Pregenerated sensors for CCT6A (Homo sapiens)
Ensembl gene IDs: ENSG00000146731Ensembl transcript IDs: ENST00000275603.9, ENST00000335503.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACACTTGCCCTTTACAGTTaGAGCTCTCTCAACTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTLALYS*SSLNSL Trigger: AAGGGAGTTGAGAGAGCTGCAACTGTAAAGGGCAAG...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| 3UTR-3UTR GCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACATCATCTTTTTACCTCTaGCTGTTCTTGCCCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTSSFYL*LFLPFT Trigger: TGTAAAGGGCAAGAACAGGCAGAGGTAAAAAGATGA...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| 3UTR-3UTR CAA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACATCGTGGAAACGTAATTaGGGTGAGAAAAATATGACG | + |
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Preference number: 3 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTSWKRN*GEKNMT Trigger: CGTCATATTTTTCTCACCCAAATTACGTTTCCACGA...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR CCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACAAGAGCCGGCGCGGCGTaGCCGGGAGGAACTATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTRAGAA*PGGTIR Trigger: CCGGATAGTTCCTCCCGGCCACGCCGCGCCGGCTCT...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR CCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACAAAAAGTCGGCCCGTCTaGCCGGCCCCCAGCGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTKSRPV*PAPSVP Trigger: GGGCACGCTGGGGGCCGGCCAGACGGGCCGACTTTT...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000335503.3 |
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| CDS-3UTR GCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACAGGAAACGATGCTGAGTaGCCAGAGCCGGCGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTGNDAE*PEPARR Trigger: ACGCCGCGCCGGCTCTGGGCACTCAGCATCGTTTCC...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR TCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACAAAAAGGAAACGATGCTaGGTGCCCAGAGCCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTKRKRC*VPRAGA Trigger: CGCGCCGGCTCTGGGCACTCAGCATCGTTTCCTTTT...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR TCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACAACTTCAGGCCACTGCTaGCATCCCAAAACACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTTSGHC*HPKTQP Trigger: AGGCTGTGTTTTGGGATGTCAGCAGTGGCCTGAAGT...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR CCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACATTCTGCTGCCACCATTaGCTCACCTGTGTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTFCCHH*LTCVQV Trigger: GACCTGAACACAGGTGAGCCAATGGTGGCAGCAGAA...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR GCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACATGCGCAGAGCAACTATaGCTTCTTTTGAAAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTCAEQL*LLLKEH Trigger: ATGCTCTTTCAAAAGAAGGCATAGTTGCTCTGCGCA...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR GCA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACACAACTTAACATTTATTaGACAACTCACTTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTQLNIY*TTHFRP Trigger: TGGCCTGAAGTGAGTTGTGCAATAAATGTTAAGTTG...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000275603.9 ENST00000335503.3 |
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| CDS-3UTR CAA 90 bp | CTTAACATTTATTGCACAACTCACTTCAGGCCACTGCTGACATCCCAAAACACATGTTGGGTGTTGAATTaGCATTTCGTGAAGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LNIYCTTHFRPLLTSQNTCWVLN*HFVKQH Trigger: GTGCTGCTTCACGAAATGCAAATTCAACACCCAACA...TGTGTTTTGGGATGTCAGCAGTGGCCTGAAGTGAGTTGTGCAATAAATGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275603.9 |
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