RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD101 (Homo sapiens)

Ensembl gene IDs: ENSG00000134256

Ensembl transcript IDs: ENST00000256652.8, ENST00000369470.1, ENST00000460180.1, ENST00000467588.1, ENST00000682167.1

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCGGGGCTTTCCTTCCTaGCTGCAGGTGCCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGRGFPS*LQVPLG
Trigger: CCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
3UTR TCA 72 bp AGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTaGCTAGGTCACCACATTCCACACGGGGCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: RSCRGLSGAGSR*LGHHIPHGAFL
Trigger: AAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACTGAAGGCAGCACCGTaGGCACCATCCGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGLKAAP*APSAVT
Trigger: AGTCACAGCGGATGGTGCTCACGGTGCTGCCTTCAG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACCAGGCTGCAGCGGATaGCCACTTCTCTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGPGCSG*PLLCAQ
Trigger: CTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCGGGGCTTTCCTTCCTaGCTGCAGGTGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPRGFPS*LQVPLG
Trigger: CCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGAGGAAGCGTGGGCTCTaGAGGCAGCACCGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWRKRGL*RQHREH
Trigger: GTGCTCACGGTGCTGCCTTCAGAGCCCACGCTTCCT...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTGGTCCCGTGGGATGTaGCACCAGCTCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPWSRGM*HQLTDR
Trigger: CCTGTCTGTGAGCTGGTGGCACATCCCACGGGACCA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAACAGAGTGGCTGAGCTaGCTACACTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGTEWLS*LHSPGC
Trigger: GCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTCCTGGAAGGAAGCGTaGGCTCTGAAGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPSWKEA*ALKAAP
Trigger: CGGTGCTGCCTTCAGAGCCCACGCTTCCTTCCAGGA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACAGCTGACCCTGATCTaGGGACTGGAGCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGQLTLI*GLEPLY
Trigger: ATAGAGAGGCTCCAGTCCTCAGATCAGGGTCAGCTG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAAGAGTACAGAGTGGCTaGGCTGCCTACACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGRVQSG*AAYTLQ
Trigger: CTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATGCACAATGCCATCCTaGCCCATGCCAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGCTMPS*PMPATN
Trigger: GTTTGTGGCTGGCATGGGGCAGGATGGCATTGTGCA...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAATGATCTGGACTTCCTaGGTCGGGTTTGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGMIWTS*VGFVGR
Trigger: CCTGCCGACAAACCCGACCCAGGAAGTCCAGATCAT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGTGTCTGGTCCCGTaGGATGTGCCACCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWLCLVP*DVPPAH
Trigger: GTGAGCTGGTGGCACATCCCACGGGACCAGACACAG...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGGGTCTGTCAGGAGCTaGTTCCAGGTGACTAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGGSVRS*FQVTRS
Trigger: TGACCTAGTCACCTGGAACCAGCTCCTGACAGACCC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGATGTGCAACAAGACTaGGTTGCCCTGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPDVQQD*VALDPL
Trigger: GAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACAGTGCAGGTGCCTCCTaGGCCCCTCTTCCCCATACT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDSAGAS*APLPHT
Trigger: AGTATGGGGAAGAGGGGCTCAGGAGGCACCTGCACT...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGAGCACCATCCGCTGTaGCTCATCGGATGCTTGATT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGEHHPL*LIGCLI
Trigger: AATCAAGCATCCGATGAGTCACAGCGGATGGTGCTC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGGAGCTGGTTCCAGGTaGCTAGGTCACCACATTCCA +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPGAGSR*LGHHIP
Trigger: TGGAATGTGGTGACCTAGTCACCTGGAACCAGCTCC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACGCTGGCTTCCTCAGGTaGACGTGGCTGTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDAGFLR*TWLSGD
Trigger: GTCACCAGACAGCCACGTGCACCTGAGGAAGCCAGC...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTAGCTGGCTGGAACTaGCACGTCACAGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWLAGWN*HVTVSG
Trigger: GCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAG...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGCTGTGTCTGGTCCCGTaGGATGTGCCACCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRLCLVP*DVPPAH
Trigger: GTGAGCTGGTGGCACATCCCACGGGACCAGACACAG...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATGTTGCCATGGTAACTaGGTACCCCATAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGCCHGN*VPHRRH
Trigger: GTGCCTCCTATGGGGTACCCAGTTACCATGGCAACA...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCCGAGGAGCAGATCCTaGAAGGAAGCGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDPRSRS*KEAWAL
Trigger: CAGAGCCCACGCTTCCTTCCAGGATCTGCTCCTCGG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTGCTCTCTGGTAAAGTaGCGGCTATCCTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPCSLVK*RLSSVG
Trigger: ACCCACTGAGGATAGCCGTCACTTTACCAGAGAGCA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACCGCTGCGTATATACTaGGTAAGAGAAGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGPLRIY*VREGSI
Trigger: GATGCTGCCTTCTCTTACGCAGTATATACGCAGCGG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGTGCCATCCTGCCCCATaGCAGCCACAAACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWCHPAP*QPQTRA
Trigger: AGCCCGAGTTTGTGGCTGGCATGGGGCAGGATGGCA...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTCTCCAGCCTTGTGTTaGCATGGTAACTGGGTACCC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPSPALC*HGNWVP
Trigger: GGGTACCCAGTTACCATGGCAACACAAGGCTGGAGA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCTACACTCTCCAGGCTaGAGCGGATGGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDLHSPG*SGWPLL
Trigger: GAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGGGTGTCCATGGAGCTaGCACTCTGCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWGCPWS*HSATLH
Trigger: GTGTAGGGTGGCAGAGTGGCAGCTCCATGGACACCC...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGAACTCGGGCTGTGTCTaGTCCCGTGGGATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLNSGCV*SRGMCH
Trigger: GTGGCACATCCCACGGGACCAGACACAGCCCGAGTT...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGGATGTGAGAGCTAGCTaGCTGGAACTGCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWDVRAS*LELPRH
Trigger: GTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATC...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGCCAGGCTGCAGCGGATaGCCACTTCTCTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLPGCSG*PLLCAQ
Trigger: CTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGG...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGTCCTGGAAGGAAGCGTaGGCTCTGAAGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLSWKEA*ALKAAP
Trigger: CGGTGCTGCCTTCAGAGCCCACGCTTCCTTCCAGGA...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACTTCCCTCCTATTTGTaGTCACACCTCCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGLPSYL*SHLQPL
Trigger: AAGAGGCTGGAGGTGTGACCACAAATAGGAGGGAAG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGAAAGATGCCACATATaGGATGCCTGCCATTTGGGC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPERCHI*DACHLG
Trigger: GCCCAAATGGCAGGCATCTCATATGTGGCATCTTTC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGTGTTAGGTACCAGGTaGCAGAGAGGTGAGTATGTT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGVLGTR*QRGEYV
Trigger: AACATACTCACCTCTCTGTCACCTGGTACCTAACAC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTGGGTCCCAGTTTGTTaGGCTGTACGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDWVPVC*AVRHWL
Trigger: CAGCCAGTGACGTACAGCTCAACAAACTGGGACCCA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAATCCTCAGAGTGGTTTaGTCGGTCTGCTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGILRVV*SVCFLV
Trigger: CACCAAAAAGCAGACCGATCAAACCACTCTGAGGAT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCACGTGGCTGTCTGGTaGCTGCTTTCTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDHVAVW*LLSLKH
Trigger: GTGCTTCAGAGAAAGCAGTCACCAGACAGCCACGTG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTAGTGCAGGTGCCTCCTaGGCCCCTCTTCCCCATACT +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPSAGAS*APLPHT
Trigger: AGTATGGGGAAGAGGGGCTCAGGAGGCACCTGCACT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTGAATCCATTCCGTTaGCTCACAGAACAGCTGACC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPLNPFR*LTEQLT
Trigger: GGTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACGTGGGTCACGGCCACTaGTTACAACCAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDVGHGH*LQPGKP
Trigger: TGGTTTGCCTGGTTGTAAGCAGTGGCCGTGACCCAC...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTACACCAGTACATTCCTaGATCCTCCATCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPTPVHS*ILHLHL
Trigger: CAGGTGGAGATGGAGGATGCAGGAATGTACTGGTGT...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACTCTTGGGATTCAGTTaGCTTCATCTTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGLLGFS*LHLPPR
Trigger: ACGAGGAGGAAGATGAAGGCAACTGAATCCCAAGAG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCCTTCCTGGCTGCAGGTaGCTCTTGGGATTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLLPGCR*LLGFSC
Trigger: GCAACTGAATCCCAAGAGGCACCTGCAGCCAGGAAG...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCTTCCTGGCTGCAGGTaGCTCTTGGGATTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDLPGCR*LLGFSC
Trigger: GCAACTGAATCCCAAGAGGCACCTGCAGCCAGGAAG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGAGTCTGAGAACTCATaGTGGCAGAGAGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPESENS*WQRGYL
Trigger: CAGATACCCTCTCTGCCACCATGAGTTCTCAGACTC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCGGCGCCTTCATCCTCTaGGCCCAGAGAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLGAFIL*AQREDL
Trigger: AAGATCTTCTCTCTGGGCCCAGAGGATGAAGGCGCC...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTTCCTCAGGTGCACGTaGCTGTCTGGTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWFLRCT*LSGDCF
Trigger: AAAGCAGTCACCAGACAGCCACGTGCACCTGAGGAA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGAAGGTGATCTCCAGCTaGAAGGTGGCCCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWKVISS*KVAQSI
Trigger: AATGGACTGGGCCACCTTCCAGCTGGAGATCACCTT...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGGATGTGAGAGCTAGCTaGCTGGAACTGCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRDVRAS*LELPRH
Trigger: GTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATC...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCGACGGCTATCCTCAGTaGGTGAGAGATGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLDGYPQ*VRDGRS
Trigger: GCTTCTGCCATCTCTCACCCACTGAGGATAGCCGTC...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACGACGGCTATCCTCAGTaGGTGAGAGATGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDDGYPQ*VRDGRS
Trigger: GCTTCTGCCATCTCTCACCCACTGAGGATAGCCGTC...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCCATTGCAGCCAATGCTaGCTGGGTAACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLHCSQC*LGNLQL
Trigger: GAGCTGAAGGTTACCCAGTCAGCATTGGCTGCAATG...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTCAGTGTTTGGTGTGTaGCACTCATACTCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWSVFGV*HSYSPA
