RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163468

Ensembl transcript IDs: ENST00000295688.8, ENST00000368256.3, ENST00000368258.7, ENST00000368259.6, ENST00000368261.7, ENST00000368262.7, ENST00000413555.5, ENST00000415548.1, ENST00000446905.5, ENST00000463132.5, ENST00000472765.6, ENST00000478640.6, ENST00000489870.1, ENST00000490221.5, ENST00000496684.6, ENST00000533194.5

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGAAGGGAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTaGATCAGGGTACGAGGAATGACCTCTAGGGCCTGGGCAACAGCC +
Preference number: 1 (lower is better)
Translates to: ARREVSRRMVLAPQF*IRVRGMTSRAWATA
Trigger: GGCTGTTGCCCAGGCCCTAGAGGTCATTCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTCCCTTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp CAACAGGCCTGCTCCTGTTCCAACATCATCTTCTCTCAGTTCCTCTaGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATT +
Preference number: 1 (lower is better)
Translates to: QQACSCSNIIFSQFL*SADYPGPTGSSNAI
Trigger: AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGAACAGGAGCAGGCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp TCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTTTGTaGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTC +
Preference number: 1 (lower is better)
Translates to: SGAPPCRLWSSPFFL*PETMSSIRSSRTAV
Trigger: GACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCCACAAAAAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR GCA 90 bp GTGATGACCACATCGGGCTTCAGTTGGATAATGTCCTCACAGAGCTaGTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCC +
Preference number: 1 (lower is better)
Translates to: VMTTSGFSWIMSSQS*WMYSSSIWRIRVKS
Trigger: GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGATGTGGTCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp GCAAGAATAATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGG +
Preference number: 1 (lower is better)
Translates to: ARIITDVVPSPTSSS*VRLISIMDLAAGCW
Trigger: CCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp GATCATATCATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTaGGTGCATCTGCTGCTCCAGGAAGTGCTCAGCTACAGACAGCAT +
Preference number: 1 (lower is better)
Translates to: DHIIQCLAVSTDHHC*VHLLLQEVLSYRQH
Trigger: ATGCTGTCTGTAGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGATGATATGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp ATGACCACATCGGGCTTCAGTTGGATAATGTCCTCACAGAGCTGCTaGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: MTTSGFSWIMSSQSC*MYSSSIWRIRVKSS
Trigger: GGAGGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGATGTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp ATCCAGCAGCACAATGCGAGGGTTCTTGATATAGCGCCGCATACGTaGATGGGTCACATCCTTGTTAATCATGACTCCACGCAAGACACA +
Preference number: 1 (lower is better)
Translates to: IQQHNARVLDIAPHT*MGHILVNHDSTQDT
Trigger: TGTGTCTTGCGTGGAGTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAACCCTCGCATTGTGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp TGGATAATGTCCTCACAGAGCTGCTGGATGTACTCTTCCTCCATCTaGAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCA +
Preference number: 1 (lower is better)
Translates to: WIMSSQSCWMYSSSI*RIRVKSSSRVISMS
Trigger: TGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp AAATCTGAGATGCCCTTTTCAGTGATGACCACATCGGGCTTCAGTTaGATAATGTCCTCACAGAGCTGCTGGATGTACTCTTCCTCCATC +
Preference number: 1 (lower is better)
Translates to: KSEMPFSVMTTSGFS*IMSSQSCWMYSSSI
Trigger: GATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGATGTGGTCATCACTGAAAAGGGCATCTCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR TCA 90 bp CTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCAAAGATaGCCACCGACTGATGGCTTTGGTAGTAATAGAGCTGTTGATGAT +
Preference number: 1 (lower is better)
Translates to: LYHLDSIQGNVASQR*PPTDGFGSNRAVDD
Trigger: ATCATCAACAGCTCTATTACTACCAAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR TCA 90 bp TTATGTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTaGCAGCATCCAGGGCAATGTTGCAAGCCAAAGATGACCACCGAC +
Preference number: 1 (lower is better)
Translates to: LCQSLSDHSPQTVPS*QHPGQCCKPKMTTD
Trigger: GTCGGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 90 bp CTGGATGCTGGACTTGAATCTCTCGAAGAATGGCATTGCCATCATTaGTCATCACAATGCCTCCCATTGGGTCCAAAAGCATCTTCATCA +
Preference number: 1 (lower is better)
Translates to: LDAGLESLEEWHCHH*SSQCLPLGPKASSS
Trigger: TGATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGATGACCAATGATGGCAATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR TCA 90 bp CGGATGATATCTGCAATAGTCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: RMISAIVLAALMFPD*TFLPDSRFVFWPKE
Trigger: TTCCTTTGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATATCATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR TCA 90 bp GCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCGTTCCTCTGGTCGGCTaGCTATCCGGGCCCCACAGG +
Preference number: 2 (lower is better)
Translates to: ALTPGQHQEPRLAGSGHRVPLVG*LSGPHR
Trigger: CCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAAC...GCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp GCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCGTTGGGTGCATCTGCTaGTCCAGGAAGTGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ALTPGQHQEPRLAGSGHRVGCIC*SRKCSA
Trigger: AGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAAC...GCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTGGCATTGCCATCATTaGTCATCACAATGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: HSLLASIRSPALPALVIAWHCHH*SSQCLP
Trigger: TGGGAGGCATTGTGATGACCAATGATGGCAATGCCA...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR TCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTCAACCTGATCCCTTCTaGACAAAGACGTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: LLASIRSPALPALVIAFLQPDPF*TKTSTV
Trigger: CACTGTGGACGTCTTTGTTCAGAAGGGATCAGGTTG...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTATAGCGCCGCATACGTaGATGGGTCACATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSIAPHT*MGHILV
Trigger: AACAAGGATGTGACCCATCCACGTATGCGGCGCTAT...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTGTCTTTTGGAAAACTaGGCTGGGACAGAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSCLLEN*AGTERD
Trigger: GTCCCTTTCTGTCCCAGCTCAGTTTTCCAAAAGACA...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CAA 90 bp GCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTTaGTGGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: ASGAPPCRLWSSPFF*WPETMSSIRSSRTA
Trigger: GGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCCACAAAAAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTTGCTGCTCCAGGAAGTaGTCAGCTACAGACAGCATT +
Preference number: 2 (lower is better)
Translates to: QFLWSADYPGPTGSSNAICCSRK*SATDSI
Trigger: AATGCTGTCTGTAGCTGAGCACTTCCTGGAGCAGCA...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTTCCTCACAGAGCTGCTaGATGTACTCTTCCTCCATC +
Preference number: 2 (lower is better)
Translates to: QFLWSADYPGPTGSSNAISSQSC*MYSSSI
Trigger: GATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGA...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTTTTCTTTAGGGTGCTaGTCATATCATCCAATGCCT +
Preference number: 2 (lower is better)
Translates to: LLASIRSPALPALVIAFLFSLGC*SYHPMP
Trigger: AGGCATTGGATGATATGATCAGCACCCTAAAGAAAA...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp ATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCCAATGCGAGGGTTCTTaGTATAGCGCCGCATACGTG +
Preference number: 2 (lower is better)
Translates to: MRLLSVFRTLRMAVILARQCEGS*YSAAYV
Trigger: CACGTATGCGGCGCTATATCAAGAACCCTCGCATTG...GCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTCATCCAGGGCAATGTTaGAAGCCAAAGATGACCACC +
Preference number: 2 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSHPGQC*KPKMTT
Trigger: GGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATG...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTATGTCCTCACAGAGCTaGTGGATGTACTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSMSSQS*WMYSSS
Trigger: GGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACAT...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp TGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGTTTCGATCATGGACTTaGCCGCTGGATGCTGGACTT +
Preference number: 2 (lower is better)
Translates to: CLPDSADGCDIGPHKVVLFRSWT*PLDAGL
Trigger: AAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAA...CAGCACTACCTTATGCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGGTTGCAAGCCAAAGATaGCCACCGACTGATGGCTTT +
Preference number: 2 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLVASQR*PPTDGF
Trigger: AAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAAC...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGACTTGCATGGCATCCTaGAGGTTGCGTTCTACTTCC +
Preference number: 2 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLTCMAS*RLRSTS
Trigger: GGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGT...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCGTTGCAAGCCAAAGATaGCCACCGACTGATGGCTTT +
Preference number: 2 (lower is better)
Translates to: CMASWRLRSTSERISLLAVASQR*PPTDGF
Trigger: AAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAAC...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp ATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCCAAACTGTACCATCTTaGCAGCATCCAGGGCAATGT +
Preference number: 2 (lower is better)
Translates to: MRLLSVFRTLRMAVILARQTVPS*QHPGQC
Trigger: ACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTG...GCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATC +
Preference number: 2 (lower is better)
