RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCSAP (Homo sapiens)

Ensembl gene IDs: ENSG00000154429

Ensembl transcript IDs: ENST00000284617.7, ENST00000366686.1, ENST00000366687.5, ENST00000483092.1

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTGTGATTATGTGCCCAGCCTTTGTTCCTCCAGAATTTTAAAGTaGATGCAGTGCTCAAAACAAACTTACGATAGCACAGGGAAACCT +
Preference number: 1 (lower is better)
Translates to: LCDYVPSLCSSRILK*MQCSKQTYDSTGKP
Trigger: AGGTTTCCCTGTGCTATCGTAAGTTTGTTTTGAGCACTGCATTCACTTTAAAATTCTGGAGGAACAAAGGCTGGGCACATAATCACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR GCA 90 bp TTAAAGGAACAGTTTTCACAATCAGCTAGCTACACCATCACAAATTaGCACATTAAGGTGATCTTTAGGTACCTGTGTCGTTTAAAGACT +
Preference number: 1 (lower is better)
Translates to: LKEQFSQSASYTITN*HIKVIFRYLCRLKT
Trigger: AGTCTTTAAACGACACAGGTACCTAAAGATCACCTTAATGTGGCAATTTGTGATGGTGTAGCTAGCTGATTGTGAAAACTGTTCCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCTTCGGGTGCCAAGCTaGCATAGGCAGAGCACCATT +
Preference number: 2 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPELRVPS*HRQSTI
Trigger: AATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTCACACATCTTCGGGTaGCAAGCTGGCATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPESHIFG*QAGIGR
Trigger: TCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCGGCAGTCCGTCAGTGTaGGGCCTGCACCACTCTCTA +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPGSPSV*GLHHSL
Trigger: TAGAGAGTGGTGCAGGCCCCACACTGACGGACTGCC...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTGGCAGTCCGTCAGTGTaGGGCCTGCACCACTCTCTA +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVGSPSV*GLHHSL
Trigger: TAGAGAGTGGTGCAGGCCCCACACTGACGGACTGCC...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGGCAGTCCGTCAGTGTaGGGCCTGCACCACTCTCTA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRGSPSV*GLHHSL
Trigger: TAGAGAGTGGTGCAGGCCCCACACTGACGGACTGCC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCCAAAAGGTCAAGTGTaGCAAGGGACTGAATCCACA +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPPKGQV*QGTEST
Trigger: TGTGGATTCAGTCCCTTGTCACACTTGACCTTTTGG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVMASTV*PTAEVG
Trigger: ACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGACATATTGTGTTGTGTaGACTTCGTCTATTGGAATG +
Preference number: 2 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPETYCVV*TSSIGM
Trigger: CATTCCAATAGACGAAGTGCACACAACACAATATGT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATCACACATCTTCGGGTaGCAAGCTGGCATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRSHIFG*QAGIGR
Trigger: TCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGAGGCCTGGAACCAATaGCCCATGGATACTGAGAGG +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPEAWNQ*PMDTER
Trigger: CCTCTCAGTATCCATGGGGCATTGGTTCCAGGCCTC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGTGCACTTCGTCTATTaGAATGTACTTGAGCTATTA +
Preference number: 2 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEVHFVY*NVLELL
Trigger: TAATAGCTCAAGTACATTCCAATAGACGAAGTGCAC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACGGCAAAAGTCCACAGTaGGTGTATGCCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHGKSPQ*VYAKRS
Trigger: TGACCTTTTGGCATACACCCACTGTGGACTTTTGCC...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPMASTV*PTAEVG
Trigger: ACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCAT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTCACACATCTTCGGGTaGCAAGCTGGCATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPSHIFG*QAGIGR
Trigger: TCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCAACACAAGCCTGAGCTaGATGACTAACACCGAACAT +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPNTSLS*MTNTEH
Trigger: ATGTTCGGTGTTAGTCATCCAGCTCAGGCTTGTGTT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR CAA 90 bp GTGTCTAGGATATATGCAAATACTACACCATTTTATAGAAGGGGTTaGAGTATCCATGGAGTTTGGCATCCTAAGGGAGGCCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: VSRIYANTTPFYRRG*SIHGVWHPKGGLEP
Trigger: TGGTTCCAGGCCTCCCTTAGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATTTGCATATATCCTAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACAGTGTGACAAGGGACTaGATCCACAGTATGTATTCT +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSVTRD*IHSMYS
Trigger: AGAATACATACTGTGGATTCAGTCCCTTGTCACACT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCCAAAAGGTCAAGTGTaGCAAGGGACTGAATCCACA +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVPKGQV*QGTEST
Trigger: TGTGGATTCAGTCCCTTGTCACACTTGACCTTTTGG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCATTGCCACATTAAGGTaGTCTTTAGGTACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPIATLR*SLGTCV
Trigger: GACACAGGTACCTAAAGATCACCTTAATGTGGCAAT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATCCACAGTGGGTGTATaGCAAAAGGTCAAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRSTVGV*QKVKCD
Trigger: GTCACACTTGACCTTTTGGCATACACCCACTGTGGA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGGCAAAAGTCCACAGTaGGTGTATGCCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRGKSPQ*VYAKRS
Trigger: TGACCTTTTGGCATACACCCACTGTGGACTTTTGCC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCTACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACCCTTGCATAATCAGTTaGTTTCTTAAACCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHPCIIS*FLKPVS
Trigger: GGACACAGGTTTAAGAAACCAACTGATTATGCAAGG...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACATAACCAAATGTCTATaGCTTCAACTGTCTGCCCTA +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHITKCL*LQLSAL
Trigger: TAGGGCAGACAGTTGAAGCCATAGACATTTGGTTAT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGGCAAAAGTCCACAGTaGGTGTATGCCAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPGKSPQ*VYAKRS
Trigger: TGACCTTTTGGCATACACCCACTGTGGACTTTTGCC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAAACACAAGCCTGAGCTaGATGACTAACACCGAACAT +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRNTSLS*MTNTEH
Trigger: ATGTTCGGTGTTAGTCATCCAGCTCAGGCTTGTGTT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCATCTTCTGGAAGTTATaGCTTCCAATAACAGCCATC +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPIFWKL*LPITAI
Trigger: GATGGCTGTTATTGGAAGCCATAACTTCCAGAAGAT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATTGCCACATTAAGGTaGTCTTTAGGTACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVIATLR*SLGTCV
Trigger: GACACAGGTACCTAAAGATCACCTTAATGTGGCAAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATCAGCTGAGTTCAAGTaGCCCAAGTATAAATACCCT +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRSAEFK*PKYKYP
Trigger: AGGGTATTTATACTTGGGTCACTTGAACTCAGCTGA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATTTATAGAAGGGGTTTaGGTATCCATGGAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRFIEGV*VSMEFG
Trigger: GCCAAACTCCATGGATACTCAAACCCCTTCTATAAA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR GCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACATTTACATAAATTTGTaGCTACCCACACACCACCAT +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHIYINL*LPTHHH
Trigger: ATGGTGGTGTGTGGGTAGGCACAAATTTATGTAAAT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCATTTACATAAATTTGTaGCTACCCACACACCACCAT +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPIYINL*LPTHHH
Trigger: ATGGTGGTGTGTGGGTAGGCACAAATTTATGTAAAT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCTAGCAAGGCTGTTTTaGACAACATGTAAAATTTCC +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPLARLF*TTCKIS
Trigger: GGAAATTTTACATGTTGTCCAAAACAGCCTTGCTAG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR CAA 90 bp CCCAAAGCAAACATACTAAAGAGAAGGAGCACTATTTACATAAATTaGTGCCTACCCACACACCACCATTCTCTCCCATTAAAGTGTAGA +
Preference number: 2 (lower is better)
Translates to: PKANILKRRSTIYIN*CLPTHHHSLPLKCR
Trigger: TCTACACTTTAATGGGAGAGAATGGTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGTGCTCCTTCTCTTTAGTATGTTTGCTTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTATTGCCACATTAAGGTaGTCTTTAGGTACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPIATLR*SLGTCV