Trigger: TGCTGGCGAGTATGAGTGTCACACACCAAACACTGA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGCAGCTGACCCTGATCTaGGGACTGGAGCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWQLTLI*GLEPLY
Trigger: ATAGAGAGGCTCCAGTCCTCAGATCAGGGTCAGCTG...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCCACCAGCATCAATGTaGGCAATTTCAGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPPPASM*AISVPL
Trigger: CAATGGGACTGAAATTGCTCACATTGATGCTGGTGG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGGTGACTGCTTTCTCTaGAGCACCTGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWGDCFL*STCQEP
Trigger: AGGTTCCTGGCAGGTGCTTCAGAGAAAGCAGTCACC...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGGGCCGCAGACATAGTTaGGGACAGAACCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRGRRHS*GQNQDS
Trigger: TGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCC...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGCAACAAGACTGAGTTaGCCTGGACCCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWATRLS*PGPSPR
Trigger: ACGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGC...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGCTGGCTTCCTCAGGTaGACGTGGCTGTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHAGFLR*TWLSGD
Trigger: GTCACCAGACAGCCACGTGCACCTGAGGAAGCCAGC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCCTTCCCACACAACTTaGTGCTTGTTCTTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPPSHTT*CLFLVD
Trigger: GTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTGGTCCCGTGGGATGTaGCACCAGCTCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIWSRGM*HQLTDR
Trigger: CCTGTCTGTGAGCTGGTGGCACATCCCACGGGACCA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCTACACTCTCCAGGCTaGAGCGGATGGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPLHSPG*SGWPLL
Trigger: GAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCATGGAGCTGCCACTCTaGCACCCTACACCAGTACAT +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLMELPL*HPTPVH
Trigger: ATGTACTGGTGTAGGGTGGCAGAGTGGCAGCTCCAT...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACATGGAGCTGCCACTCTaGCACCCTACACCAGTACAT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDMELPL*HPTPVH
Trigger: ATGTACTGGTGTAGGGTGGCAGAGTGGCAGCTCCAT...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAACTGTTACTTCTCTCTaGCCAATGCTGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGTVTSL*PMLSLV
Trigger: GACTAAGCTCAGCATTGGCCAGAGAGAAGTAACAGT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGCAGCCAATGCTGACTaGGTAACCTTCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPAANAD*VTFSSK
Trigger: TTTAGAGCTGAAGGTTACCCAGTCAGCATTGGCTGC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACAATGCCTTGAAGCTGTaGGTCACGGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDNALKL*VTATAY
Trigger: GTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATT...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTCTCCAGCTGGAAGGTaGCCCAGTCCATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDSPAGR*PSPFSP
Trigger: TGGAGAAAATGGACTGGGCCACCTTCCAGCTGGAGA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTACTGAAGGTTTCCATTaGACCGGGACAAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPTEGFH*TGTRCY
Trigger: GTAGCATCTTGTCCCGGTCCAATGGAAACCTTCAGT...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTTGCTTGGGTGTCCATaGAGCTGCCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGLLGCP*SCHSAT
Trigger: GGTGGCAGAGTGGCAGCTCCATGGACACCCAAGCAA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCAGGTGACAGAGAGGTaGGTATGTTGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGQVTER*VCWAVA
Trigger: AGCCACAGCCCAACATACTCACCTCTCTGTCACCTG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTTGGGTCCCAGTTTGTTaGGCTGTACGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPWVPVC*AVRHWL
Trigger: CAGCCAGTGACGTACAGCTCAACAAACTGGGACCCA...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCTGTGCGTGTTTTCATaGCCTCTGCTACCACACATC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDLCVFS*PLLPHI
Trigger: GATGTGTGGTAGCAGAGGTCATGAAAACACGCACAG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTGGTGACTGCTTTCTCTaGAGCACCTGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGGDCFL*STCQEP
Trigger: AGGTTCCTGGCAGGTGCTTCAGAGAAAGCAGTCACC...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTAGCTGGTGGAAGATGTaGGAGCTAGCTGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGSWWKM*ELAGWN
Trigger: GTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGAGAGCTCTTGGACTTaGCTCCTTGAATTCACTTTT +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGESSWT*LLEFTF
Trigger: AAAAGTGAATTCAAGGAGTCAAGTCCAAGAGCTCTC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTAGAGTACAGAGTGGCTaGGCTGCCTACACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPRVQSG*AAYTLQ
Trigger: CTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGAGCACCATCCGCTGTaGCTCATCGGATGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLEHHPL*LIGCLI
Trigger: AATCAAGCATCCGATGAGTCACAGCGGATGGTGCTC...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGCTGAAGGCAGCACCGTaGGCACCATCCGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLLKAAP*APSAVT
Trigger: AGTCACAGCGGATGGTGCTCACGGTGCTGCCTTCAG...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCAGGAAGCGTGGGCTCTaGAGGCAGCACCGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPRKRGL*RQHREH
Trigger: GTGCTCACGGTGCTGCCTTCAGAGCCCACGCTTCCT...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGGACGAAGGGACAGATaGACAGGAAATAGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPGRRDR*TGNRVK
Trigger: CTTTACTCTATTTCCTGTTCATCTGTCCCTTCGTCC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGTGCCATCCTGCCCCATaGCAGCCACAAACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLCHPAP*QPQTRA
Trigger: AGCCCGAGTTTGTGGCTGGCATGGGGCAGGATGGCA...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTTGCACAATGCCATCCTaGCCCATGCCAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPCTMPS*PMPATN
Trigger: GTTTGTGGCTGGCATGGGGCAGGATGGCATTGTGCA...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGACACCAGTACATTCCTaGATCCTCCATCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRTPVHS*ILHLHL
Trigger: CAGGTGGAGATGGAGGATGCAGGAATGTACTGGTGT...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGGTGTCCATGGAGCTaGCACTCTGCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLGCPWS*HSATLH
Trigger: GTGTAGGGTGGCAGAGTGGCAGCTCCATGGACACCC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGGAGTCTGAGAACTCATaGTGGCAGAGAGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRESENS*WQRGYL
Trigger: CAGATACCCTCTCTGCCACCATGAGTTCTCAGACTC...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTGGCGCCTTCATCCTCTaGGCCCAGAGAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGGAFIL*AQREDL
Trigger: AAGATCTTCTCTCTGGGCCCAGAGGATGAAGGCGCC...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGAACTCGGGCTGTGTCTaGTCCCGTGGGATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLNSGCV*SRGMCH
Trigger: GTGGCACATCCCACGGGACCAGACACAGCCCGAGTT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGTGTTGCCATGGTAACTaGGTACCCCATAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWCCHGN*VPHRRH
Trigger: GTGCCTCCTATGGGGTACCCAGTTACCATGGCAACA...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCTCAGATCTCTGGCCTaGTTCCGAGACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDLRSLA*FRDFSD
Trigger: ATCTGAGAAGTCTCGGAACCAGGCCAGAGATCTGAG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATCAATAGTGCCATTGTaGGTGATTCGAATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGSIVPL*VIRISW
Trigger: CCAGCTTATTCGAATCACCCACAATGGCACTATTGA...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGCCGAGGAGCAGATCCTaGAAGGAAGCGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLPRSRS*KEAWAL
Trigger: CAGAGCCCACGCTTCCTTCCAGGATCTGCTCCTCGG...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGTCAGTGTTTGGTGTGTaGCACTCATACTCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLSVFGV*HSYSPA
Trigger: TGCTGGCGAGTATGAGTGTCACACACCAAACACTGA...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTCCTTACCGAGAGTCTaGGAACTCATGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGSLPRV*ELMVAE
Trigger: CTCTGCCACCATGAGTTCTCAGACTCTCGGTAAGGA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCAGGTGACAGAGAGGTaGGTATGTTGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIQVTER*VCWAVA
Trigger: AGCCACAGCCCAACATACTCACCTCTCTGTCACCTG...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGCTGTGCGTGTTTTCATaGCCTCTGCTACCACACATC +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLLCVFS*PLLPHI
Trigger: GATGTGTGGTAGCAGAGGTCATGAAAACACGCACAG...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTAGCTGGTGGAAGATGTaGGAGCTAGCTGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRISWWKM*ELAGWN
Trigger: GTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCT...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTATCAGTGTTGGAGTTaGTGGAGAGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWYQCWS*WRALGL
Trigger: AAGTCCAAGAGCTCTCCATCAACTCCAACACTGATA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCACATGTTACGGTCATaGAGCTATAGCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGHMLRS*SYSSPW
Trigger: CCAGGGGGAGCTATAGCTTCATGACCGTAACATGTG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGCTGAATCCATTCCGTTaGCTCACAGAACAGCTGACC +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLLNPFR*LTEQLT
Trigger: GGTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAG...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTGTGGGTCACGGCCACTaGTTACAACCAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIVGHGH*LQPGKP
Trigger: TGGTTTGCCTGGTTGTAAGCAGTGGCCGTGACCCAC...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTTCTCCAGCCTTGTGTTaGCATGGTAACTGGGTACCC +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPSPALC*HGNWVP
Trigger: GGGTACCCAGTTACCATGGCAACACAAGGCTGGAGA...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCAACAGAGTGGCTGAGCTaGCTACACTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPTEWLS*LHSPGC
Trigger: GCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGT...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGCTCTTGGGATTCAGTTaGCTTCATCTTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRLLGFS*LHLPPR
Trigger: ACGAGGAGGAAGATGAAGGCAACTGAATCCCAAGAG...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATTCAGCTCTAAACAGTaGTCCTTTCTGAACTGTTAC +
Preference number: 4 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGFSSKQ*SFLNCY
Trigger: GTAACAGTTCAGAAAGGACCACTGTTTAGAGCTGAA...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTATGATCTGGACTTCCTaGGTCGGGTTTGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIMIWTS*VGFVGR
Trigger: CCTGCCGACAAACCCGACCCAGGAAGTCCAGATCAT...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGTGCTAATGATCTaGACTTCCTGGGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLLVLMI*TSWVGF
Trigger: AAACCCGACCCAGGAAGTCCAGATCATTAGCACCAA...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTTGGTGCTAATGATCTaGACTTCCTGGGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDLVLMI*TSWVGF
