RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCSER2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107771

Ensembl transcript IDs: ENST00000224756.12, ENST00000359979.8, ENST00000372088.8, ENST00000466105.5, ENST00000480006.1, ENST00000493409.5, ENST00000494144.5, ENST00000494586.5, ENST00000498300.5, ENST00000543283.2

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCTTAATTGCAAGCCTGTTCGGTGATTTCAAAGTACATCCCCAGTaGCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: ILIASLFGDFKVHPQ*PRDQETSMTTLLRN
Trigger: GTTTCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTACTTTGAAATCACCGAACAGGCTTGCAATTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR GCA 90 bp AGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAACCAAGAGTaGACCTCAGTGTCTGTAACACCATTTATGCTACAGGAACATTTG +
Preference number: 1 (lower is better)
Translates to: RDQETSMTTLLRNQE*TSVSVTPFMLQEHL
Trigger: CAAATGTTCCTGTAGCATAAATGGTGTTACAGACACTGAGGTGCACTCTTGGTTTCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR GCA 90 bp CCATCAGAAGTGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTaGTCACCTCTTACCAAATCCAAGAATGGTTTCTATCCAGTGAAT +
Preference number: 1 (lower is better)
Translates to: PSEVLVHKSMVQDLS*SPLTKSKNGFYPVN
Trigger: ATTCACTGGATAGAAACCATTCTTGGATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCACTTCTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR CCA 90 bp TTGCTCACCTCTTACCAAATCCAAGAATGGTTTCTATCCAGTGAATaGCAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGT +
Preference number: 1 (lower is better)
Translates to: LLTSYQIQEWFLSSE*QIHLIGKGIMGQNG
Trigger: ACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTGCCATTCACTGGATAGAAACCATTCTTGGATTTGGTAAGAGGTGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp GATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGAGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 2 (lower is better)
Translates to: DVHRPDACLGLSIHCGPRGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...TCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATTGGCCTGGAAGCTTTaGGGCTCTAGTTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRLAWKL*GSSWGL
Trigger: CAGCCCCCAACTAGAGCCTCAAAGCTTCCAGGCCAA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp CACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGAAGGCTGTAGTACTTaGGGAGGAATTCGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: HRPDACLGLSIHCGPRYVEGCST*GGIRLQ
Trigger: CTGGAGACGAATTCCTCCTCAAGTACTACAGCCTTC...AACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGTGCACATGGTAGCATaGAGGTTCCACACCTACCTT +
Preference number: 2 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRVHMVA*RFHTYL
Trigger: AAGGTAGGTGTGGAACCTCCATGCTACCATGTGCAC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR GCA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 2 (lower is better)
Translates to: MSWIEHSLRASIRCGFISAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGGCAGGAGAATCGCTTaGACCCGGGAGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: ALLICLTLTVSGLCEERSGRRIA*TREAEV
Trigger: AACTTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGACAACTGCAGCCATCATaGGTCATCTCCATAACAAAG +
Preference number: 2 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRQLQPS*VISITK
Trigger: CTTTGTTATGGAGATGACCCATGATGGCTGCAGTTG...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTTGGCCTGGAAGCTTTaGGGCTCTAGTTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNLAWKL*GSSWGL
Trigger: CAGCCCCCAACTAGAGCCTCAAAGCTTCCAGGCCAA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGAGGGATGGATAACATaGTTTGGGCCTTTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIEGWIT*FGPLAG
Trigger: GCCTGCCAAAGGCCCAAATCATGTTATCCATCCCTC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTCCCACTGGCGGAGACTaGTTTCTTCCAACTCTCTTA +
Preference number: 2 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIPTGGD*FLPTLL
Trigger: TAAGAGAGTTGGAAGAAATCAGTCTCCGCCAGTGGG...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTCATGATTTGGGCCTTTaGCAGGCCTCTGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: ALLICLTLTVSGLCEERSHDLGL*QASEMG
Trigger: ACCCATTTCAGAGGCCTGCCAAAGGCCCAAATCATG...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGAGGGATGGATAACATaGTTTGGGCCTTTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNEGWIT*FGPLAG
Trigger: GCCTGCCAAAGGCCCAAATCATGTTATCCATCCCTC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTTAGTGGCCTTGGGATaGTTGTCTTGGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNLVALG*LSWPGS
Trigger: GCTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR GCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTAGTGGCCTTGGGATaGTTGTCTTGGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLVALG*LSWPGS
Trigger: GCTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 2 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGACTCGGGAGGTGTCTaGAGAGAAGTGGGTATAAAC +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNDSGGV*REVGIN
Trigger: GTTTATACCCACTTCTCTTCAGACACCTCCCGAGTC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTACCACAGTAGCAAGCTaGAAGCTGCACATAAAGCTA +
Preference number: 2 (lower is better)
Translates to: DGGGGEYYELQLSQDSLITTVAS*KLHIKL
Trigger: TAGCTTTATGTGCAGCTTGCAGCTTGCTACTGTGGT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAACATGATTTGGGCCTTTaGCAGGCCTCTGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKHDLGL*QASEMG
Trigger: ACCCATTTCAGAGGCCTGCCAAAGGCCCAAATCATG...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTCAACTGCAGCCATCATaGGTCATCTCCATAACAAAG +
Preference number: 2 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFQLQPS*VISITK
Trigger: CTTTGTTATGGAGATGACCCATGATGGCTGCAGTTG...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAGTCCTACTTGGAGATaGTTCAGAAACTGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFSPTWR*FRNWRR
Trigger: CCGCCTCCAGTTTCTGAATCATCTCCAAGTAGGACT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGTGACTTTTTACAAGTaGGAGTCCTACTTGGAGATG +
Preference number: 2 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFVTFYK*ESYLEM
Trigger: CATCTCCAAGTAGGACTCCCACTTGTAAAAAGTCAC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTTTGCAGGCTTTCAATaGAACCTCCACCACAGTAGC +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNFAGFQ*NLHHSS
Trigger: GCTACTGTGGTGGAGGTTCCATTGAAAGCCTGCAAA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR CAA 90 bp GCTTCTCCATCAGAAGTGCTGGTACATAAGAGTATGGTACAAGATTaGTCTTGCTCACCTCTTACCAAATCCAAGAATGGTTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: ASPSEVLVHKSMVQD*SCSPLTKSKNGFYP
Trigger: TGGATAGAAACCATTCTTGGATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCACTTCTGATGGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGAGTCCTACTTGGAGATaGTTCAGAAACTGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKSPTWR*FRNWRR
Trigger: CCGCCTCCAGTTTCTGAATCATCTCCAAGTAGGACT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAGACATATAACCCACTaGCGGAGACTGATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKRHITH*RRLISS
Trigger: GGAAGAAATCAGTCTCCGCCAGTGGGTTATATGTCT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTTGCAGGCTTTCAATaGAACCTCCACCACAGTAGC +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFFAGFQ*NLHHSS
Trigger: GCTACTGTGGTGGAGGTTCCATTGAAAGCCTGCAAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTTAAAATGGCTATCATaGATCCACAAGCCTAAGGGT +
Preference number: 2 (lower is better)
Translates to: DGGGGEYYELQLSQDSLILKWLS*IHKPKG
Trigger: ACCCTTAGGCTTGTGGATCCATGATAGCCATTTTAA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTGTTGTGATTATTGGTaGCTTTTTACAAGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFCCDYW*LFTSGS
Trigger: ACTCCCACTTGTAAAAAGTCACCAATAATCACAACA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTAACCAGGATATAAAATaGAGGAGCCAAACTAGTAGA +
Preference number: 2 (lower is better)
Translates to: DGGGGEYYELQLSQDSLINQDIK*RSQTSR
Trigger: TCTACTAGTTTGGCTCCTTCATTTTATATCCTGGTT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTAACCAGGATATAAAATaGAGGAGCCAAACTAGTAGA +
Preference number: 2 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFNQDIK*RSQTSR
Trigger: TCTACTAGTTTGGCTCCTTCATTTTATATCCTGGTT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCACCACAGTAGCAAGCTaGAAGCTGCACATAAAGCTA +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFTTVAS*KLHIKL
Trigger: TAGCTTTATGTGCAGCTTGCAGCTTGCTACTGTGGT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAGACATATAACCCACTaGCGGAGACTGATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFRHITH*RRLISS
Trigger: GGAAGAAATCAGTCTCCGCCAGTGGGTTATATGTCT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGGGGCGGAGCTTAGATaGTTTCAGATTCTGATTATT +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFGAELR*FQILII
Trigger: AATAATCAGAATCTGAAAGCATCTAAGCTCCGCCCC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGCGTTCTGAACTTCACTaGTTCTCCATCAGAAGTGCT +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKRSELH*FSIRSA
Trigger: AGCACTTCTGATGGAGAAGCAGTGAAGTTCAGAACG...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGAAAGCTGCAAGGACTTaGGCTGAGACATATAACCCA +
Preference number: 2 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMKAART*AETYNP
Trigger: TGGGTTATATGTCTCAGCCCAAGTCCTTGCAGCTTT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGTGACTTTTTACAAGTaGGAGTCCTACTTGGAGATG +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFVTFYK*ESYLEM
Trigger: CATCTCCAAGTAGGACTCCCACTTGTAAAAAGTCAC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAATGAATTTTCTGACGTaGAGAGGGATGGATAACATG +
