RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCR9 (Homo sapiens)

Ensembl gene IDs: ENSG00000173585

Ensembl transcript IDs: ENST00000355983.3, ENST00000357632.7, ENST00000395963.2, ENST00000422395.1, ENST00000463197.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTaGGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: WQSQGAPQCRSLVLL*ELRASQSRANQQPP
Trigger: AGGAGGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR TCA 90 bp AGAGAACAGGGTTCAGGCAACTGTGGAAGAAGGCGATGGTCTGGGTaGCCTGGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGG +
Preference number: 1 (lower is better)
Translates to: REQGSGNCGRRRWSG*PGSRCQCWWKRHSW
Trigger: CCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCCTGTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR GCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATaGCTTGTGGGTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGAC +
Preference number: 1 (lower is better)
Translates to: LQQDTEMDWKPTDFG*LVGVVSCPGVHWQD
Trigger: GTCTTGCCAGTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CCA 90 bp ACAGGGTTCAGGCAACTGTGGAAGAAGGCGATGGTCTGGGTGACCTaGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGGAGATG +
Preference number: 1 (lower is better)
Translates to: TGFRQLWKKAMVWVT*KQMSMLVETAQLEM
Trigger: CATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp AGCTTCAAGCTTCCCTCTCTCCTTGTAAATGAAACCCACTGGGCCTaGCTGATGCAACCCAAGTTCTTCAGGGTTTTCACGAGATCCCGG +
Preference number: 1 (lower is better)
Translates to: SFKLPSLLVNETHWA*LMQPKFFRVFTRSR
Trigger: CCGGGATCTCGTGAAAACCCTGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTCATTTACAAGGAGAGAGGGAAGCTTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR TCA 90 bp CAGCAACATAGACGACAGCTTCAAGCTTCCCTCTCTCCTTGTAAATaGAACCCACTGGGCCTGGCTGATGCAACCCAAGTTCTTCAGGGT +
Preference number: 1 (lower is better)
Translates to: QQHRRQLQASLSPCK*NPLGLADATQVLQG
Trigger: ACCCTGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTCATTTACAAGGAGAGAGGGAAGCTTGAAGCTGTCGTCTATGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp CAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGGTGTaGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTT +
Preference number: 1 (lower is better)
Translates to: QKWIGSQQTLDALWV*SVVQGFTGKTCRSF
Trigger: AAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CCA 90 bp TACATGCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTGACAAGAAAG +
Preference number: 1 (lower is better)
Translates to: YMLLTTLHMKVWNFH*SAAAMAQKGRVTRK
Trigger: CTTTCTTGTCACTCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp CTGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTaGGCAATGGCAATGTACCTGTCCACGCTGATGCACATGATCAGC +
Preference number: 1 (lower is better)
Translates to: LYKSLFSLQVCALMA*AMAMYLSTLMHMIS
Trigger: GCTGATCATGTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp GACGACAGCTTCAAGCTTCCCTCTCTCCTTGTAAATGAAACCCACTaGGCCTGGCTGATGCAACCCAAGTTCTTCAGGGTTTTCACGAGA +
Preference number: 1 (lower is better)
Translates to: DDSFKLPSLLVNETH*AWLMQPKFFRVFTR
Trigger: TCTCGTGAAAACCCTGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTCATTTACAAGGAGAGAGGGAAGCTTGAAGCTGTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp AAGTTCATCTTGTACATGCTGTTGACCACCTTGCACATGAAGGTCTaGAACTTCCACTGGTCAGCAGCAGCAATGGCCCAGAAGGGAAGA +
Preference number: 1 (lower is better)
Translates to: KFILYMLLTTLHMKV*NFHWSAAAMAQKGR
Trigger: TCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCATGTACAAGATGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR TCA 90 bp TGCAGTTGTAGGGAAACTGAGACAAGACAAAGACGGTCAGGACAGTaGTGGTCACTTTTAGGGCTTTGTGCTTGGAAGACTTCTTGGCTT +
Preference number: 1 (lower is better)
Translates to: CSCRETETRQRRSGQ*WSLLGLCAWKTSWL
Trigger: AAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCTTTGTCTTGTCTCAGTTTCCCTACAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 90 bp GGCAAGACCTGCAGATCGTTTCAAAATCAGAACAAGGACCTTCACTaGCCCAGAACAGAACAAGGAGAACAGAAGGAAATTAGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: GKTCRSFQNQNKDLH*PRTEQGEQKEIRSE
Trigger: CTCAGACCTAATTTCCTTCTGTTCTCCTTGTTCTGTTCTGGGCCAGTGAAGGTCCTTGTTCTGATTTTGAAACGATCTGCAGGTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR TCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACACAGAGGCAGCGGCATTaGTGCTCCGGCGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: ASASVSPFGRGSMRTEATQRQRH*CSGEWQ
Trigger: TTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTG...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACATCCTCCTTTGAGAATTaGGGGCATCACAGTCAAGAG +
Preference number: 2 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTSSFEN*GHHSQE
Trigger: CTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGA...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR TCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTCAGAGGCAGCGGCATTaGTGCTCCGGCGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVQRQRH*CSGEWQ
Trigger: TTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTG...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR TCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGCAGAGGCAGCGGCATTaGTGCTCCGGCGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWQRQRH*CSGEWQ
Trigger: TTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTG...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAGATGCCTTGTGGGTGTaGTCAGTTGTCCAGGGGTTC +
Preference number: 2 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIDALWV*SVVQGF
Trigger: GAACCCCTGGACAACTGACCACACCCACAAGGCATC...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAGTGGCAAAGCCAGGGTaGTCCACAGTGCCGGTCCTT +
Preference number: 2 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEVAKPG*STVPVL
Trigger: AAGGACCGGCACTGTGGAGCACCCTGGCTTTGCCAC...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACAACAAGGACCTTCACTaGCCCAGAACAGAACAAGGA +
Preference number: 2 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHNKDLH*PRTEQG
Trigger: TCCTTGTTCTGTTCTGGGCCAGTGAAGGTCCTTGTT...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAGAAGCCAACAGACTTTaGATGCCTTGTGGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIEANRL*MPCGCG
Trigger: ACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTC...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: PFLPPSMCSHGLGNGNVPVWNFH*SAAAMA
Trigger: GGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGAC...AGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CAA 90 bp GGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGGTGTGGTCAGTaGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: GLEANRLWMPCGCGQ*SRGSLARPADRFKI
Trigger: GATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGTGTAGCAGCAGCCAGTaGTTCTGTGTCCCCTTTTGG +
Preference number: 2 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWCSSSQ*FCVPFW
Trigger: CCAAAAGGGGACACAGAAGCACTGGCTGCTGCTACA...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTTCACTGGCAAGACCTaGAGATCGTTTCAAAATCAG +