Trigger: AAACCCGACCCAGGAAGTCCAGATCATTAGCACCAA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTGAGTATGTTGGGCTGTaGCTTTGGATGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGEYVGL*LWMPHR
Trigger: CCTGTGAGGCATCCAAAGCCACAGCCCAACATACTC...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACGCTGGATCCTCAGAGTaGTTTGATCGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDAGSSE*FDRSAF
Trigger: AAAAGCAGACCGATCAAACCACTCTGAGGATCCAGC...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTCCAGCTCAGATCTCTaGCCTGGTTCCGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGSSSDL*PGSETS
Trigger: AGAAGTCTCGGAACCAGGCCAGAGATCTGAGCTGGA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTCCTCAGTGGCATCATaGACTAGGAGTTGTGAACGA +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLSSVAS*TRSCER
Trigger: TCGTTCACAACTCCTAGTCCATGATGCCACTGAGGA...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTCCTCAGTGGCATCATaGACTAGGAGTTGTGAACGA +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDSSVAS*TRSCER
Trigger: TCGTTCACAACTCCTAGTCCATGATGCCACTGAGGA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCGGTCCAGTACACTTTaGAGACACGTACCTTACTTC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDRSSTL*RHVPYF
Trigger: GAAGTAAGGTACGTGTCTCCAAAGTGTACTGGACCG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCCACCTTTCCTTCCTaGCTGCAGGTGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPPTFPS*LQVPLG
Trigger: CCCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACAACAGTGGTCCTTTCTaGACTGTTACTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDNSGPF*TVTSLW
Trigger: CCAGAGAGAAGTAACAGTTCAGAAAGGACCACTGTT...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACTCCTTACCGAGAGTCTaGGAACTCATGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHSLPRV*ELMVAE
Trigger: CTCTGCCACCATGAGTTCTCAGACTCTCGGTAAGGA...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGCACGTGGCTGTCTGGTaGCTGCTTTCTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLHVAVW*LLSLKH
Trigger: GTGCTTCAGAGAAAGCAGTCACCAGACAGCCACGTG...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTGCTCTCTGGTAAAGTaGCGGCTATCCTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRICSLVK*RLSSVG
Trigger: ACCCACTGAGGATAGCCGTCACTTTACCAGAGAGCA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTTTCTCTGTGGGGTGTaGAACTCATCCCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDFLCGV*NSSPVF
Trigger: AAAAACTGGGGATGAGTTTCACACCCCACAGAGAAA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGAAAGTCTGTAGAGGATaGACGGTAACAGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLKVCRG*TVTVQV
Trigger: CACCTGCACTGTTACCGTTCATCCTCTACAGACTTT...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTATGCCACATATGAGATaGCTGCCATTTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPMPHMR*LPFGPA
Trigger: TGCTGGCCCAAATGGCAGGCATCTCATATGTGGCAT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCCGCTGCGTATATACTaGGTAAGAGAAGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPPLRIY*VREGSI
Trigger: GATGCTGCCTTCTCTTACGCAGTATATACGCAGCGG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGCAACAAGACTGAGTTaGCCTGGACCCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLATRLS*PGPSPR
Trigger: ACGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTGTTTTCATGACCTCTaGTACCACACATCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDCFHDL*YHTSVG
Trigger: GCCTACAGATGTGTGGTAGCAGAGGTCATGAAAACA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTCCCACACAACTTGCTaGTTGTTCTTGGTAGACATG +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLSHTTC*LFLVDM
Trigger: CATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGA...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGACTTCTCAGATACTCTaGACTCATATGTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWTSQIL*THMCHC
Trigger: ACAGTGGCACATATGAGTGCAGAGTATCTGAGAAGT...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCTAGCTGGCTGGAACTaGCACGTCACAGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPLAGWN*HVTVSG
Trigger: GCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTTTTCTCCAAGCTTGTaGCAAGTGCCATTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWFSPSL*QVPFVD
Trigger: GTCTACAAATGGCACTTGGCACAAGCTTGGAGAAAA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCACTGTTACTTCTCTCTaGCCAATGCTGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLTVTSL*PMLSLV
Trigger: GACTAAGCTCAGCATTGGCCAGAGAGAAGTAACAGT...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTTTCTCATCAGTGTTTaGTGTGTGACACTCATACTC +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPFLISV*CVTLIL
Trigger: GAGTATGAGTGTCACACACCAAACACTGATGAGAAA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGAGTATGTTGGGCTGTaGCTTTGGATGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHEYVGL*LWMPHR
Trigger: CCTGTGAGGCATCCAAAGCCACAGCCCAACATACTC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGCACACTTCTTGCTGCTaGCTTCCTCAGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLHTSCC*LPQVHV
Trigger: CACGTGCACCTGAGGAAGCCAGCAGCAAGAAGTGTG...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGCACACTTCTTGCTGCTaGCTTCCTCAGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLHTSCC*LPQVHV
Trigger: CACGTGCACCTGAGGAAGCCAGCAGCAAGAAGTGTG...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTAAGGTGATCTCCAGCTaGAAGGTGGCCCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIKVISS*KVAQSI
Trigger: AATGGACTGGGCCACCTTCCAGCTGGAGATCACCTT...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGCTGTCTCTTCCTCAGTaGCATCATGGACTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWLSLPQ*HHGLGV
Trigger: AACTCCTAGTCCATGATGCCACTGAGGAAGAGACAG...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCTTGCTTGGGTGTCCATaGAGCTGCCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPLLGCP*SCHSAT
Trigger: GGTGGCAGAGTGGCAGCTCCATGGACACCCAAGCAA...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGGTGTTGACAACTTCCTaGCCTTCCAGTATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRVLTTS*PSSISR
Trigger: TCTGCTTATACTGGAAGGCCAGGAAGTTGTCAACAC...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTTTCTTTCCGTGTGTTaGAACGCAGTGTTGACAACT +
Preference number: 4 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWFLSVC*NAVLTT
Trigger: AGTTGTCAACACTGCGTTCCAACACACGGAAAGAAA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCTTCCCTCCTATTTGTaGTCACACCTCCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPLPSYL*SHLQPL
Trigger: AAGAGGCTGGAGGTGTGACCACAAATAGGAGGGAAG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGAAAGATGCCACATATaGGATGCCTGCCATTTGGGC +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHERCHI*DACHLG
Trigger: GCCCAAATGGCAGGCATCTCATATGTGGCATCTTTC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCGATGTGCAACAAGACTaGGTTGCCCTGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPDVQQD*VALDPL
Trigger: GAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATC...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTGTTTCATCTGGATCCTaGATCCATTCCGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPVSSGS*IHSVAS
Trigger: TGAGGCAACGGAATGGATTCAGGATCCAGATGAAAC...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCCACCAGCATCAATGTaGGCAATTTCAGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPPPASM*AISVPL
Trigger: CAATGGGACTGAAATTGCTCACATTGATGCTGGTGG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGTTTCTCTGTGGGGTGTaGAACTCATCCCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWFLCGV*NSSPVF
Trigger: AAAAACTGGGGATGAGTTTCACACCCCACAGAGAAA...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTAAAGTCTGTAGAGGATaGACGGTAACAGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGKVCRG*TVTVQV
Trigger: CACCTGCACTGTTACCGTTCATCCTCTACAGACTTT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTGACTCATCGGATGCTTaGTTAATCCACTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGDSSDA*LIHLLG
Trigger: CCCAAGCAAGTGGATTAATCAAGCATCCGATGAGTC...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGTGGAGTTTTGAGATGTaGAACAAGACTGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWWSFEM*NKTELP
Trigger: GGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCA...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCCTTCCCACACAACTTaGTGCTTGTTCTTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPPSHTT*CLFLVD
Trigger: GTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCACTTCTCAGATACTCTaGACTCATATGTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLTSQIL*THMCHC
Trigger: ACAGTGGCACATATGAGTGCAGAGTATCTGAGAAGT...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTGAACGAAATAAAGACTaGGACACTTTCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPERNKD*DTFVFF
Trigger: AAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTC...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTGGACCGGGACAAGATaGTACATTCTATATCAGTGT +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDWTGTR*YILYQC
Trigger: ACACTGATATAGAATGTAGCATCTTGTCCCGGTCCA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCCATCATGTTGCAAGTaGACCAGCAATTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDPSCCK*TSNLLP
Trigger: TGGAAGTAAATTGCTGGTGCACTTGCAACATGATGG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCAGCAAGCCATCATGTTaGAAGTGCACCAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLSKPSC*KCTSNL
Trigger: TAAATTGCTGGTGCACTTGCAACATGATGGCTTGCT...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTGCAGCCAATGCTGACTaGGTAACCTTCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPAANAD*VTFSSK
Trigger: TTTAGAGCTGAAGGTTACCCAGTCAGCATTGGCTGC...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGAATGCCTTGAAGCTGTaGGTCACGGCCACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLNALKL*VTATAY
Trigger: GTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATT...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGTTCCTCAGGTGCACGTaGCTGTCTGGTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLFLRCT*LSGDCF
Trigger: AAAGCAGTCACCAGACAGCCACGTGCACCTGAGGAA...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCTCAGATCTCTGGCCTaGTTCCGAGACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHLRSLA*FRDFSD
Trigger: ATCTGAGAAGTCTCGGAACCAGGCCAGAGATCTGAG...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGCCACGTCACAGTGAGTaGCACCTTGAGGTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLPRHSE*HLEVRV
Trigger: TACTCTGACCTCAAGGTGCCACTCACTGTGACGTGG...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCTGTCTCTTCCTCAGTaGCATCATGGACTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGLSLPQ*HHGLGV
Trigger: AACTCCTAGTCCATGATGCCACTGAGGAAGAGACAG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTTTCTTTCCGTGTGTTaGAACGCAGTGTTGACAACT +
Preference number: 4 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRFLSVC*NAVLTT
Trigger: AGTTGTCAACACTGCGTTCCAACACACGGAAAGAAA...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGTGTTAGGTACCAGGTaGCAGAGAGGTGAGTATGTT +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHVLGTR*QRGEYV
Trigger: AACATACTCACCTCTCTGTCACCTGGTACCTAACAC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCAGACTTTACAGTAACTaGAATCTTCTGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLRLYSN*NLLSPA
Trigger: AGCTGGACTCAGAAGATTTCAGTTACTGTAAAGTCT...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCAAACATCACTTGCGGCTaGCGGCTCATCAGACTAACT +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPNITCG*RLIRLT