Translates to: CMASWRLRSTSERISLLAPTSSS*VRLISI
Trigger: GATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGG...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCCGCCGCATACGTGGATaGGTCACATCCTTGTTAATC +
Preference number: 2 (lower is better)
Translates to: CMASWRLRSTSERISLLARRIRG*VTSLLI
Trigger: GATTAACAAGGATGTGACCCATCCACGTATGCGGCG...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTACTCTTCCTCCATCTaGAGAATTCGGGTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLYSSSI*RIRVKS
Trigger: GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTA...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGATGTTCGGATGATATCTaGAATAGTCTTGGCAGCATT +
Preference number: 2 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGCSDDI*NSLGSI
Trigger: AATGCTGCCAAGACTATTGCAGATATCATCCGAACA...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR GCA 90 bp CATGACTCCACGCAAGACACAGGAGTCTTCAATGATGCCTCCAGGTATCTTTTCATCACCACTGTTGGGTaGATCTGCTGCTCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: HDSTQDTGVFNDASRYLFITTVG*ICCSRK
Trigger: CTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGAT...GAAAAGATACCTGGAGGCATCATTGAAGACTCCTGTGTCTTGCGTGGAGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCACGCTTTGTGTTCTaGCCAAAGGAAGACAATGGA +
Preference number: 2 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLSRFVF*PKEDNG
Trigger: TCCATTGTCTTCCTTTGGCCAGAACACAAAGCGTGA...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CCA 90 bp ATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCTCTTCATCATGGACTTaGGTCCCAAACATGTTCGGA +
Preference number: 2 (lower is better)
Translates to: MRLLSVFRTLRMAVILARSSSWT*VPNMFG
Trigger: TCCGAACATGTTTGGGACCCAAGTCCATGATGAAGA...GCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CCA 90 bp CGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAACATGGACTTGGCCGCTaGATGCTGGACTTGAATCTC +
Preference number: 2 (lower is better)
Translates to: RPFSSNCTILTASRAMLQHGLGR*MLDLNL
Trigger: GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATG...TTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTTTTTCTTTAGGGTGCTaGTCATATCATCCAATGCCT +
Preference number: 2 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSFSLGC*SYHPMP
Trigger: AGGCATTGGATGATATGATCAGCACCCTAAAGAAAA...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GTTCTTGATATAGCGCCGCATACGTGGATGGGTCACATCCTTGTTAATCATGACACTGATCACCACTGTTaGGTGCATCTGCTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VLDIAPHTWMGHILVNHDTDHHC*VHLLLQ
Trigger: CTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGT...GTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCATAGCGCCGCATACGTaGATGGGTCACATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: ENSGEVLLSCNLNVSLAFIAPHT*MGHILV
Trigger: AACAAGGATGTGACCCATCCACGTATGCGGCGCTAT...GAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCCAAACTGTACCATCTTaGCAGCATCCAGGGCAATGT +
Preference number: 2 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSQTVPS*QHPGQC
Trigger: ACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTG...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCGAATCTCTCGAAGAATaGCATTGCCATCATTGGTCA +
Preference number: 2 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSESLEE*HCHHWS
Trigger: TGACCAATGATGGCAATGCCATTCTTCGAGAGATTC...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CCA 90 bp GTTCTTGATATAGCGCCGCATACGTGGATGGGTCACATCCTTGTTAATCATGACCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATC +
Preference number: 2 (lower is better)
Translates to: VLDIAPHTWMGHILVNHDPTSSS*VRLISI
Trigger: GATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGG...GTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR TCA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGTGTCTTTTGGAAAACTaGGCTGGGACAGAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQCLLEN*AGTERD
Trigger: GTCCCTTTCTGTCCCAGCTCAGTTTTCCAAAAGACA...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CCA 90 bp GCTGATCATATCATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGAAAGCATCTTCATCATaGACTTGGGTCCCAAACATG +
Preference number: 2 (lower is better)
Translates to: ADHIIQCLAVSTDHHCWVKASSS*TWVPNM
Trigger: CATGTTTGGGACCCAAGTCCATGATGAAGATGCTTT...CACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGATGATATGATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CCA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCCACAATGCCTCCCATTaGGTCCAAAAGCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSHNASH*VQKHLH
Trigger: ATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTG...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR CAA 90 bp TTTATGTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTaGACAGCATCCAGGGCAATGTTGCAAGCCAAAGATGACCACCGA +
Preference number: 2 (lower is better)
Translates to: FMSISFRPFSSNCTI*TASRAMLQAKDDHR
Trigger: TCGGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR GCA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGCATTGGTCATCACAATaGCTCCCATTGGGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: SIISLSLMSTGILIFFRVHWSSQ*LPLGPK
Trigger: TTTTGGACCCAATGGGAGGCATTGTGATGACCAATG...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CAA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTCTCCTGGGTGTGCTaGGCCCGAAGGGAGGTAAGT +
Preference number: 3 (lower is better)
Translates to: HSLLASIRSPALPALVIAFSWVC*ARREVS
Trigger: ACTTACCTCCCTTCGGGCCAAGCACACCCAGGAGAA...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp CTGTGCATTGAAGTAGCCTTGCCTAGCACTCACTCCTaGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: LCIEVALPSTHS*PASGAPPCRLW
Trigger: CCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGGCAAGGCTACTTCAATGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp GCCTTGCCTAGCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCAACATTGCGACACACTaGCATGGCATCCTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: ALPSTHSWPASGAPPCRLNIATH*HGILEV
Trigger: AACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTT...GAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTATGGCATCCTGGAGGTaGCGTTCTACTTCCGAGAGA +
Preference number: 3 (lower is better)
Translates to: LLASIRSPALPALVIAFLMASWR*RSTSER
Trigger: TCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCAT...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTGGATGGGTCACATCCTaGTTAATCATGACTCCACGC +
Preference number: 3 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSGWVTS*LIMTPR
Trigger: GCGTGGAGTCATGATTAACAAGGATGTGACCCATCC...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTaGATCAGGGTACGAGGAATGACCTCTAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: EVSRRMVLAPQF*IRVRGMTSRAW
Trigger: CCAGGCCCTAGAGGTCATTCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTGCATCCAGGGCAATGTaGCAAGCCAAAGATGACCAC +
Preference number: 3 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSASRAM*QAKDDH
Trigger: GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGC...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp ATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTaGGTGCATCTGCTGCTCCAGGAAGTGCTCAGCTAC +
Preference number: 3 (lower is better)
Translates to: IQCLAVSTDHHC*VHLLLQEVLSY
Trigger: GTAGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTGTAGTAATAGAGCTGTaGATGATGTTCAGCATCATA +
Preference number: 3 (lower is better)
Translates to: LLASIRSPALPALVIAFLVVIEL*MMFSII
Trigger: TATGATGCTGAACATCATCAACAGCTCTATTACTAC...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR TCA 72 bp CCAGAGAAGAATCCAGCAGCACAATGCGAGGGTTCTTaGTATAGCGCCGCATACGTGGATGGGTCACATCCT +
Preference number: 3 (lower is better)
Translates to: PEKNPAAQCEGS*YSAAYVDGSHP
Trigger: AGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAACCCTCGCATTGTGCTGCTGGATTCTTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTCGCTGGATGCTGGACTaGAATCTCTCGAAGAATGGC +
Preference number: 3 (lower is better)
Translates to: SRRTLRHTCMASWRLRSTRWMLD*NLSKNG
Trigger: GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCG...AGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp CGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTATTTCGATCATGGACTaGGCCGCTGGATGCTGGACT +
Preference number: 3 (lower is better)
Translates to: RHTCMASWRLRSTSERISISIMD*AAGCWT
Trigger: AGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAAT...AGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp CTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTaGATGCTGGACTTGAATCTCTCGAAGAATGGCATT +
Preference number: 3 (lower is better)
Translates to: LGPANFDHGLGR*MLDLNLSKNGI
Trigger: AATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp ATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCCGCT +
Preference number: 3 (lower is better)
Translates to: ITDVVPSPTSSS*VRLISIMDLAA
Trigger: AGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp TCCTCACAGAGCTGCTGGATGTACTCTTCCTCCATCTaGAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATC +
Preference number: 3 (lower is better)
Translates to: SSQSCWMYSSSI*RIRVKSSSRVI
Trigger: GATTACACGAGAGGAGGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp TCGGGCTTCAGTTGGATAATGTCCTCACAGAGCTGCTaGATGTACTCTTCCTCCATCTGGAGAATTCGGGTG +
Preference number: 3 (lower is better)
Translates to: SGFSWIMSSQSC*MYSSSIWRIRV
Trigger: CACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTCTAGCAATGCGATTATaGTCTGTCTTCCGGACTCTG +
Preference number: 3 (lower is better)
Translates to: SRRTLRHTCMASWRLRSTLAMRL*SVFRTL
Trigger: CAGAGTCCGGAAGACAGACAATAATCGCATTGCTAG...AGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR GCA 72 bp ACATCGGGCTTCAGTTGGATAATGTCCTCACAGAGCTaGTGGATGTACTCTTCCTCCATCTGGAGAATTCGG +
