Pregenerated sensors for CCT8 (Homo sapiens)
Ensembl gene IDs: ENSG00000156261Ensembl transcript IDs: ENST00000432178.5, ENST00000480359.1, ENST00000481059.5, ENST00000494296.1, ENST00000496121.5, ENST00000540844.5, ENST00000626972.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGCTATTGAAACAAGTCACCTTGAGTCAGGAATTCCAGAGCTGTaGCAAAAACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTTC | + |
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Preference number: 1 (lower is better) Translates to: IAIETSHLESGIPEL*QKHWKSSPGVGSTF Trigger: GAAAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAATTCCTGACTCAAGGTGACTTGTTTCAATAGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| 3UTR TCA 72 bp | GAAACAAGTCACCTTGAGTCAGGAATTCCAGAGCTGTaGCAAAAACACTGGAAATCTAGTCCAGGTGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ETSHLESGIPEL*QKHWKSSPGVG Trigger: GCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAATTCCTGACTCAAGGTGACTTGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS-3UTR GCA 90 bp | TTCCAGAGCTGTGACAAAAACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTCCCACCAGCTGGTTTTaGCATGATGATCTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQSCDKNTGNLVQVLAALPTSWF*HDDLIH Trigger: GTGGATCAGATCATCATGGCAAAACCAGCTGGTGGG...AAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS-3UTR TCA 90 bp | TTCCAGAGCTGTGACAAAAACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTGGAATTCCAGAGCTGTaGCAAAAACACTGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: FQSCDKNTGNLVQVLAALGIPEL*QKHWKS Trigger: AGATTTCCAGTGTTTTTGTCACAGCTCTGGAATTCC...AAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS-3UTR TCA 90 bp | AACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTTCAGTAAAAATTAAGCCATTTGCCATGATGATCTaGTCCACTCTAAGTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NTGNLVQVLAALSVKIKPFAMMI*STLSTV Trigger: CACTGTACTTAGAGTGGATCAGATCATCATGGCAAA...TGGCTTAATTTTTACTGAAAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS GCA 90 bp | TGCCGCCGATCCCTCGGCCTTCTCCCGGTCGCGGAAGAAGAGAAGTaGCCGCAGGCTCCGGTGGCCGAGCCCTTCCAAAATCACCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: CRRSLGLLPVAEEEK*PQAPVAEPFQNHLP Trigger: AGGGAGGTGATTTTGGAAGGGCTCGGCCACCGGAGCCTGCGGGCACTTCTCTTCTTCCGCGACCGGGAGAAGGCCGAGGGATCGGCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494296.1 |
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| CDS CCA 90 bp | CGCGGAGGAAGCGAGGAGCACGCACAGCCTTCTGGGAAAGCAGCGTaGGGCCGCCTCACGCTCTTCCTGGCTCTCCAATTAGCCCACCCT | + |
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Preference number: 5 (lower is better) Translates to: RGGSEEHAQPSGKAA*GRLTLFLALQLAHP Trigger: AGGGTGGGCTAATTGGAGAGCCAGGAAGAGCGTGAGGCGGCCCCACGCTGCTTTCCCAGAAGGCTGTGCGTGCTCCTCGCTTCCTCCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540844.5 |
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| CDS GCA 90 bp | CGCGGCTTCACATCCGTCCACCTTCAAGGTGTACAATGTCGATCGTaGCGCCGATCCCTCGGCCTTCTCCCGGTCGCGGAAGAAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RGFTSVHLQGVQCRS*RRSLGLLPVAEEEK Trigger: CTTCTCTTCTTCCGCGACCGGGAGAAGGCCGAGGGATCGGCGGCACGATCGACATTGTACACCTTGAAGGTGGACGGATGTGAAGCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494296.1 ENST00000626972.2 |
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| CDS TCA 90 bp | CTTCCTGGCTCTCCAATTAGCCCACCCTTTCCCTGCCGCCAGGTCTaGAGCATCGCGAGAAGAGCAACCTCTGTGGCCAGAACCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LPGSPISPPFPCRQV*SIARRATSVARTKL Trigger: CAGCTTGGTTCTGGCCACAGAGGTTGCTCTTCTCGCGATGCTTCAGACCTGGCGGCAGGGAAAGGGTGGGCTAATTGGAGAGCCAGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540844.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGCTGTGACAAAAACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTTTGAAACAAGTCACCTaGAGTCAGGAATTCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: FQSCDKNTGNLVQVLAALLKQVT*SQEFQS Trigger: GCTCTGGAATTCCTGACTCAAGGTGACTTGTTTCAA...AAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGAGCTGTGACAAAAACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTAATCTAGTCCAGGTGTaGGCAGCACTTTCAGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: FQSCDKNTGNLVQVLAALNLVQV*AALSVK Trigger: TTTTACTGAAAGTGCTGCCAACACCTGGACTAGATT...AAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTTTTTGTCACAGCTCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS CCA 90 bp | CCATGTCACATTCCTTTGACAATGGATTTTAACTCAGAACATGTCTaGATTGCAATGAACACTAAGGCCAGGAAGCTGATTCCTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: PCHIPLTMDFNSEHV*IAMNTKARKLIPDS Trigger: AGAGTCAGGAATCAGCTTCCTGGCCTTAGTGTTCATTGCAATCCAGACATGTTCTGAGTTAAAATCCATTGTCAAAGGAATGTGACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480359.1 ENST00000496121.5 |
