Pregenerated sensors for CCT4 (Homo sapiens)
Ensembl gene IDs: ENSG00000115484Ensembl transcript IDs: ENST00000394440.8, ENST00000461370.1, ENST00000544079.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTATTTTTGTTTTAACTaGGCAGCCTCCCAAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKYFCFN*AASQAK Trigger: TTTGGCTTGGGAGGCTGCCCAGTTAAAACAAAAATA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| 3UTR-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGATATTTTTGTTTTAACTaGGCAGCCTCCCAAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VYTFICRRNPTQQSLLLGYFCFN*AASQAK Trigger: TTTGGCTTGGGAGGCTGCCCAGTTAAAACAAAAATA...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCAGAAATAACAGAATGTaGGGAGAAGATAAATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MLVVFKAREHLSVMSILGRNNRM*GEDKSA Trigger: GGCAGATTTATCTTCTCCCAACATTCTGTTATTTCT...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGAGAAATAACAGAATGTaGGGAGAAGATAAATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWRNNRM*GEDKSA Trigger: GGCAGATTTATCTTCTCCCAACATTCTGTTATTTCT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTACGCCCCGCTCCGGGGTaGCACATTCTCGGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELRPAPG*HILGHG Trigger: GCCATGCCCGAGAATGTGGCACCCCGGAGCGGGGCG...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGACTCGGGAAGGACGGATaGACCCGGATTCTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGLGKDG*TRILAG Trigger: GCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAG...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGCTCGGGAAGGACGGATaGACCCGGATTCTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWLGKDG*TRILAG Trigger: GCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAG...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGCCGCTGTGTCTGGGTTaGCTCGGGAAGGACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKPLCLG*LGKDGW Trigger: CCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGG...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGACGGCGGAAATGTTGCTaGAGCGGATCTGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGRRKCC*SGSGLA Trigger: AGCCAGCCCAGATCCGCTTCAGCAACATTTCCGCCG...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTACCGCTGTGTCTGGGTTaGCTCGGGAAGGACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELPLCLG*LGKDGW Trigger: CCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGG...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTTGCTGAAGCGGATCTaGGCTGGCTTGTCGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKLLKRI*AGLSRS Trigger: GGACCGCGACAAGCCAGCCCAGATCCGCTTCAGCAA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGCGGCGGAAATGTTGCTaGAGCGGATCTGGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWRRKCC*SGSGLA Trigger: AGCCAGCCCAGATCCGCTTCAGCAACATTTCCGCCG...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCAGCAATGATGACTACTaGTGTGGTGCCATCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGSNDDY*CGAISC Trigger: GCAGGAGATGGCACCACATCAGTAGTCATCATTGCT...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCCAGGGCCTTCTGGAATaGCTCAGAAATGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGQGLLE*LRNDGW Trigger: CCAACCATCATTTCTGAGTCATTCCAGAAGGCCCTG...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAGAAGCGGATCTGGGCTaGCTTGTCGCGGTCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGEADLG*LVAVLI Trigger: TATCAGGACCGCGACAAGCCAGCCCAGATCCGCTTC...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATTGCTGAAGCGGATCTaGGCTGGCTTGTCGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELLLKRI*AGLSRS Trigger: GGACCGCGACAAGCCAGCCCAGATCCGCTTCAGCAA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCCCGAACAGTTTCAGTTaGAAGAGTCAGAGCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGPNSFS*KSQSTD Trigger: GTCAGTGCTCTGACTCTTGCAACTGAAACTGTTCGG...