Trigger: GACACAGGTACCTAAAGATCACCTTAATGTGGCAAT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTCAGCTGAGTTCAAGTaGCCCAAGTATAAATACCCT +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPSAEFK*PKYKYP
Trigger: AGGGTATTTATACTTGGGTCACTTGAACTCAGCTGA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATACAATTTAGTCAGCTaGGTTCAAGTGACCCAAGTA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRYNLVS*VQVTQV
Trigger: TACTTGGGTCACTTGAACTCAGCTGACTAAATTGTA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGCAAACGTTGTGCAATaGCCAGGTCATATTTTTAAG +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRANVVQ*PGHIFK
Trigger: CTTAAAAATATGACCTGGTCATTGCACAACGTTTGC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCAATGGTATAAATATGTaGCTCCTACCTAATACGCAA +
Preference number: 2 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPNGINM*LLPNTQ
Trigger: TTGCGTATTAGGTAGGAGGCACATATTTATACCATT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACCTTGCATAATCAGTTaGTTTCTTAAACCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRPCIIS*FLKPVS
Trigger: GGACACAGGTTTAAGAAACCAACTGATTATGCAAGG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAATAACCAAATGTCTATaGCTTCAACTGTCTGCCCTA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRITKCL*LQLSAL
Trigger: TAGGGCAGACAGTTGAAGCCATAGACATTTGGTTAT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTCTTATGCTGTAGGATaGAATGATCTTATAGCTATG +
Preference number: 2 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSYAVG*NDLIAM
Trigger: CATAGCTATAAGATCATTCCATCCTACAGCATAAGA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCAAGTTGCTAGCAATTaGTCTTCGATGAAACACAAT +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVQVASN*SSMKHN
Trigger: ATTGTGTTTCATCGAAGATCAATTGCTAGCAACTTG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTACAGCATTATCAACCTaGAAAAGGATAGTGGAAGAC +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPTALST*KRIVED
Trigger: GTCTTCCACTATCCTTTTTCAGGTTGATAATGCTGT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAAACAGCCATCTTGCTTaGTCTCGTTCTTACAATTTA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRNSHLA*SRSYNL
Trigger: TAAATTGTAAGAACGAGAGCAAGCAAGATGGCTGTT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCCTTGCATAATCAGTTaGTTTCTTAAACCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPPCIIS*FLKPVS
Trigger: GGACACAGGTTTAAGAAACCAACTGATTATGCAAGG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGTGCACTTCGTCTATTaGAATGTACTTGAGCTATTA +
Preference number: 2 (lower is better)
Translates to: IRREIQKEASTAFIQVSRVHFVY*NVLELL
Trigger: TAATAGCTCAAGTACATTCCAATAGACGAAGTGCAC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCAAGTTGCTAGCAATTaGTCTTCGATGAAACACAAT +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPQVASN*SSMKHN
Trigger: ATTGTGTTTCATCGAAGATCAATTGCTAGCAACTTG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTTACACCATCACAAATTaGCACATTAAGGTGATCTTT +
Preference number: 2 (lower is better)
Translates to: IIFWKLWLPITAILLALVYTITN*HIKVIF
Trigger: AAAGATCACCTTAATGTGGCAATTTGTGATGGTGTA...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 2 (lower is better)
Translates to: TIISYKELSTYPSSRFLSYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTTGCTGTAGGATGGAATaGTCTTATAGCTATGGAATC +
Preference number: 2 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSICCRME*SYSYGI
Trigger: GATTCCATAGCTATAAGATCATTCCATCCTACAGCA...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTGCTGTAGGATGGAATaGTCTTATAGCTATGGAATC +
Preference number: 2 (lower is better)
Translates to: TIISYKELSTYPSSRFLSCCRME*SYSYGI
Trigger: GATTCCATAGCTATAAGATCATTCCATCCTACAGCA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAATGGTATAAATATGTaGCTCCTACCTAATACGCAA +
Preference number: 2 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPNGINM*LLPNTQ
Trigger: TTGCGTATTAGGTAGGAGGCACATATTTATACCATT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTACATATTGTGTTGTGTaGACTTCGTCTATTGGAATG +
Preference number: 2 (lower is better)
Translates to: TIISYKELSTYPSSRFLSTYCVV*TSSIGM
Trigger: CATTCCAATAGACGAAGTGCACACAACACAATATGT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGTGCACTTCGTCTATTaGAATGTACTTGAGCTATTA +
Preference number: 2 (lower is better)
Translates to: TIISYKELSTYPSSRFLSVHFVY*NVLELL
Trigger: TAATAGCTCAAGTACATTCCAATAGACGAAGTGCAC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTCTTATGCTGTAGGATaGAATGATCTTATAGCTATG +
Preference number: 2 (lower is better)
Translates to: TIISYKELSTYPSSRFLSSYAVG*NDLIAM
Trigger: CATAGCTATAAGATCATTCCATCCTACAGCATAAGA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
34% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTTCTTATGCTGTAGGATaGAATGATCTTATAGCTATG +
Preference number: 2 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSISYAVG*NDLIAM
Trigger: CATAGCTATAAGATCATTCCATCCTACAGCATAAGA...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR GCA 72 bp AATACTCAGCCTCACGTCCACTCACACATCTTCGGGTaGCAAGCTGGCATAGGCAGAGCACCATTATCTCTT +
Preference number: 3 (lower is better)
Translates to: NTQPHVHSHIFG*QAGIGRAPLSL
Trigger: AAGAGATAATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGAGTGGACGTGAGGCTGAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR CCA 72 bp GCCTCACGTCCACTCACACATCTTCGGGTGCCAAGCTaGCATAGGCAGAGCACCATTATCTCTTATAAGGAA +
Preference number: 3 (lower is better)
Translates to: ASRPLTHLRVPS*HRQSTIISYKE
Trigger: TTCCTTATAAGAGATAATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGAGTGGACGTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCCTTCTAGCAGATTCTaGTCTCCACAGGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEPSSRF*SPQDGE
Trigger: TTCTCCATCCTGTGGAGACAAGAATCTGCTAGAAGG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTACTGTACACACATATaGTGTTGTGTGCACTTCGTC +
Preference number: 3 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEYCTHI*CCVHFV
Trigger: GACGAAGTGCACACAACACAATATGTGTGTACAGTA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR GCA 72 bp CCATTACAGAAGAGGCAAAAGTCCACAGTGGGTGTATaGCAAAAGGTCAAGTGTGACAAGGGACTGAATCCA +
Preference number: 3 (lower is better)
Translates to: PLQKRQKSTVGV*QKVKCDKGLNP
Trigger: TGGATTCAGTCCCTTGTCACACTTGACCTTTTGGCATACACCCACTGTGGACTTTTGCCTCTTCTGTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGCCGTCTTTCCTAGATaGTCAGCTGCAACACAAGCC +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPAVFPR*SAATQA
Trigger: GGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR TCA 72 bp AATACAACCCCGAATTATTGTGTGGCCTGGGCTTTGTaGTTATGTGCCCAGCCTTTGTTCCTCCAGAATTTT +
Preference number: 3 (lower is better)
Translates to: NTTPNYCVAWAL*LCAQPLFLQNF
Trigger: AAAATTCTGGAGGAACAAAGGCTGGGCACATAATCACAAAGCCCAGGCCACACAATAATTCGGGGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACTCACACTAGTAGGCTaGAAGGAGGCAAATTTGGAC +
Preference number: 3 (lower is better)
Translates to: IRREIQKEASTAFIQVSRLTLVG*KEANLD
Trigger: GTCCAAATTTGCCTCCTTCAAGCCTACTAGTGTGAG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 3 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHNCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCCTTCTAGCAGATTCTaGTCTCCACAGGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPPSSRF*SPQDGE
Trigger: TTCTCCATCCTGTGGAGACAAGAATCTGCTAGAAGG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTTCACTGTCTTGCAGGTaGTCCCAAGAATTAGGAACA +
Preference number: 3 (lower is better)
Translates to: IIFWKLWLPITAILLALVSLSCR*SQELGT
Trigger: TGTTCCTAATTCTTGGGACAACCTGCAAGACAGTGA...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACCAATAACAGCCATCTaGCTTGCTCTCGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: IRREIQKEASTAFIQVSRPITAI*LALVLT
Trigger: TGTAAGAACGAGAGCAAGCAAGATGGCTGTTATTGG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR TCA 72 bp TATATGCAAATACTACACCATTTTATAGAAGGGGTTTaGGTATCCATGGAGTTTGGCATCCTAAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: YMQILHHFIEGV*VSMEFGILREA