Preference number: 2 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHFTGKT*RSFQNQ
Trigger: CTGATTTTGAAACGATCTGCAGGTCTTGCCAGTGAA...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp GGTGACCTGGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGGAGATGAACTCCCTCCAAGTATGTaGTCTCATGGCCTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: GDLEADVNVGGNGTVGDELPPSM*SHGLGN
Trigger: ATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAG...TTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATCTCTTTCACTCTCTCTaGTCCCATCAGTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNLFHSL*SHQWGN
Trigger: GTTTCCCCACTGATGGGACCAGAGAGAGTGAAAGAG...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAAGGTCTGAGATTGCCTaGAAAGGTTCTAGATCAGGA +
Preference number: 2 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIRSEIA*KGSRSG
Trigger: TCCTGATCTAGAACCTTTCCAGGCAATCTCAGACCT...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp GATGAACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGTCATGGCCTGGGCAATaGCAATGTACCTGTCCACGC +
Preference number: 2 (lower is better)
Translates to: DEHGIGVNGLHQQNAVVGSWPGQ*QCTCPR
Trigger: GCGTGGACAGGTACATTGCCATTGCCCAGGCCATGA...CCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR TCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGAGGCAGCATGAGAACTaGAGCCACAGAAGTTCACAG +
Preference number: 2 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVRQHEN*SHRSSQ
Trigger: CTGTGAACTTCTGTGGCTTCAGTTCTCATGCTGCCT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATTCCTCCTTTGAGAATTaGGGGCATCACAGTCAAGAG +
Preference number: 2 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNSSFEN*GHHSQE
Trigger: CTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGA...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATGTAGCAGCAGCCAGTaGTTCTGTGTCCCCTTTTGG +
Preference number: 2 (lower is better)
Translates to: CYNLPAQAMERHCHHTKECSSSQ*FCVPFW
Trigger: CCAAAAGGGGACACAGAAGCACTGGCTGCTGCTACA...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATCTCTTTCACTCTCTCTaGTCCCATCAGTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNLFHSL*SHQWGN
Trigger: GTTTCCCCACTGATGGGACCAGAGAGAGTGAAAGAG...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAACAAGGACCTTCACTaGCCCAGAACAGAACAAGGA +
Preference number: 2 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNNKDLH*PRTEQG
Trigger: TCCTTGTTCTGTTCTGGGCCAGTGAAGGTCCTTGTT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATGTCCAGGGGTTCACTaGCAAGACCTGCAGATCGTT +
Preference number: 2 (lower is better)
Translates to: CYNLPAQAMERHCHHTKECPGVH*QDLQIV
Trigger: AACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACA...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAGACACAGAAATGGATTaGAAGCCAACAGACTTTGGA +
Preference number: 2 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIDTEMD*KPTDFG
Trigger: TCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTC...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR TCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAAGGCAGCATGAGAACTaGAGCCACAGAAGTTCACAG +
Preference number: 2 (lower is better)
Translates to: CYNLPAQAMERHCHHTKERQHEN*SHRSSQ
Trigger: CTGTGAACTTCTGTGGCTTCAGTTCTCATGCTGCCT...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR TCA 90 bp ACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTCAGGGTCAAGACAGCTaGCTTCAGTTTGGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TWHRRQWSAPTKCSCRETQGQDS*LQFGAL
Trigger: GAGAGCACCAAACTGAAGTCAGCTGTCTTGACCCTG...AGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATCTCTGGTCCCATCAGTaGGGAAACTGTTTCTGTATT +
Preference number: 2 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNLWSHQ*GNCFCI
Trigger: AATACAGAAACAGTTTCCCCACTGATGGGACCAGAG...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGAACAAGGACCTTCACTaGCCCAGAACAGAACAAGGA +
Preference number: 2 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWNKDLH*PRTEQG
Trigger: TCCTTGTTCTGTTCTGGGCCAGTGAAGGTCCTTGTT...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CAA 90 bp GAATCCTTGTCTAGGTTAAAACCTCCAGCAGGACACAGAAATGGATaGGAAGCCAACAGACTTTGGATGCCTTGTGGGTGTGGTCAGTTG +
Preference number: 2 (lower is better)
Translates to: ESLSRLKPPAGHRNG*EANRLWMPCGCGQL
Trigger: CAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAGGTTTTAACCTAGACAAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGCTCTGGTCCCATCAGTaGGGAAACTGTTTCTGTATT +
Preference number: 2 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWLWSHQ*GNCFCI
Trigger: AATACAGAAACAGTTTCCCCACTGATGGGACCAGAG...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CCA 90 bp CATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGAAGTATGTGCTCTCATaGCCTGGGCAATGGCAATGT +
Preference number: 2 (lower is better)
Translates to: HGIGVNGLHQQNAVVGKLKYVLS*PGQWQC
Trigger: ACATTGCCATTGCCCAGGCCATGAGAGCACATACTT...CAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR GCA 90 bp CATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGAGACAGATGCAGAGAGCAGCTaGCAATACCCAGATGGTAAA +
Preference number: 2 (lower is better)
Translates to: HRRQWSAPTKCSCRETETDAESS*QYPDGK
Trigger: TTTACCATCTGGGTATTGGCAGCTGCTCTCTGCATC...TGTCTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR TCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATTGGAAGAGGCAGCATaGGAACTGAAGCCACAGAAG +
Preference number: 2 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRLEEAA*ELKPQK
Trigger: CTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp GATGAACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGATAAGATTTCTGGGATaGAGAGAGCAGCTGCCAATA +
Preference number: 2 (lower is better)
Translates to: DEHGIGVNGLHQQNAVVGIRFLG*REQLPI
Trigger: TATTGGCAGCTGCTCTCTGCATCCCAGAAATCTTAT...CCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR GCA 90 bp TTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGGGTTCTGCACCAACAAAATaGAGTTGTAGGGAAACTGAG +
Preference number: 2 (lower is better)
Translates to: FSRDPGGISHPQKHREQGSAPTK*SCRETE
Trigger: CTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGA...ACCCTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAGACACAGAAATGGATTaGAAGCCAACAGACTTTGGA +
Preference number: 2 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEDTEMD*KPTDFG
Trigger: TCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTC...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp CATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGAGACAACTTTTAGGGCTTTGTaGTTGGAAGACTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: HRRQWSAPTKCSCRETETTFRAL*LEDFLA
Trigger: AGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGT...TGTCTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGACTCTGGTCCCATCAGTaGGGAAACTGTTTCTGTATT +
Preference number: 2 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRLWSHQ*GNCFCI
