAGTCATTTCCAAAACTTTTCAGCTATCTTCCCATCCAATACTTGGTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACACTTCTTGCTTTGGCTaGTATAAGGCCTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHTSCFG*YKALSV
Trigger: AACAGACAAGGCCTTATACAAGCCAAAGCAAGAAGT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CACAACTGCATTCATTCTGATCTTCCACACAAAGATCAGGTGAAGAAATCTATGATCAGATTCACACTTTaGTCAACAGCTACAATCCCA +
Preference number: 5 (lower is better)
Translates to: HNCIHSDLPHKDQVKKSMIRFTL*STATIP
Trigger: TGGGATTGTAGCTGTTGACAAAAGTGTGAATCTGAT...CATAGATTTCTTCACCTGATCTTTGTGTGGAAGATCAGAATGAATGCAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTTACCTAGTATTTTGTaGTATCCCTGGCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHLPSIL*YPWLTV
Trigger: CACTGTGAGCCAGGGATACAACAAAATACTAGGTAA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACGTACTCTGTAGCCTATaGTCAGTCAAGTCTAATAAG +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHVLCSL*SVKSNK
Trigger: CTTATTAGACTTGACTGACAATAGGCTACAGAGTAC...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACAAAGGCTTCTTGATTTaGGATAGATCTTCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHKGFLI*DRSSSS
Trigger: AGAAGACGAAGATCTATCCAAAATCAAGAAGCCTTT...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS-3UTR CAA 90 bp CAAAAGAATAGGAGCAGGGAGAGTTATGCTATCTACAATTCTGAATATTTCCACTTTTTACTTAATGTCTaGAGTCTGCCAGACATGTCA +
Preference number: 5 (lower is better)
Translates to: QKNRSRESYAIYNSEYFHFLLNV*SLPDMS
Trigger: TGACATGTCTGGCAGACTCAAGACATTAAGTAAAAA...GTGGAAATATTCAGAATTGTAGATAGCATAACTCTCCCTGCTCCTATTCTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 72 bp AAACGCAGGCGGCCCCACCTGGCCCGGCGTCCCAGCTaGCCGCGGAGAACAGAGCGCGCCCACTTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: KRRRPHLARRPS*PRRTERAHFPG
Trigger: GCCGGGGAAGTGGGCGCGCTCTGTTCTCCGCGGCCAGCTGGGACGCCGGGCCAGGTGGGGCCGCCTGCGTTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 72 bp CAGAGGAGGTGGGCGGCGGTCAGGAGCGGTGGGCCCTaGATCTCGACGGCGTCTGCCTGGGCTACAGTCCGC +
Preference number: 6 (lower is better)
Translates to: QRRWAAVRSGGP*ISTASAWATVR
Trigger: GCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGCCCACCTCCTCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 72 bp GCACACGCAGAGGAGGTGGGCGGCGGTCAGGAGCGGTaGGCCCTGCATCTCGACGGCGTCTGCCTGGGCTAC +
Preference number: 6 (lower is better)
Translates to: AHAEEVGGGQER*ALHLDGVCLGY
Trigger: GTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACCGCCGCCCACCTCCTCTGCGTGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 72 bp GGTCAGGAGCGGTGGGCCCTGCATCTCGACGGCGTCTaGCTGGGCTACAGTCCGCTGCCGGGGAAGTTCGCG +
Preference number: 6 (lower is better)
Translates to: GQERWALHLDGV*LGYSPLPGKFA
Trigger: CGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 72 bp AGGAGCGGTGGGCCCTGCATCTCGACGGCGTCTGCCTaGGCTACAGTCCGCTGCCGGGGAAGTTCGCGGGCA +
Preference number: 6 (lower is better)
Translates to: RSGGPCISTASA*ATVRCRGSSRA
Trigger: TGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCAGGGCCCACCGCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS GCA 72 bp TGCATCTCGACGGCGTCTGCCTGGGCTACAGTCCGCTaGCGGGGAAGTTCGCGGGCACCGTGGGGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: CISTASAWATVR*RGSSRAPWGVA