Trigger: GGCCTCCCTTAGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATTTGCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR GCA 72 bp TTCATAAATAACCAAATGTCTATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGTGACCAATATTCATCA +
Preference number: 3 (lower is better)
Translates to: FINNQMSMASTV*PTAEVGDQYSS
Trigger: TGATGAATATTGGTCACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCATAGACATTTGGTTATTTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATACTGTACACACATATaGTGTTGTGTGCACTTCGTC +
Preference number: 3 (lower is better)
Translates to: IRREIQKEASTAFIQVSRYCTHI*CCVHFV
Trigger: GACGAAGTGCACACAACACAATATGTGTGTACAGTA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACGAAGACATCATTCATTaGATGGAAACCAGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHEDIIH*METSVC
Trigger: ACAAACACTGGTTTCCATCAAATGAATGATGTCTTC...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCGAAGACATCATTCATTaGATGGAAACCAGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPEDIIH*METSVC
Trigger: ACAAACACTGGTTTCCATCAAATGAATGATGTCTTC...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTCACTGTCTTGCAGGTaGTCCCAAGAATTAGGAACA +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPSLSCR*SQELGT
Trigger: TGTTCCTAATTCTTGGGACAACCTGCAAGACAGTGA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAACTGTCTCACTGTCTaGCAGGTTGTCCCAAGAATT +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPNCLTV*QVVPRI
Trigger: AATTCTTGGGACAACCTGCAAGACAGTGAGACAGTT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCCAATAACAGCCATCTaGCTTGCTCTCGTTCTTACA +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPPITAI*LALVLT
Trigger: TGTAAGAACGAGAGCAAGCAAGATGGCTGTTATTGG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTACTATTTACATAAATTaGTGCCTACCCACACACCAC +
Preference number: 3 (lower is better)
Translates to: IIFWKLWLPITAILLALVTIYIN*CLPTHH
Trigger: GTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR GCA 72 bp AGGCAAATTTGGACCAAAAATCTAGACATAGCTCCTTaGATAGGGTTTGATATTAAGCACACACTTGCACTG +
Preference number: 3 (lower is better)
Translates to: RQIWTKNLDIAP*IGFDIKHTLAL
Trigger: CAGTGCAAGTGTGTGCTTAATATCAAACCCTATGCAAGGAGCTATGTCTAGATTTTTGGTCCAAATTTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
3UTR CCA 72 bp ACTTACGAATTGTGCAGAATTATCTTCTGGAAGTTATaGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTT +
Preference number: 3 (lower is better)
Translates to: TYELCRIIFWKL*LPITAILLALV
Trigger: AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAATTCTGCACAATTCGTAAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTACTATTTACATAAATTaGTGCCTACCCACACACCAC +
Preference number: 3 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPTIYIN*CLPTHH
Trigger: GTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 3 (lower is better)
Translates to: TIISYKELSTYPSSRFLSNCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 3 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSINCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTACTATTTACATAAATTaGTGCCTACCCACACACCAC +
Preference number: 3 (lower is better)
Translates to: TIISYKELSTYPSSRFLSTIYIN*CLPTHH
Trigger: GTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGGCGCCCGACGACTCTaGCGACGCCGAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEGARRL*RRRVLR
Trigger: TCGGAGGACTCGGCGTCGTCAGAGTCGTCGGGCGCC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCTCCCCGGGGACATGGTaGCGTCCGCCGCCTCGAGCG +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPSPGTW*RPPPRA
Trigger: CGCTCGAGGCGGCGGACGGCACCATGTCCCCGGGGA...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCGCTCCCCGGGGACATaGTGCCGTCCGCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPRSPGT*CRPPPR
Trigger: TCGAGGCGGCGGACGGCACCATGTCCCCGGGGAGCG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACCGTTCCGCCTCCTCCTaGGTCGCCGGCTCTACGGGC +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHRSASS*VAGSTG
Trigger: GCCCGTAGAGCCGGCGACCCAGGAGGAGGCGGAACG...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGGCAGTCCGTCAGTGTaGGGCCTGCACCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEGSPSV*GLHHSL
Trigger: TAGAGAGTGGTGCAGGCCCCACACTGACGGACTGCC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCAGAGCCAGGGCGCGTaGGCCTGCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPQSQGA*ACSSSR
Trigger: CCGGCTGCTGGAGCAGGCGCACGCGCCCTGGCTCTG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGAGGCCTGGAACCAATaGCCCATGGATACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEEAWNQ*PMDTER
Trigger: CCTCTCAGTATCCATGGGGCATTGGTTCCAGGCCTC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGGCGCCCGACGACTCTaGCGACGCCGAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPGARRL*RRRVLR
Trigger: TCGGAGGACTCGGCGTCGTCAGAGTCGTCGGGCGCC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEMASTV*PTAEVG
Trigger: ACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCAT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTTTCACTGGCAGTGCTaGGCTGGTAAATACAGGCAC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEFHWQC*AGKYRH
Trigger: GTGCCTGTATTTACCAGCTCAGCACTGCCAGTGAAA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366686.1
CDS-3UTR GCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTCAGAGCCAGGGCGCGTaGGCCTGCTCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIQSQGA*ACSSSR
Trigger: CCGGCTGCTGGAGCAGGCGCACGCGCCCTGGCTCTG...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTCGCTCCCCGGGGACATaGTGCCGTCCGCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIRSPGT*CRPPPR
Trigger: TCGAGGCGGCGGACGGCACCATGTCCCCGGGGAGCG...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGAGGCTCAGTACTGGTaGGTGATTTGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEEAQYW*VICQSL
Trigger: GAGAGACTGACAAATCACCCACCAGTACTGAGCCTC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCCCACAGGAATAATCTaGAAGGCATGTTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEPTGII*KACSLP
Trigger: GGGTAGGGAACATGCCTTCCAGATTATTCCTGTGGG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366686.1
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCTCAGTACTGGTGGGTaGTTTGTCAGTCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPELSTGG*FVSLSC
Trigger: ACAAGAGAGACTGACAAATCACCCACCAGTACTGAG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGATCTTTGGGGACTTTTaGCCGCTTTCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEIFGDF*PLSCFL
Trigger: GAGGAAACAGGAAAGCGGTCAAAAGTCCCCAAAGAT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTCGTTCCGCCTCCTCCTaGGTCGCCGGCTCTACGGGC +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIRSASS*VAGSTG
Trigger: GCCCGTAGAGCCGGCGACCCAGGAGGAGGCGGAACG...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCGCGCGCTTTCCTCCTaGGCAAGATGTCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSRALSS*ARCRRG
Trigger: GCCGCGGCGACATCTTGCTCAGGAGGAAAGCGCGCG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284617.7
CDS-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCGAGGCCTGGAACCAATaGCCCATGGATACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPEAWNQ*PMDTER
Trigger: CCTCTCAGTATCCATGGGGCATTGGTTCCAGGCCTC...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGAAAAGAGGCCTCTACTaGCTTCATTCAAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEKRGLY*LHSSVE
Trigger: CTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCTTCGGGTGCCAAGCTaGCATAGGCAGAGCACCATT +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPLRVPS*HRQSTI
Trigger: AATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCGACGCACAGACGTTGTaGGTCTTCTGGCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPDAQTL*VFWLPV
Trigger: TACAGGAAGCCAGAAGACTCACAACGTCTGTGCGTC...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCATCCACGGGTTCTCTaGGGAGGAAGCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPHPRVL*GGSLHL