Preference number: 3 (lower is better)
Translates to: TSGFSWIMSSQS*WMYSSSIWRIR
Trigger: CCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp GGCATTGCCATCATTGGTCATCACAATGCCTCCCATTaGGTCCAAAAGCATCTTCATCATGGACTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: GIAIIGHHNASH*VQKHLHHGLGS
Trigger: GGACCCAAGTCCATGATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGATGACCAATGATGGCAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR CCA 72 bp CACAATGCGAGGGTTCTTGATATAGCGCCGCATACGTaGATGGGTCACATCCTTGTTAATCATGACTCCACG +
Preference number: 3 (lower is better)
Translates to: HNARVLDIAPHT*MGHILVNHDST
Trigger: CGTGGAGTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAACCCTCGCATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTaGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTG +
Preference number: 3 (lower is better)
Translates to: SRRTLRHTCMAS*RLRSTSERISL
Trigger: CAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp GAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCTTAATGGCATTGCCATCATaGGTCATCACAATGCCTCCC +
Preference number: 3 (lower is better)
Translates to: ETMSSIRSSRTAVSTAVLMALPS*VITMPP
Trigger: GGGAGGCATTGTGATGACCAATGATGGCAATGCCAT...TAAGACAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CAA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTCACATCGGGCTTCAGTaGGATAATGTCCTCACAGAG +
Preference number: 3 (lower is better)
Translates to: THLHGILEVAFYFRENLFHIGLQ*DNVLTE
Trigger: CTCTGTGAGGACATTATCCAACTGAAGCCCGATGTG...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp ATGCCCTTTTCAGTGATGACCACATCGGGCTTCAGTTaGATAATGTCCTCACAGAGCTGCTGGATGTACTCT +
Preference number: 3 (lower is better)
Translates to: MPFSVMTTSGFS*IMSSQSCWMYS
Trigger: AGAGTACATCCAGCAGCTCTGTGAGGACATTATCCAACTGAAGCCCGATGTGGTCATCACTGAAAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGTCACAATGCCTCCCATaGGGTCCAAAAGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQSQCLP*GPKASS
Trigger: TGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGA...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR TCA 72 bp TCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTaGCAGCATCCAGGGCAATGTTGCAAGCCAAAGATG +
Preference number: 3 (lower is better)
Translates to: SLSDHSPQTVPS*QHPGQCCKPKM
Trigger: CATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CCA 72 bp GGACTTGAATCTCTCGAAGAATGGCATTGCCATCATTaGTCATCACAATGCCTCCCATTGGGTCCAAAAGCA +
Preference number: 3 (lower is better)
Translates to: GLESLEEWHCHH*SSQCLPLGPKA
Trigger: TGCTTTTGGACCCAATGGGAGGCATTGTGATGACCAATGATGGCAATGCCATTCTTCGAGAGATTCAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CAA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGATTTCGATCATGGACTaGGCCGCTGGATGCTGGACT +
Preference number: 3 (lower is better)
Translates to: SIISLSLMSTGILIFFRVISIMD*AAGCWT
Trigger: AGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAAT...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR-3UTR CAA 90 bp AACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCAAAGATGACCACATTGATGTTTCCAGATaGAACTTTTCTTCCGGATTC +
Preference number: 3 (lower is better)
Translates to: NCTILTASRAMLQAKDDHIDVSR*NFSSGF
Trigger: GAATCCGGAAGAAAAGTTCAATCTGGAAACATCAAT...GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR-3UTR CAA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGATATCTGCAATAGTCTaGGCAGCATTGATGTTTCCA +
Preference number: 3 (lower is better)
Translates to: SIISLSLMSTGILIFFRVISAIV*AALMFP
Trigger: TGGAAACATCAATGCTGCCAAGACTATTGCAGATAT...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR TCA 90 bp GCCTTGCCTAGCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCGTTCCTCTGGTCGGCTaGCTATCCGGGCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ALPSTHSWPASGAPPCRLVPLVG*LSGPHR
Trigger: CCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAAC...GAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGGCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCCCTAGCACTCACTCCTaGCCAGCATCAGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HSLLASIRSPALPALVIAPSTHS*PASGAP
Trigger: CGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGG...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTCAGGAGCCCCGCCTTaGCGGCTCTGGTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSSGAPP*RLWSSP
Trigger: AGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGA...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTGAGCACGAGCACTaGACGATGGCCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: ALTPGQHQEPRLAGSGHRLEHEH*TMAHHG
Trigger: GCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAAG...GCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTACGAGCACTGGACGATaGCCCATCATGGCGACGCGA +
Preference number: 4 (lower is better)
Translates to: LLASIRSPALPALVIAFLTSTGR*PIMATR
Trigger: TCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGT...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTCCGGGTACCCAGAGCTaGGGGAACCGGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: QFLWSADYPGPTGSSNAIPGTQS*GNRQNL
Trigger: AAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGG...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTTCTCTCAGTTCCTCTaGTCGGCTGACTATCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLASIRSPALPALVIAFLFSQFL*SADYPG
Trigger: GCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAA...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTCTGGCCCCACAGTTCTaGATCAGGGTACGAGGAATG +
Preference number: 4 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSLAPQF*IRVRGM
Trigger: CATTCCTCGTACCCTGATCCAGAACTGTGGGGCCAG...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTGTCTTTTGGAAAACTaGGCTGGGACAGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: HSLLASIRSPALPALVIACLLEN*AGTERD
Trigger: GTCCCTTTCTGTCCCAGCTCAGTTTTCCAAAAGACA...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCACATCGGGCTTCAGTTaGATAATGTCCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: HSLLASIRSPALPALVIATSGFS*IMSSQS
Trigger: GCTCTGTGAGGACATTATCCAACTGAAGCCCGATGT...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTACATTGCGACACACTTaGATGGCATCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLASIRSPALPALVIAFLTLRHT*MASWRL
Trigger: CAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGT...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTCAGTTCTCCTGGGTGTaGTTGGCCCGAAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QFLWSADYPGPTGSSNAIQFSWV*LARREV
Trigger: TACCTCCCTTCGGGCCAAGCACACCCAGGAGAACTG...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTCCGGGTACCCAGAGCTaGGGGAACCGGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSPGTQS*GNRQNL
Trigger: AAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGG...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATTGTCACGAGCACTGGACGATaGCCCATCATGGCGACGCGA +
Preference number: 4 (lower is better)
Translates to: LWSADYPGPTGSSNAIIVTSTGR*PIMATR
Trigger: TCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGT...GACAATAATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTCCTAGCACTCACTCCTaGCCAGCATCAGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSPSTHS*PASGAP
Trigger: CGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGG...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTGGCATTGCCATCATTaGTCATCACAATGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSWHCHH*SSQCLP
Trigger: TGGGAGGCATTGTGATGACCAATGATGGCAATGCCA...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTCGCCTTTCTTTTTGTaGCCTGAAACGATGTCATCA +
Preference number: 4 (lower is better)
Translates to: HSLLASIRSPALPALVIASPFFL*PETMSS
Trigger: TGATGACATCGTTTCAGGCCACAAAAAGAAAGGCGA...GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp TGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGCATCTGCTGCTCCAGGAATCAGGGTACGAGGAATaGCCTCTAGGGCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CLAVSTDHHCWVHLLLQESGYEE*PLGPGQ
Trigger: TTGCCCAGGCCCTAGAGGTCATTCCTCGTACCCTGA...TTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATCACCACTGTTGGGTaGATCTGCTGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QFLWSADYPGPTGSSNAIITTVG*ICCSRK
Trigger: CTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGAT...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGACTGGCCCCACAGTTCTaGATCAGGGTACGAGGAATG +
Preference number: 4 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGLAPQF*IRVRGM
Trigger: CATTCCTCGTACCCTGATCCAGAACTGTGGGGCCAG...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGGTTGAGCACGAGCACTaGACGATGGCCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: CLPDSADGCDIGPHKVVLVEHEH*TMAHHG
Trigger: GCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAAC...CAGCACTACCTTATGCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368258.7
CDS-3UTR TCA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTGCAAGAATAATTACTaGTGTGGTCCCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLASIRSPALPALVIAFLCKNNY*CGPISN
Trigger: GTTGGAGATGGGACCACATCAGTAATTATTCTTGCA...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCAGGGTACGAGGAATaGCCTCTAGGGCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLSGYEE*PLGPGQ
Trigger: TTGCCCAGGCCCTAGAGGTCATTCCTCGTACCCTGA...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGAATGGCATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAG +
Preference number: 4 (lower is better)
Translates to: FDHGLGRWMLDLNLSKNGIMATR*RAGYPE