Preference number: 2 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKMNFLT*RGMDNM
Trigger: CATGTTATCCATCCCTCTCCACGTCAGAAAATTCAT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAATGAATTTTCTGACGTaGAGAGGGATGGATAACATG +
Preference number: 2 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKMNFLT*RGMDNM
Trigger: CATGTTATCCATCCCTCTCCACGTCAGAAAATTCAT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTTAAAATGGCTATCATaGATCCACAAGCCTAAGGGT +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNLKWLS*IHKPKG
Trigger: ACCCTTAGGCTTGTGGATCCATGATAGCCATTTTAA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTTTCTATCCAGTGAATaGCAAATTCATCTGATAGGT +
Preference number: 2 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFFLSSE*QIHLIG
Trigger: ACCTATCAGATGAATTTGCCATTCACTGGATAGAAA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGCAGATTTACTGAACTaGCAAGTGACCCAAAGCATA +
Preference number: 2 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMADLLN*QVTQSI
Trigger: TATGCTTTGGGTCACTTGTCAGTTCAGTAAATCTGC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAAACAATCCCCAGAATaGAAATTGCCATTTGGATTC +
Preference number: 2 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKKQSPE*KLPFGF
Trigger: GAATCCAAATGGCAATTTGCATTCTGGGGATTGTTT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGAAACACTTTCAGTCTaGGGAATTTGGGAAATGAAT +
Preference number: 2 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNETLSV*GIWEMN
Trigger: ATTCATTTCCCAAATTCCCCAGACTGAAAGTGTTTC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAACCAGGATATAAAATaGAGGAGCCAAACTAGTAGA +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFNQDIK*RSQTSR
Trigger: TCTACTAGTTTGGCTCCTTCATTTTATATCCTGGTT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGCCTCTTTCACGAATGTaGAACTTAACAAACCCCATA +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKPLSRM*NLTNPI
Trigger: TATGGGGTTTGTTAAGTTTCACATTCGTGAAAGAGG...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATGAATTTTCTGACGTaGAGAGGGATGGATAACATG +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKMNFLT*RGMDNM
Trigger: CATGTTATCCATCCCTCTCCACGTCAGAAAATTCAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGAAACACTTTCAGTCTaGGGAATTTGGGAAATGAAT +
Preference number: 2 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFETLSV*GIWEMN
Trigger: ATTCATTTCCCAAATTCCCCAGACTGAAAGTGTTTC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGACAATAAATGGTTTGTaGAGGAGGATTTGGCACAGA +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKTINGL*RRIWHR
Trigger: TCTGTGCCAAATCCTCCTCCACAAACCATTTATTGT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTGTTGTGATTATTGGTaGCTTTTTACAAGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKCCDYW*LFTSGS
Trigger: ACTCCCACTTGTAAAAAGTCACCAATAATCACAACA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATGGTTTCTATCCAGTaGATGGCAAATTCATCTGAT +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKMVSIQ*MANSSD
Trigger: ATCAGATGAATTTGCCATTCACTGGATAGAAACCAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGAAACAATCCCCAGAATaGAAATTGCCATTTGGATTC +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKKQSPE*KLPFGF
Trigger: GAATCCAAATGGCAATTTGCATTCTGGGGATTGTTT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTGGTACATAAGAGTATaGTACAAGATTTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKWYIRV*YKICLA
Trigger: AGCAAGACAAATCTTGTACCATACTCTTATGTACCA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAATGCTACAGGAACATTaGGAAGTGACAGCTGTAGGG +
Preference number: 3 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRMLQEH*EVTAVG
Trigger: CCCTACAGCTGTCACTTCCAAATGTTCCTGTAGCAT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp CTTCCGGATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGGGCAGATATGCTGAGTaGCTGATAAAGATTAATGCT +
Preference number: 3 (lower is better)
Translates to: LPDVHRPDACLGLSIHCGGRYAE*LIKINA
Trigger: AGCATTAATCTTTATCAGCAACTCAGCATATCTGCC...CCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATCCGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR-3UTR CAA 90 bp CTTCCGGATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGTTCCTCTTTACATTTTaGGTGGCAGATATGCTGAGT +
Preference number: 3 (lower is better)
Translates to: LPDVHRPDACLGLSIHCGFLFTF*VADMLS
Trigger: ACTCAGCATATCTGCCACCAAAAATGTAAAGAGGAA...CCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATCCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR GCA 72 bp GCAAGCCTGTTCGGTGATTTCAAAGTACATCCCCAGTaGCCTAGAGACCAGGAAACCAGTATGACAACTCTG +
Preference number: 3 (lower is better)
Translates to: ASLFGDFKVHPQ*PRDQETSMTTL
Trigger: CAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTACTTTGAAATCACCGAACAGGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR CCA 72 bp AAGCTGCAAGGACTTGGGCTGAGACATATAACCCACTaGCGGAGACTGATTTCTTCCAACTCTCTTAGCCTG +
Preference number: 3 (lower is better)
Translates to: KLQGLGLRHITH*RRLISSNSLSL
Trigger: CAGGCTAAGAGAGTTGGAAGAAATCAGTCTCCGCCAGTGGGTTATATGTCTCAGCCCAAGTCCTTGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGTGGCCTTGGGATGCTaGTCTTGGCCTGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: ALLICLTLTVSGLCEERSVALGC*SWPGSF
Trigger: AAAGCTTCCAGGCCAAGACAAGCATCCCAAGGCCAC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGTGGCCTTGGGATGCTaGTCTTGGCCTGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFVALGC*SWPGSF
Trigger: AAAGCTTCCAGGCCAAGACAAGCATCCCAAGGCCAC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGGTACAAGATTTGTCTaGCTCACCTCTTACCAAATC +
Preference number: 3 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRGTRFV*LTSYQI
Trigger: GATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAGTATGGTACAAGATTaGTCTTGCTCACCTCTTACC +
Preference number: 3 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRSMVQD*SCSPLT
Trigger: GGTAAGAGGTGAGCAAGACAAATCTTGTACCATACT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAAGACAATAAATGGTTaGTGGAGGAGGATTTGGCAC +
Preference number: 3 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRKTING*WRRIWH
Trigger: GTGCCAAATCCTCCTCCACAAACCATTTATTGTCTT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGGAATCTCTAGAAATTaGAGTGACTTTTTGGCCATA +
Preference number: 3 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRGISRN*SDFLAI
Trigger: TATGGCCAAAAAGTCACTCAAATTTCTAGAGATTCC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: MSWIEHSLRASIRCGFISTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
3UTR-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGTTGTGTTAGTGGCCTaGGGATGCTTGTCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKVVLVA*GCLSWP
Trigger: AGGCCAAGACAAGCATCCCAAGGCCACTAACACAAC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTGCAGTGAGCCGAGATaGCGCCACTGTAATCCAGCC +
Preference number: 3 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKCSEPR*RHCNPA
Trigger: GGCTGGATTACAGTGGCGCAATCTCGGCTCACTGCA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR TCA 72 bp GGCTATCATGGATCCACAAGCCTAAGGGTTCAAGCCTaGATTACCAGCAAAACTCTAGCACCAACATATGTT +
Preference number: 3 (lower is better)
Translates to: GYHGSTSLRVQA*ITSKTLAPTYV
Trigger: AACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTTAGGCTTGTGGATCCATGATAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR GCA 72 bp GAAACCAGTATGACAACTCTGCTCAGAAACCAAGAGTaGACCTCAGTGTCTGTAACACCATTTATGCTACAG +
Preference number: 3 (lower is better)
Translates to: ETSMTTLLRNQE*TSVSVTPFMLQ
Trigger: CTGTAGCATAAATGGTGTTACAGACACTGAGGTGCACTCTTGGTTTCTGAGCAGAGTTGTCATACTGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGTTGTGTTAGTGGCCTaGGGATGCTTGTCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFVVLVA*GCLSWP
Trigger: AGGCCAAGACAAGCATCCCAAGGCCACTAACACAAC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR CCA 72 bp ACCCAAAGCATAATTAGGTTTGTGCACATGGTAGCATaGAGGTTCCACACCTACCTTCTACAGCGTATTAAA +
Preference number: 3 (lower is better)
Translates to: TQSIIRFVHMVA*RFHTYLLQRIK
Trigger: TTTAATACGCTGTAGAAGGTAGGTGTGGAACCTCCATGCTACCATGTGCACAAACCTAATTATGCTTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: ALLICLTLTVSGLCEERSTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR GCA 72 bp CTACTGGGTAAGATGGAAAGTAAATTGAAATGGTGCTaGAGCCTTATTGATCTTAATTGCAAGCCTGTTCGG +
Preference number: 3 (lower is better)
Translates to: LLGKMESKLKWC*SLIDLNCKPVR
Trigger: CCGAACAGGCTTGCAATTAAGATCAATAAGGCTGCAGCACCATTTCAATTTACTTTCCATCTTACCCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR CCA 72 bp CTGCTTCTCCATCAGAAGTGCTGGTACATAAGAGTATaGTACAAGATTTGTCTTGCTCACCTCTTACCAAAT +
Preference number: 3 (lower is better)
Translates to: LLLHQKCWYIRV*YKICLAHLLPN
Trigger: ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCACTTCTGATGGAGAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTACCCCATCAAAGTTTaGTGCAAATGTTTCAAGTTC +
Preference number: 3 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFYPIKV*CKCFKF
Trigger: GAACTTGAAACATTTGCACAAAACTTTGATGGGGTA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGGAATCTCTAGAAATTaGAGTGACTTTTTGGCCATA +
Preference number: 3 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFGISRN*SDFLAI
Trigger: TATGGCCAAAAAGTCACTCAAATTTCTAGAGATTCC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTCAGTCTGGGGAATTaGGGAAATGAATCAACAGTA +
Preference number: 3 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFFSLGN*GNESTV
Trigger: TACTGTTGATTCATTTCCCAAATTCCCCAGACTGAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR CCA 72 bp TCTTACCAAATCCAAGAATGGTTTCTATCCAGTGAATaGCAAATTCATCTGATAGGTAAGGGAATAATGGGT +