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| CDS-3UTR CAA 90 bp | AACACTGGAAATCTAGTCCAGGTGTTGGCAGCACTTTCAGTAAAAATTAAGCCAGCATTAGTAGCGAGTTaGATAGCCCAATATTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: NTGNLVQVLAALSVKIKPALVAS*IAQYFP Trigger: GGGAAAATATTGGGCTATCAAACTCGCTACTAATGC...TGGCTTAATTTTTACTGAAAGTGCTGCCAACACCTGGACTAGATTTCCAGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432178.5 |
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| CDS CCA 72 bp | AGACCGCGGAGGAAGCGAGGAGCACGCACAGCCTTCTaGGAAAGCAGCGTGGGGCCGCCTCACGCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPRRKRGARTAF*ESSVGPPHALP Trigger: AGGAAGAGCGTGAGGCGGCCCCACGCTGCTTTCCCAGAAGGCTGTGCGTGCTCCTCGCTTCCTCCGCGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540844.5 |
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| CDS GCA 72 bp | TCCCTCGGCCTTCTCCCGGTCGCGGAAGAAGAGAAGTaGCCGCAGGCTCCGGTGGCCGAGCCCTTCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SLGLLPVAEEEK*PQAPVAEPFQN Trigger: ATTTTGGAAGGGCTCGGCCACCGGAGCCTGCGGGCACTTCTCTTCTTCCGCGACCGGGAGAAGGCCGAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494296.1 |
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| CDS GCA 72 bp | ACATCCGTCCACCTTCAAGGTGTACAATGTCGATCGTaGCGCCGATCCCTCGGCCTTCTCCCGGTCGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSVHLQGVQCRS*RRSLGLLPVAE Trigger: TTCCGCGACCGGGAGAAGGCCGAGGGATCGGCGGCACGATCGACATTGTACACCTTGAAGGTGGACGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494296.1 ENST00000626972.2 |
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| CDS CCA 72 bp | CCTTTAAGGGTGACGGGCCTTAGCCCCATTTACGGATaGAGGCAAAACGCACGCGCGGCTTCACATCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLRVTGLSPIYG*RQNARAASHPS Trigger: GGACGGATGTGAAGCCGCGCGTGCGTTTTGCCTCCATCCGTAAATGGGGCTAAGGCCCGTCACCCTTAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494296.1 |
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| CDS TCA 72 bp | TCTCCAATTAGCCCACCCTTTCCCTGCCGCCAGGTCTaGAGCATCGCGAGAAGAGCAACCTCTGTGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SPISPPFPCRQV*SIARRATSVAR Trigger: TCTGGCCACAGAGGTTGCTCTTCTCGCGATGCTTCAGACCTGGCGGCAGGGAAAGGGTGGGCTAATTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540844.5 |
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| CDS TCA 72 bp | CATTCCTTCCTCAGGGTCTTTGTACTAGTTAGTCCCTaGGCCTGGCATTTCCCCCTAAGTAAGAGGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: HSFLRVFVLVSP*AWHFPLSKRSG Trigger: CCCCGACCTCTTACTTAGGGGGAAATGCCAGGCTCAGGGACTAACTAGTACAAAGACCCTGAGGAAGGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481059.5 |
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| CDS CAA 72 bp | CCTCTTCTAATCCTGAAAAGTGCATTCTTCCTTTCTTaGGTAAGCTTCAGCCCTACAACGCGCGGCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: PLLILKSAFFLS*VSFSPTTRGFT Trigger: TGTGAAGCCGCGCGTTGTAGGGCTGAAGCTTACCAAAGAAAGGAAGAATGCACTTTTCAGGATTAGAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626972.2 |
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| CDS TCA 72 bp | AGGAACCTGTATACCAGCCCCCATGTCACATTCCTTTaGCAATGGATTTTAACTCAGAACATGTCTGGATTG | + |
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Preference number: 6 (lower is better) Translates to: RNLYTSPHVTFL*QWILTQNMSGL Trigger: CAATCCAGACATGTTCTGAGTTAAAATCCATTGTCAAAGGAATGTGACATGGGGGCTGGTATACAGGTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000480359.1 ENST00000496121.5 |
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| CDS CAA 72 bp | GAGGAACCTGTATACCAGCCCCCATGTCACATTCCTTaGACAATGGATTTTAACTCAGAACATGTCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: EEPVYQPPCHIP*TMDFNSEHVWI Trigger: AATCCAGACATGTTCTGAGTTAAAATCCATTGTCAAAGGAATGTGACATGGGGGCTGGTATACAGGTTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000480359.1 ENST00000496121.5 |
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| CDS CAA 72 bp | CCTCTTCTAATCCTGAAAAGTGCATTCTTCCTTTCTTaGGTAAGCTTCAGCCCTACAACCTGTTGTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLLILKSAFFLS*VSFSPTTCCCC Trigger: ACAACAACAACAGGTTGTAGGGCTGAAGCTTACCAAAGAAAGGAAGAATGCACTTTTCAGGATTAGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481059.5 |
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| CDS CAA 90 bp | CAAATTAAAGAGGAACCTGTATACCAGCCCCCATGTCACATTCCTTaGACAATGGATTTTAACTCAGAACATGTCTGGATTGCAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: QIKEEPVYQPPCHIP*TMDFNSEHVWIAMN Trigger: GTTCATTGCAATCCAGACATGTTCTGAGTTAAAATCCATTGTCAAAGGAATGTGACATGGGGGCTGGTATACAGGTTCCTCTTTAATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000480359.1 ENST00000496121.5 |
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