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGAAACTCCGCTGTGTCTaGGTTGGCTCGGGAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWKLRCV*VGSGRT Trigger: CGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGCCACATTCTCGGGCATaGCAAACTCCGCTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKPHSRA*QTPLCL Trigger: CAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGG...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAGCGGATCTGGGCTaGCTTGTCGCGGTCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWEADLG*LVAVLI Trigger: TATCAGGACCGCGACAAGCCAGCCCAGATCCGCTTC...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGAGTCAGAGCACTGACTaGTACCAACAGAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKSQSTD*YQQRLD Trigger: GTCCAGCCTCTGTTGGTATCAGTCAGTGCTCTGACT...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCTGTGGTGCCATCTCCTaGTTCTATATCTTGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGCGAIS*FYILSL Trigger: AAGGCTCAAGATATAGAAGCAGGAGATGGCACCACA...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGCCACATTCTCGGGCATaGCAAACTCCGCTGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWPHSRA*QTPLCL Trigger: CAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGG...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGACCTGCTTCTATATCTTaGGCCTTAGACAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGPASIS*ALDSST Trigger: GGTGGAGCTGTCTAAGGCTCAAGATATAGAAGCAGG...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGCAGGGCCTTCTGGAATaGCTCAGAAATGATGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKQGLLE*LRNDGW Trigger: CCAACCATCATTTCTGAGTCATTCCAGAAGGCCCTG...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCAGCAGACTTGAATACTaGGAAACCACCTTTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGSRLEY*ETTFEF Trigger: GAACTCAAAGGTGGTTTCTCAGTATTCAAGTCTGCT...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTTGACACTTTTTGGGTaGGAACCAGCCCTTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKLTLFG*EPALPP Trigger: TGGTGGAAGGGCTGGTTCTCACCCAAAAAGTGTCAA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGCAAGAGTCAGAGCACTaGCTGATACCAACAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKQESEH*LIPTEA Trigger: AGCCTCTGTTGGTATCAGTCAGTGCTCTGACTCTTG...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTAACGGTAAGCCCTCACTaGCTTCACGAACCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELTVSPH*LHEPSR Trigger: TCTGGAAGGTTCGTGAAGGCAGTGAGGGCTTACCGT...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGACGGTAAGCCCTCACTaGCTTCACGAACCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWTVSPH*LHEPSR Trigger: TCTGGAAGGTTCGTGAAGGCAGTGAGGGCTTACCGT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGACTACACTGGTGGCTGTaGCTGGGTCAATCACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGLHWWL*LGQSLS Trigger: TGAAAGTGATTGACCCAGCCACAGCCACCAGTGTAG...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCGTTCCTCCAAAATGTTaGAAATACCACCCTTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGVPPKC*KYHPFG Trigger: TCCGAAAGGGTGGTATTTCCAACATTTTGGAGGAAC...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGAGCAATGATGACTACTaGTGTGGTGCCATCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWSNDDY*CGAISC Trigger: GCAGGAGATGGCACCACATCAGTAGTCATCATTGCT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATTGACACTTTTTGGGTaGGAACCAGCCCTTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELLTLFG*EPALPP Trigger: TGGTGGAAGGGCTGGTTCTCACCCAAAAAGTGTCAA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTAACTGGTGGCTGTGGCTaGGTCAATCACTTTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELTGGCG*VNHFHH Trigger: GTGATGAAAGTGATTGACCCAGCCACAGCCACCAGT...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGACTGGTGGCTGTGGCTaGGTCAATCACTTTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWTGGCG*VNHFHH Trigger: GTGATGAAAGTGATTGACCCAGCCACAGCCACCAGT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCTATTTTTGTTTTAACTaGGCAGCCTCCCAAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: MLVVFKAREHLSVMSILGYFCFN*AASQAK Trigger: TTTGGCTTGGGAGGCTGCCCAGTTAAAACAAAAATA...