Trigger: AAGATGAAGGCTTCCTCCTCAGAGAACCCGTGGATG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACCATCCACGGGTTCTCTaGGGAGGAAGCCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHHPRVL*GGSLHL
Trigger: AAGATGAAGGCTTCCTCCTCAGAGAACCCGTGGATG...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGAGTGTGACAAGGGACTaGATCCACAGTATGTATTCT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPESVTRD*IHSMYS
Trigger: AGAATACATACTGTGGATTCAGTCCCTTGTCACACT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGATTGCCACATTAAGGTaGTCTTTAGGTACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEIATLR*SLGTCV
Trigger: GACACAGGTACCTAAAGATCACCTTAATGTGGCAAT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTCAGCTGAGTTCAAGTaGCCCAAGTATAAATACCCT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPESAEFK*PKYKYP
Trigger: AGGGTATTTATACTTGGGTCACTTGAACTCAGCTGA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTTTATAGAAGGGGTTTaGGTATCCATGGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEFIEGV*VSMEFG
Trigger: GCCAAACTCCATGGATACTCAAACCCCTTCTATAAA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTGTGGCCTGGGCTTTGTaGTTATGTGCCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVVAWAL*LCAQPL
Trigger: CAAAGGCTGGGCACATAATCACAAAGCCCAGGCCAC...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGGTTTCTTTAAGCTCTTaGCGAATAGCACCTCATGTA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEVSLSS*RIAPHV
Trigger: TACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAAC...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCGAGGCTCAGTACTGGTaGGTGATTTGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPEAQYW*VICQSL
Trigger: GAGAGACTGACAAATCACCCACCAGTACTGAGCCTC...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCCTTGCATAATCAGTTaGTTTCTTAAACCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEPCIIS*FLKPVS
Trigger: GGACACAGGTTTAAGAAACCAACTGATTATGCAAGG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCTTCGGGTGCCAAGCTaGCATAGGCAGAGCACCATT +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVLRVPS*HRQSTI
Trigger: AATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACTTCGGGTGCCAAGCTaGCATAGGCAGAGCACCATT +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRLRVPS*HRQSTI
Trigger: AATGGTGCTCTGCCTATGCCAGCTTGGCACCCGAAG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGATCTTCTGGAAGTTATaGCTTCCAATAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEIFWKL*LPITAI
Trigger: GATGGCTGTTATTGGAAGCCATAACTTCCAGAAGAT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACAGTATCCATGGAGTTTaGCATCCTAAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSIHGV*HPKGGL
Trigger: CAGGCCTCCCTTAGGATGCCAAACTCCATGGATACT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRMASTV*PTAEVG
Trigger: ACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCAT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCTCCACAGTGGGTGTATaGCAAAAGGTCAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPSTVGV*QKVKCD
Trigger: GTCACACTTGACCTTTTGGCATACACCCACTGTGGA...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTCCACAGTGGGTGTATaGCAAAAGGTCAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSTVGV*QKVKCD
Trigger: GTCACACTTGACCTTTTGGCATACACCCACTGTGGA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCATTTACAAAGTGTGTaGCCAGAACAGCATTATCAA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEHLQSV*PEQHYQ
Trigger: TTGATAATGCTGTTCTGGGCACACACTTTGTAAATG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCAGTCTCTCTTGTTCTaGTTTGTTGTTCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEQSLLF*FVVQVY
Trigger: ATAAACCTGAACAACAAACCAGAACAAGAGAGACTG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCTAGCAAGGCTGTTTTaGACAACATGTAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPELARLF*TTCKIS
Trigger: GGAAATTTTACATGTTGTCCAAAACAGCCTTGCTAG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGGCAGTCCGTCAGTGTaGGGCCTGCACCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIGSPSV*GLHHSL
Trigger: TAGAGAGTGGTGCAGGCCCCACACTGACGGACTGCC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGACGCACAGACGTTGTaGGTCTTCTGGCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPDAQTL*VFWLPV
Trigger: TACAGGAAGCCAGAAGACTCACAACGTCTGTGCGTC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTACACCATCACAAATTaGCACATTAAGGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEYTITN*HIKVIF
Trigger: AAAGATCACCTTAATGTGGCAATTTGTGATGGTGTA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGAATGGTATAAATATGTaGCTCCTACCTAATACGCAA +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPENGINM*LLPNTQ
Trigger: TTGCGTATTAGGTAGGAGGCACATATTTATACCATT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGTCGAGGCTCAGTACTaGTGGGTGATTTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRVEAQY*WVICQS
Trigger: AGACTGACAAATCACCCACCAGTACTGAGCCTCGAC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTGTCGAGGCTCAGTACTaGTGGGTGATTTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVVEAQY*WVICQS
Trigger: AGACTGACAAATCACCCACCAGTACTGAGCCTCGAC...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTCTTATGCTGTAGGATaGAATGATCTTATAGCTATG +
Preference number: 4 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPESYAVG*NDLIAM
Trigger: CATAGCTATAAGATCATTCCATCCTACAGCATAAGA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAAGTATCCATGGAGTTTaGCATCCTAAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRSIHGV*HPKGGL
Trigger: CAGGCCTCCCTTAGGATGCCAAACTCCATGGATACT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATCTTTGGGGACTTTTaGCCGCTTTCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVIFGDF*PLSCFL
Trigger: GAGGAAACAGGAAAGCGGTCAAAAGTCCCCAAAGAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACATTGCCACATTAAGGTaGTCTTTAGGTACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHIATLR*SLGTCV
Trigger: GACACAGGTACCTAAAGATCACCTTAATGTGGCAAT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTCAGCTGAGTTCAAGTaGCCCAAGTATAAATACCCT +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSAEFK*PKYKYP
Trigger: AGGGTATTTATACTTGGGTCACTTGAACTCAGCTGA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAAGCACACACTTGCACTaGATAACTCCATATCCACCC +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRSTHLH*ITPYPP
Trigger: GGGTGGATATGGAGTTATTCAGTGCAAGTGTGTGCT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGTGGCCTGGGCTTTGTaGTTATGTGCCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIVAWAL*LCAQPL
Trigger: CAAAGGCTGGGCACATAATCACAAAGCCCAGGCCAC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCCAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTGTATCCGTGAGTTCTaGATCCATGGATTCAACCAA +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHCIREF*IHGFNQ
Trigger: TTGGTTGAATCCATGGATGCAGAACTCACGGATACA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTGGCTTTGTGATTATGTaGCCAGCCTTTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVGFVIM*PAFVPP
Trigger: TGGAGGAACAAAGGCTGGGCACATAATCACAAAGCC...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTTACTCGATGATCTTTaGGGACTTTTGACCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHLLDDL*GLLTAF
Trigger: GAAAGCGGTCAAAAGTCCCCAAAGATCATCGAGTAA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
3UTR CAA 72 bp CAATACATAGTTCTTAGAAAATACAACCCCGAATTATaGTGTGGCCTGGGCTTTGTGATTATGTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QYIVLRKYNPEL*CGLGFVIMCPA
Trigger: GGCTGGGCACATAATCACAAAGCCCAGGCCACACAATAATTCGGGGTTGTATTTTCTAAGAACTATGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCTCAGTACTGGTGGGTaGTTTGTCAGTCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPLSTGG*FVSLSC
Trigger: ACAAGAGAGACTGACAAATCACCCACCAGTACTGAG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGACGCACAGACGTTGTaGGTCTTCTGGCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSDAQTL*VFWLPV
Trigger: TACAGGAAGCCAGAAGACTCACAACGTCTGTGCGTC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 4 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCTGCTGTAGGATGGAATaGTCTTATAGCTATGGAATC +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPCCRME*SYSYGI