Trigger: AGCCACACCCCACGGTGCCCGCGAACTTCCCCGGCAGCGGACTGTAGCCCAGGCAGACGCCGTCGAGATGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CAA 90 bp CTCCAGCCTCCTCTTTCCGGGCTGTGGCAAACCTGGAGCCTCCTTTaGGAGACGTGGACACGTTGGCAGCTGCAGAGCCCCCTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: LQPPLSGLWQTWSLL*ETWTRWQLQSPLQV
Trigger: CACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCGGAAAGAGGAGGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 72 bp CCCAATAGTCACATTTCCTCCGGGCCTGATGATCCCTaGGGCTGTCACCAGAAACCGAGGCCCGGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PNSHISSGPDDP*GCHQKPRPGSH
Trigger: GTGGCTCCCGGGCCTCGGTTTCTGGTGACAGCCCCAGGGATCATCAGGCCCGGAGGAAATGTGACTATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CAA 72 bp CCTCTTTCCGGGCTGTGGCAAACCTGGAGCCTCCTTTaGGAGACGTGGACACGTTGGCAGCTGCAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: PLSGLWQTWSLL*ETWTRWQLQSP
Trigger: GGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCGGAAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CAA 90 bp CGGGCTGTGGCAAACCTGGAGCCTCCTTTTGGAGACGTGGACACGTaGGCAGCTGCAGAGCCCCCTGCAAGTGCTCCCAGAAGGGTCATA +
Preference number: 6 (lower is better)
Translates to: RAVANLEPPFGDVDT*AAAEPPASAPRRVI
Trigger: TATGACCCTTCTGGGAGCACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS GCA 72 bp GGAGCCTCCTTTTGGAGACGTGGACACGTTGGCAGCTaGAGAGCCCCCTGCAAGTGCTCCCAGAAGGGTCAT +
Preference number: 6 (lower is better)
Translates to: GASFWRRGHVGS*RAPCKCSQKGH
Trigger: ATGACCCTTCTGGGAGCACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 72 bp CAAACCTGGAGCCTCCTTTTGGAGACGTGGACACGTTaGCAGCTGCAGAGCCCCCTGCAAGTGCTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: QTWSLLLETWTR*QLQSPLQVLPE
Trigger: TTCTGGGAGCACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 72 bp AGACTCCAGCCTCCTCTTTCCGGGCTGTGGCAAACCTaGAGCCTCCTTTTGGAGACGTGGACACGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: RLQPPLSGLWQT*SLLLETWTRWQ
Trigger: CTGCCAACGTGTCCACGTCTCCAAAAGGAGGCTCCAGGTTTGCCACAGCCCGGAAAGAGGAGGCTGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 72 bp GAGCCTGAAGCTCCATCCTCACAAGGACGGCAGCCCTaGACATCACTGCAAAGGTCACAGGAGGACAGCTTC +
Preference number: 6 (lower is better)
Translates to: EPEAPSSQGRQP*TSLQRSQEDSF
Trigger: GAAGCTGTCCTCCTGTGACCTTTGCAGTGATGTCCAGGGCTGCCGTCCTTGTGAGGATGGAGCTTCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS GCA 72 bp TGGAGACGTGGACACGTTGGCAGCTGCAGAGCCCCCTaGAAGTGCTCCCAGAAGGGTCATAATTCCCAAAAG +
Preference number: 6 (lower is better)
Translates to: WRRGHVGSCRAP*KCSQKGHNSQK
Trigger: CTTTTGGGAATTATGACCCTTCTGGGAGCACTTGCAGGGGGCTCTGCAGCTGCCAACGTGTCCACGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474094.1
CDS CCA 72 bp GACTTGGAGGCTCCACCCCTCCCATCCCCATTACAATaGCGCTTCTCGCTGCTGTGGCAAACATCGCAAATC +
Preference number: 6 (lower is better)
Translates to: DLEAPPLPSPLQ*RFSLLWQTSQI
Trigger: GATTTGCGATGTTTGCCACAGCAGCGAGAAGCGCCATTGTAATGGGGATGGGAGGGGTGGAGCCTCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CAA 72 bp GCTTCCAGGACAGAGACAGTGAGGTTTGATGCTGTCTaGAGCAGCTCCGCCTTCACAGTCACCTGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: ASRTETVRFDAV*SSSAFTVTCEG
Trigger: CCCTTCACAGGTGACTGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACCTCACTGTCTCTGTCCTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CAA 90 bp ACTCCTTCTGCTTCCAGGACAGAGACAGTGAGGTTTGATGCTGTCTaGAGCAGCTCCGCCTTCACAGTCACCTGTGAAGGGCAGTGTTCC +