Preference number: 3 (lower is better)
Translates to: SYQIQEWFLSSE*QIHLIGKGIMG
Trigger: ACCCATTATTCCCTTACCTATCAGATGAATTTGCCATTCACTGGATAGAAACCATTCTTGGATTTGGTAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCATTTGCAAGATTTGTTaGACTAGATGTTGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFICKIC*TRCWLK
Trigger: CTTCAGCCAACATCTAGTCAAACAAATCTTGCAAAT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTTCAGTCTGGGGAATTaGGGAAATGAATCAACAGTA +
Preference number: 3 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKFSLGN*GNESTV
Trigger: TACTGTTGATTCATTTCCCAAATTCCCCAGACTGAA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTACCCCATCAAAGTTTaGTGCAAATGTTTCAAGTTC +
Preference number: 3 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFYPIKV*CKCFKF
Trigger: GAACTTGAAACATTTGCACAAAACTTTGATGGGGTA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
3UTR-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGATTTGCAAGATTTGTTaGACTAGATGTTGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMICKIC*TRCWLK
Trigger: CTTCAGCCAACATCTAGTCAAACAAATCTTGCAAAT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR GCA 72 bp CATGTATCTTCAGTTAATGACATAGTTGTAGATTGGTaGCCACCATCAGAATCATTTAATCAAAAGTACTCT +
Preference number: 3 (lower is better)
Translates to: HVSSVNDIVVDW*PPSESFNQKYS
Trigger: AGAGTACTTTTGATTAAATGATTCTGATGGTGGGCACCAATCTACAACTATGTCATTAACTGAAGATACATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTCCGGATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LPDVHRPDACLGLSIHCGGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...CCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATCCGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR TCA 90 bp CTTCCGGATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGATGCATGTCTTGGATTaGGCATTCACTGCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPDVHRPDACLGLSIHCGMHVLD*AFTAGL
Trigger: GAGGCCCGCAGTGAATGCTCAATCCAAGACATGCAT...CCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATCCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGAAGGCTGTAGTACTTaGGGTCTGTCTGCGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLREGCST*GLSAVR
Trigger: CCGCACCGCAGACAGACCTCAAGTACTACAGCCTTC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGAGAAGGCTGTAGTACTTaGGGAGGAATTCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DVHRPDACLGLSIHCGPREGCST*GGIRLQ
Trigger: CTGGAGACGAATTCCTCCTCAAGTACTACAGCCTTC...TCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR GCA 90 bp CACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGGATTGAGCATTCACTaGGGGCCTCGATACGTTGTG +
Preference number: 4 (lower is better)
Translates to: HRPDACLGLSIHCGPRYVGLSIH*GPRYVV
Trigger: CACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC...AACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAGCTGCAGGCCGCCCTaGGACCTGCGGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKSCRPP*DLRARG
Trigger: TCCTCGGGCCCGCAGGTCGCAGGGCGGCCTGCAGCT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATAGCTGCAGGCCGCCCTaGGACCTGCGGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNSCRPP*DLRARG
Trigger: TCCTCGGGCCCGCAGGTCGCAGGGCGGCCTGCAGCT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAATGCATGTCTTGGATTaGGCATTCACTGCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRMHVLD*AFTAGL
Trigger: GAGGCCCGCAGTGAATGCTCAATCCAAGACATGCAT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGAGGGATGGATAACATaGTTTGGGCCTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLREGWIT*FGPLAG
Trigger: GCCTGCCAAAGGCCCAAATCATGTTATCCATCCCTC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATTAGTGGCCTTGGGATaGTTGTCTTGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRLVALG*LSWPGS
Trigger: GCTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATATCGCGTCCGCGGCCTaGGGGAGCGCCGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYIASAA*GSAGLQ
Trigger: TTGGAGTCCGGCGCTCCCTCAGGCCGCGGACGCGAT...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372088.8
CDS-3UTR TCA 90 bp GATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATGGTGCAGTCTAAGCTaGAGTTCTAATAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: DVHRPDACLGLSIHCGPRWCSLS*SSNSWI
Trigger: GATCCAACTATTAGAACTTCAGCTTAGACTGCACCA...TCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR GCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGAGGTCTGTCTGCGGTaGGGTGGAACAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFEVCLR*GGTVRG
Trigger: CCCACGGACTGTTCCACCGCACCGCAGACAGACCTC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR GCA 90 bp GGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTTTTCCCTGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: GLSIHCGPRYVVALLVFPAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...AGGGAAAACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGACATGATTTGGGCCTTTaGCAGGCCTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRHDLGL*QASEMG
Trigger: ACCCATTTCAGAGGCCTGCCAAAGGCCCAAATCATG...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGTGGTCAGGGTGGCTaGGGTGGTAATGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSGQGG*GGNAPV
Trigger: GACAGGAGCATTACCACCTCAGCCACCCTGACCACT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTAGTGGTCAGGGTGGCTaGGGTGGTAATGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLISGQGG*GGNAPV
Trigger: GACAGGAGCATTACCACCTCAGCCACCCTGACCACT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTGGCCTGGAAGCTTTaGGGCTCTAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSLAWKL*GSSWGL
Trigger: CAGCCCCCAACTAGAGCCTCAAAGCTTCCAGGCCAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGAGGTCTGTCTGCGGTaGGGTGGAACAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNEVCLR*GGTVRG
Trigger: CCCACGGACTGTTCCACCGCACCGCAGACAGACCTC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAACCACAGTAGCAAGCTaGAAGCTGCACATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRTTVAS*KLHIKL
Trigger: TAGCTTTATGTGCAGCTTGCAGCTTGCTACTGTGGT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGTCCGTGGGATCCCCTaGAAGGAGCCCTGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKVRGIP*KEPCQG
Trigger: TCCTTGGCAGGGCTCCTTCCAGGGGATCCCACGGAC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGTCCGTGGGATCCCCTaGAAGGAGCCCTGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKVRGIP*KEPCQG
Trigger: TCCTTGGCAGGGCTCCTTCCAGGGGATCCCACGGAC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAACGGTGGAACAGTCCGTaGGATCCCCTGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKRWNSP*DPLEGA
Trigger: GGCTCCTTCCAGGGGATCCCACGGACTGTTCCACCG...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAAAGCTGCAAGGACTTaGGCTGAGACATATAACCCA +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRKAART*AETYNP
Trigger: TGGGTTATATGTCTCAGCCCAAGTCCTTGCAGCTTT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATATAGGGAGAGCCTCTaGTCAAGTCACTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRYRESL*SSHFFH
Trigger: ATGGAAAAAGTGACTTGAGCAGAGGCTCTCCCTATA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTACTTGAGGTCTGTCTaGGGTGCGGTGGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIYLRSV*GAVEQS
Trigger: GGACTGTTCCACCGCACCGCAGACAGACCTCAAGTA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCCTGTCTGCGGTGCGGTaGAACAGTCCGTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFLSAVR*NSPWDP
Trigger: GGGATCCCACGGACTGTTCCACCGCACCGCAGACAG...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAAGTGGTCAGGGTGGCTaGGGTGGTAATGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKSGQGG*GGNAPV
Trigger: GACAGGAGCATTACCACCTCAGCCACCCTGACCACT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAATTGGCCTGGAAGCTTTaGGGCTCTAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKLAWKL*GSSWGL
Trigger: CAGCCCCCAACTAGAGCCTCAAAGCTTCCAGGCCAA...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGAGGGATGGATAACATaGTTTGGGCCTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFEGWIT*FGPLAG
Trigger: GCCTGCCAAAGGCCCAAATCATGTTATCCATCCCTC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTTTTCCCTTTCCATCATGCCAGGTaGTTCTTCCATGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GLSIHCGPRYVVALLVFPFHHAR*FFHEFA
Trigger: TGCAAACTCATGGAAGAATCACCTGGCATGATGGAA...AGGGAAAACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTCGCTCTAGGCCTTTaGATGCTACCAGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSFALGL*MLPADR
Trigger: CCGATCAGCTGGTAGCATGCAAAGGCCTAGAGCGAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTTCGCTCTAGGCCTTTaGATGCTACCAGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIFALGL*MLPADR
Trigger: CCGATCAGCTGGTAGCATGCAAAGGCCTAGAGCGAA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGGATTGAGCATTCACTaGGGGCCTCGATACGTTGTG +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIGLSIH*GPRYVV
Trigger: CACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTAGTGGCCTTGGGATaGTTGTCTTGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSLVALG*LSWPGS
Trigger: GCTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTTAGTGGCCTTGGGATaGTTGTCTTGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLILVALG*LSWPGS
Trigger: GCTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAGTGCTTTGCTGATTTaGCTGACTCTAACAGTATCT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRSALLI*LTLTVS
Trigger: AGATACTGTTAGAGTCAGGCAAATCAGCAAAGCACT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAATCTCCATAACAAAGTaGTTTGCTGATTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRISITK*FADLPD