Trigger: GATTCCATAGCTATAAGATCATTCCATCCTACAGCA...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCACAGCATTATCAACCTaGAAAAGGATAGTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPTALST*KRIVED
Trigger: GTCTTCCACTATCCTTTTTCAGGTTGATAATGCTGT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAGCACACACTTGCACTaGATAACTCCATATCCACCC +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPSTHLH*ITPYPP
Trigger: GGGTGGATATGGAGTTATTCAGTGCAAGTGTGTGCT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAATAAGGCACTTGGTTaGTGTCGAGGCTCAGTACTG +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPNKALG*CRGSVL
Trigger: CAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTATGGCTTCAACTGTCTaGCCTACTGCCGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIMASTV*PTAEVG
Trigger: ACCTACCTCGGCAGTAGGGCAGACAGTTGAAGCCAT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTCACACATCTTCGGGTaGCAAGCTGGCATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSSHIFG*QAGIGR
Trigger: TCTGCCTATGCCAGCTTGGCACCCGAAGATGTGTGA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTTCTACATCTTTCACTaGCAGTGCTGGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSFYIFH*QCWQSR
Trigger: GCGGCTCTGCCAGCACTGCCAGTGAAAGATGTAGAA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTTGTATCCGTGAGTTCTaGATCCATGGATTCAACCAA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVCIREF*IHGFNQ
Trigger: TTGGTTGAATCCATGGATGCAGAACTCACGGATACA...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAAAAGAGGCCTCTACTaGCTTCATTCAAGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPKRGLY*LHSSVE
Trigger: CTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGAGGCTCAGTACTGGTaGGTGATTTGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSEAQYW*VICQSL
Trigger: GAGAGACTGACAAATCACCCACCAGTACTGAGCCTC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTTTACTCGATGATCTTTaGGGACTTTTGACCGCTTTC +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVLLDDL*GLLTAF
Trigger: GAAAGCGGTCAAAAGTCCCCAAAGATCATCGAGTAA...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTAGTATCCATGGAGTTTaGCATCCTAAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSISIHGV*HPKGGL
Trigger: CAGGCCTCCCTTAGGATGCCAAACTCCATGGATACT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCCCCGAATTATTGTGTaGCCTGGGCTTTGTGATTAT +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPPRIIV*PGLCDY
Trigger: ATAATCACAAAGCCCAGGCCACACAATAATTCGGGG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTATCTTTGGGGACTTTTaGCCGCTTTCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSIFGDF*PLSCFL
Trigger: GAGGAAACAGGAAAGCGGTCAAAAGTCCCCAAAGAT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATACTGCCGAGGTAGGTaGCCAATATTCATCAAAATA +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRYCRGR*PIFIKI
Trigger: TATTTTGATGAATATTGGTCACCTACCTCGGCAGTA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATGCTGTAGGATGGAATaGTCTTATAGCTATGGAATC +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRCCRME*SYSYGI
Trigger: GATTCCATAGCTATAAGATCATTCCATCCTACAGCA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTTGCTGTAGGATGGAATaGTCTTATAGCTATGGAATC +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVCCRME*SYSYGI
Trigger: GATTCCATAGCTATAAGATCATTCCATCCTACAGCA...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTAGTGTGACAAGGGACTaGATCCACAGTATGTATTCT +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPSVTRD*IHSMYS
Trigger: AGAATACATACTGTGGATTCAGTCCCTTGTCACACT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCCAAAAGGTCAAGTGTaGCAAGGGACTGAATCCACA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSPKGQV*QGTEST
Trigger: TGTGGATTCAGTCCCTTGTCACACTTGACCTTTTGG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTACAGCATTATCAACCTaGAAAAGGATAGTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVTALST*KRIVED
Trigger: GTCTTCCACTATCCTTTTTCAGGTTGATAATGCTGT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTAATAAGGCACTTGGTTaGTGTCGAGGCTCAGTACTG +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSNKALG*CRGSVL
Trigger: CAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCCTGTCTTCTGTTCTTaGCTCGTAATGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPPVFCS*LVMLIH
Trigger: ATGAATCAGCATTACGAGCCAAGAACAGAAGACAGG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATAACCAAATGTCTATaGCTTCAACTGTCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVITKCL*LQLSAL
Trigger: TAGGGCAGACAGTTGAAGCCATAGACATTTGGTTAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGGCAAAAGTCCACAGTaGGTGTATGCCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIGKSPQ*VYAKRS
Trigger: TGACCTTTTGGCATACACCCACTGTGGACTTTTGCC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGGCAAAAGTCCACAGTaGGTGTATGCCAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSGKSPQ*VYAKRS
Trigger: TGACCTTTTGGCATACACCCACTGTGGACTTTTGCC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATCTTCTGGAAGTTATaGCTTCCAATAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVIFWKL*LPITAI
Trigger: GATGGCTGTTATTGGAAGCCATAACTTCCAGAAGAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACAAGTTGCTAGCAATTaGTCTTCGATGAAACACAAT +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRQVASN*SSMKHN
Trigger: ATTGTGTTTCATCGAAGATCAATTGCTAGCAACTTG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTACAATTTAGTCAGCTaGGTTCAAGTGACCCAAGTA +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPYNLVS*VQVTQV
Trigger: TACTTGGGTCACTTGAACTCAGCTGACTAAATTGTA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTGCAAACGTTGTGCAATaGCCAGGTCATATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPANVVQ*PGHIFK
Trigger: CTTAAAAATATGACCTGGTCATTGCACAACGTTTGC...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAACATATTGTGTTGTGTaGACTTCGTCTATTGGAATG +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRTYCVV*TSSIGM
Trigger: CATTCCAATAGACGAAGTGCACACAACACAATATGT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTACATATTGTGTTGTGTaGACTTCGTCTATTGGAATG +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVTYCVV*TSSIGM
Trigger: CATTCCAATAGACGAAGTGCACACAACACAATATGT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTAACAGCCATCTTGCTTaGTCTCGTTCTTACAATTTA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVNSHLA*SRSYNL
Trigger: TAAATTGTAAGAACGAGAGCAAGCAAGATGGCTGTT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCATTTACAAAGTGTGTaGCCAGAACAGCATTATCAA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVHLQSV*PEQHYQ
Trigger: TTGATAATGCTGTTCTGGGCACACACTTTGTAAATG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGACTAGACATAGCTCCTTaGATAGGGTTTGATATTAAG +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRLDIAP*IGFDIK
Trigger: CTTAATATCAAACCCTATGCAAGGAGCTATGTCTAG...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCAGTCTCTCTTGTTCTaGTTTGTTGTTCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVQSLLF*FVVQVY
Trigger: ATAAACCTGAACAACAAACCAGAACAAGAGAGACTG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTATAACCAAATGTCTATaGCTTCAACTGTCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPITKCL*LQLSAL
Trigger: TAGGGCAGACAGTTGAAGCCATAGACATTTGGTTAT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTAACACAAGCCTGAGCTaGATGACTAACACCGAACAT +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSINTSLS*MTNTEH
Trigger: ATGTTCGGTGTTAGTCATCCAGCTCAGGCTTGTGTT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTAACACAAGCCTGAGCTaGATGACTAACACCGAACAT +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSNTSLS*MTNTEH
Trigger: ATGTTCGGTGTTAGTCATCCAGCTCAGGCTTGTGTT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTCCCCGAATTATTGTGTaGCCTGGGCTTTGTGATTAT +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIPRIIV*PGLCDY
Trigger: ATAATCACAAAGCCCAGGCCACACAATAATTCGGGG...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR TCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTTTTATAGAAGGGGTTTaGGTATCCATGGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIFIEGV*VSMEFG