Trigger: AGTTAGTCTGATGAGCCGTCAGCCGCAAGTGATGTT...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGAACATCACTTGCGGCTaGCGGCTCATCAGACTAACT +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLNITCG*RLIRLT
Trigger: AGTTAGTCTGATGAGCCGTCAGCCGCAAGTGATGTT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTGGACGAAGGGACAGATaGACAGGAAATAGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPGRRDR*TGNRVK
Trigger: CTTTACTCTATTTCCTGTTCATCTGTCCCTTCGTCC...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTGGAGTTTTGAGATGTaGAACAAGACTGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGWSFEM*NKTELP
Trigger: GGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTCCCACACAACTTGCTaGTTGTTCTTGGTAGACATG +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGSHTTC*LFLVDM
Trigger: CATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGAGATGCCTGCCATTTaGGCCAGCACAGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLEMPAI*ASTVLF
Trigger: AAAAAGGACTGTGCTGGCCCAAATGGCAGGCATCTC...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTCAGCTCTAAACAGTaGTCCTTTCTGAACTGTTAC +
Preference number: 4 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLFSSKQ*SFLNCY
Trigger: GTAACAGTTCAGAAAGGACCACTGTTTAGAGCTGAA...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACTCTGAGAACTCATGGTaGCAGAGAGGGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHSENSW*QRGYLE
Trigger: TTCCAGATACCCTCTCTGCCACCATGAGTTCTCAGA...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGCTGGATCCTCAGAGTaGTTTGATCGGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHAGSSE*FDRSAF
Trigger: AAAAGCAGACCGATCAAACCACTCTGAGGATCCAGC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTAAAATCTTTCACTGCTaGCTGGATCCTCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPKIFHC*LDPQSG
Trigger: ACCACTCTGAGGATCCAGCCAGCAGTGAAAGATTTT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTAAAATCTTTCACTGCTaGCTGGATCCTCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGKIFHC*LDPQSG
Trigger: ACCACTCTGAGGATCCAGCCAGCAGTGAAAGATTTT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCTCTCCAGCTGGAAGGTaGCCCAGTCCATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPSPAGR*PSPFSP
Trigger: TGGAGAAAATGGACTGGGCCACCTTCCAGCTGGAGA...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCTCCAGCTCAGATCTCTaGCCTGGTTCCGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPSSSDL*PGSETS
Trigger: AGAAGTCTCGGAACCAGGCCAGAGATCTGAGCTGGA...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTACAGGTCAAAGGTGTTaGTTAACATCACTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPTGQRC*LTSLAA
Trigger: AGCCGCAAGTGATGTTAACCAACACCTTTGACCTGT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTACAGGTCAAAGGTGTTaGTTAACATCACTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGTGQRC*LTSLAA
Trigger: AGCCGCAAGTGATGTTAACCAACACCTTTGACCTGT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACGTCACAGTGAGTaGCACCTTGAGGTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPPRHSE*HLEVRV
Trigger: TACTCTGACCTCAAGGTGCCACTCACTGTGACGTGG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCGGTCCAGTACACTTTaGAGACACGTACCTTACTTC +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHRSSTL*RHVPYF
Trigger: GAAGTAAGGTACGTGTCTCCAAAGTGTACTGGACCG...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGTCACAGAGTACAGAGTaGCTGAGCTGCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLSQSTE*LSCLHS
Trigger: AGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGA...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACAACAGTGGTCCTTTCTaGACTGTTACTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHNSGPF*TVTSLW
Trigger: CCAGAGAGAAGTAACAGTTCAGAAAGGACCACTGTT...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGTTTCATCTGGATCCTaGATCCATTCCGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLVSSGS*IHSVAS
Trigger: TGAGGCAACGGAATGGATTCAGGATCCAGATGAAAC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCAATCCTCAGAGTGGTTTaGTCGGTCTGCTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPILRVV*SVCFLV
Trigger: CACCAAAAAGCAGACCGATCAAACCACTCTGAGGAT...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGCTGTACGTCACTGGCTaGAAACCGCTCTGTATACAA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLLYVTG*KPLCIQ
Trigger: TTGTATACAGAGCGGTTTGCAGCCAGTGACGTACAG...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCCATCATGTTGCAAGTaGACCAGCAATTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPPSCCK*TSNLLP
Trigger: TGGAAGTAAATTGCTGGTGCACTTGCAACATGATGG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGTCTGAGAACTCATGGTaGCAGAGAGGGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLSENSW*QRGYLE
Trigger: TTCCAGATACCCTCTCTGCCACCATGAGTTCTCAGA...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCATCCAAGTTTCATCTaGATCCTGAATCCATTCCGT +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGHPSFI*ILNPFR
Trigger: ACGGAATGGATTCAGGATCCAGATGAAACTTGGATG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCTCACAGAGTACAGAGTaGCTGAGCTGCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPSQSTE*LSCLHS
Trigger: AGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGA...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGATTAATCCACTTGCTTaGGTGTCCATGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLINPLA*VSMELP
Trigger: TGGCAGCTCCATGGACACCCAAGCAAGTGGATTAAT...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGATTAATCCACTTGCTTaGGTGTCCATGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLINPLA*VSMELP
Trigger: TGGCAGCTCCATGGACACCCAAGCAAGTGGATTAAT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCAATTTCAGTCCCATTaGAGAACCAAATGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPQFQSH*RTKCLE
Trigger: TTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGAGAGCTCTTGGACTTaGCTCCTTGAATTCACTTTT +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHESSWT*LLEFTF
Trigger: AAAAGTGAATTCAAGGAGTCAAGTCCAAGAGCTCTC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCATATCAGTGTTGGAGTTaGTGGAGAGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPYQCWS*WRALGL
Trigger: AAGTCCAAGAGCTCTCCATCAACTCCAACACTGATA...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACTACTTCCTGTGGGCTTaGGTTTCAATTCTGTTAGTC +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHYFLWA*VSILLV
Trigger: GACTAACAGAATTGAAACTCAAGCCCACAGGAAGTA...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCGACTCATCGGATGCTTaGTTAATCCACTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPDSSDA*LIHLLG
Trigger: CCCAAGCAAGTGGATTAATCAAGCATCCGATGAGTC...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCTGTACGTCACTGGCTaGAAACCGCTCTGTATACAA +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPLYVTG*KPLCIQ
Trigger: TTGTATACAGAGCGGTTTGCAGCCAGTGACGTACAG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGTGTTTTCATGACCTCTaGTACCACACATCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLCFHDL*YHTSVG
Trigger: GCCTACAGATGTGTGGTAGCAGAGGTCATGAAAACA...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATCCAAGTTTCATCTaGATCCTGAATCCATTCCGT +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIHPSFI*ILNPFR
Trigger: ACGGAATGGATTCAGGATCCAGATGAAACTTGGATG...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTACTTTCGTCTTCTTTTaGAACCGGGATAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGTFVFF*NRDRKF
Trigger: GAATTTCCTATCCCGGTTCCAAAAGAAGACGAAAGT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCACTGAAGGTTTCCATTaGACCGGGACAAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPTEGFH*TGTRCY
Trigger: GTAGCATCTTGTCCCGGTCCAATGGAAACCTTCAGT...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGTGTTGACAACTTCCTaGCCTTCCAGTATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLVLTTS*PSSISR
Trigger: TCTGCTTATACTGGAAGGCCAGGAAGTTGTCAACAC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGTAATGTTGACTTaGAAATCTTTCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLAVMLT*KSFTAG
Trigger: GCCAGCAGTGAAAGATTTTCAAGTCAACATTACAGC...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGCTGTAATGTTGACTTaGAAATCTTTCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLAVMLT*KSFTAG
Trigger: GCCAGCAGTGAAAGATTTTCAAGTCAACATTACAGC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGTACTTCCTGTGGGCTTaGGTTTCAATTCTGTTAGTC +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLYFLWA*VSILLV
Trigger: GACTAACAGAATTGAAACTCAAGCCCACAGGAAGTA...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGTGGACCGGGACAAGATaGTACATTCTATATCAGTGT +
Preference number: 4 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLWTGTR*YILYQC
Trigger: ACACTGATATAGAATGTAGCATCTTGTCCCGGTCCA...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCATTTTCTCCAAGCTTGTaGCAAGTGCCATTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPFSPSL*QVPFVD
Trigger: GTCTACAAATGGCACTTGGCACAAGCTTGGAGAAAA...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR GCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGAGCAAGCCATCATGTTaGAAGTGCACCAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLSKPSC*KCTSNL
Trigger: TAAATTGCTGGTGCACTTGCAACATGATGGCTTGCT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CCA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTTTCTCATCAGTGTTTaGTGTGTGACACTCATACTC +
Preference number: 4 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIFLISV*CVTLIL
Trigger: GAGTATGAGTGTCACACACCAAACACTGATGAGAAA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCATCAATAGTGCCATTGTaGGTGATTCGAATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPSIVPL*VIRISW
Trigger: CCAGCTTATTCGAATCACCCACAATGGCACTATTGA...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGCAATTTCAGTCCCATTaGAGAACCAAATGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLQFQSH*RTKCLE
Trigger: TTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTG...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR TCA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGAGACTTTACAGTAACTaGAATCTTCTGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLRLYSN*NLLSPA
Trigger: AGCTGGACTCAGAAGATTTCAGTTACTGTAAAGTCT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR GCA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGAACGAAATAAAGACTaGGACACTTTCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHERNKD*DTFVFF
Trigger: AAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CCA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCACTTTCGTCTTCTTTTaGAACCGGGATAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPTFVFF*NRDRKF
Trigger: GAATTTCCTATCCCGGTTCCAAAAGAAGACGAAAGT...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGTGGGTCCCAGTTTGTaGAGCTGTACGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGVGPSL*SCTSLA
Trigger: AGCCAGTGACGTACAGCTCAACAAACTGGGACCCAC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS CCA 90 bp AGGTGGCCCAGTCCATTTTCTCCAGCCTTGTGTTGCCATGGTAACTaGGTACCCCATAGGAGGCACCCAGCTGCACAATGCCATCCTGCC +
Preference number: 5 (lower is better)
Translates to: RWPSPFSPALCCHGN*VPHRRHPAAQCHPA
Trigger: GGCAGGATGGCATTGTGCAGCTGGGTGCCTCCTATGGGGTACCCAGTTACCATGGCAACACAAGGCTGGAGAAAATGGACTGGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp GAAGATGTGAGAGCTAGCTGGCTGGAACTGCCACGTCACAGTGAGTaGCACCTTGAGGTCAGAGTAACCGGCCCTCACGACACAGGACAG +