Trigger: AATACAGAAACAGTTTCCCCACTGATGGGACCAGAG...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGACAATCAACAGCCTCCTaGACTAGTCAGTTGATTTTG +
Preference number: 2 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRQSTAS*TSQLIL
Trigger: CAAAATCAACTGACTAGTGCAGGAGGCTGTTGATTG...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR GCA 90 bp GCAGCTGCCAATACCCAGATGGTAAAGCAAACCATTTTGCTGTACAAAAGCCTTGAGGAGGTCAGCAATTaGCAAATTCAAAAGGAACAT +
Preference number: 2 (lower is better)
Translates to: AAANTQMVKQTILLYKSLEEVSN*QIQKEH
Trigger: ATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTC...AAGGCTTTTGTACAGCAAAATGGTTTGCTTTACCATCTGGGTATTGGCAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR GCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCCAATCAACAGCCTCCTaGACTAGTCAGTTGATTTTG +
Preference number: 2 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSQSTAS*TSQLIL
Trigger: CAAAATCAACTGACTAGTGCAGGAGGCTGTTGATTG...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATACCAGAGGCAGCGGCATaGATGCTCCGGCGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIPEAAA*MLRRVA
Trigger: TGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATACAGACTTTGGATGCCTaGTGGGTGTGGTCAGTTGTC +
Preference number: 3 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIQTLDA*WVWSVV
Trigger: GACAACTGACCACACCCACAAGGCATCCAAAGTCTG...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR TCA 72 bp CAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTaGGAATTGCGGGCATCACAGTCAAGAGCCAATCAA +
Preference number: 3 (lower is better)
Translates to: QGAPQCRSLVLL*ELRASQSRANQ
Trigger: TTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CCA 72 bp ATTGGAAGCCAACAGACTTTGGATGCCTTGTGGGTGTaGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGC +
Preference number: 3 (lower is better)
Translates to: IGSQQTLDALWV*SVVQGFTGKTC
Trigger: GCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CCA 72 bp TTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: LTTLHMKVWNFH*SAAAMAQKGRV
Trigger: CACTCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 72 bp AGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTaGGCAATGGCAATGTACCTGTCCACGCTGATGCAC +
Preference number: 3 (lower is better)
Translates to: SLFSLQVCALMA*AMAMYLSTLMH
Trigger: GTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 72 bp AGGCAACTGTGGAAGAAGGCGATGGTCTGGGTGACCTaGAAGCAGATGTCAATGTTGGTGGAAACGGCACAG +
Preference number: 3 (lower is better)
Translates to: RQLWKKAMVWVT*KQMSMLVETAQ
Trigger: CTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CCA 72 bp ACAGGGTTCAGGCAACTGTGGAAGAAGGCGATGGTCTaGGTGACCTGGAAGCAGATGTCAATGTTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: TGFRQLWKKAMV*VTWKQMSMLVE
Trigger: TTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CAA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGTCCTTAGTCCTCCTTaGAGAATTGCGGGCATCACA +
Preference number: 3 (lower is better)
Translates to: ASASVSPFGRGSMRTEATVLSPP*RIAGIT
Trigger: TGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGAC...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATGTCCTTAGTCCTCCTTaGAGAATTGCGGGCATCACA +
Preference number: 3 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNVLSPP*RIAGIT
Trigger: TGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGAC...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGCGAAACTTTCTGCTTTaGCGGTCTGTAGCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVRNFLL*RSVAAA
Trigger: GGCTGCTGCTACAGACCGCAAAAGCAGAAAGTTTCG...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp CCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTATGCTGTTGACCACCTaGCACATGAAGGTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: PFLPPSMCSHGLGNGNVPMLLTT*HMKVWN
Trigger: GTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCAT...AGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR TCA 72 bp CCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATaGGAACTGAAGCCACAGAAGTTCACAGTGCATGGA +
Preference number: 3 (lower is better)
Translates to: PVLLCPLLEEAA*ELKPQKFTVHG
Trigger: TCCATGCACTGTGAACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR GCA 72 bp GACACAGAAATGGATTGGAAGCCAACAGACTTTGGATaGCTTGTGGGTGTGGTCAGTTGTCCAGGGGTTCAC +
Preference number: 3 (lower is better)
Translates to: DTEMDWKPTDFG*LVGVVSCPGVH
Trigger: GTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGGTCCTTAGTCCTCCTTaGAGAATTGCGGGCATCACA +
Preference number: 3 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWVLSPP*RIAGIT
Trigger: TGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGAC...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAACAGACTTTGGATGCCTaGTGGGTGTGGTCAGTTGTC +
Preference number: 3 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEQTLDA*WVWSVV
Trigger: GACAACTGACCACACCCACAAGGCATCCAAAGTCTG...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR GCA 72 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTaGAGATCGTTTCAAAATCAGAACAAGGACCTTCAC +
Preference number: 3 (lower is better)
Translates to: VWSVVQGFTGKT*RSFQNQNKDLH
Trigger: GTGAAGGTCCTTGTTCTGATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR-3UTR CAA 90 bp TTCAGGCAACTGTGGAAGAAGGCGATGGTCTGGGTGACCTGGAAGCAGATGTCAATGCCGGATTCCTCCTaGATTTGGCTGTATAAGATT +
Preference number: 3 (lower is better)
Translates to: FRQLWKKAMVWVTWKQMSMPDSS*IWLYKI
Trigger: AATCTTATACAGCCAAATCAAGGAGGAATCCGGCAT...TGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CAA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAGGACACAGAAATGGATaGGAAGCCAACAGACTTTGG +
Preference number: 3 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEGHRNG*EANRLW
Trigger: CCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCC...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR TCA 72 bp AGGGAAACTGAGACAAGACAAAGACGGTCAGGACAGTaGTGGTCACTTTTAGGGCTTTGTGCTTGGAAGACT +
Preference number: 3 (lower is better)
Translates to: RETETRQRRSGQ*WSLLGLCAWKT
Trigger: AGTCTTCCAAGCACAAAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCTTTGTCTTGTCTCAGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR-3UTR CAA 90 bp GATGAACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAGAGGAGGTCAGCAATaGCCAAATTCAAAAGGAACA +
Preference number: 3 (lower is better)
Translates to: DEHGIGVNGLHQQNAVVGRGGQQ*PNSKGT
Trigger: TGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCT...CCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTGTGGCAAAGCCAGGGTaGTCCACAGTGCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPVAKPG*STVPVL
Trigger: AAGGACCGGCACTGTGGAGCACCCTGGCTTTGCCAC...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACACCAAGGCACCCACGATaGACACGAGCCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTPRHPR*TRASTR
Trigger: CCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTGG...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGGAGCAGACAGACGGTaGACCCAAAGCAAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTGADRR*TQSKCH