Trigger: GTCAGGCAAATCAGCAAAGCACTTTGTTATGGAGAT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTGAGTTCCAGAGCAGCTaGAATGGACATGGATACTTG +
Preference number: 4 (lower is better)
Translates to: MSWIEHSLRASIRCGFISEFQSS*NGHGYL
Trigger: CAAGTATCCATGTCCATTGCAGCTGCTCTGGAACTC...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGCTGTCTGCGGTGCGGTaGAACAGTCCGTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMLSAVR*NSPWDP
Trigger: GGGATCCCACGGACTGTTCCACCGCACCGCAGACAG...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
3UTR CAA 72 bp TCAGTGTCTGTAACACCATTTATGCTACAGGAACATTaGGAAGTGACAGCTGTAGGGGGATCACGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVSVTPFMLQEH*EVTAVGGSRSL
Trigger: GAGAGAGCGTGATCCCCCTACAGCTGTCACTTCCAAATGTTCCTGTAGCATAAATGGTGTTACAGACACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAACAGCAGTGCAATCCTaGACCATGTGCCGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKTAVQS*TMCRRV
Trigger: GACCCTTCGGCACATGGTTCAGGATTGCACTGCTGT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGACTCGGGAGGTGTCTaGAGAGAAGTGGGTATAAAC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIDSGGV*REVGIN
Trigger: GTTTATACCCACTTCTCTTCAGACACCTCCCGAGTC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTCCCACTGGCGGAGACTaGTTTCTTCCAACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSPTGGD*FLPTLL
Trigger: TAAGAGAGTTGGAAGAAATCAGTCTCCGCCAGTGGG...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGTCCTACTTGGAGATaGTTCAGAAACTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSPTWR*FRNWRR
Trigger: CCGCCTCCAGTTTCTGAATCATCTCCAAGTAGGACT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTGGCCTGGAAGCTTTaGGGCTCTAGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFLAWKL*GSSWGL
Trigger: CAGCCCCCAACTAGAGCCTCAAAGCTTCCAGGCCAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAACCAGGATATAAAATaGAGGAGCCAAACTAGTAGA +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRNQDIK*RSQTSR
Trigger: TCTACTAGTTTGGCTCCTTCATTTTATATCCTGGTT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGCTTTCTCCAGAACTaGTTCTGGTGGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSFLQN*FWWHRS
Trigger: ACTCCTGTGCCACCAGAAGCAGTTCTGGAGAAAGCT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTAAAGTACATCCCCAGTaGCCTAGAGACCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFKVHPQ*PRDQET
Trigger: GGTTTCCTGGTCTCTAGGGCACTGGGGATGTACTTT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAAAGTACATCCCCAGTaGCCTAGAGACCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSKVHPQ*PRDQET
Trigger: GGTTTCCTGGTCTCTAGGGCACTGGGGATGTACTTT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAATCAAACATATCCTGTaGTGGCCCATTTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRIKHIL*WPIFMF
Trigger: AAACATGAAAATGGGCCACCACAGGATATGTTTGAT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTCATGATTTGGGCCTTTaGCAGGCCTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIHDLGL*QASEMG
Trigger: ACCCATTTCAGAGGCCTGCCAAAGGCCCAAATCATG...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGTGCACATGGTAGCATaGAGGTTCCACACCTACCTT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSVHMVA*RFHTYL
Trigger: AAGGTAGGTGTGGAACCTCCATGCTACCATGTGCAC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCACAGCAGTGCAATCCTaGACCATGTGCCGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFTAVQS*TMCRRV
Trigger: GACCCTTCGGCACATGGTTCAGGATTGCACTGCTGT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGGATGTGCACCGCCCTaGTGCATGTCTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYGCAPP*CMSWIE
Trigger: CTCAATCCAAGACATGCATCAGGGCGGTGCACATCC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTACCAGGAAACCAGTATaGCAACTCTGCTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFTRKPV*QLCSET
Trigger: GGTTTCTGAGCAGAGTTGTCATACTGGTTTCCTGGT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTACTTGAGGTCTGTCTaGGGTGCGGTGGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYYLRSV*GAVEQS
Trigger: GGACTGTTCCACCGCACCGCAGACAGACCTCAAGTA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000543283.2
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGGATTGAGCATTCACTaGGGGCCTCGATACGTTGTG +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKGLSIH*GPRYVV
Trigger: CACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTATGCCCACTTACAACTaGAGCCATCATGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSMPTYN*SHHGSS
Trigger: AGATGACCCATGATGGCTGCAGTTGTAAGTGGGCAT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTATGCCCACTTACAACTaGAGCCATCATGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFMPTYN*SHHGSS
Trigger: AGATGACCCATGATGGCTGCAGTTGTAAGTGGGCAT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAGTAAATTGAAATGGTaGTGCAGCCTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRSKLKW*CSLIDL
Trigger: AAGATCAATAAGGCTGCAGCACCATTTCAATTTACT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTCTCATAGCTCCCAACTaGATGGACATTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFLIAPN*MDISNG
Trigger: CCCATTGGAAATGTCCATCCAGTTGGGAGCTATGAG...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTCCGAACATTTCTGTCTaGTCGGTCAAAGCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSPNISV*SVKAVH
Trigger: ATGAACCGCTTTGACCGACCAGACAGAAATGTTCGG...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTCCGAACATTTCTGTCTaGTCGGTCAAAGCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFPNISV*SVKAVH
Trigger: ATGAACCGCTTTGACCGACCAGACAGAAATGTTCGG...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTTGCAGGCTTTCAATaGAACCTCCACCACAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSFAGFQ*NLHHSS
Trigger: GCTACTGTGGTGGAGGTTCCATTGAAAGCCTGCAAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTTTGCAGGCTTTCAATaGAACCTCCACCACAGTAGC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIFAGFQ*NLHHSS
Trigger: GCTACTGTGGTGGAGGTTCCATTGAAAGCCTGCAAA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATTTCTATCCAGTGAATaGCAAATTCATCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRFLSSE*QIHLIG
Trigger: ACCTATCAGATGAATTTGCCATTCACTGGATAGAAA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGAAAGTAAATTGAAATaGTGCTGCAGCCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRESKLK*CCSLID
Trigger: ATCAATAAGGCTGCAGCACCATTTCAATTTACTTTC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTCAACAAACATCTTCTaGGCCTGGAAAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLISTNIF*AWKKGI
Trigger: GATGCCCTTTTTCCAGGCTCAGAAGATGTTTGTTGA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGACAGCAGTGCAATCCTaGACCATGTGCCGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMTAVQS*TMCRRV
Trigger: GACCCTTCGGCACATGGTTCAGGATTGCACTGCTGT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAACCCACTGGCGGAGACTaGTTTCTTCCAACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKPTGGD*FLPTLL
Trigger: TAAGAGAGTTGGAAGAAATCAGTCTCCGCCAGTGGG...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGAAGGCTGTAGTACTTaGGGAGGAATTCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKEGCST*GGIRLQ
Trigger: CTGGAGACGAATTCCTCCTCAAGTACTACAGCCTTC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372088.8
CDS-3UTR TCA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTTTGAATATCATGCAATaGACCACTTCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: MSWIEHSLRASIRCGFISLNIMQ*TTSIMP
Trigger: TGGCATGATGGAAGTGGTTCATTGCATGATATTCAA...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAGCTTTCTCCAGAACTaGTTCTGGTGGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKSFLQN*FWWHRS
Trigger: ACTCCTGTGCCACCAGAAGCAGTTCTGGAGAAAGCT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGAGTTTTTACAGCAGTaGAATCCTGAACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIEFLQQ*NPEPCA
Trigger: GGCACATGGTTCAGGATTGCACTGCTGTAAAAACTC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGCTTTCTTCCGGATGTaGACCGCCCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKAFFRM*TALMHV
Trigger: GACATGCATCAGGGCGGTGCACATCCGGAAGAAAGC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTACCACAGTAGCAAGCTaGAAGCTGCACATAAAGCTA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSTTVAS*KLHIKL
Trigger: TAGCTTTATGTGCAGCTTGCAGCTTGCTACTGTGGT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTCGTTCTGAACTTCACTaGTTCTCCATCAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIRSELH*FSIRSA
Trigger: AGCACTTCTGATGGAGAAGCAGTGAAGTTCAGAACG...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATAAAGTACATCCCCAGTaGCCTAGAGACCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNKVHPQ*PRDQET
Trigger: GGTTTCCTGGTCTCTAGGGCACTGGGGATGTACTTT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGACATATAACCCACTaGCGGAGACTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSRHITH*RRLISS
Trigger: GGAAGAAATCAGTCTCCGCCAGTGGGTTATATGTCT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGTGCACATGGTAGCATaGAGGTTCCACACCTACCTT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNVHMVA*RFHTYL
Trigger: AAGGTAGGTGTGGAACCTCCATGCTACCATGTGCAC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTCCAAAAACCTTCCTaGGGCTGCCGAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKFQKPS*GCRTFL
Trigger: CAGAAATGTTCGGCAGCCTCAGGAAGGTTTTTGGAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATGCATGTCTTGGATTaGGCATTCACTGCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKMHVLD*AFTAGL
Trigger: GAGGCCCGCAGTGAATGCTCAATCCAAGACATGCAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCCCACTGGCGGAGACTaGTTTCTTCCAACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYPTGGD*FLPTLL