Trigger: CTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGAT...GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCTTATCAGGAGCCCCGCCTTaGCGGCTCTGGTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: ETMSSIRSSRTAVSTAVLSGAPP*RLWSSP
Trigger: AGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGA...TAAGACAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGGACGATGGCCCATCATaGCGACGCGATGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKDDGPS*RRDAEP
Trigger: CGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTC...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTGAATCTCTCGAAGAATaGCATTGCCATCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSESLEE*HCHHWS
Trigger: TGACCAATGATGGCAATGCCATTCTTCGAGAGATTC...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CAA 72 bp CACCAGCTGAGGGTCCAGGAGAACATTGCGACACACTaGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: HQLRVQENIATH*HGILEVAFYFR
Trigger: TCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCCTCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp ACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTTTTCTTTAGGGTGCTaGTCATATCATCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: TPGQHQEPRLAGSGHRLSFSLGC*SYHPMP
Trigger: AGGCATTGGATGATATGATCAGCACCCTAAAGAAAA...AGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp CATCATTGGTCATCACAATGCCTCCCATTGGGTCCAAAAGCATCTTCATCATGGGTTCCTCTGGTCGGCTaGCTATCCGGGCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HHWSSQCLPLGPKASSSWVPLVG*LSGPHR
Trigger: CCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAAC...CCATGATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGATGACCAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR GCA 90 bp GCCCCACAGGCTCTAGCAATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGATCACCACTGTTGGGTaGATCTGCTGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: APQALAMRLLSVFRTLRMITTVG*ICCSRK
Trigger: CTTCCTGGAGCAGCAGATGCACCCAACAGTGGTGAT...CATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGAACATTGCGACACACTTaGATGGCATCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGTLRHT*MASWRL
Trigger: CAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGT...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TCCAACATCATCTTCTCTCAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAACCGGCAGAACCTTCTaGAGAGAGAGAACCAGACAG +
Preference number: 4 (lower is better)
Translates to: SNIIFSQFLWSADYPGPTTGRTF*RERTRQ
Trigger: CTGTCTGGTTCTCTCTCTCCAGAAGGTTCTGCCGGT...TGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368258.7
CDS-3UTR CCA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCGACGATGGCCCATCATaGCGACGCGATGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSDDGPS*RRDAEP
Trigger: CGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTC...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGAATAGCGCCGCATACGTaGATGGGTCACATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGIAPHT*MGHILV
Trigger: AACAAGGATGTGACCCATCCACGTATGCGGCGCTAT...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATTGTCACTTGCATGGCATCCTaGAGGTTGCGTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: LWSADYPGPTGSSNAIIVTCMAS*RLRSTS
Trigger: GGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGT...GACAATAATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCGTAGACGGATGGTGCTaGCCCCACAGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: MRLLSVFRTLRMAVILARVDGWC*PHSSGS
Trigger: TGATCCAGAACTGTGGGGCCAGCACCATCCGTCTAC...GCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCCCGCCTTGCCGGCTCTaGTCATCGCCTTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GPANFDHGLGRWMLDLNLPPCRL*SSPFFL
Trigger: CAAAAAGAAAGGCGATGACCAGAGCCGGCAAGGCGG...GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CAA 72 bp ACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATaGTCTGTCTTCCGGACTCTGCGGATGGCTGTGATA +
Preference number: 4 (lower is better)
Translates to: TIRAPQALAMRL*SVFRTLRMAVI
Trigger: TATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp AACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCAAAGATGACCACATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAG +
Preference number: 4 (lower is better)
Translates to: NCTILTASRAMLQAKDDHIMATR*RAGYPE
Trigger: CTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGAT...GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TCCAACATCATCTTCTCTCAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACATGCTGCTCCAGGAAGTaGTCAGCTACAGACAGCATT +
Preference number: 4 (lower is better)
Translates to: SNIIFSQFLWSADYPGPTCCSRK*SATDSI
Trigger: AATGCTGTCTGTAGCTGAGCACTTCCTGGAGCAGCA...TGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGCAGTTCTCCTGGGTGTaGTTGGCCCGAAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKQFSWV*LARREV
Trigger: TACCTCCCTTCGGGCCAAGCACACCCAGGAGAACTG...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTTCTTCATCATGGACTTaGGTCCCAAACATGTTCGGA +
Preference number: 4 (lower is better)
Translates to: QFLWSADYPGPTGSSNAISSSWT*VPNMFG
Trigger: TCCGAACATGTTTGGGACCCAAGTCCATGATGAAGA...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGCATCTGCTGCTCCAGGAATTTCGATCATGGACTTaGCCGCTGGATGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: CLAVSTDHHCWVHLLLQEFRSWT*PLDAGL
Trigger: AAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAA...TTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCCCCACAGGCTCTAGCAATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGCGCCGCATACGTGGATaGGTCACATCCTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: APQALAMRLLSVFRTLRMRRIRG*VTSLLI
Trigger: GATTAACAAGGATGTGACCCATCCACGTATGCGGCG...CATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGAATGGCCCGCCTTGCCGGCTCTaGTCATCGCCTTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: FDHGLGRWMLDLNLSKNGPPCRL*SSPFFL
Trigger: CAAAAAGAAAGGCGATGACCAGAGCCGGCAAGGCGG...GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCCAATGCGAGGGTTCTTaGTATAGCGCCGCATACGTG +
Preference number: 4 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSQCEGS*YSAAYV
Trigger: CACGTATGCGGCGCTATATCAAGAACCCTCGCATTG...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTCTCGAAGAATGGCATTaGCATCATTGGTCATCACAA +
Preference number: 4 (lower is better)
Translates to: QFLWSADYPGPTGSSNAILEEWH*HHWSSQ
Trigger: TTGTGATGACCAATGATGGCAATGCCATTCTTCGAG...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGACACAATGCCTCCCATTaGGTCCAAAAGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGHNASH*VQKHLH
Trigger: ATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTG...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GGCCTGAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCCTCACAGAGCTGCTaGATGTACTCTTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLKRCHQFAVAELPSPLLSSQSC*MYSSSI
Trigger: GATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGA...CAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGACATCGGGCTTCAGTTaGATAATGTCCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: CLPDSADGCDIGPHKVVLTSGFS*IMSSQS
Trigger: GCTCTGTGAGGACATTATCCAACTGAAGCCCGATGT...CAGCACTACCTTATGCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCTGATCATATCATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGGTAGACGGATGGTGCTaGCCCCACAGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ADHIIQCLAVSTDHHCWVVDGWC*PHSSGS
Trigger: TGATCCAGAACTGTGGGGCCAGCACCATCCGTCTAC...CACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGATGATATGATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GCTGATCATATCATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGCAATGCGAGGGTTCTTaGTATAGCGCCGCATACGTG +
Preference number: 4 (lower is better)
Translates to: ADHIIQCLAVSTDHHCWVQCEGS*YSAAYV
Trigger: CACGTATGCGGCGCTATATCAAGAACCCTCGCATTG...CACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGATGATATGATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCTGCTGCTCCAGGAAGTaGTCAGCTACAGACAGCATT +
Preference number: 4 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSCCSRK*SATDSI
Trigger: AATGCTGTCTGTAGCTGAGCACTTCCTGGAGCAGCA...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCCATCCAGGGCAATGTTaGAAGCCAAAGATGACCACC +
Preference number: 4 (lower is better)
Translates to: CMASWRLRSTSERISLLAHPGQC*KPKMTT
Trigger: GGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATG...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTATGTCCTCACAGAGCTaGTGGATGTACTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRRTLRHTCMASWRLRSTMSSQS*WMYSSS
Trigger: GGAGGAAGAGTACATCCAGCAGCTCTGTGAGGACAT...AGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCGATTTCCAACAGGCCTaGTCCTGTTCCAACATCATC +
Preference number: 4 (lower is better)
Translates to: GPANFDHGLGRWMLDLNLDFQQA*SCSNII
Trigger: GATGATGTTGGAACAGGAGCAGGCCTGTTGGAAATC...GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TCCAACATCATCTTCTCTCAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACACACAATGCCTCCCATTaGGTCCAAAAGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SNIIFSQFLWSADYPGPTHNASH*VQKHLH
Trigger: ATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTG...TGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCATAGCGCCGCATACGTaGATGGGTCACATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CMASWRLRSTSERISLLAIAPHT*MGHILV
Trigger: AACAAGGATGTGACCCATCCACGTATGCGGCGCTAT...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGGTTGCAAGCCAAAGATaGCCACCGACTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKVASQR*PPTDGF
Trigger: AAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAAC...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp CGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTGTCTTTTGGAAAACTaGGCTGGGACAGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: RHTCMASWRLRSTSERISCLLEN*AGTERD