Trigger: GTGGCACTTGCTTTGGGTCCACCGTCTGTCTGCTCC...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTGAGGGAGAGTGCTCCTaGGGTTGTCTCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPEGECS*GCLQQH
Trigger: ATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTC...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCCAGAGGCAGCGGCATTaGTGCTCCGGCGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGQRQRH*CSGEWQ
Trigger: TTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTG...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTAGGCTTTGTGGGTTCTaGGCAGGCAGCTACCCGATA +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPRLCGF*AGSYPI
Trigger: TATCGGGTAGCTGCCTGCTCAGAACCCACAAAGCCT...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395963.2
CDS-3UTR TCA 90 bp AAGGTCTGGAACTTCCACTGGTCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTGGCCAGCGAGGGAAGGTaGTCTGGAGCGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KVWNFHWSAAAMAQKGRVASEGR*SGAGPG
Trigger: TCCAGGCCCCGCTCCAGATCACCTTCCCTCGCTGGC...CACTCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTGCCCTACCTGGCTGCTaGCCATATCTGCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPALPGC*PYLLTV
Trigger: TACAGTGAGCAGATATGGGCAGCAGCCAGGTAGGGC...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPVWNFH*SAAAMA
Trigger: GGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGAC...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACGCTCTCTGCCTGGGATaGGGGGCAGGCTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHALCLG*GAGFVG
Trigger: ACCCACAAAGCCTGCCCCTCATCCCAGGCAGAGAGC...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACATTTGCCCTACCTGGCTaGTGCCCATATCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTFALPG*CPYLLT
Trigger: AGTGAGCAGATATGGGCAGCAGCCAGGTAGGGCAAA...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAAGACGGTCAGGACAGTaGTGGTCACTTTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTRRSGQ*WSLLGL
Trigger: AAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCT...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCGGTGGGTCAGTCAGATaGAAGCCTGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGGGSVR*KPALWR
Trigger: CCTCCACAGAGCAGGCTTGCATCTGACTGACCCACC...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357632.7
CDS-3UTR TCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACCCAAGGCACCCACGATaGACACGAGCCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHPRHPR*TRASTR
Trigger: CCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTGG...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACGGAGCAGACAGACGGTaGACCCAAAGCAAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHGADRR*TQSKCH
Trigger: GTGGCACTTGCTTTGGGTCCACCGTCTGTCTGCTCC...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACCCAGCTCTCAGTGTCTaGGGAAAGAGCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHPALSV*GKSWVA
Trigger: AGCAACCCAGCTCTTTCCCCAGACACTGAGAGCTGG...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACACGATGCAACTCTCCCTaGGACAGCAGGCACCACCAG +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATRCNSP*DSRHHQ
Trigger: CTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCG...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCGAGCCAGTACAAGGGTaGGAGGAAATGGCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGEPVQG*EEMARK
Trigger: TTTGCGAGCCATTTCCTCCCACCCTTGTACTGGCTC...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAAGGTCTGAGATTGCCTaGAAAGGTTCTAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTRSEIA*KGSRSG
Trigger: TCCTGATCTAGAACCTTTCCAGGCAATCTCAGACCT...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCTCCCTGCTCAGGCCATaGAGAGACACTGTCACCATA +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGSLLRP*RDTVTI
Trigger: TATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACATTCCTCAGAATAAAGTaGGCCTCAGAAAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTFLRIK*ASERRG
Trigger: CCCTCTTCTTTCTGAGGCCCACTTTATTCTGAGGAA...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCCTGGGCAATGGCAATGTACCTGTCCACGCTGATGCACATGATCAGCAACACAGGTCCTGGAAGGAGATaGATTCCTGGGCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: AWAMAMYLSTLMHMISNTGPGRR*IPGPAR
Trigger: CCTCGCTGGCCCAGGAATCCATCTCCTTCCAGGACC...TGTGTTGCTGATCATGTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGCTCTCTGCCTGGGATaGGGGGCAGGCTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAALCLG*GAGFVG
Trigger: ACCCACAAAGCCTGCCCCTCATCCCAGGCAGAGAGC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTCAATCAACAGCCTCCTaGACTAGTCAGTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: GIDAPASGKARVLHSAGPQSTAS*TSQLIL
Trigger: CAAAATCAACTGACTAGTGCAGGAGGCTGTTGATTG...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCTGGACCCAAAGCAAGTaGCACTCAACAGAACAAGCC +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGWTQSK*HSTEQA
Trigger: GGCTTGTTCTGTTGAGTGGCACTTGCTTTGGGTCCA...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATCGATGCAACTCTCCCTaGGACAGCAGGCACCACCAG +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNRCNSP*DSRHHQ
Trigger: CTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCG...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCTCATGGCCTGGGCAATaGCAATGTACCTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: AVDHLAHEGLELPLVSSSSWPGQ*QCTCPR
Trigger: GCGTGGACAGGTACATTGCCATTGCCCAGGCCATGA...GCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CTCATGGCCTGGGCAATGGCAATGTACCTGTCCACGCTGATGCACATGATCAGCGAAACCCACTGGGCCTaGCTGATGCAACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LMAWAMAMYLSTLMHMISETHWA*LMQPKF
Trigger: GAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTC...GCTGATCATGTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCCTCTTTCACTCTCTCTaGTCCCATCAGTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGLFHSL*SHQWGN
Trigger: GTTTCCCCACTGATGGGACCAGAGAGAGTGAAAGAG...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGCAACAGGGCCAAGGCTaGCTCCTGCGAACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVQQGQG*LLRTQL
Trigger: CAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTG...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
3UTR CAA 72 bp CCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTaGAGAATTGCGGGCATCACAGTCAAGAGCCAATCA +
Preference number: 4 (lower is better)
Translates to: PGCSTVPVLSPP*RIAGITVKSQS
Trigger: TGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
3UTR CAA 72 bp GCCAACAGACTTTGGATGCCTTGTGGGTGTGGTCAGTaGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: ANRLWMPCGCGQ*SRGSLARPADR
Trigger: ACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACACCCACAAGGCATCCAAAGTCTGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355983.3
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATACAGGGTCAAGACAGCTaGCTTCAGTTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIQGQDS*LQFGAL