Trigger: TAAGAGAGTTGGAAGAAATCAGTCTCCGCCAGTGGG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTCTAAGGGTTCAAGCCTaGATTACCAGCAAAACTCTA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSLRVQA*ITSKTL
Trigger: TAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTTAG...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTCTAAGGGTTCAAGCCTaGATTACCAGCAAAACTCTA +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLILRVQA*ITSKTL
Trigger: TAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTTAG...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGATTGAGCATTCACTaGGGGCCTCGATACGTTGTG +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGLSIH*GPRYVV
Trigger: CACAACGTATCGAGGCCCGCAGTGAATGCTCAATCC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAATGCCCACTTACAACTaGAGCCATCATGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKMPTYN*SHHGSS
Trigger: AGATGACCCATGATGGCTGCAGTTGTAAGTGGGCAT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTATGATAGAACATGTATaGCCACTTACAACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSMIEHV*PLTTAA
Trigger: GGCTGCAGTTGTAAGTGGGCATACATGTTCTATCAT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAACTCATAGCTCCCAACTaGATGGACATTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLIAPN*MDISNG
Trigger: CCCATTGGAAATGTCCATCCAGTTGGGAGCTATGAG...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCATGATTTGGGCCTTTaGCAGGCCTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYHDLGL*QASEMG
Trigger: ACCCATTTCAGAGGCCTGCCAAAGGCCCAAATCATG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTGCATGCTACCAGCTaGTCGGTTTCCATAAAATCC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLHATS*SVSIKS
Trigger: GGATTTTATGGAAACCGATCAGCTGGTAGCATGCAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTCCAAAAACCTTCCTaGGGCTGCCGAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYFQKPS*GCRTFL
Trigger: CAGAAATGTTCGGCAGCCTCAGGAAGGTTTTTGGAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTCAACAAACATCTTCTaGGCCTGGAAAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNSTNIF*AWKKGI
Trigger: GATGCCCTTTTTCCAGGCTCAGAAGATGTTTGTTGA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTTGAATATCATGCAATaGACCACTTCCATCATGCTG +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFLNIMQ*TTSIML
Trigger: CAGCATGATGGAAGTGGTTCATTGCATGATATTCAA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGACTCGGGAGGTGTCTaGAGAGAAGTGGGTATAAAC +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKDSGGV*REVGIN
Trigger: GTTTATACCCACTTCTCTTCAGACACCTCCCGAGTC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGAGTCCTACTTGGAGATaGTTCAGAAACTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMSPTWR*FRNWRR
Trigger: CCGCCTCCAGTTTCTGAATCATCTCCAAGTAGGACT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTGTGAACAGCTGTACTaGTATCTTCAAACAGCAACA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSCEQLY*YLQTAT
Trigger: TGTTGCTGTTTGAAGATATCAGTACAGCTGTTCACA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATACCAGGAAACCAGTATaGCAACTCTGCTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYTRKPV*QLCSET
Trigger: GGTTTCTGAGCAGAGTTGTCATACTGGTTTCCTGGT...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTGAGTACTTCTGGCTaGCGGGAATTTCTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLSTSG*REFLVS
Trigger: GCTAACAAGAAATTCCCGGCAGCCAGAAGTACTCAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCCACATTTTCAAGAGGTaGATCCTCAGGCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFHIFKR*ILRQIH
Trigger: GTGGATCTGCCTGAGGATGCACCTCTTGAAAATGTG...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGTACAAGATTTGTCTTaGTCACCTCTTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFVQDLS*SPLTKS
Trigger: GGATTTGGTAAGAGGTGAGCAAGACAAATCTTGTAC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAACGTTCTGAACTTCACTaGTTCTCCATCAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKRSELH*FSIRSA
Trigger: AGCACTTCTGATGGAGAAGCAGTGAAGTTCAGAACG...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGTGCTTTGCTGATTTaGCTGACTCTAACAGTATCT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSALLI*LTLTVS
Trigger: AGATACTGTTAGAGTCAGGCAAATCAGCAAAGCACT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTATCTCCATAACAAAGTaGTTTGCTGATTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIISITK*FADLPD
Trigger: GTCAGGCAAATCAGCAAAGCACTTTGTTATGGAGAT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATCATTGTGTTACCGGCTaGCTACTCAGACATAGTTGT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNHCVTG*LLRHSC
Trigger: ACAACTATGTCTGAGTAGGCAGCCGGTAACACAATG...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543283.2
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTAAACATATCCTGTGGTaGCCCATTTTCATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIKHILW*PIFMFL
Trigger: GAGAAACATGAAAATGGGCCACCACAGGATATGTTT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCCGAACATTTCTGTCTaGTCGGTCAAAGCGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYPNISV*SVKAVH
Trigger: ATGAACCGCTTTGACCGACCAGACAGAAATGTTCGG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTTGCAGGCTTTCAATaGAACCTCCACCACAGTAGC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYFAGFQ*NLHHSS
Trigger: GCTACTGTGGTGGAGGTTCCATTGAAAGCCTGCAAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAACAACTGCAGCCATCATaGGTCATCTCCATAACAAAG +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKQLQPS*VISITK
Trigger: CTTTGTTATGGAGATGACCCATGATGGCTGCAGTTG...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTTGTGGAGGAGGATTTaGCACAGAGTTGATTTACAT +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFLWRRI*HRVDLH
Trigger: ATGTAAATCAACTCTGTGCCAAATCCTCCTCCACAA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTTACCAAGGAGAAAGTaGGTAAGCTTATTCCCAACA +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFLPRRK*VSLFPT
Trigger: TGTTGGGAATAAGCTTACCCACTTTCTCCTTGGTAA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGTGATTTTGGAGTATTaGTCGAAGAATATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSVILEY*SKNMKS
Trigger: GGACTTCATATTCTTCGATCAATACTCCAAAATCAC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTTCCAAAAACCTTCCTaGGGCTGCCGAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKFQKPS*GCRTFL
Trigger: CAGAAATGTTCGGCAGCCTCAGGAAGGTTTTTGGAA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAACTAAGGGTTCAAGCCTaGATTACCAGCAAAACTCTA +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKLRVQA*ITSKTL
Trigger: TAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTTAG...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGCAGATTTACTGAACTaGCAAGTGACCCAAAGCATA +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKADLLN*QVTQSI
Trigger: TATGCTTTGGGTCACTTGTCAGTTCAGTAAATCTGC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGGGAATATATTTCTGTaGACAGCTGTACTGATATCT +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIGNIFL*TAVLIS
Trigger: AGATATCAGTACAGCTGTTCACAGAAATATATTCCC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTGAGTACTTCTGGCTaGCGGGAATTTCTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYLSTSG*REFLVS
Trigger: GCTAACAAGAAATTCCCGGCAGCCAGAAGTACTCAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGCACATTTTCAAGAGGTaGATCCTCAGGCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMHIFKR*ILRQIH
Trigger: GTGGATCTGCCTGAGGATGCACCTCTTGAAAATGTG...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTATAGGGAGAGCCTCTaGTCAAGTCACTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNYRESL*SSHFFH
Trigger: ATGGAAAAAGTGACTTGAGCAGAGGCTCTCCCTATA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGAGTTTTTACAGCAGTaGAATCCTGAACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYEFLQQ*NPEPCA
Trigger: GGCACATGGTTCAGGATTGCACTGCTGTAAAAACTC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGGGGCGGAGCTTAGATaGTTTCAGATTCTGATTATT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNGAELR*FQILII
Trigger: AATAATCAGAATCTGAAAGCATCTAAGCTCCGCCCC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTATAGTTGTAGATTGGTaGCCACCATCAGAATCATTT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSIVVDW*PPSESF
Trigger: AAATGATTCTGATGGTGGGCACCAATCTACAACTAT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGCCCATTGAGTACTTCTaGCTGCCGGGAATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKPIEYF*LPGISC
Trigger: ACAAGAAATTCCCGGCAGCCAGAAGTACTCAATGGG...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTTTTCAATCAGTTCTTaGTCCTTATTAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIFSISS*SLLAAL
Trigger: CAGAGCTGCTAATAAGGACCAAGAACTGATTGAAAA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTATCAAACATATCCTGTaGTGGCCCATTTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIIKHIL*WPIFMF
Trigger: AAACATGAAAATGGGCCACCACAGGATATGTTTGAT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATAGACATATAACCCACTaGCGGAGACTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYRHITH*RRLISS
Trigger: GGAAGAAATCAGTCTCCGCCAGTGGGTTATATGTCT...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAAAGCTGCAAGGACTTaGGCTGAGACATATAACCCA +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFKAART*AETYNP
Trigger: TGGGTTATATGTCTCAGCCCAAGTCCTTGCAGCTTT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGTGACTTTTTACAAGTaGGAGTCCTACTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKVTFYK*ESYLEM
Trigger: CATCTCCAAGTAGGACTCCCACTTGTAAAAAGTCAC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGAAACACTTTCAGTCTaGGGAATTTGGGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFETLSV*GIWEMN