Trigger: GTCCCTTTCTGTCCCAGCTCAGTTTTCCAAAAGACA...AGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp AGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTGTTGGGTGCATCTGCTaGTCCAGGAAGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RIRVKSSSRVISMSVWLSVGCIC*SRKCSA
Trigger: AGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAAC...AGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTGATCATATCATCCAATaGCTTGCGGTAAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSDHIIQ*LAVSTD
Trigger: ATCAGTGCTTACCGCAAGGCATTGGATGATATGATC...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCAACTGCCGTCTCCACTaGTGTCTTATAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSNCRLH*CLISLQ
Trigger: CTGCAGACTTATAAGACAGCAGTGGAGACGGCAGTT...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCAACTGCCGTCTCCACTaGTGTCTTATAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CMASWRLRSTSERISLLANCRLH*CLISLQ
Trigger: CTGCAGACTTATAAGACAGCAGTGGAGACGGCAGTT...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTCATGGACTTGGCCGCTaGATGCTGGACTTGAATCTC +
Preference number: 4 (lower is better)
Translates to: THLHGILEVAFYFRENLFHGLGR*MLDLNL
Trigger: GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATG...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGTTTCGATCATGGACTTaGCCGCTGGATGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKFRSWT*PLDAGL
Trigger: AAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAA...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAACTGATCACCACTGTTaGGTGCATCTGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPFSSNCTILTASRAMLQTDHHC*VHLLLQ
Trigger: CTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGT...TTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGTTCTCTCAGTTCCTCTaGTCGGCTGACTATCCGGGC +
Preference number: 4 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQFSQFL*SADYPG
Trigger: GCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAA...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CAA 72 bp AGAACATTGCGACACACTTGCATGGCATCCTGGAGGTaGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCC +
Preference number: 4 (lower is better)
Translates to: RTLRHTCMASWR*RSTSERISLLA
Trigger: GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp AACCTCTTCATCCTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGTGCAAGAATAATTACTaGTGTGGTCCCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NLFILGPANFDHGLGRWMCKNNY*CGPISN
Trigger: GTTGGAGATGGGACCACATCAGTAATTATTCTTGCA...CATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTCACAGGAGTCTTCAATaGTGCCTCCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: SRRTLRHTCMASWRLRSTHRSLQ*CLQVSF
Trigger: AAAAGATACCTGGAGGCATCATTGAAGACTCCTGTG...AGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp CATGACTCCACGCAAGACACAGGAGTCTTCAATGATGCCTCCAGGTATCTTTTCCAACCTGATCCCTTCTaGACAAAGACGTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: HDSTQDTGVFNDASRYLFQPDPF*TKTSTV
Trigger: CACTGTGGACGTCTTTGTTCAGAAGGGATCAGGTTG...GAAAAGATACCTGGAGGCATCATTGAAGACTCCTGTGTCTTGCGTGGAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp AACCTCTTCATCCTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGGATCATATCATCCAATaGCTTGCGGTAAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: NLFILGPANFDHGLGRWMDHIIQ*LAVSTD
Trigger: ATCAGTGCTTACCGCAAGGCATTGGATGATATGATC...CATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCTTACATCCAGGGCAATGTTaGAAGCCAAAGATGACCACC +
Preference number: 4 (lower is better)
Translates to: ETMSSIRSSRTAVSTAVLHPGQC*KPKMTT
Trigger: GGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATG...TAAGACAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp AACCTCTTCATCCTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGAAAGCATCTTCATCATaGACTTGGGTCCCAAACATG +
Preference number: 4 (lower is better)
Translates to: NLFILGPANFDHGLGRWMKASSS*TWVPNM
Trigger: CATGTTTGGGACCCAAGTCCATGATGAAGATGCTTT...CATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATC +
Preference number: 4 (lower is better)
Translates to: TILLKLYHLDSIQGNVASPTSSS*VRLISI
Trigger: GATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGG...GCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCTTACGCCGCATACGTGGATaGGTCACATCCTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: ETMSSIRSSRTAVSTAVLRRIRG*VTSLLI
Trigger: GATTAACAAGGATGTGACCCATCCACGTATGCGGCG...TAAGACAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGTACTCTTCCTCCATCTaGAGAATTCGGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKYSSSI*RIRVKS
Trigger: GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTA...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CATGACTCCACGCAAGACACAGGAGTCTTCAATGATGCCTCCAGGTATCTTTTCTCCTCACAGAGCTGCTaGATGTACTCTTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: HDSTQDTGVFNDASRYLFSSQSC*MYSSSI
Trigger: GATGGAGGAAGAGTACATCCAGCAGCTCTGTGAGGA...GAAAAGATACCTGGAGGCATCATTGAAGACTCCTGTGTCTTGCGTGGAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGCCTTTCTTTTTGTaGCCTGAAACGATGTCATCA +
Preference number: 4 (lower is better)
Translates to: GPANFDHGLGRWMLDLNLSPFFL*PETMSS
Trigger: TGATGACATCGTTTCAGGCCACAAAAAGAAAGGCGA...GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTCACGCTTTGTGTTCTaGCCAAAGGAAGACAATGGA +
Preference number: 4 (lower is better)
Translates to: RHTCMASWRLRSTSERISSRFVF*PKEDNG
Trigger: TCCATTGTCTTCCTTTGGCCAGAACACAAAGCGTGA...AGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
3UTR CAA 72 bp TCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTaGCAAGCCAAAGATGACCACCGACTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SNCTILTASRAM*QAKDDHRLMAL
Trigger: CAAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GAAACGATGTCATCAATTCGCAGTAGCAGAACTGCCGTCTCCACTGCTGTCTTACAAACTGTACCATCTTaGCAGCATCCAGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: ETMSSIRSSRTAVSTAVLQTVPS*QHPGQC
Trigger: ACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTG...TAAGACAGCAGTGGAGACGGCAGTTCTGCTACTGCGAATTGATGACATCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp ACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCAAACTGTACCATCTTaGCAGCATCCAGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TILLKLYHLDSIQGNVASQTVPS*QHPGQC
Trigger: ACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTG...GCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTGTTCGGATGATATCTaGAATAGTCTTGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GPANFDHGLGRWMLDLNLCSDDI*NSLGSI
Trigger: AATGCTGCCAAGACTATTGCAGATATCATCCGAACA...GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR CCA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTTGGCATTGCCATCATTaGTCATCACAATGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: THLHGILEVAFYFRENLFWHCHH*SSQCLP
Trigger: TGGGAGGCATTGTGATGACCAATGATGGCAATGCCA...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GCCCCACAGGCTCTAGCAATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGATCTCAATGTCAGTCTaGCTTTCTCCTTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: APQALAMRLLSVFRTLRMISMSV*LSPFLY
Trigger: ATACAAGAAAGGAGAAAGCCAGACTGACATTGAGAT...CATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCGCCAAAGGAAGACAATaGAGGTGGTGCTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSAKGRQ*RWCSSE
Trigger: TTCTGATGAGCACCACCTCCATTGTCTTCCTTTGGC...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR TCA 90 bp GTTTCCAGATTGAACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCAAAGGACAACCTGATCCCTTCTaGACAAAGACGTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VSRLNFSSGFTLCVLAKGQPDPF*TKTSTV
Trigger: CACTGTGGACGTCTTTGTTCAGAAGGGATCAGGTTG...TCCTTTGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR GCA 90 bp CGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAACATTGGTCATCACAATaGCTCCCATTGGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RPFSSNCTILTASRAMLQHWSSQ*LPLGPK
Trigger: TTTTGGACCCAATGGGAGGCATTGTGATGACCAATG...TTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGGTTGGGTGCATCTGCTaGTCCAGGAAGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SIISLSLMSTGILIFFRVVGCIC*SRKCSA
Trigger: AGCTGAGCACTTCCTGGAGCAGCAGATGCACCCAAC...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp AACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCCAAAGATGACCACTCTTCATCATGGACTTaGGTCCCAAACATGTTCGGA +
Preference number: 4 (lower is better)
Translates to: NCTILTASRAMLQAKDDHSSSWT*VPNMFG
Trigger: TCCGAACATGTTTGGGACCCAAGTCCATGATGAAGA...GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp AGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTTACTCTTCCTCCATCTaGAGAATTCGGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RIRVKSSSRVISMSVWLSYSSSI*RIRVKS
Trigger: GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTA...AGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp GTTTCCAGATTGAACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCAAAGGAACTTGCATGGCATCCTaGAGGTTGCGTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: VSRLNFSSGFTLCVLAKGTCMAS*RLRSTS
Trigger: GGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGT...TCCTTTGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR TCA 90 bp CTTCATCATGGACTTGGGTCCCAAACATGTTCGGATGATATCTGCAATAGTCTTGTTGCAAGCCAAAGATaGCCACCGACTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LHHGLGSQTCSDDICNSLVASQR*PPTDGF
Trigger: AAAGCCATCAGTCGGTGGTCATCTTTGGCTTGCAAC...AAGACTATTGCAGATATCATCCGAACATGTTTGGGACCCAAGTCCATGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR TCA 90 bp GTTCTTGATATAGCGCCGCATACGTGGATGGGTCACATCCTTGTTAATCATGACCACAGGAGTCTTCAATaGTGCCTCCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: VLDIAPHTWMGHILVNHDHRSLQ*CLQVSF