Preference number: 6 (lower is better)
Translates to: TPSASRTETVRFDAV*SSSAFTVTCEGQCS
Trigger: GGAACACTGCCCTTCACAGGTGACTGTGAAGGCGGAGCTGCTCAAGACAGCATCAAACCTCACTGTCTCTGTCCTGGAAGCAGAAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
CDS CCA 72 bp TATCCAGGGAGCGTGGCTGCCAGGAGTCAGAAAGTTTaGACTCTGATGACACCCAGAATTGCATGCCACCTT +
Preference number: 6 (lower is better)
Translates to: YPGSVAARSQKV*TLMTPRIACHL
Trigger: AAGGTGGCATGCAATTCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTGGCAGCCACGCTCCCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 72 bp ATATCCAGGGAGCGTGGCTGCCAGGAGTCAGAAAGTTaGGACTCTGATGACACCCAGAATTGCATGCCACCT +
Preference number: 6 (lower is better)
Translates to: ISRERGCQESES*DSDDTQNCMPP
Trigger: AGGTGGCATGCAATTCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTGGCAGCCACGCTCCCTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 90 bp GCAACTTCAATATCCAGGGAGCGTGGCTGCCAGGAGTCAGAAAGTTaGGACTCTGATGACACCCAGAATTGCATGCCACCTTCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: ATSISRERGCQESES*DSDDTQNCMPPSCS
Trigger: AGAACAAGAAGGTGGCATGCAATTCTGGGTGTCATCAGAGTCCAAACTTTCTGACTCCTGGCAGCCACGCTCCCTGGATATTGAAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 72 bp CTGTTTACACTAGCGCTCTACCAACGATGCCCAGGGTaGGTAAACAGGCCCATCCTTGTGAGGAGAAATTCA +
Preference number: 6 (lower is better)
Translates to: LFTLALYQRCPG*VNRPILVRRNS
Trigger: TGAATTTCTCCTCACAAGGATGGGCCTGTTTACTCACCCTGGGCATCGTTGGTAGAGCGCTAGTGTAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422508.6
ENST00000437994.6
CDS CCA 72 bp ACAGGACTTGGTGAGCTAGGCCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTATTCATTAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TGLGELGPVTVT*IFVLSVFIRAA
Trigger: TGCAGCCCTAATGAATACAGAAAGGACAAATATCCAAGTGACCGTGACGGGGCCTAGCTCACCAAGTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS CCA 72 bp AGAGGACTTGGTGAGCTAGGCCCCGTCACGGTCACTTaGATATTTGTCCTTTCTGTATTCATTAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: RGLGELGPVTVT*IFVLSVFIRAA
Trigger: TGCAGCCCTAATGAATACAGAAAGGACAAATATCCAAGTGACCGTGACGGGGCCTAGCTCACCAAGTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437994.6
CDS TCA 72 bp GTTGTGTGTGTCAATCAGAAACTTTACAGGACTTGGTaGGCTAGGCCCCGTCACGGTCACTTGGATATTTGT +
Preference number: 6 (lower is better)
Translates to: VVCVNQKLYRTW*ARPRHGHLDIC
Trigger: ACAAATATCCAAGTGACCGTGACGGGGCCTAGCTCACCAAGTCCTGTAAAGTTTCTGATTGACACACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS CCA 72 bp AAATCCAAAACCATTTGCGGAAATATTAACTGCCGTTaGCTGTACCACAGCAAGCTCTGCTGTCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: KSKTICGNINCR*LYHSKLCCLKE
Trigger: CTCCTTCAGACAGCAGAGCTTGCTGTGGTACAGCCAACGGCAGTTAATATTTCCGCAAATGGTTTTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS GCA 72 bp AATAGCAAATCCAAAACCATTTGCGGAAATATTAACTaGCGTTGGCTGTACCACAGCAAGCTCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: NSKSKTICGNIN*RWLYHSKLCCL
Trigger: CAGACAGCAGAGCTTGCTGTGGTACAGCCAACGGCAGTTAATATTTCCGCAAATGGTTTTGGATTTGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287097.6
ENST00000422508.6
CDS CCA 72 bp ATTGCCACCTTGAAGCTCACTATGAATCACTCTTCCTaGATCCCAAAATTCACCGTTGGATTTCTGATGTCC +
Preference number: 6 (lower is better)
Translates to: IATLKLTMNHSS*IPKFTVGFLMS