Trigger: ATTCATTTCCCAAATTCCCCAGACTGAAAGTGTTTC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCAACTGCAGCCATCATaGGTCATCTCCATAACAAAG +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYQLQPS*VISITK
Trigger: CTTTGTTATGGAGATGACCCATGATGGCTGCAGTTG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCCAACTGCAGCCATCATaGGTCATCTCCATAACAAAG +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFQLQPS*VISITK
Trigger: CTTTGTTATGGAGATGACCCATGATGGCTGCAGTTG...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGAACAGTAACATTAGCTaGCTGACCCTGGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKNSNIS*LTLARK
Trigger: TTTCCTTGCCAGGGTCAGTCAGCTAATGTTACTGTT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGCAGATTTACTGAACTaGCAAGTGACCCAAAGCATA +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFADLLN*QVTQSI
Trigger: TATGCTTTGGGTCACTTGTCAGTTCAGTAAATCTGC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTGTGAACAGCTGTACTaGTATCTTCAAACAGCAACA +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNCEQLY*YLQTAT
Trigger: TGTTGCTGTTTGAAGATATCAGTACAGCTGTTCACA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATCCATTTGGCATTGGCTaGAATGTACTTCTTACAGAT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNPFGIG*NVLLTD
Trigger: ATCTGTAAGAAGTACATTGCAGCCAATGCCAAATGG...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTATAGGGAGAGCCTCTaGTCAAGTCACTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFYRESL*SSHFFH
Trigger: ATGGAAAAAGTGACTTGAGCAGAGGCTCTCCCTATA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGGGGCGGAGCTTAGATaGTTTCAGATTCTGATTATT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYGAELR*FQILII
Trigger: AATAATCAGAATCTGAAAGCATCTAAGCTCCGCCCC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTATATTTTTGGTCAGCTaGTCAAAACAAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFIFLVS*SKQTFS
Trigger: GGAGAATGTTTGTTTTGAGCAGCTGACCAAAAATAT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAGTGCTTTGCTGATTTaGCTGACTCTAACAGTATCT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKSALLI*LTLTVS
Trigger: AGATACTGTTAGAGTCAGGCAAATCAGCAAAGCACT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGTAAATTGAAATGGTaGTGCAGCCTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSKLKW*CSLIDL
Trigger: AAGATCAATAAGGCTGCAGCACCATTTCAATTTACT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTTTTTGTTCCATACTTTaGCAACTTGGAACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFFCSIL*QLGTQK
Trigger: TTTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAA...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTTTGTTCCATACTTTaGCAACTTGGAACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSFCSIL*QLGTQK
Trigger: TTTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAAACATATCCTGTGGTaGCCCATTTTCATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKKHILW*PIFMFL
Trigger: GAGAAACATGAAAATGGGCCACCACAGGATATGTTT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATATGAATTTTCTGACGTaGAGAGGGATGGATAACATG +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNMNFLT*RGMDNM
Trigger: CATGTTATCCATCCCTCTCCACGTCAGAAAATTCAT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTAAAATGGCTATCATaGATCCACAAGCCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLKWLS*IHKPKG
Trigger: ACCCTTAGGCTTGTGGATCCATGATAGCCATTTTAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAAACCACTAAGTCACTaGTTTTACTTTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: ALLICLTLTVSGLCEERSKPLSH*FYFRGI
Trigger: TATTCCCCTAAAGTAAAACCAGTGACTTAGTGGTTT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAATTGTGGAGGAGGATTTaGCACAGAGTTGATTTACAT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKLWRRI*HRVDLH
Trigger: ATGTAAATCAACTCTGTGCCAAATCCTCCTCCACAA...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGAAAGTAAATTGAAATaGTGCTGCAGCCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIESKLK*CCSLID
Trigger: ATCAATAAGGCTGCAGCACCATTTCAATTTACTTTC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTACCAAGGAGAAAGTaGGTAAGCTTATTCCCAACA +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKLPRRK*VSLFPT
Trigger: TGTTGGGAATAAGCTTACCCACTTTCTCCTTGGTAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTTGTTCTTAAAAGTTaGAAGAATCGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFFVLKS*KNRAEV
Trigger: GACCTCCGCACGATTCTTTCAACTTTTAAGAACAAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTGAATATCATGCAATaGACCACTTCCATCATGCTG +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFLNIMQ*TTSIML
Trigger: CAGCATGATGGAAGTGGTTCATTGCATGATATTCAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATTGTTGTGATTATTGGTaGCTTTTTACAAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNCCDYW*LFTSGS
Trigger: ACTCCCACTTGTAAAAAGTCACCAATAATCACAACA...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATATGGTTTCTATCCAGTaGATGGCAAATTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNMVSIQ*MANSSD
Trigger: ATCAGATGAATTTGCCATTCACTGGATAGAAACCAT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAATGGTTTCTATCCAGTaGATGGCAAATTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKMVSIQ*MANSSD
Trigger: ATCAGATGAATTTGCCATTCACTGGATAGAAACCAT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCCTCTTTCACGAATGTaGAACTTAACAAACCCCATA +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYPLSRM*NLTNPI
Trigger: TATGGGGTTTGTTAAGTTTCACATTCGTGAAAGAGG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGGGAATATATTTCTGTaGACAGCTGTACTGATATCT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNGNIFL*TAVLIS
Trigger: AGATATCAGTACAGCTGTTCACAGAAATATATTCCC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATCCATTTGGCATTGGCTaGAATGTACTTCTTACAGAT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYPFGIG*NVLLTD
Trigger: ATCTGTAAGAAGTACATTGCAGCCAATGCCAAATGG...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATCTCTTCGACACCTTGTaGACAAAGCTGATATTTATT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNLFDTL*TKLIFI
Trigger: AATAAATATCAGCTTTGTGCACAAGGTGTCGAAGAG...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGGGCGGAGCTTAGATaGTTTCAGATTCTGATTATT +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGAELR*FQILII
Trigger: AATAATCAGAATCTGAAAGCATCTAAGCTCCGCCCC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAAAACAATCCCCAGAATaGAAATTGCCATTTGGATTC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKKQSPE*KLPFGF
Trigger: GAATCCAAATGGCAATTTGCATTCTGGGGATTGTTT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGTACAAGATTTGTCTTaGTCACCTCTTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYVQDLS*SPLTKS
Trigger: GGATTTGGTAAGAGGTGAGCAAGACAAATCTTGTAC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGTACAAGATTTGTCTTaGTCACCTCTTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFVQDLS*SPLTKS
Trigger: GGATTTGGTAAGAGGTGAGCAAGACAAATCTTGTAC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATGATAGAACATGTATaGCCACTTACAACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKMIEHV*PLTTAA
Trigger: GGCTGCAGTTGTAAGTGGGCATACATGTTCTATCAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATATAGTTGTAGATTGGTaGCCACCATCAGAATCATTT +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNIVVDW*PPSESF
Trigger: AAATGATTCTGATGGTGGGCACCAATCTACAACTAT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGAAACACTTTCAGTCTaGGGAATTTGGGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKETLSV*GIWEMN
Trigger: ATTCATTTCCCAAATTCCCCAGACTGAAAGTGTTTC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGGAAAAGTGACATGCTaGGAATATATTTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKGKVTC*EYISVN
Trigger: GTTCACAGAAATATATTCCCAGCATGTCACTTTTCC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGGAAAAGTGACATGCTaGGAATATATTTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNGKVTC*EYISVN
Trigger: GTTCACAGAAATATATTCCCAGCATGTCACTTTTCC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTTTGTTCTTAAAAGTTaGAAGAATCGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKFVLKS*KNRAEV
Trigger: GACCTCCGCACGATTCTTTCAACTTTTAAGAACAAA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGTGATTTTGGAGTATTaGTCGAAGAATATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFVILEY*SKNMKS
Trigger: GGACTTCATATTCTTCGATCAATACTCCAAAATCAC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR TCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTGTTGTGATTATTGGTaGCTTTTTACAAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFCCDYW*LFTSGS
Trigger: ACTCCCACTTGTAAAAAGTCACCAATAATCACAACA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAATATTTTTGGTCAGCTaGTCAAAACAAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKIFLVS*SKQTFS
Trigger: GGAGAATGTTTGTTTTGAGCAGCTGACCAAAAATAT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTTTCAATCAGTTCTTaGTCCTTATTAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYFSISS*SLLAAL
Trigger: CAGAGCTGCTAATAAGGACCAAGAACTGATTGAAAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTTAAAATGGCTATCATaGATCCACAAGCCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKLKWLS*IHKPKG
Trigger: ACCCTTAGGCTTGTGGATCCATGATAGCCATTTTAA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGTTAAAATGGCTATCATaGATCCACAAGCCTAAGGGT +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMLKWLS*IHKPKG
Trigger: ACCCTTAGGCTTGTGGATCCATGATAGCCATTTTAA...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAAACCACTAAGTCACTaGTTTTACTTTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKKPLSH*FYFRGI
Trigger: TATTCCCCTAAAGTAAAACCAGTGACTTAGTGGTTT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTTGTGGAGGAGGATTTaGCACAGAGTTGATTTACAT +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKLWRRI*HRVDLH