Trigger: AAAAGATACCTGGAGGCATCATTGAAGACTCCTGTG...GTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGCATTGGTCATCACAATaGCTCCCATTGGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQHWSSQ*LPLGPK
Trigger: TTTTGGACCCAATGGGAGGCATTGTGATGACCAATG...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTAAAGCATCTTCATCATaGACTTGGGTCCCAAACATG +
Preference number: 4 (lower is better)
Translates to: THLHGILEVAFYFRENLFKASSS*TWVPNM
Trigger: CATGTTTGGGACCCAAGTCCATGATGAAGATGCTTT...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp CGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGAATCTCTCGAAGAATaGCATTGCCATCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPFSSNCTILTASRAMLQESLEE*HCHHWS
Trigger: TGACCAATGATGGCAATGCCATTCTTCGAGAGATTC...TTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp ATTGAACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCAAAGGAAGACAATGCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATC +
Preference number: 4 (lower is better)
Translates to: IELFFRIHALCSGQRKTMPTSSS*VRLISI
Trigger: GATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGG...CATTGTCTTCCTTTGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR CCA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGACTGATCACCACTGTTaGGTGCATCTGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIISLSLMSTGILIFFRVTDHHC*VHLLLQ
Trigger: CTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGT...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CCA 90 bp TGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTGCTAGCCATCTCAATGTCAGTCTaGCTTTCTCCTTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: CMASWRLRSTSERISLLAISMSV*LSPFLY
Trigger: ATACAAGAAAGGAGAAAGCCAGACTGACATTGAGAT...GGCTAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
3UTR CAA 72 bp ATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTaGACAGCATCCAGGGCAATGTTGCAAGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ISFRPFSSNCTI*TASRAMLQAKD
Trigger: ATCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTTTTCTTTAGGGTGCTaGTCATATCATCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: ENSGEVLLSCNLNVSLAFFSLGC*SYHPMP
Trigger: AGGCATTGGATGATATGATCAGCACCCTAAAGAAAA...GAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GTTCTTGATATAGCGCCGCATACGTGGATGGGTCACATCCTTGTTAATCATGACTCATATCACTGTCACTaGTGTCGACTGGGATACTTA +
Preference number: 4 (lower is better)
Translates to: VLDIAPHTWMGHILVNHDSYHCH*CRLGYL
Trigger: TAAGTATCCCAGTCGACATCAGTGACAGTGATATGA...GTCATGATTAACAAGGATGTGACCCATCCACGTATGCGGCGCTATATCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp CATGACTCCACGCAAGACACAGGAGTCTTCAATGATGCCTCCAGGTATCTTTTCTTTCTTTTTGTGGCCTaGAACGATGTCATCAATTCG +
Preference number: 4 (lower is better)
Translates to: HDSTQDTGVFNDASRYLFFLFVA*NDVINS
Trigger: CGAATTGATGACATCGTTTCAGGCCACAAAAAGAAA...GAAAAGATACCTGGAGGCATCATTGAAGACTCCTGTGTCTTGCGTGGAGTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR TCA 90 bp GAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTTTCTTTTTGTGGCCTaGAACGATGTCATCAATTCG +
Preference number: 4 (lower is better)
Translates to: ENSGEVLLSCNLNVSLAFFLFVA*NDVINS
Trigger: CGAATTGATGACATCGTTTCAGGCCACAAAAAGAAA...GAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGCTCGAAGAATGGCATTaGCATCATTGGTCATCACAA +
Preference number: 4 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQLEEWH*HHWSSQ
Trigger: TTGTGATGACCAATGATGGCAATGCCATTCTTCGAG...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR GCA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGGATTTCCAACAGGCCTaGTCCTGTTCCAACATCATC +
Preference number: 4 (lower is better)
Translates to: SIISLSLMSTGILIFFRVDFQQA*SCSNII
Trigger: GATGATGTTGGAACAGGAGCAGGCCTGTTGGAAATC...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS GCA 90 bp TGGCTGAGCACGAGCACTGGACGATGGCCCATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAGCTGGGGGAACCGGCAGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: WLSTSTGRWPIMATR*RAGYPELGEPAEPS
Trigger: AGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368259.6
ENST00000478640.6
ENST00000533194.5
CDS GCA 90 bp GTCTTGAGCACGAGCACTGGACGATGGCCCATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAGCTGGGGGAACCGGCAGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: VLSTSTGRWPIMATR*RAGYPELGEPAEPS
Trigger: AGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS GCA 90 bp CTAATGAGCACGAGCACTGGACGATGGCCCATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAGCTGGGGGAACCGGCAGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: LMSTSTGRWPIMATR*RAGYPELGEPAEPS
Trigger: AGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCATTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472765.6
CDS CCA 90 bp GATGGCCCATCATGGCGACGCGATGCAGAGCCGGGTACCCAGAGCTaGGGGAACCGGCAGAACCTTCTGGAGAGAGAGAACCAGACAGAA +
Preference number: 5 (lower is better)
Translates to: DGPSWRRDAEPGTQS*GNRQNLLERENQTE
Trigger: TTCTGTCTGGTTCTCTCTCTCCAGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368258.7
ENST00000478640.6
ENST00000533194.5
CDS CCA 90 bp ATGCAGAGCCGGGTACCCAGAGCTGGGGGAACCGGCAGAACCTTCTaGAGAGAGAGAACCAGACAGAAGCCCAGAAAACGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: MQSRVPRAGGTGRTF*RERTRQKPRKRCLL
Trigger: GAGGAGGCAGCGTTTTCTGGGCTTCTGTCTGGTTCTCTCTCTCCAGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000478640.6
ENST00000533194.5
CDS-3UTR CAA 90 bp TTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGAATGGCATCAGGAGCCCCGCCTaGCCGGCTCTGGTCATCGCC +
Preference number: 5 (lower is better)
Translates to: FDHGLGRWMLDLNLSKNGIRSPA*PALVIA
Trigger: GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGAT...GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp CTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCTGGTCATCGCCTTTCTTCTAGCAATGCGATTATaGTCTGTCTTCCGGACTCTG +
Preference number: 5 (lower is better)
Translates to: LLASIRSPALPALVIAFLLAMRL*SVFRTL
Trigger: CAGAGTCCGGAAGACAGACAATAATCGCATTGCTAG...AAGAAAGGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS CCA 90 bp GCCAAGAATATAAAGCTAGACCTAATGAGCACGAGCACTGGACGATaGCCCATCATGGCGACGCGATGCAGAGCCGGGTACCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AKNIKLDLMSTSTGR*PIMATRCRAGYPEL
Trigger: CAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCATTAGGTCTAGCTTTATATTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472765.6
CDS-3UTR CAA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATTTCGATCATGGACTaGGCCGCTGGATGCTGGACT +
Preference number: 5 (lower is better)
Translates to: QFLWSADYPGPTGSSNAIISIMD*AAGCWT
Trigger: AGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAAT...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp CAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTGCATCCAGGGCAATGTaGCAAGCCAAAGATGACCAC +
Preference number: 5 (lower is better)
Translates to: QFLWSADYPGPTGSSNAIASRAM*QAKDDH
Trigger: GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGC...AATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TCATCACAATGCCTCCCATTGGGTCCAAAAGCATCTTCATCATGGACTTGGGTCATCAGGAGCCCCGCCTaGCCGGCTCTGGTCATCGCC +
Preference number: 5 (lower is better)
Translates to: SSQCLPLGPKASSSWTWVIRSPA*PALVIA
Trigger: GGCGATGACCAGAGCCGGCAAGGCGGGGCTCCTGAT...GACCCAAGTCCATGATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR CAA 90 bp GCCTTGCCTAGCACTCACTCCTGGCCAGCATCAGGAGCCCCGCCTTGCCGGCTCGTAGTAATAGAGCTGTaGATGATGTTCAGCATCATA +
Preference number: 5 (lower is better)
Translates to: ALPSTHSWPASGAPPCRLVVIEL*MMFSII
Trigger: TATGATGCTGAACATCATCAACAGCTCTATTACTAC...GAGCCGGCAAGGCGGGGCTCCTGATGCTGGCCAGGAGTGAGTGCTAGGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp CTCTGGTCGGCTGACTATCCGGGCCCCACAGGCTCTAGCAATGCGATTATTGTCATGGCATCCTGGAGGTaGCGTTCTACTTCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: LWSADYPGPTGSSNAIIVMASWR*RSTSER
Trigger: TCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCAT...GACAATAATCGCATTGCTAGAGCCTGTGGGGCCCGGATAGTCAGCCGACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTGGGTCCAGGAGAACATaGCGACACACTTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSGSRRT*RHTCMA
Trigger: TGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GCCCCACAGGCTCTAGCAATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGGGGTCCAGGAGAACATaGCGACACACTTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: APQALAMRLLSVFRTLRMGSRRT*RHTCMA
Trigger: TGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC...CATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TCCAACATCATCTTCTCTCAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACACGCTGGATGCTGGACTaGAATCTCTCGAAGAATGGC +
Preference number: 5 (lower is better)
Translates to: SNIIFSQFLWSADYPGPTRWMLD*NLSKNG
Trigger: GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCG...TGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGCATCTGCTGCTCCAGGAAGCATCCAGGGCAATGTaGCAAGCCAAAGATGACCAC +
Preference number: 5 (lower is better)
Translates to: CLAVSTDHHCWVHLLLQEASRAM*QAKDDH
Trigger: GTGGTCATCTTTGGCTTGCAACATTGCCCTGGATGC...TTCCTGGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTTCTCCTGGGTGTGCTaGGCCCGAAGGGAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: SRRTLRHTCMASWRLRSTFSWVC*ARREVS
Trigger: ACTTACCTCCCTTCGGGCCAAGCACACCCAGGAGAA...AGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp AACCTCTTCATCCTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCGCTGGATGCTGGACTaGAATCTCTCGAAGAATGGC +
Preference number: 5 (lower is better)