Trigger: GAGAGCACCAAACTGAAGTCAGCTGTCTTGACCCTG...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCCAGGGTCAAGACAGCTaGCTTCAGTTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AVDHLAHEGLELPLVSSSQGQDS*LQFGAL
Trigger: GAGAGCACCAAACTGAAGTCAGCTGTCTTGACCCTG...GCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAGGAAGAACCCCAGAATaGCCTTCAGGGTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIGRTPE*PSGSRQ
Trigger: CTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCC...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACAGGCAGCATGAGAACTaGAGCCACAGAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHRQHEN*SHRSSQ
Trigger: CTGTGAACTTCTGTGGCTTCAGTTCTCATGCTGCCT...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTTGGAAGAGGCAGCATaGGAACTGAAGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHLEEAA*ELKPQK
Trigger: CTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAA...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGGGAAAGAGCTGGGTTaGTCTCTGCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PFLPPSMCSHGLGNGNVPGKELG*SLPGMR
Trigger: CCTCATCCCAGGCAGAGAGCAACCCAGCTCTTTCCC...AGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAAAATGGCTCGCAAACTaGCTGACATTGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTKWLAN*LTLFFS
Trigger: TGAGAAAAACAATGTCAGGCAGTTTGCGAGCCATTT...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATCAGGGTGCTCCACAGTaGCGGTCCTTAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNQGAPQ*RSLVLL
Trigger: AAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTG...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGTGGCAAAGCCAGGGTaGTCCACAGTGCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAVAKPG*STVPVL
Trigger: AAGGACCGGCACTGTGGAGCACCCTGGCTTTGCCAC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp ACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCTGTGGGTGTCATGGTaGGTCAGTCAGATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TVPVLSPPLRIAGITVKSLWVSW*VSQMQA
Trigger: GGCTTGCATCTGACTGACCCACCATGACACCCACAG...GCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357632.7
CDS-3UTR CCA 90 bp GCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCGAGCCAGTACAAGGGTaGGAGGAAATGGCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: AVDHLAHEGLELPLVSSSEPVQG*EEMARK
Trigger: TTTGCGAGCCATTTCCTCCCACCCTTGTACTGGCTC...GCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCTGGCATAGGCGTCAATaGTCTGCACCAACAAAATGC +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGWHRRQ*SAPTKC
Trigger: GCATTTTGTTGGTGCAGACCATTGACGCCTATGCCA...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAACCCACTGGGCCTaGCTGATGCAACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATETHWA*LMQPKF
Trigger: GAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTC...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGATGCCTTGTGGGTGTaGTCAGTTGTCCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATDALWV*SVVQGF
Trigger: GAACCCCTGGACAACTGACCACACCCACAAGGCATC...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACGAAGCCAACAGACTTTaGATGCCTTGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHEANRL*MPCGCG
Trigger: ACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTC...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAACAACAGGGCCAAGGCTaGCTCCTGCGAACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEQQGQG*LLRTQL
Trigger: CAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTG...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GATGAACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGCGAGGGAAGGTGATCTaGAGCGGGGCCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DEHGIGVNGLHQQNAVVGRGKVI*SGAWRR
Trigger: TCTCCTCCAGGCCCCGCTCCAGATCACCTTCCCTCG...CCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp ACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCGGAAGAACCCCAGAATaGCCTTCAGGGTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: TVPVLSPPLRIAGITVKSGRTPE*PSGSRQ
Trigger: CTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCC...GCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CTCATGGCCTGGGCAATGGCAATGTACCTGTCCACGCTGATGCACATGATCAGCAGACGGTCAGGACAGTaGTGGTCACTTTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LMAWAMAMYLSTLMHMISRRSGQ*WSLLGL
Trigger: AAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCT...GCTGATCATGTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGCCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCCCCACTGGGCCTGGCTaGTGCAACCCAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAPTGPG*CNPSSS
Trigger: TGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGG...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGGGAAAGAGCTGGGTTaGTCTCTGCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAGKELG*SLPGMR
Trigger: CCTCATCCCAGGCAGAGAGCAACCCAGCTCTTTCCC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGTGGTGGGTCAGTCAGATaGAAGCCTGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSPSKYVLSWPGQWQCTCGGSVR*KPALWR
Trigger: CCTCCACAGAGCAGGCTTGCATCTGACTGACCCACC...ACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTCCAGCTCTCAGTGTCTaGGGAAAGAGCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PFLPPSMCSHGLGNGNVPPALSV*GKSWVA
Trigger: AGCAACCCAGCTCTTTCCCCAGACACTGAGAGCTGG...AGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGTGCAAGCCTGCTCTGTaGAGGGCGATGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVCKPAL*RAMQLS
Trigger: GGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGCA...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357632.7
CDS-3UTR CCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAAAGGGTGGGAGGAAATaGCTCGCAAACTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATKGGRK*LANCLT
Trigger: TGTCAGGCAGTTTGCGAGCCATTTCCTCCCACCCTT...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TTCAGGCAACTGTGGAAGAAGGCGATGGTCTGGGTGACCTGGAAGCAGATGTCAAAGGGTGGGAGGAAATaGCTCGCAAACTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: FRQLWKKAMVWVTWKQMSKGGRK*LANCLT
Trigger: TGTCAGGCAGTTTGCGAGCCATTTCCTCCCACCCTT...TGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACAAGTATGTGCTCTCATaGCCTGGGCAATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHKYVLS*PGQWQC
Trigger: ACATTGCCATTGCCCAGGCCATGAGAGCACATACTT...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGGCATAGGCGTCAATaGTCTGCACCAACAAAATGC +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHWHRRQ*SAPTKC
Trigger: GCATTTTGTTGGTGCAGACCATTGACGCCTATGCCA...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
3UTR CAA 72 bp GCGATGGTCTGGGTGACCTGGAAGCAGATGTCAATGTaGGTGGAAACGGCACAGTTGGAGATGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: AMVWVTWKQMSM*VETAQLEMNMA
Trigger: TGCCATGTTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGACCATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGGAAGAACCCCAGAATaGCCTTCAGGGTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: PFLPPSMCSHGLGNGNVPGRTPE*PSGSRQ