Trigger: ATGTAAATCAACTCTGTGCCAAATCCTCCTCCACAA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGACAATAAATGGTTTGTaGAGGAGGATTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMTINGL*RRIWHR
Trigger: TCTGTGCCAAATCCTCCTCCACAAACCATTTATTGT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCGGAAAAGTGACATGCTaGGAATATATTTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFGKVTC*EYISVN
Trigger: GTTCACAGAAATATATTCCCAGCATGTCACTTTTCC...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGAAAGTAAATTGAAATaGTGCTGCAGCCTTATTGAT +
Preference number: 4 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKESKLK*CCSLID
Trigger: ATCAATAAGGCTGCAGCACCATTTCAATTTACTTTC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGTTACCAAGGAGAAAGTaGGTAAGCTTATTCCCAACA +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMLPRRK*VSLFPT
Trigger: TGTTGGGAATAAGCTTACCCACTTTCTCCTTGGTAA...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGAACCAGGATATAAAATaGAGGAGCCAAACTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKNQDIK*RSQTSR
Trigger: TCTACTAGTTTGGCTCCTTCATTTTATATCCTGGTT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR TCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGGGAATATATTTCTGTaGACAGCTGTACTGATATCT +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMGNIFL*TAVLIS
Trigger: AGATATCAGTACAGCTGTTCACAGAAATATATTCCC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCATATTTTTGGTCAGCTaGTCAAAACAAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFIFLVS*SKQTFS
Trigger: GGAGAATGTTTGTTTTGAGCAGCTGACCAAAAATAT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR GCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATAGTAAATTGAAATGGTaGTGCAGCCTTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYSKLKW*CSLIDL
Trigger: AAGATCAATAAGGCTGCAGCACCATTTCAATTTACT...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGAAACACTTTCAGTCTaGGGAATTTGGGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMETLSV*GIWEMN
Trigger: ATTCATTTCCCAAATTCCCCAGACTGAAAGTGTTTC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCTTTCTATCCAGTGAATaGCAAATTCATCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFFLSSE*QIHLIG
Trigger: ACCTATCAGATGAATTTGCCATTCACTGGATAGAAA...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTTCTATCCAGTGAATaGCAAATTCATCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYFLSSE*QIHLIG
Trigger: ACCTATCAGATGAATTTGCCATTCACTGGATAGAAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTGGTACATAAGAGTATaGTACAAGATTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYWYIRV*YKICLA
Trigger: AGCAAGACAAATCTTGTACCATACTCTTATGTACCA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCAAACCACTAAGTCACTaGTTTTACTTTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFKPLSH*FYFRGI
Trigger: TATTCCCCTAAAGTAAAACCAGTGACTTAGTGGTTT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CCA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGTGGTACATAAGAGTATaGTACAAGATTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMWYIRV*YKICLA
Trigger: AGCAAGACAAATCTTGTACCATACTCTTATGTACCA...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGATGCATGTCTTGGATaGAGCATTCACTGCGGGCCT +
Preference number: 5 (lower is better)
Translates to: HRPDACLGLSIHCGPRYVDACLG*SIHCGP
Trigger: AGGCCCGCAGTGAATGCTCAATCCAAGACATGCATC...AACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATGCAGTGAGCCGAGATaGCGCCACTGTAATCCAGCC +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRCSEPR*RHCNPA
Trigger: GGCTGGATTACAGTGGCGCAATCTCGGCTCACTGCA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTCCGGATGTGCACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LPDVHRPDACLGLSIHCGTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...CCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTGCACATCCGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAAAATGTTCATTCCCATaGAGTACTTCTGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRKCSFP*STSGCR
Trigger: CCGGCAGCCAGAAGTACTCAATGGGAATGAACATTT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAGGTGCTGCAGCCTTATaGATCTTAATTGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRGAAAL*ILIASL
Trigger: CAGGCTTGCAATTAAGATCAATAAGGCTGCAGCACC...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CACCGCCCTGATGCATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTTTCCTCTTTACATTTTaGGTGGCAGATATGCTGAGT +
Preference number: 5 (lower is better)
Translates to: HRPDACLGLSIHCGPRYVFLFTF*VADMLS
Trigger: ACTCAGCATATCTGCCACCAAAAATGTAAAGAGGAA...AACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACATGCATCAGGGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTGCAGTGAGCCGAGATaGCGCCACTGTAATCCAGCC +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLICSEPR*RHCNPA
Trigger: GGCTGGATTACAGTGGCGCAATCTCGGCTCACTGCA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATTCCTCTTTACATTTTaGGTGGCAGATATGCTGAGT +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRFLFTF*VADMLS
Trigger: ACTCAGCATATCTGCCACCAAAAATGTAAAGAGGAA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTGATGCATGTCTTGGATaGAGCATTCACTGCGGGCCT +
Preference number: 5 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFDACLG*SIHCGP
Trigger: AGGCCCGCAGTGAATGCTCAATCCAAGACATGCATC...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGATTCAGTCTGGGGAATTaGGGAAATGAATCAACAGTA +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRFSLGN*GNESTV
Trigger: TACTGTTGATTCATTTCCCAAATTCCCCAGACTGAA...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATGCAGTGAGCCGAGATaGCGCCACTGTAATCCAGCC +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKCSEPR*RHCNPA
Trigger: GGCTGGATTACAGTGGCGCAATCTCGGCTCACTGCA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GTACATCCCCAGTGCCCTAGAGACCAGGAAACCAGTATGACAACTCTGCTCAGAATTTGCAAGATTTGTTaGACTAGATGTTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VHPQCPRDQETSMTTLLRICKIC*TRCWLK
Trigger: CTTCAGCCAACATCTAGTCAAACAAATCTTGCAAAT...TCTGAGCAGAGTTGTCATACTGGTTTCCTGGTCTCTAGGGCACTGGGGATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGTGGCCTTGGGATGCTaGTCTTGGCCTGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNVALGC*SWPGSF
Trigger: AAAGCTTCCAGGCCAAGACAAGCATCCCAAGGCCAC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTGCTGCCGGGAATTTCTaGTTAGCATACTTGACCGTA +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIAAGNF*LAYLTV
Trigger: TACGGTCAAGTATGCTAACAAGAAATTCCCGGCAGC...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTAAATGTTCATTCCCATaGAGTACTTCTGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFKCSFP*STSGCR
Trigger: CCGGCAGCCAGAAGTACTCAATGGGAATGAACATTT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGATGCATGTCTTGGATaGAGCATTCACTGCGGGCCT +
Preference number: 5 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNDACLG*SIHCGP
Trigger: AGGCCCGCAGTGAATGCTCAATCCAAGACATGCATC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGTTGTGTTAGTGGCCTaGGGATGCTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKVVLVA*GCLSWP
Trigger: AGGCCAAGACAAGCATCCCAAGGCCACTAACACAAC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGTTGTGTTAGTGGCCTaGGGATGCTTGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNVVLVA*GCLSWP
Trigger: AGGCCAAGACAAGCATCCCAAGGCCACTAACACAAC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTATGCTACAGGAACATTaGGAAGTGACAGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFMLQEH*EVTAVG
Trigger: CCCTACAGCTGTCACTTCCAAATGTTCCTGTAGCAT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTTACACCTGGGCCATTaGGTAAAGCCAACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSLHLGH*VKPTSF
Trigger: GAAAGAAGTTGGCTTTACCAAATGGCCCAGGTGTAA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGTGGCCTTGGGATGCTaGTCTTGGCCTGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKVALGC*SWPGSF
Trigger: AAAGCTTCCAGGCCAAGACAAGCATCCCAAGGCCAC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTGATTCTTCCATGAGTTaGCAAAAACTGAGATCTTCC +
Preference number: 5 (lower is better)
Translates to: MSWIEHSLRASIRCGFISDSSMS*QKLRSS
Trigger: GGAAGATCTCAGTTTTTGCAAACTCATGGAAGAATC...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CAA 90 bp ATGTCTTGGATTGAGCATTCACTGCGGGCCTCGATACGTTGTGGCTTTATTAGTGGCAGATATGCTGAGTaGCTGATAAAGATTAATGCT +
Preference number: 5 (lower is better)
Translates to: MSWIEHSLRASIRCGFISGRYAE*LIKINA
Trigger: AGCATTAATCTTTATCAGCAACTCAGCATATCTGCC...ACTAATAAAGCCACAACGTATCGAGGCCCGCAGTGAATGCTCAATCCAAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466105.5
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTCCATACTTTGGCAACTaGGAACCCAAAAATGTCTTG +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIPYFGN*EPKNVL
Trigger: CAAGACATTTTTGGGTTCCAAGTTGCCAAAGTATGG...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAGCTGCCGGGAATTTCTaGTTAGCATACTTGACCGTA +
Preference number: 5 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKAAGNF*LAYLTV
Trigger: TACGGTCAAGTATGCTAACAAGAAATTCCCGGCAGC...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGGCAGATATGCTGAGTaGCAAGCTGAAGTTCTAATA +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSGRYAE*QAEVLI
Trigger: TATTAGAACTTCAGCTTGCAACTCAGCATATCTGCC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTAGTATGGTACAAGATTaGTCTTGCTCACCTCTTACC +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSMVQD*SCSPLT
Trigger: GGTAAGAGGTGAGCAAGACAAATCTTGTACCATACT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCCTTAAAATCATCTGCACCTGTACCAATAAACTCCTTAGGCCAAGCCTTCTTTAAGACAATAAATGGTTaGTGGAGGAGGATTTGGCAC +