Translates to: NLFILGPANFDHGLGRWMRWMLD*NLSKNG
Trigger: GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCG...CATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TCCAACATCATCTTCTCTCAGTTCCTCTGGTCGGCTGACTATCCGGGCCCCACACACATCGGGCTTCAGTaGGATAATGTCCTCACAGAG +
Preference number: 5 (lower is better)
Translates to: SNIIFSQFLWSADYPGPTHIGLQ*DNVLTE
Trigger: CTCTGTGAGGACATTATCCAACTGAAGCCCGATGTG...TGTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGACTAGCAATGCGATTATaGTCTGTCTTCCGGACTCTG +
Preference number: 5 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGLAMRL*SVFRTL
Trigger: CAGAGTCCGGAAGACAGACAATAATCGCATTGCTAG...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp AACCTCTTCATCCTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGTGCATTGAAGTAGCCTaGCCTAGCACTCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: NLFILGPANFDHGLGRWMCIEVA*PSTHSW
Trigger: CCAGGAGTGAGTGCTAGGCAAGGCTACTTCAATGCA...CATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GCCCCACAGGCTCTAGCAATGCGATTATTGTCTGTCTTCCGGACTCTGCGGATGTTCCGGATTCACGCTTaGTGTTCTGGCCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: APQALAMRLLSVFRTLRMFRIHA*CSGQRK
Trigger: CTTCCTTTGGCCAGAACACAAAGCGTGAATCCGGAA...CATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS-3UTR CAA 90 bp TGTCTTCCGGACTCTGCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGATCTTCATCATGGACTaGGGTCCCAAACATGTTCGG +
Preference number: 5 (lower is better)
Translates to: CLPDSADGCDIGPHKVVLIFIMD*GPKHVR
Trigger: CCGAACATGTTTGGGACCCAAGTCCATGATGAAGAT...CAGCACTACCTTATGCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GAGGTAAGTAGACGGATGGTGCTGGCCCCACAGTTCTGGATCAGGGTACGAGGATCTCGAAGAATGGCATaGCCATCATTGGTCATCACA +
Preference number: 5 (lower is better)
Translates to: EVSRRMVLAPQFWIRVRGSRRMA*PSLVIT
Trigger: TGTGATGACCAATGATGGCAATGCCATTCTTCGAGA...TCCTCGTACCCTGATCCAGAACTGTGGGGCCAGCACCATCCGTCTACTTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCATTTCGATCATGGACTaGGCCGCTGGATGCTGGACT +
Preference number: 5 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSISIMD*AAGCWT
Trigger: AGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAAT...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GGGTCCAGGAGAACATTGCGACACACTTGCATGGCATCCTGGAGGTTGCGTTCTTCAAACTGTACCATCTaGACAGCATCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: GSRRTLRHTCMASWRLRSSNCTI*TASRAM
Trigger: CATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGA...AGAACGCAACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTTCTCCTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCCAGGCCTTGGGGTCTTaGCAGTCAGTGATGAAAGTA +
Preference number: 5 (lower is better)
Translates to: GPANFDHGLGRWMLDLNLQALGS*QSVMKV
Trigger: TACTTTCATCACTGACTGCAAAGACCCCAAGGCCTG...GAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTTTCTCCTGGGTGTGCTaGGCCCGAAGGGAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: THLHGILEVAFYFRENLFFSWVC*ARREVS
Trigger: ACTTACCTCCCTTCGGGCCAAGCACACCCAGGAGAA...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS CCA 90 bp CCAAGAATAATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: PRIITDVVPSPTSSS*VRLISIMDLAAGCW
Trigger: CCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496684.6
CDS-3UTR CAA 90 bp TCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCGGATGGGTCACATCCTaGTTAATCATGACTCCACGC +
Preference number: 5 (lower is better)
Translates to: SQSCWMYSSSIWRIRVKSGWVTS*LIMTPR
Trigger: GCGTGGAGTCATGATTAACAAGGATGTGACCCATCC...GGACTTCACCCGAATTCTCCAGATGGAGGAAGAGTACATCCAGCAGCTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS CCA 90 bp TCAAGAATAATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: SRIITDVVPSPTSSS*VRLISIMDLAAGCW
Trigger: CCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368256.3
ENST00000415548.1
CDS CCA 90 bp GCAAGAATAATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCTGAGCACGAGCAC +
Preference number: 5 (lower is better)
Translates to: ARIITDVVPSPTSSS*VRLISIMDLAEHEH
Trigger: GTGCTCGTGCTCAGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533194.5
CDS-3UTR CAA 90 bp GCTGATCATATCATCCAATGCCTTGCGGTAAGCACTGATCACCACTGTTGGGTGATGGCATTGCCATCATaGGTCATCACAATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ADHIIQCLAVSTDHHCWVMALPS*VITMPP
Trigger: GGGAGGCATTGTGATGACCAATGATGGCAATGCCAT...CACCCAACAGTGGTGATCAGTGCTTACCGCAAGGCATTGGATGATATGATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGAATGGCTCAAACTGTACCATCTaGACAGCATCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: FDHGLGRWMLDLNLSKNGSNCTI*TASRAM
Trigger: CATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGA...GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGCACATCGGGCTTCAGTaGGATAATGTCCTCACAGAG +
Preference number: 5 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKHIGLQ*DNVLTE
Trigger: CTCTGTGAGGACATTATCCAACTGAAGCCCGATGTG...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGCAGGCCTTGGGGTCTTaGCAGTCAGTGATGAAAGTA +
Preference number: 5 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKQALGS*QSVMKV
Trigger: TACTTTCATCACTGACTGCAAAGACCCCAAGGCCTG...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCTGCATTGAAGTAGCCTaGCCTAGCACTCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSCIEVA*PSTHSW
Trigger: CCAGGAGTGAGTGCTAGGCAAGGCTACTTCAATGCA...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp ACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGGGCAATGTTGCAAGCATGGCATTGCCATCATaGGTCATCACAATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TILLKLYHLDSIQGNVASMALPS*VITMPP
Trigger: GGGAGGCATTGTGATGACCAATGATGGCAATGCCAT...GCTTGCAACATTGCCCTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GTCAATCTCTTTCCGACCATTCTCCTCAAACTGTACCATCTTGACAGCATCCAGATGGCATCCTGGAGGTaGCGTTCTACTTCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: VNLFPTILLKLYHLDSIQMASWR*RSTSER
Trigger: TCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCAT...CTGGATGCTGTCAAGATGGTACAGTTTGAGGAGAATGGTCGGAAAGAGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp GAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCAACATTGCGACACACTaGCATGGCATCCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: ENSGEVLLSCNLNVSLAFNIATH*HGILEV
Trigger: AACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTT...GAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCAACATTGCGACACACTaGCATGGCATCCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSNIATH*HGILEV
Trigger: AACCTCCAGGATGCCATGCAAGTGTGTCGCAATGTT...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp TTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGAATGGCTCATCGCCTTTCTTTTaGTGGCCTGAAACGATGTCA +
Preference number: 5 (lower is better)
Translates to: FDHGLGRWMLDLNLSKNGSSPFF*WPETMS
Trigger: TGACATCGTTTCAGGCCACAAAAAGAAAGGCGATGA...GCCATTCTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp ACACACTTGCATGGCATCCTGGAGGTTGCGTTCTACTTCCGAGAGAATCTCTTTATCTTCATCATGGACTaGGGTCCCAAACATGTTCGG +
Preference number: 5 (lower is better)
Translates to: THLHGILEVAFYFRENLFIFIMD*GPKHVR
Trigger: CCGAACATGTTTGGGACCCAAGTCCATGATGAAGAT...AAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS-3UTR CAA 90 bp AGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTGGATGGGTCACATCCTaGTTAATCATGACTCCACGC +
Preference number: 5 (lower is better)
Translates to: RIRVKSSSRVISMSVWLSGWVTS*LIMTPR
Trigger: GCGTGGAGTCATGATTAACAAGGATGTGACCCATCC...AGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS GCA 90 bp CATCTTCATCATGGACTTGGGTCCCAAACATGTTCGGATGATATCTaGAATAGTACTGCCAGGCTCGGTCTATGTTGGTCCCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: HLHHGLGSQTCSDDI*NSTARLGLCWSHFL
Trigger: TAAGAAGTGGGACCAACATAGACCGAGCCTGGCAGTACTATTGCAGATATCATCCGAACATGTTTGGGACCCAAGTCCATGATGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463132.5
CDS-3UTR CAA 90 bp AATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCTCATCGCCTTTCTTTTaGTGGCCTGAAACGATGTCA +
Preference number: 5 (lower is better)
Translates to: NSGEVLLSCNLNVSLAFSSSPFF*WPETMS
Trigger: TGACATCGTTTCAGGCCACAAAAAGAAAGGCGATGA...GGAGAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS TCA 90 bp CGGATGATATCTGCAATAGTCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCTGAGCACG +
Preference number: 5 (lower is better)
Translates to: RMISAIVLAALMFPD*TFLPDSRFVFWLST
Trigger: CGTGCTCAGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATATCATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000415548.1
ENST00000478640.6
ENST00000496684.6
CDS TCA 90 bp CGGATGATATCTGCAATAGTCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCACTGCCAG +
Preference number: 5 (lower is better)
Translates to: RMISAIVLAALMFPD*TFLPDSRFVFWHCQ
Trigger: CTGGCAGTGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATATCATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413555.5
CDS-3UTR CAA 90 bp GCTAATTTCGATCATGGACTTGGCCGCTGGATGCTGGACTTGAATCTCTCGAAGGTAGTAATAGAGCTGTaGATGATGTTCAGCATCATA +
Preference number: 5 (lower is better)
Translates to: ANFDHGLGRWMLDLNLSKVVIEL*MMFSII
Trigger: TATGATGCTGAACATCATCAACAGCTCTATTACTAC...CTTCGAGAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS TCA 90 bp ACACTTAAAAGATTTGTGACCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCTGAGCACG +
Preference number: 5 (lower is better)
Translates to: TLKRFVTLAALMFPD*TFLPDSRFVFWLST
Trigger: CGTGCTCAGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGGTCACAAATCTTTTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489870.1
CDS-3UTR CAA 90 bp GAGAATTCGGGTGAAGTCCTCCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCATTGATGTTTCCAGATaGAACTTTTCTTCCGGATTC +