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTGTGGTGCCATCTCCTaGTTCTATATCTTGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKCGAIS*FYILSL Trigger: AAGGCTCAAGATATAGAAGCAGGAGATGGCACCACA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTTTTCTCCCTGGGCATaGCGGTTTCTTAGTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKFSPWA*RFLSSV Trigger: AACAGAACTAAGAAACCGGCATGCCCAGGGAGAAAA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTACCGAACAGTTTCAGTTaGAAGAGTCAGAGCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELPNSFS*KSQSTD Trigger: GTCAGTGCTCTGACTCTTGCAACTGAAACTGTTCGG...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAGAATTTGACACTTTTTaGGTGAGAACCAGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGEFDTF*VRTSPS Trigger: GGAAGGGCTGGTTCTCACCCAAAAAGTGTCAAATTC...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTTGACACTTTTTaGGTGAGAACCAGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKEFDTF*VRTSPS Trigger: GGAAGGGCTGGTTCTCACCCAAAAAGTGTCAAATTC...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAATAGGGCATCATGAATaGAGCGCTCAGCTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGIGHHE*SAQLLQ Trigger: TTGAAGAAGCTGAGCGCTCCATTCATGATGCCCTAT...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGATAGGGCATCATGAATaGAGCGCTCAGCTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKIGHHE*SAQLLQ Trigger: TTGAAGAAGCTGAGCGCTCCATTCATGATGCCCTAT...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTACAGTCAAGATTTCAATaGCCTTTTCCAGGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELQSRFQ*PFPGPS Trigger: AGAAGGCCCTGGAAAAGGGCATTGAAATCTTGACTG...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR GCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGTTTTCTCCCTGGGCATaGCGGTTTCTTAGTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWFSPWA*RFLSSV Trigger: AACAGAACTAAGAAACCGGCATGCCCAGGGAGAAAA...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR TCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGAGCAGACTTGAATACTaGGAAACCACCTTTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWSRLEY*ETTFEF Trigger: GAACTCAAAGGTGGTTTCTCAGTATTCAAGTCTGCT...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGTTCCTCCAAAATGTTaGAAATACCACCCTTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWVPPKC*KYHPFG Trigger: TCCGAAAGGGTGGTATTTCCAACATTTTGGAGGAAC...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATATTTTTGTTTTAACTaGGCAGCCTCCCAAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELYFCFN*AASQAK Trigger: TTTGGCTTGGGAGGCTGCCCAGTTAAAACAAAAATA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGATTGAGTTCAGTGAAGTaGTTGCACTATTTAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VYTFICRRNPTQQSLLLGLSSVK*LHYLTK Trigger: CTTTGTTAAATAGTGCAACCACTTCACTGAACTCAA...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATTGAGTTCAGTGAAGTaGTTGCACTATTTAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LFAEGIQHSSHYYWEKELLSSVK*LHYLTK Trigger: CTTTGTTAAATAGTGCAACCACTTCACTGAACTCAA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 90 bp | GCTCCGGGGTGCCACATTCTCGGGCATGGCAAACTCCGCTGTGTCTaGGTTGGCTCGGGAAGGACGGATGGACCCGGATTCTGGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: APGCHILGHGKLRCV*VGSGRTDGPGFWPA Trigger: GGCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGGCACCCCGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 90 bp | GGGGTGCCACATTCTCGGGCATGGCAAACTCCGCTGTGTCTGGGTTaGCTCGGGAAGGACGGATGGACCCGGATTCTGGCCGGCCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GVPHSRAWQTPLCLG*LGKDGWTRILAGRS Trigger: ACTGCGGCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGGCACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS GCA 90 bp | ACCCGGATTCTGGCCGGCCGCAGTGTAATAACGGTAAGCCCTCACTaGCTTCACGAACCTTCCAGAAAGCGGCGCCGGCGTCGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRILAGRSVITVSPH*LHEPSRKRRRRREE Trigger: CTCCTCCCGACGCCGGCGCCGCTTTCTGGAAGGTTCGTGAAGGCAGTGAGGGCTTACCGTTATTACACTGCGGCCGGCCAGAATCCGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 90 bp | GCATGGCAAACTCCGCTGTGTCTGGGTTGGCTCGGGAAGGACGGATaGACCCGGATTCTGGCCGGCCGCAGTGTAATAACGGTAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AWQTPLCLGWLGKDG*TRILAGRSVITVSP Trigger: AGGGCTTACCGTTATTACACTGCGGCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCTTGGCGGCGGAAATGTaGCTGAAGCGGATCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MLVVFKAREHLSVMSILGLAAEM*LKRIWA Trigger: AGCCCAGATCCGCTTCAGCAACATTTCCGCCGCCAA...