Preference number: 5 (lower is better)
Translates to: ALKSSAPVPINSLGQAFFKTING*WRRIWH
Trigger: GTGCCAAATCCTCCTCCACAAACCATTTATTGTCTT...AAAGAAGGCTTGGCCTAAGGAGTTTATTGGTACAGGTGCAGATGATTTTAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTTCAAAGCGGTTCATATaGTCACACTCCACCAAATAC +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSSKRFI*SHSTKY
Trigger: GTATTTGGTGGAGTGTGACAATATGAACCGCTTTGA...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAAGGCTCTTCGACACCTaGTGCACAAAGCTGATATTT +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKRLFDT*CTKLIF
Trigger: AAATATCAGCTTTGTGCACAAGGTGTCGAAGAGCCT...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAACCATACTTTGGCAACTaGGAACCCAAAAATGTCTTG +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKPYFGN*EPKNVL
Trigger: CAAGACATTTTTGGGTTCCAAGTTGCCAAAGTATGG...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTATTTTGTTCCATACTTaGGCAACTTGGAACCCAAAA +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIILFHT*ATWNPK
Trigger: TTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAAT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTATTTGCAAGATTTGTTaGACTAGATGTTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSICKIC*TRCWLK
Trigger: CTTCAGCCAACATCTAGTCAAACAAATCTTGCAAAT...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTATTTGCAAGATTTGTTaGACTAGATGTTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIICKIC*TRCWLK
Trigger: CTTCAGCCAACATCTAGTCAAACAAATCTTGCAAAT...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GATGGGGGAGGGGGAGAATATTATGAACTCCAGCTTTCTCAAGATAGTCTTATTTACCCCATCAAAGTTTaGTGCAAATGTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DGGGGEYYELQLSQDSLIYPIKV*CKCFKF
Trigger: GAACTTGAAACATTTGCACAAAACTTTGATGGGGTA...AATAAGACTATCTTGAGAAAGCTGGAGTTCATAATATTCTCCCCCTCCCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATGGTACAAGATTTGTCTaGCTCACCTCTTACCAAATC +
Preference number: 5 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNGTRFV*LTSYQI
Trigger: GATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACC...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAAGTATGGTACAAGATTaGTCTTGCTCACCTCTTACC +
Preference number: 5 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKSMVQD*SCSPLT
Trigger: GGTAAGAGGTGAGCAAGACAAATCTTGTACCATACT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp GCTTTGCTGATTTGCCTGACTCTAACAGTATCTGGACTATGTGAAGAACGTTCTGGATTTGGCACAGAGTaGATTTACATTAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: ALLICLTLTVSGLCEERSGFGTE*IYINRS
Trigger: GCTTCTATTAATGTAAATCAACTCTGTGCCAAATCC...AGAACGTTCTTCACATAGTCCAGATACTGTTAGAGTCAGGCAAATCAGCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TGCTGGTACATAAGAGTATGGTACAAGATTTGTCTTGCTCACCTCTTACCAAATAAGACAATAAATGGTTaGTGGAGGAGGATTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CWYIRVWYKICLAHLLPNKTING*WRRIWH
Trigger: GTGCCAAATCCTCCTCCACAAACCATTTATTGTCTT...ATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACCATACTCTTATGTACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATGCTACAGGAACATTaGGAAGTGACAGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKMLQEH*EVTAVG
Trigger: CCCTACAGCTGTCACTTCCAAATGTTCCTGTAGCAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGTGCTGCAGCCTTATaGATCTTAATTGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGAAAL*ILIASL
Trigger: CAGGCTTGCAATTAAGATCAATAAGGCTGCAGCACC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGGTGCTGCAGCCTTATaGATCTTAATTGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMGAAAL*ILIASL
Trigger: CAGGCTTGCAATTAAGATCAATAAGGCTGCAGCACC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAGGGTTCAAGCCTGAATTACCAGCAAAACTCTAGCACCAACATATGTTACAAAACTAAGAGAGTTACTTaGCACAAGGGAGACATTGTG +
Preference number: 5 (lower is better)
Translates to: KGSSLNYQQNSSTNICYKTKRVT*HKGDIV
Trigger: CACAATGTCTCCCTTGTGCAAAGTAACTCTCTTAGT...TTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCAGGCTTGAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543283.2
CDS-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGTTACACCTGGGCCATTaGGTAAAGCCAACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMLHLGH*VKPTSF
Trigger: GAAAGAAGTTGGCTTTACCAAATGGCCCAGGTGTAA...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGGCAGATATGCTGAGTaGCAAGCTGAAGTTCTAATA +
Preference number: 5 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYGRYAE*QAEVLI
Trigger: TATTAGAACTTCAGCTTGCAACTCAGCATATCTGCC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTCCTCTTTACATTTTaGGTGGCAGATATGCTGAGT +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKFLFTF*VADMLS
Trigger: ACTCAGCATATCTGCCACCAAAAATGTAAAGAGGAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATTCATCTGATAGGTAAGGGAATAATGGGTCAAAATGGTAGCAAACACTTCACCATAGTTGCTTTCTaGGTGCAAGACGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QIHLIGKGIMGQNGSKHFTIVAF*VQDVCK
Trigger: TTTACACACGTCTTGCACCAAGAAAGCAACTATGGT...GAAGTGTTTGCTACCATTTTGACCCATTATTCCCTTACCTATCAGATGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAATTCAGTCTGGGGAATTaGGGAAATGAATCAACAGTA +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKFSLGN*GNESTV
Trigger: TACTGTTGATTCATTTCCCAAATTCCCCAGACTGAA...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATTTCAGTCTGGGGAATTaGGGAAATGAATCAACAGTA +
Preference number: 5 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYFSLGN*GNESTV
Trigger: TACTGTTGATTCATTTCCCAAATTCCCCAGACTGAA...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CAAATGAATACATCTTTAGGTACAGGTTTCAAGGTGTATCTCAAGCGCTCCAAAGGAATCTCTAGAAATTaGAGTGACTTTTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: QMNTSLGTGFKVYLKRSKGISRN*SDFLAI
Trigger: TATGGCCAAAAAGTCACTCAAATTTCTAGAGATTCC...TTTGGAGCGCTTGAGATACACCTTGAAACCTGTACCTAAAGATGTATTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGTACAAGATTTGTCTaGCTCACCTCTTACCAAATC +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGTRFV*LTSYQI
Trigger: GATTTGGTAAGAGGTGAGCAAGACAAATCTTGTACC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGAGTATGGTACAAGATTaGTCTTGCTCACCTCTTACC +
Preference number: 5 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMSMVQD*SCSPLT
Trigger: GGTAAGAGGTGAGCAAGACAAATCTTGTACCATACT...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp TCGTGTTTACCTGAGATAATTATGCTCAAATGGCATGTACTTCAACCAGGATATGGAATCTCTAGAAATTaGAGTGACTTTTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: SCLPEIIMLKWHVLQPGYGISRN*SDFLAI
Trigger: TATGGCCAAAAAGTCACTCAAATTTCTAGAGATTCC...ATATCCTGGTTGAAGTACATGCCATTTGAGCATAATTATCTCAGGTAAACACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGATTTTGTTCCATACTTaGGCAACTTGGAACCCAAAA +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKILFHT*ATWNPK
Trigger: TTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAAT...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224756.12
ENST00000372088.8
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGTACCCCATCAAAGTTTaGTGCAAATGTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKYPIKV*CKCFKF
Trigger: GAACTTGAAACATTTGCACAAAACTTTGATGGGGTA...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp AAAGATACTAATTCATTTAAAGCAGCTGCAGGTGAACAACCTAAAGATGACATGGGATTTGGCACAGAGTaGATTTACATTAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: KDTNSFKAAAGEQPKDDMGFGTE*IYINRS
Trigger: GCTTCTATTAATGTAAATCAACTCTGTGCCAAATCC...CATGTCATCTTTAGGTTGTTCACCTGCAGCTGCTTTAAATGAATTAGTATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS-3UTR CAA 90 bp CTTAGAGACCTTACATTCTCGGGTATTATTTTGTTAAGTAAACGCTTTACCAAGGGATTTGGCACAGAGTaGATTTACATTAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: LRDLTFSGIILLSKRFTKGFGTE*IYINRS
Trigger: GCTTCTATTAATGTAAATCAACTCTGTGCCAAATCC...CTTGGTAAAGCGTTTACTTAACAAAATAATACCCGAGAATGTAAGGTCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000543283.2
CDS TCA 72 bp GCCCGAGCCGCAGCAACCAGCATCGCGTCCGCGGCCTaGGGGAGCGCCGGACTCCAAAGCCGCCGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: ARAAATSIASAA*GSAGLQSRRAP
Trigger: GGGGGCGCGGCGGCTTTGGAGTCCGGCGCTCCCTCAGGCCGCGGACGCGATGCTGGTTGCTGCGGCTCGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359979.8
ENST00000372088.8
CDS CCA 72 bp TGTCTGCGGTGCGGTGGAACAGTCCGTGGGATCCCCTaGAAGGAGCCCTGCCAAGGAGAGAAGGAGGGAGCA +
Preference number: 6 (lower is better)
Translates to: CLRCGGTVRGIP*KEPCQGEKEGA
Trigger: TGCTCCCTCCTTCTCTCCTTGGCAGGGCTCCTTCCAGGGGATCCCACGGACTGTTCCACCGCACCGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224756.12
ENST00000498300.5
ENST00000543283.2
CDS CCA 72 bp CTCAACTCTCTGTCTGCGGTGCGGTGGAACAGTCCGTaGGATCCCCTGGAAGGAGCCCTGCCAAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LNSLSAVRWNSP*DPLEGALPRRE
Trigger: TTCTCTCCTTGGCAGGGCTCCTTCCAGGGGATCCCACGGACTGTTCCACCGCACCGCAGACAGAGAGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498300.5
CDS TCA 72 bp CACTTTTTCCATGGTGATGATAGTGGTCAGGGTGGCTaGGGTGGTAATGCTCCTGTCCACTCCACCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HFFHGDDSGQGG*GGNAPVHSTSG
Trigger: CCCAGAGGTGGAGTGGACAGGAGCATTACCACCTCAGCCACCCTGACCACTATCATCACCATGGAAAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224756.12
ENST00000372088.8
ENST00000493409.5
ENST00000494144.5
ENST00000494586.5
ENST00000543283.2
CDS CAA 72 bp ACCACTTCCATCATGCCAGGTGATTCTTCCATGAGTTaGCAAAAACTGAGATCTTCCTGTGAGTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: TTSIMPGDSSMS*QKLRSSCEFQS
Trigger: GCTCTGGAACTCACAGGAAGATCTCAGTTTTTGCAAACTCATGGAAGAATCACCTGGCATGATGGAAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466105.5
ENST00000480006.1