Preference number: 5 (lower is better)
Translates to: ENSGEVLLSCNLNVSLAFIDVSR*NFSSGF
Trigger: GAATCCGGAAGAAAAGTTCAATCTGGAAACATCAAT...GAAAGCCAGACTGACATTGAGATTACACGAGAGGAGGACTTCACCCGAATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS TCA 90 bp CGGATGATATCTGCAATAGTCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCTCATTTA +
Preference number: 5 (lower is better)
Translates to: RMISAIVLAALMFPD*TFLPDSRFVFWPHL
Trigger: TAAATGAGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATATCATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472765.6
CDS-3UTR CAA 90 bp AGCATCATATCACTGTCACTGATGTCGACTGGGATACTTATTTTCTTTAGGGTGTCTCGAAGAATGGCATaGCCATCATTGGTCATCACA +
Preference number: 5 (lower is better)
Translates to: SIISLSLMSTGILIFFRVSRRMA*PSLVIT
Trigger: TGTGATGACCAATGATGGCAATGCCATTCTTCGAGA...CACCCTAAAGAAAATAAGTATCCCAGTCGACATCAGTGACAGTGATATGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368258.7
ENST00000368262.7
CDS TCA 90 bp CGGATGATATCTGCAATAGTCTTGGCAGCATTGATGTTTCCAGATTaGACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCCTAAAATA +
Preference number: 5 (lower is better)
Translates to: RMISAIVLAALMFPD*TFLPDSRFVFWPKI
Trigger: TATTTTAGGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATATCATCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490221.5
CDS-3UTR CAA 90 bp CTTCATCATGGACTTGGGTCCCAAACATGTTCGGATGATATCTGCAATAGTCTTATATCTGCAATAGTCTaGGCAGCATTGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LHHGLGSQTCSDDICNSLISAIV*AALMFP
Trigger: TGGAAACATCAATGCTGCCAAGACTATTGCAGATAT...AAGACTATTGCAGATATCATCCGAACATGTTTGGGACCCAAGTCCATGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS GCA 90 bp CTAACATCATCAGGAAAATGTTCTGAAAGAGGTCAACTTTTCCTCTaGCTATTTGCCTACTCTATAAAGTCTAGATGCACAGGACACATG +
Preference number: 5 (lower is better)
Translates to: LTSSGKCSERGQLFL*LFAYSIKSRCTGHM
Trigger: CATGTGTCCTGTGCATCTAGACTTTATAGAGTAGGCAAATAGGCAGAGGAAAAGTTGACCTCTTTCAGAACATTTTCCTGATGATGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489870.1
CDS GCA 72 bp ACGAGCACTGGACGATGGCCCATCATGGCGACGCGATaGAGAGCCGGGTACCCAGAGCTGGGGGAACCGGCA +
Preference number: 6 (lower is better)
Translates to: TSTGRWPIMATR*RAGYPELGEPA
Trigger: TGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368258.7
ENST00000368259.6
ENST00000368262.7
ENST00000472765.6
ENST00000478640.6
ENST00000533194.5
CDS CCA 72 bp TCATGGCGACGCGATGCAGAGCCGGGTACCCAGAGCTaGGGGAACCGGCAGAACCTTCTGGAGAGAGAGAAC +
Preference number: 6 (lower is better)
Translates to: SWRRDAEPGTQS*GNRQNLLEREN
Trigger: GTTCTCTCTCTCCAGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCGGCTCTGCATCGCGTCGCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368258.7
ENST00000472765.6
ENST00000478640.6
ENST00000533194.5
CDS CCA 72 bp CGCTTTGTGTTCTGGCTGAGCACGAGCACTGGACGATaGCCCATCATGGCGACGCGATGCAGAGCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: RFVFWLSTSTGR*PIMATRCRAGY
Trigger: GTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAGCCAGAACACAAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368259.6
ENST00000415548.1
ENST00000478640.6
ENST00000496684.6
CDS CCA 72 bp CGATCATGGACTTGGCTGAGCACGAGCACTGGACGATaGCCCATCATGGCGACGCGATGCAGAGCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: RSWTWLSTSTGR*PIMATRCRAGY
Trigger: GTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAGCCAAGTCCATGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533194.5
CDS CCA 72 bp CGGGTACCCAGAGCTGGGGGAACCGGCAGAACCTTCTaGAGAGAGAGAACCAGACAGAAGCCCAGAAAACGC +
Preference number: 6 (lower is better)
Translates to: RVPRAGGTGRTF*RERTRQKPRKR
Trigger: GCGTTTTCTGGGCTTCTGTCTGGTTCTCTCTCTCCAGAAGGTTCTGCCGGTTCCCCCAGCTCTGGGTACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000478640.6
ENST00000533194.5
CDS CCA 72 bp GGATTCACGCTTTGTGTTCTGGCTGAGCACGAGCACTaGACGATGGCCCATCATGGCGACGCGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: GFTLCVLAEHEH*TMAHHGDAMQS
Trigger: GCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAGCCAGAACACAAAGCGTGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295688.8
ENST00000368256.3
ENST00000368259.6
ENST00000415548.1
ENST00000478640.6
ENST00000489870.1
ENST00000496684.6
CDS CCA 72 bp GTCAACATGGTGAAACTCCGTCTTGAGCACGAGCACTaGACGATGGCCCATCATGGCGACGCGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: VNMVKLRLEHEH*TMAHHGDAMQS
Trigger: GCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAAGACGGAGTTTCACCATGTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368262.7
CDS CCA 72 bp ATAAAGCTAGACCTAATGAGCACGAGCACTGGACGATaGCCCATCATGGCGACGCGATGCAGAGCCGGGTAC +
Preference number: 6 (lower is better)
Translates to: IKLDLMSTSTGR*PIMATRCRAGY
Trigger: GTACCCGGCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCATTAGGTCTAGCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472765.6
CDS CCA 72 bp CTAATTTCGATCATGGACTTGGCTGAGCACGAGCACTaGACGATGGCCCATCATGGCGACGCGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LISIMDLAEHEH*TMAHHGDAMQS
Trigger: GCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAGCCAAGTCCATGATCGAAATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533194.5
CDS CCA 72 bp GTTCGGATGATATCTGCAATAGTTGAGCACGAGCACTaGACGATGGCCCATCATGGCGACGCGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: VRMISAIVEHEH*TMAHHGDAMQS
Trigger: GCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCAACTATTGCAGATATCATCCGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368258.7
CDS CCA 72 bp CTGGGTCCGGCTAATTTCGATCATGGACTTGGCCGCTaGATGCTGGACTTGAATCTTCATCATGGACTTGGG +
Preference number: 6 (lower is better)
Translates to: LGPANFDHGLGR*MLDLNLHHGLG
Trigger: CCCAAGTCCATGATGAAGATTCAAGTCCAGCATCCAGCGGCCAAGTCCATGATCGAAATTAGCCGGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478640.6
CDS CCA 72 bp CAAGAATATAAAGCTAGACCTAATGAGCACGAGCACTaGACGATGGCCCATCATGGCGACGCGATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QEYKARPNEHEH*TMAHHGDAMQS
Trigger: GCTCTGCATCGCGTCGCCATGATGGGCCATCGTCCAGTGCTCGTGCTCATTAGGTCTAGCTTTATATTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472765.6
CDS GCA 72 bp CATGGACTTGGGTCCCAAACATGTTCGGATGATATCTaGAATAGTACTGCCAGGCTCGGTCTATGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: HGLGSQTCSDDI*NSTARLGLCWS
Trigger: GGACCAACATAGACCGAGCCTGGCAGTACTATTGCAGATATCATCCGAACATGTTTGGGACCCAAGTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463132.5
CDS CCA 72 bp ATTACTGATGTGGTCCCATCTCCAACCTCTTCATCCTaGGTCCGGCTAATTTCGATCATGGACTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: ITDVVPSPTSSS*VRLISIMDLAE
Trigger: CTCAGCCAAGTCCATGATCGAAATTAGCCGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533194.5
CDS CAA 72 bp CGCTTTGTGTTCTGGCACTGCCAGGCTCGGTCTATGTaGGTCCCACTTCTTATAATGTCTCCTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: RFVFWHCQARSM*VPLLIMSPLPS
Trigger: AGAAGGAAGAGGAGACATTATAAGAAGTGGGACCAACATAGACCGAGCCTGGCAGTGCCAGAACACAAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413555.5
ENST00000446905.5
CDS GCA 72 bp ACTTTTCTTCCGGATTCACGCTTTGTGTTCTGGCACTaGCAGGCTCGGTCTATGTTGGTCCCACTTCTTATA +
Preference number: 6 (lower is better)
Translates to: TFLPDSRFVFWH*QARSMLVPLLI
Trigger: TATAAGAAGTGGGACCAACATAGACCGAGCCTGGCAGTGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413555.5
ENST00000446905.5
CDS CAA 72 bp TGTTTCCAGATTGAACTTTTCTTCCGGATTCACGCTTaGTGTTCTGGCACTGCCAGGCTCGGTCTATGTTGG +
Preference number: 6 (lower is better)
Translates to: CFQIELFFRIHA*CSGTARLGLCW
Trigger: CCAACATAGACCGAGCCTGGCAGTGCCAGAACACAAAGCGTGAATCCGGAAGAAAAGTTCAATCTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413555.5
ENST00000446905.5
CDS CAA 90 bp TCCACCAAAGTACCCGTCTCAATGTCAGTCTGGCTTTCTCCTTTCTaGTATTCCAGAGAAGAATCCAGCAGCACAATGCGAGGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: STKVPVSMSVWLSPF*YSREESSSTMRGFL
Trigger: CAAGAACCCTCGCATTGTGCTGCTGGATTCTTCTCTGGAATACAAGAAAGGAGAAAGCCAGACTGACATTGAGACGGGTACTTTGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368261.7
CDS TCA 72 bp CAGCATGGTGACAGAGTGAGACTCAAGAATAATTACTaGTGTGGTCCCATCTCCAACCTCTTCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: QHGDRVRLKNNY*CGPISNLFILG
Trigger: ACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGAGTCTCACTCTGTCACCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368256.3
ENST00000415548.1
CDS TCA 72 bp CTCAGCTACAGACAGCATTTCCCCAAGAATAATTACTaGTGTGGTCCCATCTCCAACCTCTTCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LSYRQHFPKNNY*CGPISNLFILG
Trigger: ACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGGGGAAATGCTGTCTGTAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496684.6
CDS CAA 72 bp GCATGCCACTTTAGATATAGGATGTGGCTAGCTCTGTaGTTTTTCTCCCCTTGGGAATGCTTTCAGAATGGA +
Preference number: 6 (lower is better)
Translates to: ACHFRYRMWLAL*FFSPWECFQNG
Trigger: TCCATTCTGAAAGCATTCCCAAGGGGAGAAAAACAACAGAGCTAGCCACATCCTATATCTAAAGTGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489870.1
CDS CAA 72 bp GTCTCCTCTTCCTTCTTCACTTGTCCAATTCATAGATaGTCCTTCCAGATCACCTTCATACATTCATTACCT +
Preference number: 6 (lower is better)
Translates to: VSSSFFTCPIHR*SFQITFIHSLP
Trigger: AGGTAATGAATGTATGAAGGTGATCTGGAAGGACAATCTATGAATTGGACAAGTGAAGAAGGAAGAGGAGAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413555.5
ENST00000446905.5
CDS CCA 72 bp AAAGACATTTACCGAATATCTATCCAAGATCTACGGTaGGCACTAGGAATACAAAAGGGAATAAAGTACTTA +
Preference number: 6 (lower is better)
Translates to: KDIYRISIQDLR*ALGIQKGIKYL
Trigger: TAAGTACTTTATTCCCTTTTGTATTCCTAGTGCCCACCGTAGATCTTGGATAGATATTCGGTAAATGTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489870.1