Preference number: 5 (lower is better)
Translates to: EDVRASWLELPRHSE*HLEVRVTGPHDTGQ
Trigger: CTGTCCTGTGTCGTGAGGGCCGGTTACTCTGACCTCAAGGTGCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTTCCTGGGTCGGGTTaGTCGGCAGGTAAACAGACC +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWLPGSG*SAGKQT
Trigger: GGTCTGTTTACCTGCCGACAAACCCGACCCAGGAAG...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACCTTGGGGCCTAACTTaGAAACCTGGAGCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGPWGLT*KPGALL
Trigger: AAGGAGAGCTCCAGGTTTCAAAGTTAGGCCCCAAGG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS TCA 90 bp GCTGGCTTCCTCAGGTGCACGTGGCTGTCTGGTGACTGCTTTCTCTaGAGCACCTGCCAGGAACCTGTGCGTGTTTTCATGACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: AGFLRCTWLSGDCFL*STCQEPVRVFMTSA
Trigger: AGCAGAGGTCATGAAAACACGCACAGGTTCCTGGCAGGTGCTTCAGAGAAAGCAGTCACCAGACAGCCACGTGCACCTGAGGAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp GAAGGCAGCACCGTGAGCACCATCCGCTGTGACTCATCGGATGCTTaGTTAATCCACTTGCTTGGGTGTCCATGGAGCTGCCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: EGSTVSTIRCDSSDA*LIHLLGCPWSCHSA
Trigger: GGCAGAGTGGCAGCTCCATGGACACCCAAGCAAGTGGATTAATCAAGCATCCGATGAGTCACAGCGGATGGTGCTCACGGTGCTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp TCTCCAGCTGGAAGGTGGCCCAGTCCATTTTCTCCAGCCTTGTGTTaGCATGGTAACTGGGTACCCCATAGGAGGCACCCAGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: SPAGRWPSPFSPALC*HGNWVPHRRHPAAQ
Trigger: TTGTGCAGCTGGGTGCCTCCTATGGGGTACCCAGTTACCATGGCAACACAAGGCTGGAGAAAATGGACTGGGCCACCTTCCAGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCCTGAATCCATTCCGTaGCCTCACAGAACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPPESIP*PHRTAD
Trigger: GTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAGG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS TCA 90 bp TGGCTTCCTCCTCCATCCTGTGTTAGGTACCAGGTGACAGAGAGGTaGGTATGTTGGGCTGTGGCTTTGGATGCCTCACAGGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: WLPPPSCVRYQVTER*VCWAVALDASQVRA
Trigger: AGCCCTCACCTGTGAGGCATCCAAAGCCACAGCCCAACATACTCACCTCTCTGTCACCTGGTACCTAACACAGGATGGAGGAGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp CAGCATCCTTCATCTGGAGTTTTGAGATGTGCAACAAGACTGAGTTaGCCTGGACCCTCTCCACGTAGACGTCTCCGCTTCGCACCCGCT +
Preference number: 5 (lower is better)
Translates to: QHPSSGVLRCATRLS*PGPSPRRRLRFAPA
Trigger: AGCGGGTGCGAAGCGGAGACGTCTACGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp TCTCTGAAGCACCTGCCAGGAACCTGTGCGTGTTTTCATGACCTCTaGTACCACACATCTGTAGGCGCCTTCATCCTCTGGGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SLKHLPGTCACFHDL*YHTSVGAFILWAQR
Trigger: TCTCTGGGCCCAGAGGATGAAGGCGCCTACAGATGTGTGGTAGCAGAGGTCATGAAAACACGCACAGGTTCCTGGCAGGTGCTTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp GAGCTGCCTACACTCTCCAGGCTGCAGCGGATGGCCACTTCTCTGTaGTCAGTCACATTTTCGGTCCAGTACACTTTGGAGACACGTACC +
Preference number: 5 (lower is better)
Translates to: ELPTLSRLQRMATSL*SVTFSVQYTLETRT
Trigger: GGTACGTGTCTCCAAAGTGTACTGGACCGAAAATGTGACTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp ACATCACAGAGTACAGAGTGGCTGAGCTGCCTACACTCTCCAGGCTaGAGCGGATGGCCACTTCTCTGTGCTCAGTCACATTTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: TSQSTEWLSCLHSPG*SGWPLLCAQSHFRS
Trigger: GGACCGAAAATGTGACTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGGTGGCCAGTTACATaGCAGCCAATGCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRWWPVT*QPMLTG
Trigger: CCCAGTCAGCATTGGCTGCAATGTAACTGGCCACCA...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGGTAGTGGGTCCCAGTTaGTTGAGCTGTACGTCACTG +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWVVGPS*LSCTSL
Trigger: CAGTGACGTACAGCTCAACAAACTGGGACCCACTAC...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAGGAGCTCTCCTTGACTaGCTCTCTCTTTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGGALLD*LSLCSH
Trigger: ATGACTACAAAGAGAGAGCAAGTCAAGGAGAGCTCC...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATCGGTCCAGTACACTTaGGAGACACGTACCTTACTT +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGSVQYT*ETRTLL
Trigger: AAGTAAGGTACGTGTCTCCAAAGTGTACTGGACCGA...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTGTTGGAACGCAGTGTaGACAACTTCCTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWCWNAV*TTSWPS
Trigger: GGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS TCA 90 bp TCTCAGTGGCTTGGCTTCCTCCTCCATCCTGTGTTAGGTACCAGGTaGCAGAGAGGTGAGTATGTTGGGCTGTGGCTTTGGATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: SQWLGFLLHPVLGTR*QRGEYVGLWLWMPH
Trigger: GTGAGGCATCCAAAGCCACAGCCCAACATACTCACCTCTCTGTCACCTGGTACCTAACACAGGATGGAGGAGGAAGCCAAGCCACTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp CCTCTCCACGTAGACGTCTCCGCTTCGCACCCGCTGCGTATATACTaGGTAAGAGAAGGCAGCATCCTTGGTGCTAATGATCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: PLHVDVSASHPLRIY*VREGSILGANDLDF
Trigger: GAAGTCCAGATCATTAGCACCAAGGATGCTGCCTTCTCTTACGCAGTATATACGCAGCGGGTGCGAAGCGGAGACGTCTACGTGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp TTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTGGCTGAGCTaGCTACACTCTCCAGGCTGCAGCGGATGGCCACTTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: FLCSSTTSQSTEWLS*LHSPGCSGWPLLCA
Trigger: AGCACAGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGAACAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp AGTACAGAGTGGCTGAGCTGCCTACACTCTCCAGGCTGCAGCGGATaGCCACTTCTCTGTGCTCAGTCACATTTTCGGTCCAGTACACTT +
Preference number: 5 (lower is better)
Translates to: STEWLSCLHSPGCSG*PLLCAQSHFRSSTL
Trigger: AAGTGTACTGGACCGAAAATGTGACTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTCTTCCTGGGTCGGGTTaGTCGGCAGGTAAACAGACC +
Preference number: 5 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPLPGSG*SAGKQT
Trigger: GGTCTGTTTACCTGCCGACAAACCCGACCCAGGAAG...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTGCAACAAGACTGAGTaGCCCTGGACCCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGCNKTE*PWTLST
Trigger: CGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAAGAACCAAATGCCTaGAAGCTGTGGGTCACGGCC +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWEEPNA*KLWVTA
Trigger: GGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTC...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGAACTTGCTGCTTGTTCTaGGTAGACATGACCACACTT +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGTCCLF*VDMTTL
Trigger: AAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGT...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTCCTTCCCACACAACTaGCTGCTTGTTCTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPSFPHN*LLVLGR
Trigger: TCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGGACAGGTCAAAGGTGTaGGTTAACATCACTTGCGGC +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWDRSKV*VNITCG
Trigger: GCCGCAAGTGATGTTAACCAACACCTTTGACCTGTC...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS TCA 90 bp CACATCTGTAGGCGCCTTCATCCTCTGGGCCCAGAGAGAAGATCTTaGGAGAGAAAGCCTTGGGGCCTAACTTTGAAACCTGGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: HICRRLHPLGPERRS*ERKPWGLTLKPGAL
Trigger: GAGAGCTCCAGGTTTCAAAGTTAGGCCCCAAGGCTTTCTCTCTCAAGATCTTCTCTCTGGGCCCAGAGGATGAAGGCGCCTACAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp AGAGTTTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTGGCTaGGCTGCCTACACTCTCCAGGCTGCAGCGGATGGCCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: RVFSVPVPHHRVQSG*AAYTLQAAADGHFS
Trigger: AGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGAACAGAGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp CTCCATCTCCACCTGATGAAGCTTCAGGACAAAGTCTGTAGAGGATaGACGGTAACAGTGCAGGTGCCTCCTGAGCCCCTCTTCCCCATA +
Preference number: 5 (lower is better)
Translates to: LHLHLMKLQDKVCRG*TVTVQVPPEPLFPI
Trigger: TATGGGGAAGAGGGGCTCAGGAGGCACCTGCACTGTTACCGTTCATCCTCTACAGACTTTGTCCTGAAGCTTCATCAGGTGGAGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp GTGTCCATGGAGCTGCCACTCTGCCACCCTACACCAGTACATTCCTaGATCCTCCATCTCCACCTGATGAAGCTTCAGGACAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: VSMELPLCHPTPVHS*ILHLHLMKLQDKVC
Trigger: ACAGACTTTGTCCTGAAGCTTCATCAGGTGGAGATGGAGGATGCAGGAATGTACTGGTGTAGGGTGGCAGAGTGGCAGCTCCATGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp TCATATGTGCCACTGTCTGTGATGGCAGTGAAGGTGATCTCCAGCTaGAAGGTGGCCCAGTCCATTTTCTCCAGCCTTGTGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: SYVPLSVMAVKVISS*KVAQSIFSSLVLPW
Trigger: CCATGGCAACACAAGGCTGGAGAAAATGGACTGGGCCACCTTCCAGCTGGAGATCACCTTCACTGCCATCACAGACAGTGGCACATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp TTCCAGAGTTTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTaGCTGAGCTGCCTACACTCTCCAGGCTGCAGCGGATGGCCACTT +
Preference number: 5 (lower is better)
Translates to: FQSFLCSSTTSQSTE*LSCLHSPGCSGWPL
Trigger: AAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGAACAGAGAAAACTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTTGGTGGCCAGTTACATaGCAGCCAATGCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGWWPVT*QPMLTG
Trigger: CCCAGTCAGCATTGGCTGCAATGTAACTGGCCACCA...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCGAGAAGGCAGCATCCTaGGTGCTAATGATCTGGACT +
Preference number: 5 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLEKAAS*VLMIWT
Trigger: AGTCCAGATCATTAGCACCAAGGATGCTGCCTTCTC...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTGCAACAAGACTGAGTaGCCCTGGACCCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: FLGNLPKAADIVEDRTRICNKTE*PWTLST
Trigger: CGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCCTTCATCTGGAGTTTaGAGATGTGCAACAAGACTG +
Preference number: 5 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPPSSGV*RCATRL
Trigger: CAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGG...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTGTGGGTCCCAGTTTGTaGAGCTGTACGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPVGPSL*SCTSLA
Trigger: AGCCAGTGACGTACAGCTCAACAAACTGGGACCCAC...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGCCTTGGGGCCTAACTTaGAAACCTGGAGCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWPWGLT*KPGALL
Trigger: AAGGAGAGCTCCAGGTTTCAAAGTTAGGCCCCAAGG...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTTGAGAGAGAAAGCCTaGGGGCCTAACTTTGAAACC +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWLREKA*GPNFET
Trigger: GGTTTCAAAGTTAGGCCCCAAGGCTTTCTCTCTCAA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGACTTGGACTTGACTCCTaGAATTCACTTTTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: GHHIPHGAFLPGCRCLLGLGLDS*NSLLAC
Trigger: GCAAGCTAAAAGTGAATTCAAGGAGTCAAGTCCAAG...TCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCGTCTTCCCTCCTATTaGTGGTCACACCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGRLPSY*WSHLQP
Trigger: AGGCTGGAGGTGTGACCACAAATAGGAGGGAAGACG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS TCA 90 bp GGCCCAGGACTCCACCAGCATCAATGTGAGCAATTTCAGTCCCATTaGAGAACCAAATGCCTTGAAGCTGTGGGTCACGGCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: GPGLHQHQCEQFQSH*RTKCLEAVGHGHCL
Trigger: TAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTGCTCACATTGATGCTGGTGGAGTCCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp TCAATAGTGCCATTGTGGGTGATTCGAATAAGCTGGTGGAAGATGTaGGAGCTAGCTGGCTGGAACTGCCACGTCACAGTGAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: SIVPLWVIRISWWKM*ELAGWNCHVTVSGT