Trigger: GCCAAACTCCATGGATACTCAAACCCCTTCTATAAA...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCAGTGGAACAAGCAATaGCAATGTACCAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSQWNKQ*QCTKCN
Trigger: ATTGCACTTGGTACATTGGCATTGCTTGTTCCACTG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTATTTACATAAATTTGTaGCTACCCACACACCACCAT +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPIYINL*LPTHHH
Trigger: ATGGTGGTGTGTGGGTAGGCACAAATTTATGTAAAT...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATACACCATCACAAATTaGCACATTAAGGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: IRREIQKEASTAFIQVSRYTITN*HIKVIF
Trigger: AAAGATCACCTTAATGTGGCAATTTGTGATGGTGTA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTAATGGTATAAATATGTaGCTCCTACCTAATACGCAA +
Preference number: 4 (lower is better)
Translates to: IIFWKLWLPITAILLALVNGINM*LLPNTQ
Trigger: TTGCGTATTAGGTAGGAGGCACATATTTATACCATT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTGTATCCGTGAGTTCTaGATCCATGGATTCAACCAA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSCIREF*IHGFNQ
Trigger: TTGGTTGAATCCATGGATGCAGAACTCACGGATACA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCTAGACATAGCTCCTTaGATAGGGTTTGATATTAAG +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPLDIAP*IGFDIK
Trigger: CTTAATATCAAACCCTATGCAAGGAGCTATGTCTAG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTTACTCGATGATCTTTaGGGACTTTTGACCGCTTTC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSLLDDL*GLLTAF
Trigger: GAAAGCGGTCAAAAGTCCCCAAAGATCATCGAGTAA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCCTGTCTTCTGTTCTTaGCTCGTAATGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSPVFCS*LVMLIH
Trigger: ATGAATCAGCATTACGAGCCAAGAACAGAAGACAGG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTCTAGCAAGGCTGTTTTaGACAACATGTAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPLARLF*TTCKIS
Trigger: GGAAATTTTACATGTTGTCCAAAACAGCCTTGCTAG...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTTACAATTTAGTCAGCTaGGTTCAAGTGACCCAAGTA +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIYNLVS*VQVTQV
Trigger: TACTTGGGTCACTTGAACTCAGCTGACTAAATTGTA...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTACAGCATTATCAACCTaGAAAAGGATAGTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSTALST*KRIVED
Trigger: GTCTTCCACTATCCTTTTTCAGGTTGATAATGCTGT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR TCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGCAAACGTTGTGCAATaGCCAGGTCATATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSANVVQ*PGHIFK
Trigger: CTTAAAAATATGACCTGGTCATTGCACAACGTTTGC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGTTTCTTTAAGCTCTTaGCGAATAGCACCTCATGTA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSVSLSS*RIAPHV
Trigger: TACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAAC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTATCTTCTGGAAGTTATaGCTTCCAATAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSIFWKL*LPITAI
Trigger: GATGGCTGTTATTGGAAGCCATAACTTCCAGAAGAT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTACATATTGTGTTGTGTaGACTTCGTCTATTGGAATG +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSITYCVV*TSSIGM
Trigger: CATTCCAATAGACGAAGTGCACACAACACAATATGT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTAACAGCCATCTTGCTTaGTCTCGTTCTTACAATTTA +
Preference number: 4 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSINSHLA*SRSYNL
Trigger: TAAATTGTAAGAACGAGAGCAAGCAAGATGGCTGTT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTAACAGCCATCTTGCTTaGTCTCGTTCTTACAATTTA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSNSHLA*SRSYNL
Trigger: TAAATTGTAAGAACGAGAGCAAGCAAGATGGCTGTT...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR GCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCATTTACAAAGTGTGTaGCCAGAACAGCATTATCAA +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSHLQSV*PEQHYQ
Trigger: TTGATAATGCTGTTCTGGGCACACACTTTGTAAATG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CCA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCAGTCTCTCTTGTTCTaGTTTGTTGTTCAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: TIISYKELSTYPSSRFLSQSLLF*FVVQVY
Trigger: ATAAACCTGAACAACAAACCAGAACAAGAGAGACTG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS GCA 90 bp GGGACATGGTGCCGTCCGCCGCCTCGAGCGCCAGCCGCTCCTCGCTaGCCGCAGCCTCCTTCCCGCCGCGCCCGGCCGATCCTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GTWCRPPPRAPAAPR*PQPPSRRARPILCA
Trigger: GGCGCAGAGGATCGGCCGGGCGCGGCGGGAAGGAGGCTGCGGGCAGCGAGGAGCGGCTGGCGCTCGAGGCGGCGGACGGCACCATGTCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000483092.1
CDS TCA 90 bp GCGCAGCAGCTAAAGCGCAGCTCGCTCTCCCGCGCGCTTTCCTCCTaGGCAAGATGTCGCCGCGGCGGCCCGCGCTCCAGCTGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: AQQLKRSSLSRALSS*ARCRRGGPRSSCRR
Trigger: CCGCCTGCAGCTGGAGCGCGGGCCGCCGCGGCGACATCTTGCTCAGGAGGAAAGCGCGCGGGAGAGCGAGCTGCGCTTTAGCTGCTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CCA 90 bp GGTGCGGGCGTGCCTGCCAGTCCGAGGGGCCCAGGCCCAGGTCCCTaGCCCACTTATTTGAGGTGCCCGTCCACCCTGGTCCCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GAGVPASPRGPGPGP*PTYLRCPSTLVPAD
Trigger: GTCTGCTGGGACCAGGGTGGACGGGCACCTCAAATAAGTGGGCCAGGGACCTGGGCCTGGGCCCCTCGGACTGGCAGGCACGCCCGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS TCA 90 bp GAGAGCCGCTTCCTTCATTCAAAAGCCCCTCCGCACAACAGGGAGTaGTTTCCATCGTTACCGCCTAGGTGCGCAGCCAGGCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: ESRFLHSKAPPHNRE*FPSLPPRCAARHSL
Trigger: CAGGGAATGCCTGGCTGCGCACCTAGGCGGTAACGATGGAAATCACTCCCTGTTGTGCGGAGGGGCTTTTGAATGAAGGAAGCGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CCA 90 bp TCTTGTTCTGGTTTGTTGTTCAGGTTTATCTTCTACATCTTTCACTaGCAGTGCTGGCAGAGCCGCGTCCTCCGCGTCCTCGGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SCSGLLFRFIFYIFH*QCWQSRVLRVLGLR
Trigger: GCGGAGGCCGAGGACGCGGAGGACGCGGCTCTGCCAGCACTGCCAGTGAAAGATGTAGAAGATAAACCTGAACAACAAACCAGAACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS GCA 90 bp GGAAAGATCTGGATTTGTGGTCATCCTCCAGCAGCTGCAGGAGGTTaGTGTTTGAGTTACTCCACCCGAAAATGCTCCTTAGTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: GKIWICGHPPAAAGG*CLSYSTRKCSLVLP
Trigger: CGGAAGGACTAAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCTCACACTAGTAGGCTaGAAGGAGGCAAATTTGGAC +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPELTLVG*KEANLD
Trigger: GTCCAAATTTGCCTCCTTCAAGCCTACTAGTGTGAG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS GCA 90 bp TTTCCTTCACGGAAAGATCTGGATTTGTGGTCATCCTCCAGCAGCTaGAGGAGGTTGCTGTTTGAGTTACTCCACCCGAAAATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FPSRKDLDLWSSSSS*RRLLFELLHPKMLL
Trigger: AAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCCGTGAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGCCAATAACAGCCATCTaGCTTGCTCTCGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPEPITAI*LALVLT
Trigger: TGTAAGAACGAGAGCAAGCAAGATGGCTGTTATTGG...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS GCA 90 bp CTTTTGACCGCTTTCCTGTTTCCTCTAGCAAATAAGGCACTTGGTTaGTGTCGAGGCTCAGTACTGGTGGGTGATTTGTCAGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LLTAFLFPLANKALG*CRGSVLVGDLSVSL
Trigger: AAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATTTGCTAGAGGAAACAGGAAAGCGGTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTGTTTCTTTAAGCTCTaGCCGAATAGCACCTCATGT +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPECFFKL*PNSTSC
Trigger: ACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAACA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACGCCGTCTTTCCTAGATaGTCAGCTGCAACACAAGCC +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHAVFPR*SAATQA
Trigger: GGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGC...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPENCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGACTATTTACATAAATTaGTGCCTACCCACACACCAC +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPETIYIN*CLPTHH