Trigger: CTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCC...AGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATAGGCGATGGTCTGGGTaGCCTGGAAGCAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNRRWSG*PGSRCQ
Trigger: TTGACATCTGCTTCCAGGTCACCCAGACCATCGCCT...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp TTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGTAGGCGATGGTCTGGGTaGCCTGGAAGCAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: FSPSKYVLSWPGQWQCTCRRWSG*PGSRCQ
Trigger: TTGACATCTGCTTCCAGGTCACCCAGACCATCGCCT...ACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp ACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCTCCTTAGTCCTCCTTTaGGAATTGCGGGCATCACAG +
Preference number: 4 (lower is better)
Translates to: TVPVLSPPLRIAGITVKSSLVLL*ELRASQ
Trigger: CTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGA...GCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAAGGCAGCATGAGAACTaGAGCCACAGAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATRQHEN*SHRSSQ
Trigger: CTGTGAACTTCTGTGGCTTCAGTTCTCATGCTGCCT...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCCAATCAACAGCCTCCTaGACTAGTCAGTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGQSTAS*TSQLIL
Trigger: CAAAATCAACTGACTAGTGCAGGAGGCTGTTGATTG...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCTCATGGCCTGGGCAATaGCAATGTACCTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTASWPGQ*QCTCPR
Trigger: GCGTGGACAGGTACATTGCCATTGCCCAGGCCATGA...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTTCATGGCCTGGGCAATaGCAATGTACCTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVSWPGQ*QCTCPR
Trigger: GCGTGGACAGGTACATTGCCATTGCCCAGGCCATGA...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAAGAAGGCGATGGTCTaGGTGACCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNKKAMV*VTWKQM
Trigger: CATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTGGGTTCAGGCAACTGTaGAAGAAGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVGFRQL*KKAMVW
Trigger: CCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCC...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATGAAACCCACTGGGCCTaGCTGATGCAACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNETHWA*LMQPKF
Trigger: GAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTC...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAAACAAGGACCTTCACTaGCCCAGAACAGAACAAGGA +
Preference number: 4 (lower is better)
Translates to: QNKPTTGPRLAPANPAVINKDLH*PRTEQG
Trigger: TCCTTGTTCTGTTCTGGGCCAGTGAAGGTCCTTGTT...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGTGACCTGGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGGAGATGAAATCTGGAGCGGGGCCTaGAGGAGATGTGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GDLEADVNVGGNGTVGDEIWSGA*RRCEVC
Trigger: ACAGACTTCACATCTCCTCCAGGCCCCGCTCCAGAT...TTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp GGAAGGAAGAACCCCAGAATGACCTTCAGGGTCAAGACAGCTGACTTCAGTTTGCCTGGGCTAAGGTCCTaGAAGGAGATGGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRKNPRMTFRVKTADFSLPGLRS*KEMDSW
Trigger: CCAGGAATCCATCTCCTTCCAGGACCTTAGCCCAGG...CAAACTGAAGTCAGCTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGAGACACCAAGGCACCCACGATaGACACGAGCCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: HRRQWSAPTKCSCRETETPRHPR*TRASTR
Trigger: CCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTGG...TGTCTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCCAGGGTCAAGACAGCTaGCTTCAGTTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAQGQDS*LQFGAL
Trigger: GAGAGCACCAAACTGAAGTCAGCTGTCTTGACCCTG...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAGACGGTCAGGACAGTaGTGGTCACTTTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNRRSGQ*WSLLGL
Trigger: AAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGAGACACCCACTGGGCCTGGCTaGTGCAACCCAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRRQWSAPTKCSCRETETPTGPG*CNPSSS
Trigger: TGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGG...TGTCTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp TTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGGGTGAGGGAGAGTGCTCCTaGGGTTGTCTCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: FSRDPGGISHPQKHREQGEGECS*GCLQQH
Trigger: ATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTC...ACCCTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCCTCCCTCCAAGTATGTaGTCTCATGGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTALPPSM*SHGLGN
Trigger: ATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAG...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACACTTCCAAAAGAACCATaGACCTCAGAGAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATLPKEP*TSEKTP
Trigger: AGGGGTCTTCTCTGAGGTGCATGGTTCTTTTGGAAG...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCTGTAGCAGCAGCCAGTaGTTCTGTGTCCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTACSSSQ*FCVPFW
Trigger: CCAAAAGGGGACACAGAAGCACTGGCTGCTGCTACA...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATTTTGCCCTACCTGGCTaGTGCCCATATCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNFALPG*CPYLLT
Trigger: AGTGAGCAGATATGGGCAGCAGCCAGGTAGGGCAAA...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACCTTCCATGGAAGATGTaGATTCAGAGCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHLPWKM*IQSHSH
Trigger: ATGACTATGGCTCTGAATCCACATCTTCCATGGAAG...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGAAGGGTGGGAGGAAATaGCTCGCAAACTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVKGGRK*LANCLT
Trigger: TGTCAGGCAGTTTGCGAGCCATTTCCTCCCACCCTT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp ATCTTGTACATGCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: ILYMLLTTLHMKVWNFHWVWNFH*SAAAMA
Trigger: GGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGAC...CCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCATGTACAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTTGTGCTCTCATGGCCTaGGCAATGGCAATGTACCTG +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVCALMA*AMAMYL
Trigger: CAGGTACATTGCCATTGCCCAGGCCATGAGAGCACA...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAAGATGTCAATGTTGGTaGAAACGGCACAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIRCQCW*KRHSWR
Trigger: TCTCCAACTGTGCCGTTTCCACCAACATTGACATCT...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGAAGAAGGCGATGGTCTaGGTGACCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVKKAMV*VTWKQM
Trigger: CATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCTGTCCAGGGGTTCACTaGCAAGACCTGCAGATCGTT +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTACPGVH*QDLQIV
Trigger: AACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACA...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACGACACAGAAATGGATTaGAAGCCAACAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHDTEMD*KPTDFG
Trigger: TCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTC...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp CACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCAATGGCCCATGCCGGATTCCTCCTTaGTTTGGCTGTATAAGATTT +