Trigger: GGTGCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCTTATTCGAATCACCCACAATGGCACTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp CCAGCCTTACAGAGAAAGGCGAGTGTCTCTCCTTCCCACACAACTTaGTGCTTGTTCTTGGTAGACATGACCACACTTCTTGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: PALQRKASVSPSHTT*CLFLVDMTTLLAAG
Trigger: GCCAGCAGCAAGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCTCTGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp ATTGTGGGTGATTCGAATAAGCTGGTGGAAGATGTGAGAGCTAGCTaGCTGGAACTGCCACGTCACAGTGAGTGGCACCTTGAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: IVGDSNKLVEDVRAS*LELPRHSEWHLEVR
Trigger: TCTGACCTCAAGGTGCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCTTATTCGAATCACCCACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTAGAGAGGTGAGTATGTaGGGCTGTGGCTTTGGATGC +
Preference number: 5 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGREVSM*GCGFGC
Trigger: GCATCCAAAGCCACAGCCCAACATACTCACCTCTCT...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTGTAGTGGGTCCCAGTTaGTTGAGCTGTACGTCACTG +
Preference number: 5 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPVVGPS*LSCTSL
Trigger: CAGTGACGTACAGCTCAACAAACTGGGACCCACTAC...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp CACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGGGAGCTCTCCTTGACTaGCTCTCTCTTTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: HTLVSPIKKPPPFLPGCRGALLD*LSLCSH
Trigger: ATGACTACAAAGAGAGAGCAAGTCAAGGAGAGCTCC...CCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp CTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCCACACAACTTGCTGCTaGTTCTTGGTAGACATGACC +
Preference number: 5 (lower is better)
Translates to: LVSPIKKPPPFLPGCRCLHTTCC*FLVDMT
Trigger: GGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTG...GAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS GCA 90 bp GCCTTACAGAGAAAGGCGAGTGTCTCTCCTTCCCACACAACTTGCTaGTTGTTCTTGGTAGACATGACCACACTTCTTGCTGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALQRKASVSPSHTTC*LFLVDMTTLLAAGF
Trigger: GAAGCCAGCAGCAAGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCTCTGTAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGGATCCTCAGAGTGGTTaGATCGGTCTGCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWDPQSG*IGLLFG
Trigger: ACCAAAAAGCAGACCGATCAAACCACTCTGAGGATC...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGAAGAACCAAATGCCTaGAAGCTGTGGGTCACGGCC +
Preference number: 5 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLEEPNA*KLWVTA
Trigger: GGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGAACCTGGAGCTCTCCTaGACTTGCTCTCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWNLELS*TCSLFV
Trigger: TACAAAGAGAGAGCAAGTCAAGGAGAGCTCCAGGTT...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGTTGAGAGAGAAAGCCTaGGGGCCTAACTTTGAAACC +
Preference number: 5 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLLREKA*GPNFET
Trigger: GGTTTCAAAGTTAGGCCCCAAGGCTTTCTCTCTCAA...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGCTGCAGGTGCCTTTACTTCCTGTGGGCTaGAGTTTCAATTCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: VTRSPHSTRGFPSWLQVPLLPVG*SFNSVS
Trigger: ACTAACAGAATTGAAACTCAAGCCCACAGGAAGTAA...AGGCACCTGCAGCCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGTCGGTCCAGTACACTTaGGAGACACGTACCTTACTT +
Preference number: 5 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLSVQYT*ETRTLL
Trigger: AAGTAAGGTACGTGTCTCCAAAGTGTACTGGACCGA...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACTGTTGGAACGCAGTGTaGACAACTTCCTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHCWNAV*TTSWPS
Trigger: GGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACA...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTTTTCTTTCCGTGTGTaGGAACGCAGTGTTGACAAC +
Preference number: 5 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDFSFRV*ERSVDN
Trigger: GTTGTCAACACTGCGTTCCAACACACGGAAAGAAAA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS GCA 90 bp CCTGAATGTAGTGGGTCCCAGTTTGTTGAGCTGTACGTCACTGGCTaGAAACCGCTCTGTATACAAGGGCCCAGGGACCAATATAAAATC +
Preference number: 5 (lower is better)
Translates to: PECSGSQFVELYVTG*KPLCIQGPRDQYKI
Trigger: GATTTTATATTGGTCCCTGGGCCCTTGTATACAGAGCGGTTTGCAGCCAGTGACGTACAGCTCAACAAACTGGGACCCACTACATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGCCTGAATCCATTCCGTaGCCTCACAGAACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLPESIP*PHRTAD
Trigger: GTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAGG...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGGTCACACAACTTGCTGCTaGTTCTTGGTAGACATGACC +
Preference number: 5 (lower is better)
Translates to: SSPWGSDFRMVMRKVHLGHTTCC*FLVDMT
Trigger: GGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTG...ACCCAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp AACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACGACAGGTCAAAGGTGTaGGTTAACATCACTTGCGGC +
Preference number: 5 (lower is better)
Translates to: NLPKAADIVEDRTRIHSHDRSKV*VNITCG
Trigger: GCCGCAAGTGATGTTAACCAACACCTTTGACCTGTC...GTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACGAATTCACTTTTAGCTaGCTCTCTGGTAAAGTGACG +
Preference number: 5 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDEFTFS*LSGKVT
Trigger: CGTCACTTTACCAGAGAGCAAGCTAAAAGTGAATTC...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACCATTCTATATCAGTGTaGGAGTTGATGGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDHSISV*ELMESS
Trigger: AGAGCTCTCCATCAACTCCAACACTGATATAGAATG...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp ACTTGGGTTCATCTAGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTGACTTCTTTTCTCCAAGCTaGTGCCAAGTGCCATTTGTA +
Preference number: 5 (lower is better)
Translates to: TWVHLEVAGVCQELVPGDFFSPS*CQVPFV
Trigger: TACAAATGGCACTTGGCACAAGCTTGGAGAAAAGAA...GTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCTAGATGAACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCGTCTTCCCTCCTATTaGTGGTCACACCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPRLPSY*WSHLQP
Trigger: AGGCTGGAGGTGTGACCACAAATAGGAGGGAAGACG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS TCA 90 bp TCACAGGTGAGGGCTAATGGCTCACCTTCCTCCTTACCGAGAGTCTaGGAACTCATGGTGGCAGAGAGGGTATCTGGAATAACAATTAGA +
Preference number: 5 (lower is better)
Translates to: SQVRANGSPSSLPRV*ELMVAERVSGITIR
Trigger: TCTAATTGTTATTCCAGATACCCTCTCTGCCACCATGAGTTCTCAGACTCTCGGTAAGGAGGAAGGTGAGCCATTAGCCCTCACCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp CAGCCTCTTTCAAGTCCACCCAGAGAGCTTTTTCTTTCCGTGTGTTaGAACGCAGTGTTGACAACTTCCTGGCCTTCCAGTATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: QPLSSPPRELFLSVC*NAVLTTSWPSSISR
Trigger: TCTGCTTATACTGGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACACACGGAAAGAAAAAGCTCTCTGGGTGGACTTGAAAGAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000467588.1
ENST00000682167.1
CDS-3UTR CAA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCAGAGAGGTGAGTATGTaGGGCTGTGGCTTTGGATGC +
Preference number: 5 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPREVSM*GCGFGC
Trigger: GCATCCAAAGCCACAGCCCAACATACTCACCTCTCT...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCATTCACACCCTACTTGCTGCTTGTTCTaGGTAGACATGACCACACTT +
Preference number: 5 (lower is better)
Translates to: LPKAADIVEDRTRIHSHPTCCLF*VDMTTL
Trigger: AAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGT...AGGGTGTGAATGAATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTCCTTCCCACACAACTaGCTGCTTGTTCTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: FLGNLPKAADIVEDRTRISFPHN*LLVLGR
Trigger: TCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGAATTCACTTTTAGCTaGCTCTCTGGTAAAGTGACG +
Preference number: 5 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLEFTFS*LSGKVT
Trigger: CGTCACTTTACCAGAGAGCAAGCTAAAAGTGAATTC...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGCTTGGACTTGACTCCTaGAATTCACTTTTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWLGLDS*NSLLAC
Trigger: GCAAGCTAAAAGTGAATTCAAGGAGTCAAGTCCAAG...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp AGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTTTCCTTCCTGGTTTTATAACATTGGTTaGGTCCATCTCCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: SWFQVTRSPHSTRGFPSWFYNIG*VHLQDL
Trigger: AAGATCCTGGAGATGGACCAAACCAATGTTATAAAA...CCAGGAAGGAAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS CCA 90 bp GGTTTGATCGGTCTGCTTTTTGGTGATGAACATCCAAGTTTCATCTaGATCCTGAATCCATTCCGTTGCCTCACAGAACAGCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: GLIGLLFGDEHPSFI*ILNPFRCLTEQLTL
Trigger: CAGGGTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAGGATCCAGATGAAACTTGGATGTTCATCACCAAAAAGCAGACCGATCAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTCCTTCATCTGGAGTTTaGAGATGTGCAACAAGACTG +
Preference number: 5 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIPSSGV*RCATRL
Trigger: CAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGG...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGGATTTCTCATCAGTGTTaGGTGTGTGACACTCATACT +
Preference number: 5 (lower is better)
Translates to: LAQLKSPHLSFLAAGASWISHQC*VCDTHT
Trigger: AGTATGAGTGTCACACACCAAACACTGATGAGAAAT...CCAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGGATCCTCAGAGTGGTTaGATCGGTCTGCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLDPQSG*IGLLFG
Trigger: ACCAAAAAGCAGACCGATCAAACCACTCTGAGGATC...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGAACCTGGAGCTCTCCTaGACTTGCTCTCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLNLELS*TCSLFV
Trigger: TACAAAGAGAGAGCAAGTCAAGGAGAGCTCCAGGTT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGGCTGCAGGTGCCTCTTGTTACTTCCTGTGGGCTaGAGTTTCAATTCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: VSPIKKPPPFLPGCRCLLLLPVG*SFNSVS
Trigger: ACTAACAGAATTGAAACTCAAGCCCACAGGAAGTAA...CAAGAGGCACCTGCAGCCAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS TCA 90 bp ACGACACAGGACAGGTCAAAGGTGTTGGTTAACATCACTTGCGGCTaGCGGCTCATCAGACTAACTTGTAAACTTGACTCCAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: TTQDRSKVLVNITCG*RLIRLTCKLDSRDF
Trigger: AAAGTCTCTGGAGTCAAGTTTACAAGTTAGTCTGATGAGCCGTCAGCCGCAAGTGATGTTAACCAACACCTTTGACCTGTCCTGTGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 90 bp TCCTCAGTGGCATCATGGACTAGGAGTTGTGAACGAAATAAAGACTaGGACACTTTCGTCTTCTTTTGGAACCGGGATAGGAAATTCCCC +
Preference number: 5 (lower is better)
Translates to: SSVASWTRSCERNKD*DTFVFFWNRDRKFP
Trigger: GGGGAATTTCCTATCCCGGTTCCAAAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTCACAACTCCTAGTCCATGATGCCACTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp TACATTGCAGCCAATGCTGACTGGGTAACCTTCAGCTCTAAACAGTaGTCCTTTCTGAACTGTTACTTCTCTCTGGCCAATGCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: YIAANADWVTFSSKQ*SFLNCYFSLANAEL
Trigger: AAGCTCAGCATTGGCCAGAGAGAAGTAACAGTTCAGAAAGGACCACTGTTTAGAGCTGAAGGTTACCCAGTCAGCATTGGCTGCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp AGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCAATATCAGTGTTGGAGTaGATGGAGAGCTCTTGGACT +
Preference number: 5 (lower is better)
Translates to: RTEPGFIHTLVSPIKKPPISVLE*MESSWT
Trigger: AGTCCAAGAGCTCTCCATCAACTCCAACACTGATAT...TGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGATATCAGTGTTGGAGTaGATGGAGAGCTCTTGGACT +
Preference number: 5 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLISVLE*MESSWT