Trigger: GTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGT...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCTACAACCCCGAATTATaGTGTGGCCTGGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPYNPEL*CGLGFV
Trigger: CACAAAGCCCAGGCCACACAATAATTCGGGGTTGTA...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTACAACCCCGAATTATaGTGTGGCCTGGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHYNPEL*CGLGFV
Trigger: CACAAAGCCCAGGCCACACAATAATTCGGGGTTGTA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS CCA 90 bp CAATCATCTCAATTTTGCTTTCCTTCACGGAAAGATCTGGATTTGTaGTCATCCTCCAGCAGCTGCAGGAGGTTGCTGTTTGAGTTACTC +
Preference number: 5 (lower is better)
Translates to: QSSQFCFPSRKDLDL*SSSSSCRRLLFELL
Trigger: GAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCCGTGAAGGAAAGCAAAATTGAGATGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS-3UTR CAA 90 bp CACCACTCTCTAAGGCCGTCTTTCCTAGATTGTCAGCTGCAACACAAGCCTGAGTCTTGTTCTGGTTTGTaGTTCAGGTTTATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: HHSLRPSFLDCQLQHKPESCSGL*FRFIFY
Trigger: GTAGAAGATAAACCTGAACAACAAACCAGAACAAGA...CTCAGGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGCCTTAGAGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGCCGTCTTTCCTAGATaGTCAGCTGCAACACAAGCC +
Preference number: 5 (lower is better)
Translates to: IRREIQKEASTAFIQVSRAVFPR*SAATQA
Trigger: GGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS CCA 90 bp GTACATCTCAATTTAGCTAGCAGATCAGTACCCACAGGAATAATCTaGAAGGCATGTTCCCTACCCCCTCCACCTTCTGTTATTTGCATT +
Preference number: 5 (lower is better)
Translates to: VHLNLASRSVPTGII*KACSLPPPPSVICI
Trigger: AATGCAAATAACAGAAGGTGGAGGGGGTAGGGAACATGCCTTCCAGATTATTCCTGTGGGTACTGATCTGCTAGCTAAATTGAGATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366686.1
CDS CCA 90 bp GATAAATCCAATCATCTCAATTTTGCTTTCCTTCACGGAAAGATCTaGATTTGTGGTCATCCTCCAGCAGCTGCAGGAGGTTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: DKSNHLNFAFLHGKI*ICGHPPAAAGGCCL
Trigger: CAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCCGTGAAGGAAAGCAAAATTGAGATGATTGGATTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCACCTGTCTTCTGTTCTaGGCTCGTAATGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPTCLLF*ARNADS
Trigger: TGAATCAGCATTACGAGCCAAGAACAGAAGACAGGT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAGTGAGCTCGCTGCCTTaGAGCAACCAGTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: IRREIQKEASTAFIQVSRVSSLP*SNQFPF
Trigger: AAAAGGAAACTGGTTGCTCAAAGGCAGCGAGCTCAC...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTCACTGTCTTGCAGGTaGTCCCAAGAATTAGGAACA +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSLSCR*SQELGT
Trigger: TGTTCCTAATTCTTGGGACAACCTGCAAGACAGTGA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCAACTGTCTCACTGTCTaGCAGGTTGTCCCAAGAATT +
Preference number: 5 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPNCLTV*QVVPRI
Trigger: AATTCTTGGGACAACCTGCAAGACAGTGAGACAGTT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACAACTGTCTCACTGTCTaGCAGGTTGTCCCAAGAATT +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHNCLTV*QVVPRI
Trigger: AATTCTTGGGACAACCTGCAAGACAGTGAGACAGTT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTACTGTACACACATATaGTGTTGTGTGCACTTCGTC +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHYCTHI*CCVHFV
Trigger: GACGAAGTGCACACAACACAATATGTGTGTACAGTA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCCTTCTAGCAGATTCTaGTCTCCACAGGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: IIFWKLWLPITAILLALVPSSRF*SPQDGE
Trigger: TTCTCCATCCTGTGGAGACAAGAATCTGCTAGAAGG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACATTTGTCAGTCTCTCTaGTTCTGGTTTGTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHICQSL*FWFVVQ
Trigger: CTGAACAACAAACCAGAACAAGAGAGACTGACAAAT...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGAACCTGTCTTCTGTTCTaGGCTCGTAATGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: IRREIQKEASTAFIQVSRTCLLF*ARNADS
Trigger: TGAATCAGCATTACGAGCCAAGAACAGAAGACAGGT...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 5 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPNCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATGGATACTGAGAGGCGACTGTACCATAACATTCCATTTACAAAGTGTGTGCCCACTATTTACATAAATTaGTGCCTACCCACACACCAC +
Preference number: 5 (lower is better)
Translates to: MDTERRLYHNIPFTKCVPTIYIN*CLPTHH
Trigger: GTGGTGTGTGGGTAGGCACAAATTTATGTAAATAGT...GGGCACACACTTTGTAAATGGAATGTTATGGTACAGTCGCCTCTCAGTATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGCCGTCTTTCCTAGATaGTCAGCTGCAACACAAGCC +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIAVFPR*SAATQA
Trigger: GGCTTGTGTTGCAGCTGACAATCTAGGAAAGACGGC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTTATGTGCCCAGCCTTaGTTCCTCCAGAATTTTAAA +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHLCAQP*FLQNFK
Trigger: TTTAAAATTCTGGAGGAACAAAGGCTGGGCACATAA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp TCCAAAGACCCAGAGAAAAATACTAAGGTAATACTCAGCCTCACGTCCACTCACTCTTGTTCTGGTTTGTaGTTCAGGTTTATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: SKDPEKNTKVILSLTSTHSCSGL*FRFIFY
Trigger: GTAGAAGATAAACCTGAACAACAAACCAGAACAAGA...GTGAGTGGACGTGAGGCTGAGTATTACCTTAGTATTTTTCTCTGGGTCTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGTGAGCTCGCTGCCTTaGAGCAACCAGTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIVSSLP*SNQFPF
Trigger: AAAAGGAAACTGGTTGCTCAAAGGCAGCGAGCTCAC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTGTGAGCTCGCTGCCTTaGAGCAACCAGTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TIISYKELSTYPSSRFLSVSSLP*SNQFPF
Trigger: AAAAGGAAACTGGTTGCTCAAAGGCAGCGAGCTCAC...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTCTCTCTTGTTCTGGTTaGTTGTTCAGGTTTATCTTC +
Preference number: 5 (lower is better)
Translates to: IIFWKLWLPITAILLALVLSCSG*LFRFIF
Trigger: GAAGATAAACCTGAACAACAAACCAGAACAAGAGAG...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTATTTGTCAGTCTCTCTaGTTCTGGTTTGTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: IIFWKLWLPITAILLALVICQSL*FWFVVQ
Trigger: CTGAACAACAAACCAGAACAAGAGAGACTGACAAAT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTGTTTCTTTAAGCTCTaGCCGAATAGCACCTCATGT +
Preference number: 5 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPCFFKL*PNSTSC
Trigger: ACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAACA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTATCTTCTGGAAGTTATGGCTTCCAATAACAGCCATCTTGCTTGCTCTCGTTAACTGTAAGCATCTGTaGCCATTTAAAGGCATTTGG +
Preference number: 5 (lower is better)
Translates to: IIFWKLWLPITAILLALVNCKHL*PFKGIW
Trigger: CCAAATGCCTTTAAATGGCAACAGATGCTTACAGTT...AACGAGAGCAAGCAAGATGGCTGTTATTGGAAGCCATAACTTCCAGAAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ATTAGAAGAGAAATCCAAAAAGAGGCCTCTACTGCCTTCATTCAAGTGTCGAGATTTCAAATGCAAACGTaGTGCAATGACCAGGTCATA +
Preference number: 5 (lower is better)
Translates to: IRREIQKEASTAFIQVSRFQMQT*CNDQVI
Trigger: TATGACCTGGTCATTGCACAACGTTTGCATTTGAAA...TCTCGACACTTGAATGAAGGCAGTAGAGGCCTCTTTTTGGATTTCTCTTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTCTCACACTAGTAGGCTaGAAGGAGGCAAATTTGGAC +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSILTLVG*KEANLD
Trigger: GTCCAAATTTGCCTCCTTCAAGCCTACTAGTGTGAG...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTTCACTGTCTTGCAGGTaGTCCCAAGAATTAGGAACA +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSISLSCR*SQELGT
Trigger: TGTTCCTAATTCTTGGGACAACCTGCAAGACAGTGA...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTAACTGTCTCACTGTCTaGCAGGTTGTCCCAAGAATT +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSINCLTV*QVVPRI
Trigger: AATTCTTGGGACAACCTGCAAGACAGTGAGACAGTT...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AATACTACACCATTTTATAGAAGGGGTTTGAGTATCCATGGAGTTTGGCATCCTTTATGTGCCCAGCCTTaGTTCCTCCAGAATTTTAAA +