Trigger: GGACATCAGAAATCCAACGGTGAATTTTGGGATCCAGGAAGAGTGATTCATAGTGAGCTTCAAGGTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 72 bp ACTCTTCCTGGATCCCAAAATTCACCGTTGGATTTCTaGTGTCCTTTAAGCCAAGTGTATGTTCTGTGTAAC +
Preference number: 6 (lower is better)
Translates to: TLPGSQNSPLDF*CPLSQVYVLCN
Trigger: GTTACACAGAACATACACTTGGCTTAAAGGACATCAGAAATCCAACGGTGAATTTTGGGATCCAGGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CCA 72 bp CCAAATCCAAGTCTCTGGAAAATGCTTTCGGACATGTaGACTGCTACCCAAAGAAAAGTCATGAATATCTAC +
Preference number: 6 (lower is better)
Translates to: PNPSLWKMLSDM*TATQRKVMNIY
Trigger: GTAGATATTCATGACTTTTCTTTGGGTAGCAGTCCACATGTCCGAAAGCATTTTCCAGAGACTTGGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 72 bp CTGCATTGTCATAAACACCATCAATATAATCCTTCGTaGGGTTTGCATCTGTCAATACCCAGAGTCCACATT +
Preference number: 6 (lower is better)
Translates to: LHCHKHHQYNPS*GLHLSIPRVHI
Trigger: AATGTGGACTCTGGGTATTGACAGATGCAAACCTCACGAAGGATTATATTGATGGTGTTTATGACAATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS GCA 72 bp GTCATAAACACCATCAATATAATCCTTCGTGAGGTTTaGATCTGTCAATACCCAGAGTCCACATTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: VINTINIILREV*ICQYPESTFLK
Trigger: TTTCAGGAATGTGGACTCTGGGTATTGACAGATGCAAACCTCACGAAGGATTATATTGATGGTGTTTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 72 bp GTAATATCATTAGAGGCATTCATCAGATTCACACTTTaGTCAACAGCTACAATCCCAACTATGGAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: VISLEAFIRFTL*STATIPTMESG
Trigger: GCCTGACTCCATAGTTGGGATTGTAGCTGTTGACAAAAGTGTGAATCTGATGAATGCCTCTAATGATATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 90 bp TTTTCCATTGTAATATCATTAGAGGCATTCATCAGATTCACACTTTaGTCAACAGCTACAATCCCAACTATGGAGTCAGGCTGTGTCACA +
Preference number: 6 (lower is better)
Translates to: FSIVISLEAFIRFTL*STATIPTMESGCVT
Trigger: TGTGACACAGCCTGACTCCATAGTTGGGATTGTAGCTGTTGACAAAAGTGTGAATCTGATGAATGCCTCTAATGATATTACAATGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 72 bp GTATTGGATGGGAAGATAGCTGAAAAGTTTTGGAAATaGCTCCAAGATCACTTTGTTGTGACAACCACTGTT +
Preference number: 6 (lower is better)
Translates to: VLDGKIAEKFWK*LQDHFVVTTTV
Trigger: AACAGTGGTTGTCACAACAAAGTGATCTTGGAGTCATTTCCAAAACTTTTCAGCTATCTTCCCATCCAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS TCA 72 bp ACTTCTTGCTTTGGCTTGTATAAGGCCTTGTCTGTTTaGATGAAGACAGATATTCTCTTGGTCTCAAATGAT +
Preference number: 6 (lower is better)
Translates to: TSCFGLYKALSV*MKTDILLVSND
Trigger: ATCATTTGAGACCAAGAGAATATCTGTCTTCATTCAAACAGACAAGGCCTTATACAAGCCAAAGCAAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287097.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 90 bp GGAGGAAATGAGAAACTCAAAGTTTTCAGGGTACTCTGTAGCCTATaGTCAGTCAAGTCTAATAAGATGGATTGTGAATATGATTTTTCT +
Preference number: 6 (lower is better)
Translates to: GGNEKLKVFRVLCSL*SVKSNKMDCEYDFS
Trigger: AGAAAAATCATATTCACAATCCATCTTATTAGACTTGACTGACAATAGGCTACAGAGTACCCTGAAAACTTTGAGTTTCTCATTTCCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1
CDS CAA 72 bp GAGAAACTCAAAGTTTTCAGGGTACTCTGTAGCCTATaGTCAGTCAAGTCTAATAAGATGGATTGTGAATAT +
Preference number: 6 (lower is better)
Translates to: EKLKVFRVLCSL*SVKSNKMDCEY
Trigger: ATATTCACAATCCATCTTATTAGACTTGACTGACAATAGGCTACAGAGTACCCTGAAAACTTTGAGTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287097.6
ENST00000422508.6
ENST00000437994.6
ENST00000649530.1