Preference number: 4 (lower is better)
Translates to: HLAHEGLELPLVSSSNGPCRIPP*FGCIRF
Trigger: AAATCTTATACAGCCAAATCAAGGAGGAATCCGGCA...TGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTTATAGCAGCAAGCCATaGCCACGAAGGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVYSSKP*PRREGR
Trigger: TCTTCCTTCCCTTCGTGGTCATGGCTTGCTGCTATA...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp GCAGCTGCCAATACCCAGATGGTAAAGCAAACCATTTTGCTGTACAAAAGCCTTGGCCTGGAGGAGATGTaGAGTCTGTGGGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: AAANTQMVKQTILLYKSLGLEEM*SLWVSW
Trigger: CCATGACACCCACAGACTTCACATCTCCTCCAGGCC...AAGGCTTTTGTACAGCAAAATGGTTTGCTTTACCATCTGGGTATTGGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp ATCTTGTACATGCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGCTCCCTCCAAGTATGTaGTCTCATGGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ILYMLLTTLHMKVWNFHWLPPSM*SHGLGN
Trigger: ATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAG...CCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCATGTACAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATCTTCCAAAAGAACCATaGACCTCAGAGAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNLPKEP*TSEKTP
Trigger: AGGGGTCTTCTCTGAGGTGCATGGTTCTTTTGGAAG...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATATTCACTGGCAAGACCTaGAGATCGTTTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIFTGKT*RSFQNQ
Trigger: CTGATTTTGAAACGATCTGCAGGTCTTGCCAGTGAA...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATCCAACAGACTTTGGATaGCTTGTGGGTGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNPTDFG*LVGVVS
Trigger: ACTGACCACACCCACAAGGCATCCAAAGTCTGTTGG...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AGAAAGAGGAGGTCAGCAATTGCCAAATTCAAAAGGAACATGTCGGTCATGGTCTGCAAGCCTGCTCTGTaGAGGGCGATGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: RKRRSAIAKFKRNMSVMVCKPAL*RAMQLS
Trigger: GGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGCA...GACCATGACCGACATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGAGTCTGTGGGTGTCATaGTGGGTCAGTCAGATGCAA +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVSLWVS*WVSQMQ
Trigger: TTGCATCTGACTGACCCACCATGACACCCACAGACT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357632.7
CDS-3UTR CCA 90 bp TTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGCAATGTACCTGTAGTCTGTGGGTGTCATaGTGGGTCAGTCAGATGCAA +
Preference number: 4 (lower is better)
Translates to: FSPSKYVLSWPGQWQCTCSLWVS*WVSQMQ
Trigger: TTGCATCTGACTGACCCACCATGACACCCACAGACT...ACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCAATGGCCCACTTCCATGGAAGATGTaGATTCAGAGCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: HLAHEGLELPLVSSSNGPLPWKM*IQSHSH
Trigger: ATGACTATGGCTCTGAATCCACATCTTCCATGGAAG...TGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATGTGCTCTCATGGCCTaGGCAATGGCAATGTACCTG +
Preference number: 4 (lower is better)
Translates to: CYNLPAQAMERHCHHTKECALMA*AMAMYL
Trigger: CAGGTACATTGCCATTGCCCAGGCCATGAGAGCACA...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCCTGGGCAATGGCAATGTACCTGTCCACGCTGATGCACATGATCAGCAACACAAGATGTCAATGTTGGTaGAAACGGCACAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AWAMAMYLSTLMHMISNTRCQCW*KRHSWR
Trigger: TCTCCAACTGTGCCGTTTCCACCAACATTGACATCT...TGTGTTGCTGATCATGTGCATCAGCGTGGACAGGTACATTGCCATTGCCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAGCAGATGTCAATGTTaGTGGAAACGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNSRCQC*WKRHSW
Trigger: CCAACTGTGCCGTTTCCACCAACATTGACATCTGCT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp ACATGGCATAGGCGTCAATGGTCTGCACCAACAAAATGCAGTTGTAGGGAAACTGGGTTCAGGCAACTGTaGAAGAAGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TWHRRQWSAPTKCSCRETGFRQL*KKAMVW
Trigger: CCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCC...AGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGACGCCTATGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCGGGAAAGAGCTGGGTTaGTCTCTGCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFGKELG*SLPGMR
Trigger: CCTCATCCCAGGCAGAGAGCAACCCAGCTCTTTCCC...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAGGTCTGGAACTTCCACTGGTCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTGGAGGAGGTCAGCAATTaGCAAATTCAAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: KVWNFHWSAAAMAQKGRVEEVSN*QIQKEH
Trigger: ATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTC...CACTCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGATGCAGAGAGCAGCTaGCAATACCCAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVDAESS*QYPDGK
Trigger: TTTACCATCTGGGTATTGGCAGCTGCTCTCTGCATC...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GGTGACCTGGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGGAGATGAAGATGCAGAGAGCAGCTaGCAATACCCAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: GDLEADVNVGGNGTVGDEDAESS*QYPDGK
Trigger: TTTACCATCTGGGTATTGGCAGCTGCTCTCTGCATC...TTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAACTTTTAGGGCTTTGTaGTTGGAAGACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATTFRAL*LEDFLA
Trigger: AGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGT...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACATCTGCACCAACAAAATaGAGTTGTAGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: ASASVSPFGRGSMRTEATSAPTK*SCRETE
Trigger: CTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGA...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGTCCTCCTTTGAGAATTaGGGGCATCACAGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVSSFEN*GHHSQE
Trigger: CTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGA...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGACAGGGTGCTCCACAGTaGCGGTCCTTAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRQGAPQ*RSLVLL
Trigger: AAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTG...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp ACAGTGATGGTCACTTTTAGGGCTTTGTGCTTGGAAGACTTCTTGGCTTGTATCCTGTGGGTGTCATGGTaGGTCAGTCAGATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TVMVTFRALCLEDFLACILWVSW*VSQMQA
Trigger: GGCTTGCATCTGACTGACCCACCATGACACCCACAG...GATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGACCATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGGGAACATGTCGGTCATaGTCTTCACTCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWGTCRS*SSLLCS
Trigger: ACTGCACAAGAGTGAAGACCATGACCGACATGTTCC...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATGGAACATGTCGGTCATaGTCTTCACTCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNGTCRS*SSLLCS
Trigger: ACTGCACAAGAGTGAAGACCATGACCGACATGTTCC...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGGTTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGGGAACATGTCGGTCATaGTCTTCACTCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GFSRDPGGISHPQKHREQGTCRS*SSLLCS
Trigger: ACTGCACAAGAGTGAAGACCATGACCGACATGTTCC...CTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATAAGTATGTGCTCTCATaGCCTGGGCAATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNKYVLS*PGQWQC