Trigger: AGTCCAAGAGCTCTCCATCAACTCCAACACTGATAT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGTTTTCTTTCCGTGTGTaGGAACGCAGTGTTGACAAC +
Preference number: 5 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLFSFRV*ERSVDN
Trigger: GTTGTCAACACTGCGTTCCAACACACGGAAAGAAAA...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS CCA 90 bp GTCAGAAGGAGAAAGAAAGATGCCACATATGAGATGCCTGCCATTTaGGCCAGCACAGTCCTTTTTCGTCCCAATAGTGTCACTAACATT +
Preference number: 5 (lower is better)
Translates to: VRRRKKDATYEMPAI*ASTVLFRPNSVTNI
Trigger: AATGTTAGTGACACTATTGGGACGAAAAAGGACTGTGCTGGCCCAAATGGCAGGCATCTCATATGTGGCATCTTTCTTTCTCCTTCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256652.8
ENST00000682167.1
CDS-3UTR CAA 90 bp GATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCCACCTTTCCTTCCTGTTCTTTTCTCCAAGCTaGTGCCAAGTGCCATTTGTA +
Preference number: 5 (lower is better)
Translates to: DSFTPWLAQLKSPHLSFLFFSPS*CQVPFV
Trigger: TACAAATGGCACTTGGCACAAGCTTGGAGAAAAGAA...CAGGAAGGAAAGGTGGGGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS CCA 90 bp AGGAGTTGTGAACGAAATAAAGACTGCGACACTTTCGTCTTCTTTTaGAACCGGGATAGGAAATTCCCCCATTCAATAGTGCCATTGTGG +
Preference number: 5 (lower is better)
Translates to: RSCERNKDCDTFVFF*NRDRKFPHSIVPLW
Trigger: CCACAATGGCACTATTGAATGGGGGAATTTCCTATCCCGGTTCCAAAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTCACAACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS-3UTR CAA 90 bp TATAGCTCCCCCTGGGGTAGTGACTTCAGGATGGTAATGAGGAAAGTTCACTTGATTTCTCATCAGTGTTaGGTGTGTGACACTCATACT +
Preference number: 5 (lower is better)
Translates to: YSSPWGSDFRMVMRKVHLISHQC*VCDTHT
Trigger: AGTATGAGTGTCACACACCAAACACTGATGAGAAAT...CAAGTGAACTTTCCTCATTACCATCCTGAAGTCACTACCCCAGGGGGAGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369470.1
CDS-3UTR CAA 90 bp TTGAGGACAGAACCAGGATTCATTCACACCCTGGTTAGCCCAATTAAAAAGCCCCATTCTATATCAGTGTaGGAGTTGATGGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRTEPGFIHTLVSPIKKPHSISV*ELMESS
Trigger: AGAGCTCTCCATCAACTCCAACACTGATATAGAATG...GGGCTTTTTAATTGGGCTAACCAGGGTGTGAATGAATCCTGGTTCTGTCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS-3UTR CAA 90 bp TTCCTAGGTAACTTGCCCAAGGCCGCAGACATAGTTGAGGACAGAACCAGGATTTTTTATAACATTGGTTaGGTCCATCTCCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: FLGNLPKAADIVEDRTRIFYNIG*VHLQDL
Trigger: AAGATCCTGGAGATGGACCAAACCAATGTTATAAAA...AATCCTGGTTCTGTCCTCAACTATGTCTGCGGCCTTGGGCAAGTTACCTAGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000256652.8
CDS TCA 90 bp CATTGGACCGGGACAAGATGCTACATTCTATATCAGTGTTGGAGTTaGTGGAGAGCTCTTGGACTTGACTCCTTGAATTCACTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: HWTGTRCYILYQCWS*WRALGLDSLNSLLA
Trigger: AGCTAAAAGTGAATTCAAGGAGTCAAGTCCAAGAGCTCTCCATCAACTCCAACACTGATATAGAATGTAGCATCTTGTCCCGGTCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 90 bp CATAAACTTCTACTTCACACTGATACACTCCTGTCTCTTCCTCAGTaGCATCATGGACTAGGAGTTGTGAACGAAATAAAGACTGCGACA +
Preference number: 5 (lower is better)
Translates to: HKLLLHTDTLLSLPQ*HHGLGVVNEIKTAT
Trigger: TGTCGCAGTCTTTATTTCGTTCACAACTCCTAGTCCATGATGCCACTGAGGAAGAGACAGGAGTGTATCAGTGTGAAGTAGAAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp CTACATTCTATATCAGTGTTGGAGTTGATGGAGAGCTCTTGGACTTaGCTCCTTGAATTCACTTTTAGCTTGCTCTCTGGTAAAGTGACG +
Preference number: 5 (lower is better)
Translates to: LHSISVLELMESSWT*LLEFTFSLLSGKVT
Trigger: CGTCACTTTACCAGAGAGCAAGCTAAAAGTGAATTCAAGGAGTCAAGTCCAAGAGCTCTCCATCAACTCCAACACTGATATAGAATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 90 bp GAGGCATTAGTGGAAACAGGAGAAAAATACCAAATAATGGCTAACTaGAGGTTTCCATTGGACCGGGACAAGATGCTACATTCTATATCA +
Preference number: 5 (lower is better)
Translates to: EALVETGEKYQIMAN*RFPLDRDKMLHSIS
Trigger: TGATATAGAATGTAGCATCTTGTCCCGGTCCAATGGAAACCTTCAGTTAGCCATTATTTGGTATTTTTCTCCTGTTTCCACTAATGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp TCCTGCCCCATGCCAGCCACAAACTCGGGCTGTGTCTaGTCCCGTGGGATGTGCCACCAGCTCACAGACAGG +
Preference number: 6 (lower is better)
Translates to: SCPMPATNSGCV*SRGMCHQLTDR
Trigger: CCTGTCTGTGAGCTGGTGGCACATCCCACGGGACCAGACACAGCCCGAGTTTGTGGCTGGCATGGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp GCCACAAACTCGGGCTGTGTCTGGTCCCGTGGGATGTaGCACCAGCTCACAGACAGGGGACTTTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ATNSGCVWSRGM*HQLTDRGLSAP
Trigger: TGGAGCTGAAAGTCCCCTGTCTGTGAGCTGGTGGCACATCCCACGGGACCAGACACAGCCCGAGTTTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp AGAGCTAGCTGGCTGGAACTGCCACGTCACAGTGAGTaGCACCTTGAGGTCAGAGTAACCGGCCCTCACGAC +
Preference number: 6 (lower is better)
Translates to: RASWLELPRHSE*HLEVRVTGPHD
Trigger: GTCGTGAGGGCCGGTTACTCTGACCTCAAGGTGCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp AGAAGTTGCCGGGGTCTGTCAGGAGCTGGTTCCAGGTaGCTAGGTCACCACATTCCACACGGGGCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: RSCRGLSGAGSR*LGHHIPHGAWE
Trigger: TTCCCAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCTCCTGACAGACCCCGGCAACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460180.1
ENST00000467588.1
ENST00000682167.1
CDS CAA 90 bp AGGAGCTGGTTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTaGGGAAGAAACAGGCAGCAAGGCAGGAAGCTTTCCTTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: RSWFQVTRSPHSTRG*GRNRQQGRKLSFLA
Trigger: AGCCAGGAAGGAAAGCTTCCTGCCTTGCTGCCTGTTTCTTCCCAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAACCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467588.1
ENST00000682167.1
CDS TCA 72 bp TCTGTTCCAGTACCACATCACAGAGTACAGAGTGGCTaGGCTGCCTACACTCTCCAGGCTGCAGCGGATGGC +
Preference number: 6 (lower is better)
Translates to: SVPVPHHRVQSG*AAYTLQAAADG
Trigger: GCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGAACAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp GGAAGGTGGCCCAGTCCATTTTCTCCAGCCTTGTGTTaGCATGGTAACTGGGTACCCCATAGGAGGCACCCA +
Preference number: 6 (lower is better)
Translates to: GRWPSPFSPALC*HGNWVPHRRHP
Trigger: TGGGTGCCTCCTATGGGGTACCCAGTTACCATGGCAACACAAGGCTGGAGAAAATGGACTGGGCCACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp AGTACAGAGTGGCTGAGCTGCCTACACTCTCCAGGCTaGAGCGGATGGCCACTTCTCTGTGCTCAGTCACAT +
Preference number: 6 (lower is better)
Translates to: STEWLSCLHSPG*SGWPLLCAQSH
Trigger: ATGTGACTGAGCACAGAGAAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp TCCAGTACCACATCACAGAGTACAGAGTGGCTGAGCTaGCTACACTCTCCAGGCTGCAGCGGATGGCCACTT +
Preference number: 6 (lower is better)
Translates to: SSTTSQSTEWLS*LHSPGCSGWPL
Trigger: AAGTGGCCATCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp CCAGCTGGAAGGTGGCCCAGTCCATTTTCTCCAGCCTaGTGTTGCCATGGTAACTGGGTACCCCATAGGAGG +
Preference number: 6 (lower is better)
Translates to: PAGRWPSPFSPA*CCHGNWVPHRR
Trigger: CCTCCTATGGGGTACCCAGTTACCATGGCAACACAAGGCTGGAGAAAATGGACTGGGCCACCTTCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp CTCAGGTGCACGTGGCTGTCTGGTGACTGCTTTCTCTaGAGCACCTGCCAGGAACCTGTGCGTGTTTTCATG +
Preference number: 6 (lower is better)
Translates to: LRCTWLSGDCFL*STCQEPVRVFM
Trigger: CATGAAAACACGCACAGGTTCCTGGCAGGTGCTTCAGAGAAAGCAGTCACCAGACAGCCACGTGCACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp AGTGGGTCCCAGTTTGTTGAGCTGTACGTCACTGGCTaGAAACCGCTCTGTATACAAGGGCCCAGGGACCAA +
Preference number: 6 (lower is better)
Translates to: SGSQFVELYVTG*KPLCIQGPRDQ
Trigger: TTGGTCCCTGGGCCCTTGTATACAGAGCGGTTTGCAGCCAGTGACGTACAGCTCAACAAACTGGGACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp CACCTGCCAGGAACCTGTGCGTGTTTTCATGACCTCTaGTACCACACATCTGTAGGCGCCTTCATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HLPGTCACFHDL*YHTSVGAFILW
Trigger: CCAGAGGATGAAGGCGCCTACAGATGTGTGGTAGCAGAGGTCATGAAAACACGCACAGGTTCCTGGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp GAGCTGCCACTCTGCCACCCTACACCAGTACATTCCTaGATCCTCCATCTCCACCTGATGAAGCTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: ELPLCHPTPVHS*ILHLHLMKLQD
Trigger: GTCCTGAAGCTTCATCAGGTGGAGATGGAGGATGCAGGAATGTACTGGTGTAGGGTGGCAGAGTGGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp CCACTGTCTGTGATGGCAGTGAAGGTGATCTCCAGCTaGAAGGTGGCCCAGTCCATTTTCTCCAGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: PLSVMAVKVISS*KVAQSIFSSLV
Trigger: CACAAGGCTGGAGAAAATGGACTGGGCCACCTTCCAGCTGGAGATCACCTTCACTGCCATCACAGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp AACCGGCCCTCACGACACAGGACAGGTCAAAGGTGTTaGTTAACATCACTTGCGGCTGACGGCTCATCAGAC +
Preference number: 6 (lower is better)
Translates to: NRPSRHRTGQRC*LTSLAADGSSD
Trigger: GTCTGATGAGCCGTCAGCCGCAAGTGATGTTAACCAACACCTTTGACCTGTCCTGTGTCGTGAGGGCCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp ACAGGAAATAGAGTAAAGGGGCCGAGGAGCAGATCCTaGAAGGAAGCGTGGGCTCTTGCTGCAGGCACAGTT +
Preference number: 6 (lower is better)
Translates to: TGNRVKGPRSRS*KEAWALAAGTV
Trigger: AACTGTGCCTGCAGCAAGAGCCCACGCTTCCTTCCAGGATCTGCTCCTCGGCCCCTTTACTCTATTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467588.1
CDS CAA 72 bp TTCCAGGTGACTAGGTCACCACATTCCACACGGGGCTaGGGAAGAAACAGGCAGCAAGGCAGGAAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: FQVTRSPHSTRG*GRNRQQGRKLS
Trigger: GGAAAGCTTCCTGCCTTGCTGCCTGTTTCTTCCCAAGCCCCGTGTGGAATGTGGTGACCTAGTCACCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467588.1
ENST00000682167.1
CDS TCA 72 bp CCATTCCGTTGCCTCACAGAACAGCTGACCCTGATCTaGGGACTGGAGCCTCTCTATGGACAGCCTGAATGT +
Preference number: 6 (lower is better)
Translates to: PFRCLTEQLTLI*GLEPLYGQPEC
Trigger: ACATTCAGGCTGTCCATAGAGAGGCTCCAGTCCTCAGATCAGGGTCAGCTGTTCTGTGAGGCAACGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp CACCTGATGAAGCTTCAGGACAAAGTCTGTAGAGGATaGACGGTAACAGTGCAGGTGCCTCCTGAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: HLMKLQDKVCRG*TVTVQVPPEPL
Trigger: GAGGGGCTCAGGAGGCACCTGCACTGTTACCGTTCATCCTCTACAGACTTTGTCCTGAAGCTTCATCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp ACCGTGAGCACCATCCGCTGTGACTCATCGGATGCTTaGTTAATCCACTTGCTTGGGTGTCCATGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TVSTIRCDSSDA*LIHLLGCPWSC
Trigger: GCAGCTCCATGGACACCCAAGCAAGTGGATTAATCAAGCATCCGATGAGTCACAGCGGATGGTGCTCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp TTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTaGCTGAGCTGCCTACACTCTCCAGGCTGCAGCGGA +
Preference number: 6 (lower is better)
Translates to: FLCSSTTSQSTE*LSCLHSPGCSG
Trigger: TCCGCTGCAGCCTGGAGAGTGTAGGCAGCTCAGCCACTCTGTACTCTGTGATGTGGTACTGGAACAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp TGGAGCCTCTCTATGGACAGCCTGAATGTAGTGGGTCCCAGTTTGTaGAGCTGTACGTCACTGGCTGCAAACCGCTCTGTATACAAGGGC +
Preference number: 6 (lower is better)
Translates to: WSLSMDSLNVVGPSL*SCTSLAANRSVYKG
Trigger: GCCCTTGTATACAGAGCGGTTTGCAGCCAGTGACGTACAGCTCAACAAACTGGGACCCACTACATTCAGGCTGTCCATAGAGAGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp CCATTGTGGGTGATTCGAATAAGCTGGTGGAAGATGTaGGAGCTAGCTGGCTGGAACTGCCACGTCACAGTG +
Preference number: 6 (lower is better)
Translates to: PLWVIRISWWKM*ELAGWNCHVTV
Trigger: CACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCTTATTCGAATCACCCACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp GGAGAGCGCTGGGAATACTCTCCAAAGCGGTGTCTCTaGAGGAAAGTGACAGGAGGGTTTTATGGGGTGATG +
Preference number: 6 (lower is better)
Translates to: GERWEYSPKRCL*RKVTGGFYGVM
Trigger: CATCACCCCATAAAACCCTCCTGTCACTTTCCTTCAGAGACACCGCTTTGGAGAGTATTCCCAGCGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682167.1