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS TCA 90 bp | AAGCGTCAGATCCCTAGTGAAGACTGCATGCAATCCTCGGCATTTTaGACTGCTTTCGGCTCCAATATGAATGATGCACAGTGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KRQIPSEDCMQSSAF*TAFGSNMNDAQCRM Trigger: CATCCTGCACTGTGCATCATTCATATTGGAGCCGAAAGCAGTTCAAAATGCCGAGGATTGCATGCAGTCTTCACTAGGGATCTGACGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461370.1 |
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| CDS-3UTR CAA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGTCCGCTGTGTCTGGGTaGGCTCGGGAAGGACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWSAVSG*AREGRM Trigger: CATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGA...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATCCGCTGTGTCTGGGTaGGCTCGGGAAGGACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFAEGIQHSSHYYWEKELSAVSG*AREGRM Trigger: CATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTTGGCGGCGGAAATGTaGCTGAAGCGGATCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKLAAEM*LKRIWA Trigger: AGCCCAGATCCGCTTCAGCAACATTTCCGCCGCCAA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGCATCAGCAACCGCTTaGGCGGCGGAAATGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWASATA*AAEMLL Trigger: CAGCAACATTTCCGCCGCCAAAGCGGTTGCTGATGC...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCACTGAGAAACCACCTTaGAGTTCAGTGAAGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MLVVFKAREHLSVMSILGTEKPP*SSVKWL Trigger: CAACCACTTCACTGAACTCAAAGGTGGTTTCTCAGT...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS TCA 90 bp | CATGCAATCCTCGGCATTTTGAACTGCTTTCGGCTCCAATATGAATaGTGCACAGTGCAGGATGAAAAACTAAGGGAGATTAAGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HAILGILNCFRLQYE*CTVQDEKLREIKMQ Trigger: TTGCATCTTAATCTCCCTTAGTTTTTCATCCTGCACTGTGCATCATTCATATTGGAGCCGAAAGCAGTTCAAAATGCCGAGGATTGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461370.1 |
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| CDS-3UTR CAA 90 bp | ATGTTGGTAGTTTTTAAGGCCAGGGAGCATTTATCAGTGATGAGCATATTGGGCCATGTCAGCAGTAAATaGGTCAATATGAGCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: MLVVFKAREHLSVMSILGHVSSK*VNMSNW Trigger: CCAGTTGCTCATATTGACCAATTTACTGCTGACATG...GCCCAATATGCTCATCACTGATAAATGCTCCCTGGCCTTAAAAACTACCAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGACTGAGAAACCACCTTaGAGTTCAGTGAAGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKTEKPP*SSVKWL Trigger: CAACCACTTCACTGAACTCAAAGGTGGTTTCTCAGT...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAGTTCCTCCAAAATGTaGGAAATACCACCCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VYTFICRRNPTQQSLLLGSSSKM*EIPPFR Trigger: CCGAAAGGGTGGTATTTCCAACATTTTGGAGGAACT...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGTTGGAGAAAGCAGACTaGAATACTGAGAAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKLEKAD*NTEKPP Trigger: AGGTGGTTTCTCAGTATTCAAGTCTGCTTTCTCCAA...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGCATGTCAGCAGTAAATaGGTCAATATGAGCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFAEGIQHSSHYYWEKHVSSK*VNMSNW Trigger: CCAGTTGCTCATATTGACCAATTTACTGCTGACATG...CTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTAAGTTCCTCCAAAATGTaGGAAATACCACCCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFAEGIQHSSHYYWEKELSSSKM*EIPPFR Trigger: CCGAAAGGGTGGTATTTCCAACATTTTGGAGGAACT...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | ATGTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGTTGGAGAAAGCAGACTaGAATACTGAGAAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: MYTLLFAEGIQHSSHYYWLEKAD*NTEKPP Trigger: AGGTGGTTTCTCAGTATTCAAGTCTGCTTTCTCCAA...CCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | GTATACACTTTTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGATCTTCAATCACCAGTTaGTTAGAACCACGAACAACA | + |