Preference number: 5 (lower is better)
Translates to: NTTPFYRRGLSIHGVWHPLCAQP*FLQNFK
Trigger: TTTAAAATTCTGGAGGAACAAAGGCTGGGCACATAA...AGGATGCCAAACTCCATGGATACTCAAACCCCTTCTATAAAATGGTGTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTCTCTCTTGTTCTGGTTaGTTGTTCAGGTTTATCTTC +
Preference number: 5 (lower is better)
Translates to: TIISYKELSTYPSSRFLSLSCSG*LFRFIF
Trigger: GAAGATAAACCTGAACAACAAACCAGAACAAGAGAG...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTTTCAAATGCAAACGTaGTGCAATGACCAGGTCATA +
Preference number: 5 (lower is better)
Translates to: TIISYKELSTYPSSRFLSFQMQT*CNDQVI
Trigger: TATGACCTGGTCATTGCACAACGTTTGCATTTGAAA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS-3UTR CAA 90 bp ACCATTATCTCTTATAAGGAACTTAGCACATATCCTTCTAGCAGATTCTTGTCTTCTTGTTCTGGTTTGTaGTTCAGGTTTATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: TIISYKELSTYPSSRFLSSCSGL*FRFIFY
Trigger: GTAGAAGATAAACCTGAACAACAAACCAGAACAAGA...AGACAAGAATCTGCTAGAAGGATATGTGCTAAGTTCCTTATAAGAGATAATGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS-3UTR CAA 90 bp AGAAACTTTACTACTACTGTACACACATATTGTGTTGTGTGCACTTCGTCTATTGAAGACATCATTCATTaGATGGAAACCAGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: RNFTTTVHTYCVVCTSSIEDIIH*METSVC
Trigger: ACAAACACTGGTTTCCATCAAATGAATGATGTCTTC...AATAGACGAAGTGCACACAACACAATATGTGTGTACAGTAGTAGTAAAGTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
CDS GCA 72 bp CGTAGAGAGCGCGAGGCGCGGGGGTGCGGGCGTGCCTaGCAGTCCGAGGGGCCCAGGCCCAGGTCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: RREREARGCGRA*QSEGPRPRSLA
Trigger: GGCCAGGGACCTGGGCCTGGGCCCCTCGGACTGGCAGGCACGCCCGCACCCCCGCGCCTCGCGCTCTCTACG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS TCA 72 bp CTAAAGCGCAGCTCGCTCTCCCGCGCGCTTTCCTCCTaGGCAAGATGTCGCCGCGGCGGCCCGCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LKRSSLSRALSS*ARCRRGGPRSS
Trigger: GCTGGAGCGCGGGCCGCCGCGGCGACATCTTGCTCAGGAGGAAAGCGCGCGGGAGAGCGAGCTGCGCTTTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000483092.1
CDS CCA 72 bp CATCGTTACCGCCTAGGTGCGCAGCCAGGCATTCCCTaGCAGAGCCGCGTCCTCCGCGTCCTCGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: HRYRLGAQPGIP*QSRVLRVLGLR
Trigger: GCGGAGGCCGAGGACGCGGAGGACGCGGCTCTGCCAGGGAATGCCTGGCTGCGCACCTAGGCGGTAACGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS TCA 72 bp TTCCTTCATTCAAAAGCCCCTCCGCACAACAGGGAGTaGTTTCCATCGTTACCGCCTAGGTGCGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: FLHSKAPPHNRE*FPSLPPRCAAR
Trigger: CCTGGCTGCGCACCTAGGCGGTAACGATGGAAATCACTCCCTGTTGTGCGGAGGGGCTTTTGAATGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CCA 72 bp GGTTTGTTGTTCAGGTTTATCTTCTACATCTTTCACTaGCAGTGCTGGCAGAGCCGCGTCCTCCGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: GLLFRFIFYIFH*QCWQSRVLRVL
Trigger: GAGGACGCGGAGGACGCGGCTCTGCCAGCACTGCCAGTGAAAGATGTAGAAGATAAACCTGAACAACAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284617.7
ENST00000366687.5
CDS CAA 90 bp ATCTGGATTTGTGGTCATCCTCCAGCAGCTGCAGGAGGTTGCTGTTaGAGTTACTCCACCCGAAAATGCTCCTTAGTCCTTCCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: IWICGHPPAAAGGCC*SYSTRKCSLVLPCS
Trigger: GGAGCACGGAAGGACTAAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CAA 90 bp CGGAAAGATCTGGATTTGTGGTCATCCTCCAGCAGCTGCAGGAGGTaGCTGTTTGAGTTACTCCACCCGAAAATGCTCCTTAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RKDLDLWSSSSSCRR*LFELLHPKMLLSPS
Trigger: GGAAGGACTAAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS GCA 72 bp CGGAAAGATCTGGATTTGTGGTCATCCTCCAGCAGCTaGAGGAGGTTGCTGTTTGAGTTACTCCACCCGAAA +
Preference number: 6 (lower is better)
Translates to: RKDLDLWSSSSS*RRLLFELLHPK
Trigger: TTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCAGATCTTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CAA 72 bp TGTGGTCATCCTCCAGCAGCTGCAGGAGGTTGCTGTTaGAGTTACTCCACCCGAAAATGCTCCTTAGTCCTT +
Preference number: 6 (lower is better)
Translates to: CGHPPAAAGGCC*SYSTRKCSLVL
Trigger: AAGGACTAAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS GCA 72 bp TGGATTTGTGGTCATCCTCCAGCAGCTGCAGGAGGTTaGTGTTTGAGTTACTCCACCCGAAAATGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: WICGHPPAAAGG*CLSYSTRKCSL
Trigger: TAAGGAGCATTTTCGGGTGGAGTAACTCAAACAGCAACCTCCTGCAGCTGCTGGAGGATGACCACAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS GCA 72 bp GCTTTCCTGTTTCCTCTAGCAAATAAGGCACTTGGTTaGTGTCGAGGCTCAGTACTGGTGGGTGATTTGTCA +
Preference number: 6 (lower is better)
Translates to: AFLFPLANKALG*CRGSVLVGDLS
Trigger: TGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATTTGCTAGAGGAAACAGGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS GCA 72 bp AAAGAGGCTGTCCACGCAAGTGTTTCTTTAAGCTCTTaGCGAATAGCACCTCATGTATTCTGTCATCCACGG +
Preference number: 6 (lower is better)
Translates to: KEAVHASVSLSS*RIAPHVFCHPR
Trigger: CCGTGGATGACAGAATACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAACACTTGCGTGGACAGCCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CCA 72 bp ATAAGGCACTTGGTTGCTGTCGAGGCTCAGTACTGGTaGGTGATTTGTCAGTCTCTCTTGTTCTGGTTTGTT +
Preference number: 6 (lower is better)
Translates to: IRHLVAVEAQYW*VICQSLLFWFV
Trigger: AACAAACCAGAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CCA 72 bp CAAATAAGGCACTTGGTTGCTGTCGAGGCTCAGTACTaGTGGGTGATTTGTCAGTCTCTCTTGTTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: QIRHLVAVEAQY*WVICQSLLFWF
Trigger: AAACCAGAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CCA 72 bp AATTTAGCTAGCAGATCAGTACCCACAGGAATAATCTaGAAGGCATGTTCCCTACCCCCTCCACCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: NLASRSVPTGII*KACSLPPPPSV
Trigger: AACAGAAGGTGGAGGGGGTAGGGAACATGCCTTCCAGATTATTCCTGTGGGTACTGATCTGCTAGCTAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366686.1
CDS CAA 90 bp GGGCTTTCTCCGCAATCCCCCAAGATAAATCCAATCATCTCAATTTaGCTTTCCTTCACGGAAAGATCTGGATTTGTGGTCATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GLSPQSPKINPIISI*LSFTERSGFVVILQ
Trigger: CTGGAGGATGACCACAAATCCAGATCTTTCCGTGAAGGAAAGCAAAATTGAGATGATTGGATTTATCTTGGGGGATTGCGGAGAAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483092.1
CDS CAA 72 bp AAAAGAGGCTGTCCACGCAAGTGTTTCTTTAAGCTCTaGCCGAATAGCACCTCATGTATTCTGTCATCCACG +
Preference number: 6 (lower is better)
Translates to: KRGCPRKCFFKL*PNSTSCILSST
Trigger: CGTGGATGACAGAATACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAACACTTGCGTGGACAGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CAA 90 bp GTTGCTGTCGAGGCTCAGTACTGGTGGGTGATTTGTCAGTCTCTCTaGTTCTGGTTTGTTGTTCAGGTTTATCTTCTACATCTTTCACTG +
Preference number: 6 (lower is better)
Translates to: VAVEAQYWWVICQSL*FWFVVQVYLLHLSL
Trigger: CAGTGAAAGATGTAGAAGATAAACCTGAACAACAAACCAGAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CAA 90 bp AATAAGGCACTTGGTTGCTGTCGAGGCTCAGTACTGGTGGGTGATTaGTCAGTCTCTCTTGTTCTGGTTTGTTGTTCAGGTTTATCTTCT +
Preference number: 6 (lower is better)
Translates to: NKALGCCRGSVLVGD*SVSLVLVCCSGLSS
Trigger: AGAAGATAAACCTGAACAACAAACCAGAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CAA 90 bp ACACTTTTTAAAAGAGGCTGTCCACGCAAGTGTTTCTTTAAGCTCTaGCCGAATAGCACCTCATGTATTCTGTCATCCACGGGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: TLFKRGCPRKCFFKL*PNSTSCILSSTGSL
Trigger: CAGAGAACCCGTGGATGACAGAATACATGAGGTGCTATTCGGCAAGAGCTTAAAGAAACACTTGCGTGGACAGCCTCTTTTAAAAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS CAA 72 bp GAGGCTCAGTACTGGTGGGTGATTTGTCAGTCTCTCTaGTTCTGGTTTGTTGTTCAGGTTTATCTTCTACAT +
Preference number: 6 (lower is better)
Translates to: EAQYWWVICQSL*FWFVVQVYLLH
Trigger: ATGTAGAAGATAAACCTGAACAACAAACCAGAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284617.7
ENST00000366686.1
ENST00000366687.5
ENST00000483092.1
CDS TCA 72 bp AAGCTTATTCAAAAGCAACCACTGCTACTCCGATTCTaGGACTTAGCATCTGGAATGTTAAAAGATAGACAG +
Preference number: 6 (lower is better)
Translates to: KLIQKQPLLLRF*DLASGMLKDRQ
Trigger: CTGTCTATCTTTTAACATTCCAGATGCTAAGTCTCAGAATCGGAGTAGCAGTGGTTGCTTTTGAATAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483092.1