CDS GCA 72 bp GTAGACGTCTCCGCTTCGCACCCGCTGCGTATATACTaGGTAAGAGAAGGCAGCATCCTTGGTGCTAATGAT +
Preference number: 6 (lower is better)
Translates to: VDVSASHPLRIY*VREGSILGAND
Trigger: ATCATTAGCACCAAGGATGCTGCCTTCTCTTACGCAGTATATACGCAGCGGGTGCGAAGCGGAGACGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp TCATCTGGAGTTTTGAGATGTGCAACAAGACTGAGTTaGCCTGGACCCTCTCCACGTAGACGTCTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: SSGVLRCATRLS*PGPSPRRRLRF
Trigger: GAAGCGGAGACGTCTACGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp TACTCGCCAGCATCCTTCATCTGGAGTTTTGAGATGTaGAACAAGACTGAGTTGCCCTGGACCCTCTCCACG +
Preference number: 6 (lower is better)
Translates to: YSPASFIWSFEM*NKTELPWTLST
Trigger: CGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGGATGCTGGCGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp AAACAGGCAGCAAGGCAGGAAGCTTTCCTTCCTGGCTaGAGGTGCCTCTTGGGATTCAGTTGCCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: KQAARQEAFLPG*RCLLGFSCLHL
Trigger: AAGATGAAGGCAACTGAATCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCTTCCTGCCTTGCTGCCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467588.1
ENST00000682167.1
CDS CCA 72 bp GATTCGAATAAGCTGGTGGAAGATGTGAGAGCTAGCTaGCTGGAACTGCCACGTCACAGTGAGTGGCACCTT +
Preference number: 6 (lower is better)
Translates to: DSNKLVEDVRAS*LELPRHSEWHL
Trigger: AAGGTGCCACTCACTGTGACGTGGCAGTTCCAGCCAGCTAGCTCTCACATCTTCCACCAGCTTATTCGAATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp AGAAAGGCGAGTGTCTCTCCTTCCCACACAACTTGCTGCTTGTTCTaGGTAGACATGACCACACTTCTTGCTGCTGGCTTCCTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RKASVSPSHTTCCLF*VDMTTLLAAGFLRC
Trigger: GCACCTGAGGAAGCCAGCAGCAAGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp TTGGTGTGTGACACTCATACTCGCCAGCATCCTTCATCTGGAGTTTaGAGATGTGCAACAAGACTGAGTTGCCCTGGACCCTCTCCACGT +
Preference number: 6 (lower is better)
Translates to: LVCDTHTRQHPSSGV*RCATRLSCPGPSPR
Trigger: ACGTGGAGAGGGTCCAGGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGGATGCTGGCGAGTATGAGTGTCACACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp ACCAGCCTTACAGAGAAAGGCGAGTGTCTCTCCTTCCCACACAACTaGCTGCTTGTTCTTGGTAGACATGACCACACTTCTTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: TSLTEKGECLSFPHN*LLVLGRHDHTSCCW
Trigger: CCAGCAGCAAGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCTCTGTAAGGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp AGGGCTAATGGCTCACCTTCCTCCTTACCGAGAGTCTaGGAACTCATGGTGGCAGAGAGGGTATCTGGAATA +
Preference number: 6 (lower is better)
Translates to: RANGSPSSLPRV*ELMVAERVSGI
Trigger: TATTCCAGATACCCTCTCTGCCACCATGAGTTCTCAGACTCTCGGTAAGGAGGAAGGTGAGCCATTAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp AGAACCAAATGCCTTGAAGCTGTGGGTCACGGCCACTaGTTACAACCAGGCAAACCAGTTCTAAGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: RTKCLEAVGHGH*LQPGKPVLRVS
Trigger: GGAAACCCTTAGAACTGGTTTGCCTGGTTGTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATTTGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp TTCAGTCCCATTGAAGAACCAAATGCCTTGAAGCTGTaGGTCACGGCCACTGCTTACAACCAGGCAAACCAG +
Preference number: 6 (lower is better)
Translates to: FSPIEEPNALKL*VTATAYNQANQ
Trigger: CTGGTTTGCCTGGTTGTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTCAATGGGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp GACACTCATACTCGCCAGCATCCTTCATCTGGAGTTTaGAGATGTGCAACAAGACTGAGTTGCCCTGGACCC +
Preference number: 6 (lower is better)
Translates to: DTHTRQHPSSGV*RCATRLSCPGP
Trigger: GGGTCCAGGGCAACTCAGTCTTGTTGCACATCTCAAAACTCCAGATGAAGGATGCTGGCGAGTATGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp TCTATGGACAGCCTGAATGTAGTGGGTCCCAGTTTGTaGAGCTGTACGTCACTGGCTGCAAACCGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SMDSLNVVGPSL*SCTSLAANRSV
Trigger: TACAGAGCGGTTTGCAGCCAGTGACGTACAGCTCAACAAACTGGGACCCACTACATTCAGGCTGTCCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp CCAGCCTCTTTCAAGTCCACCCAGAGAGCTTTTTCTTTCCGTGTGTaGGAACGCAGTGTTGACAACTTCCTGGCCTTCCAGTATAAGCAG +
Preference number: 6 (lower is better)
Translates to: PASFKSTQRAFSFRV*ERSVDNFLAFQYKQ
Trigger: CTGCTTATACTGGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACACACGGAAAGAAAAAGCTCTCTGGGTGGACTTGAAAGAGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000467588.1
ENST00000682167.1
CDS TCA 72 bp CTCCACCAGCATCAATGTGAGCAATTTCAGTCCCATTaGAGAACCAAATGCCTTGAAGCTGTGGGTCACGGC +
Preference number: 6 (lower is better)
Translates to: LHQHQCEQFQSH*RTKCLEAVGHG
Trigger: GCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTGCTCACATTGATGCTGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp AGGCAGGAAGCTGTAAAACAAGCTTTCCTTCCTGGCTaGAGGTGCCTCTTGGGATTCAGTTGCCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: RQEAVKQAFLPG*RCLLGFSCLHL
Trigger: AAGATGAAGGCAACTGAATCCCAAGAGGCACCTGCAGCCAGGAAGGAAAGCTTGTTTTACAGCTTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460180.1
CDS CCA 72 bp TCAAGTCCACCCAGAGAGCTTTTTCTTTCCGTGTGTTaGAACGCAGTGTTGACAACTTCCTGGCCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: SSPPRELFLSVC*NAVLTTSWPSS
Trigger: ACTGGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACACACGGAAAGAAAAAGCTCTCTGGGTGGACTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000467588.1
ENST00000682167.1
CDS CAA 72 bp GTGAGCAATTTCAGTCCCATTGAAGAACCAAATGCCTaGAAGCTGTGGGTCACGGCCACTGCTTACAACCAG +
Preference number: 6 (lower is better)
Translates to: VSNFSPIEEPNA*KLWVTATAYNQ
Trigger: CTGGTTGTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp TTCAAGTCCACCCAGAGAGCTTTTTCTTTCCGTGTGTaGGAACGCAGTGTTGACAACTTCCTGGCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FKSTQRAFSFRV*ERSVDNFLAFQ
Trigger: CTGGAAGGCCAGGAAGTTGTCAACACTGCGTTCCAACACACGGAAAGAAAAAGCTCTCTGGGTGGACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000467588.1
ENST00000682167.1
CDS CAA 90 bp AGCATCAATGTGAGCAATTTCAGTCCCATTGAAGAACCAAATGCCTaGAAGCTGTGGGTCACGGCCACTGCTTACAACCAGGCAAACCAG +
Preference number: 6 (lower is better)
Translates to: SINVSNFSPIEEPNA*KLWVTATAYNQANQ
Trigger: CTGGTTTGCCTGGTTGTAAGCAGTGGCCGTGACCCACAGCTTCAAGGCATTTGGTTCTTCAATGGGACTGAAATTGCTCACATTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp CAGAGAAAGGCGAGTGTCTCTCCTTCCCACACAACTTaGTGCTTGTTCTTGGTAGACATGACCACACTTCTT +
Preference number: 6 (lower is better)
Translates to: QRKASVSPSHTT*CLFLVDMTTLL
Trigger: AAGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp ACATCCAAGTTTCATCTGGATCCTGAATCCATTCCGTaGCCTCACAGAACAGCTGACCCTGATCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: TSKFHLDPESIP*PHRTADPDLRT
Trigger: AGTCCTCAGATCAGGGTCAGCTGTTCTGTGAGGCAACGGAATGGATTCAGGATCCAGATGAAACTTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp ACAGAGAAAGGCGAGTGTCTCTCCTTCCCACACAACTaGCTGCTTGTTCTTGGTAGACATGACCACACTTCT +
Preference number: 6 (lower is better)
Translates to: TEKGECLSFPHN*LLVLGRHDHTS
Trigger: AGAAGTGTGGTCATGTCTACCAAGAACAAGCAGCAAGTTGTGTGGGAAGGAGAGACACTCGCCTTTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp ATGGCCACTTCTCTGTGCTCAGTCACATTTTCGGTCCAGTACACTTaGGAGACACGTACCTTACTTCCTGTGGGCTTGAGTTTCAATTCT +
Preference number: 6 (lower is better)
Translates to: MATSLCSVTFSVQYT*ETRTLLPVGLSFNS
Trigger: AGAATTGAAACTCAAGCCCACAGGAAGTAAGGTACGTGTCTCCAAAGTGTACTGGACCGAAAATGTGACTGAGCACAGAGAAGTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp TCATTCTTCAGGCCCAGGACTCCACCAGCATCAATGTaGGCAATTTCAGTCCCATTGAAGAACCAAATGCCT +
Preference number: 6 (lower is better)
Translates to: SFFRPRTPPASM*AISVPLKNQMP
Trigger: AGGCATTTGGTTCTTCAATGGGACTGAAATTGCTCACATTGATGCTGGTGGAGTCCTGGGCCTGAAGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp GACAGGTCAAAGGTGTTGGTTAACATCACTTGCGGCTaGCGGCTCATCAGACTAACTTGTAAACTTGACTCC +
Preference number: 6 (lower is better)
Translates to: DRSKVLVNITCG*RLIRLTCKLDS
Trigger: GGAGTCAAGTTTACAAGTTAGTCTGATGAGCCGTCAGCCGCAAGTGATGTTAACCAACACCTTTGACCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp AGAAAGAAAGATGCCACATATGAGATGCCTGCCATTTaGGCCAGCACAGTCCTTTTTCGTCCCAATAGTGTC +
Preference number: 6 (lower is better)
Translates to: RKKDATYEMPAI*ASTVLFRPNSV
Trigger: GACACTATTGGGACGAAAAAGGACTGTGCTGGCCCAAATGGCAGGCATCTCATATGTGGCATCTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256652.8
ENST00000682167.1
CDS CCA 72 bp GCCAATGCTGACTGGGTAACCTTCAGCTCTAAACAGTaGTCCTTTCTGAACTGTTACTTCTCTCTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: ANADWVTFSSKQ*SFLNCYFSLAN
Trigger: ATTGGCCAGAGAGAAGTAACAGTTCAGAAAGGACCACTGTTTAGAGCTGAAGGTTACCCAGTCAGCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS GCA 72 bp GCATCATGGACTAGGAGTTGTGAACGAAATAAAGACTaGGACACTTTCGTCTTCTTTTGGAACCGGGATAGG +
Preference number: 6 (lower is better)
Translates to: ASWTRSCERNKD*DTFVFFWNRDR
Trigger: CCTATCCCGGTTCCAAAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTCACAACTCCTAGTCCATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp GGTCTGCTTTTTGGTGATGAACATCCAAGTTTCATCTaGATCCTGAATCCATTCCGTTGCCTCACAGAACAG +
Preference number: 6 (lower is better)
Translates to: GLLFGDEHPSFI*ILNPFRCLTEQ
Trigger: CTGTTCTGTGAGGCAACGGAATGGATTCAGGATCCAGATGAAACTTGGATGTTCATCACCAAAAAGCAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 90 bp GTTGACTTGAAAATCTTTCACTGCTGGCTGGATCCTCAGAGTGGTTaGATCGGTCTGCTTTTTGGTGATGAACATCCAAGTTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: VDLKIFHCWLDPQSG*IGLLFGDEHPSFIW
Trigger: CCAGATGAAACTTGGATGTTCATCACCAAAAAGCAGACCGATCAAACCACTCTGAGGATCCAGCCAGCAGTGAAAGATTTTCAAGTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp AAATCTTTCACTGCTGGCTGGATCCTCAGAGTGGTTTaGTCGGTCTGCTTTTTGGTGATGAACATCCAAGTT +
Preference number: 6 (lower is better)
Translates to: KSFTAGWILRVV*SVCFLVMNIQV
Trigger: AACTTGGATGTTCATCACCAAAAAGCAGACCGATCAAACCACTCTGAGGATCCAGCCAGCAGTGAAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp CTACTTCACACTGATACACTCCTGTCTCTTCCTCAGTaGCATCATGGACTAGGAGTTGTGAACGAAATAAAG +
Preference number: 6 (lower is better)
Translates to: LLHTDTLLSLPQ*HHGLGVVNEIK
Trigger: CTTTATTTCGTTCACAACTCCTAGTCCATGATGCCACTGAGGAAGAGACAGGAGTGTATCAGTGTGAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CAA 72 bp AAAATCTTTCACTGCTGGCTGGATCCTCAGAGTGGTTaGATCGGTCTGCTTTTTGGTGATGAACATCCAAGT +
Preference number: 6 (lower is better)
Translates to: KIFHCWLDPQSG*IGLLFGDEHPS
Trigger: ACTTGGATGTTCATCACCAAAAAGCAGACCGATCAAACCACTCTGAGGATCCAGCCAGCAGTGAAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp ATATCAGTGTTGGAGTTGATGGAGAGCTCTTGGACTTaGCTCCTTGAATTCACTTTTAGCTTGCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: ISVLELMESSWT*LLEFTFSLLSG
Trigger: ACCAGAGAGCAAGCTAAAAGTGAATTCAAGGAGTCAAGTCCAAGAGCTCTCCATCAACTCCAACACTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS CCA 72 bp GAACGAAATAAAGACTGCGACACTTTCGTCTTCTTTTaGAACCGGGATAGGAAATTCCCCCATTCAATAGTG +
Preference number: 6 (lower is better)
Translates to: ERNKDCDTFVFF*NRDRKFPHSIV
Trigger: CACTATTGAATGGGGGAATTTCCTATCCCGGTTCCAAAAGAAGACGAAAGTGTCGCAGTCTTTATTTCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1
CDS TCA 72 bp GTGGAAACAGGAGAAAAATACCAAATAATGGCTAACTaGAGGTTTCCATTGGACCGGGACAAGATGCTACAT +
Preference number: 6 (lower is better)
Translates to: VETGEKYQIMAN*RFPLDRDKMLH
Trigger: ATGTAGCATCTTGTCCCGGTCCAATGGAAACCTTCAGTTAGCCATTATTTGGTATTTTTCTCCTGTTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256652.8
ENST00000369470.1
ENST00000682167.1