|
Preference number: 5 (lower is better) Translates to: VYTFICRRNPTQQSLLLGSSITS*LEPRTT Trigger: TGTTGTTCGTGGTTCTAACAAACTGGTGATTGAAGA...TCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAAAAGTGTATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGCAGAAGGAATCCAACACAGCAGTCATTATTACTGGGAAAAGGAATTATCTTCAATCACCAGTTaGTTAGAACCACGAACAACA | + |
|
Preference number: 5 (lower is better) Translates to: LFAEGIQHSSHYYWEKELSSITS*LEPRTT Trigger: TGTTGTTCGTGGTTCTAACAAACTGGTGATTGAAGA...TAATTCCTTTTCCCAGTAATAATGACTGCTGTGTTGGATTCCTTCTGCAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CAA 90 bp | CGGGGTGCCACATTCTCGGGCATGGCAAACTCCGCTGTGTCTGGGTaGGCTCGGGAAGGACGGATGGACCCGGATTCTGGCCGGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGATFSGMANSAVSG*AREGRMDPDSGRPQ Trigger: CTGCGGCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGGCACCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 72 bp | CAGTCGCCCCGCTCCGGGGTGCCACATTCTCGGGCATaGCAAACTCCGCTGTGTCTGGGTTGGCTCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QSPRSGVPHSRA*QTPLCLGWLGK Trigger: CTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGGCACCCCGGAGCGGGGCGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS GCA 72 bp | CTGGCCGGCCGCAGTGTAATAACGGTAAGCCCTCACTaGCTTCACGAACCTTCCAGAAAGCGGCGCCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LAGRSVITVSPH*LHEPSRKRRRR Trigger: ACGCCGGCGCCGCTTTCTGGAAGGTTCGTGAAGGCAGTGAGGGCTTACCGTTATTACACTGCGGCCGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 72 bp | ACTCCGCTGTGTCTGGGTTGGCTCGGGAAGGACGGATaGACCCGGATTCTGGCCGGCCGCAGTGTAATAACG | + |
|
Preference number: 6 (lower is better) Translates to: TPLCLGWLGKDG*TRILAGRSVIT Trigger: CGTTATTACACTGCGGCCGGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CCA 72 bp | CATTCTCGGGCATGGCAAACTCCGCTGTGTCTGGGTTaGCTCGGGAAGGACGGATGGACCCGGATTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSRAWQTPLCLG*LGKDGWTRILA Trigger: GGCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CAA 72 bp | TCCCTCCACTGGGCTGCTTCTTTGGCGGCGGAAATGTaGCTGAAGCGGATCTGGGCTGGCTTGTCGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLHWAASLAAEM*LKRIWAGLSRS Trigger: GGACCGCGACAAGCCAGCCCAGATCCGCTTCAGCAACATTTCCGCCGCCAAAGAAGCAGCCCAGTGGAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461370.1 |
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| CDS CCA 72 bp | TGCCACATTCTCGGGCATGGCAAACTCCGCTGTGTCTaGGTTGGCTCGGGAAGGACGGATGGACCCGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: CHILGHGKLRCV*VGSGRTDGPGF Trigger: GAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS CAA 72 bp | ACATTCTCGGGCATGGCAAACTCCGCTGTGTCTGGGTaGGCTCGGGAAGGACGGATGGACCCGGATTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TFSGMANSAVSG*AREGRMDPDSG Trigger: GCCAGAATCCGGGTCCATCCGTCCTTCCCGAGCCAACCCAGACACAGCGGAGTTTGCCATGCCCGAGAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394440.8 ENST00000544079.2 |
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| CDS TCA 72 bp | TCCACTGGGCTGCTTCTTTGGCGGCGGAAATGTTGCTaGAGCGGATCTGGGCTGGCTTGTCGCGGTCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: STGLLLWRRKCC*SGSGLACRGPD Trigger: ATCAGGACCGCGACAAGCCAGCCCAGATCCGCTTCAGCAACATTTCCGCCGCCAAAGAAGCAGCCCAGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461370.1 |
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| CDS TCA 72 bp | ATCCCTAGTGAAGACTGCATGCAATCCTCGGCATTTTaGACTGCTTTCGGCTCCAATATGAATGATGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: IPSEDCMQSSAF*TAFGSNMNDAQ Trigger: CTGTGCATCATTCATATTGGAGCCGAAAGCAGTTCAAAATGCCGAGGATTGCATGCAGTCTTCACTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461370.1 |
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