Trigger: ACATTGCCATTGCCCAGGCCATGAGAGCACATACTT...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TTGCTGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAAAGTATGTGCTCTCATaGCCTGGGCAATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: LLYKSLFSLQVCALMAWAKYVLS*PGQWQC
Trigger: ACATTGCCATTGCCCAGGCCATGAGAGCACATACTT...TGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp GGGTTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGTGGCATAGGCGTCAATaGTCTGCACCAACAAAATGC +
Preference number: 4 (lower is better)
Translates to: GFSRDPGGISHPQKHREQWHRRQ*SAPTKC
Trigger: GCATTTTGTTGGTGCAGACCATTGACGCCTATGCCA...CTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAGATGTCAATGTTGGTaGAAACGGCACAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNRCQCW*KRHSWR
Trigger: TCTCCAACTGTGCCGTTTCCACCAACATTGACATCT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGAGCAGATGTCAATGTTaGTGGAAACGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWSRCQC*WKRHSW
Trigger: CCAACTGTGCCGTTTCCACCAACATTGACATCTGCT...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GGGTTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGAGCAGATGTCAATGTTaGTGGAAACGGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFSRDPGGISHPQKHREQSRCQC*WKRHSW
Trigger: CCAACTGTGCCGTTTCCACCAACATTGACATCTGCT...CTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGATGGTCTGGGTGACCTaGAAGCAGATGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVMVWVT*KQMSML
Trigger: CAACATTGACATCTGCTTCCAGGTCACCCAGACCAT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTATGGTCTGGGTGACCTaGAAGCAGATGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVMVWVT*KQMSML
Trigger: CAACATTGACATCTGCTTCCAGGTCACCCAGACCAT...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TTGCTGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGTCTGGGTGACCTaGAAGCAGATGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: LLYKSLFSLQVCALMAWAMVWVT*KQMSML
Trigger: CAACATTGACATCTGCTTCCAGGTCACCCAGACCAT...TGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
3UTR CAA 72 bp AAGACGGTCAGGACAGTGATGGTCACTTTTAGGGCTTaGTGCTTGGAAGACTTCTTGGCTTGTATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KTVRTVMVTFRA*CLEDFLACIRV
Trigger: CACCCTGATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGACCATCACTGTCCTGACCGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATTGCCGGATTCCTCCTTaGTTTGGCTGTATAAGATTT +
Preference number: 4 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNCRIPP*FGCIRF
Trigger: AAATCTTATACAGCCAAATCAAGGAGGAATCCGGCA...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGAGAGGGAGAGTGCTCCTaGGGTTGTCTCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSREGECS*GCLQQH
Trigger: ATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTC...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTTGGTCTTCACTCTTGTaGAGTACCAGTAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVWSSLL*STSRQG
Trigger: TCCTTGTCTACTGGTACTGCACAAGAGTGAAGACCA...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCCCAGCTCTCAGTGTCTaGGGAAAGAGCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFPALSV*GKSWVA
Trigger: AGCAACCCAGCTCTTTCCCCAGACACTGAGAGCTGG...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TCACTTTTAGGGCTTTGTGCTTGGAAGACTTCTTGGCTTGTATCAGGGTGTGAATGTGCTCTCATGGCCTaGGCAATGGCAATGTACCTG +
Preference number: 4 (lower is better)
Translates to: SLLGLCAWKTSWLVSGCECALMA*AMAMYL
Trigger: CAGGTACATTGCCATTGCCCAGGCCATGAGAGCACA...TTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp AGAAAGAGGAGGTCAGCAATTGCCAAATTCAAAAGGAACATGTCGGTCATGGTCAAGAAGGCGATGGTCTaGGTGACCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RKRRSAIAKFKRNMSVMVKKAMV*VTWKQM
Trigger: CATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTT...GACCATGACCGACATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR TCA 90 bp TCACTTTTAGGGCTTTGTGCTTGGAAGACTTCTTGGCTTGTATCAGGGTGTGAATATAGCAGCAAGCCATaGCCACGAAGGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLLGLCAWKTSWLVSGCEYSSKP*PRREGR
Trigger: TCTTCCTTCCCTTCGTGGTCATGGCTTGCTGCTATA...TTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGACTCCCTCCAAGTATGTaGTCTCATGGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRLPPSM*SHGLGN
Trigger: ATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAG...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGATAAGATTTCTGGGATaGAGAGAGCAGCTGCCAATA +
Preference number: 4 (lower is better)
Translates to: CTKAFSPSKYVLSWPGQWIRFLG*REQLPI
Trigger: TATTGGCAGCTGCTCTCTGCATCCCAGAAATCTTAT...CCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCTGTAGCAGCAGCCAGTaGTTCTGTGTCCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFCSSSQ*FCVPFW
Trigger: CCAAAAGGGGACACAGAAGCACTGGCTGCTGCTACA...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATCTTCCATGGAAGATGTaGATTCAGAGCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNLPWKM*IQSHSH
Trigger: ATGACTATGGCTCTGAATCCACATCTTCCATGGAAG...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCGTCTGGAACTTCCACTaGTCAGCAGCAGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSVWNFH*SAAAMA
Trigger: GGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGAC...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAGCTTGGAAGACTTCTTaGCTTGTATCAGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: CYNLPAQAMERHCHHTKEAWKTS*LVSGCE
Trigger: TTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGC...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCGGGTTCAGGCAACTGTaGAAGAAGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSGFRQL*KKAMVW
Trigger: CCAGACCATCGCCTTCTTCCACAGTTGCCTGAACCC...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAACTCTGGTCCCATCAGTaGGGAAACTGTTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: CYNLPAQAMERHCHHTKELWSHQ*GNCFCI
Trigger: AATACAGAAACAGTTTCCCCACTGATGGGACCAGAG...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCTGTCCAGGGGTTCACTaGCAAGACCTGCAGATCGTT +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFCPGVH*QDLQIV
Trigger: AACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACA...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATCCCTGCTCAGGCCATaGAGAGACACTGTCACCATA +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRSLLRP*RDTVTI
Trigger: TATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATATAGCAGCAAGCCATaGCCACGAAGGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRYSSKP*PRREGR
Trigger: TCTTCCTTCCCTTCGTGGTCATGGCTTGCTGCTATA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCTCCTTAGTCCTCCTTTaGGAATTGCGGGCATCACAG +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFSLVLL*ELRASQ
Trigger: CTGTGATGCCCGCAATTCTCAAAGGAGGACTAAGGA...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCAAATGGCTCGCAAACTaGCTGACATTGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAKWLAN*LTLFFS
Trigger: TGAGAAAAACAATGTCAGGCAGTTTGCGAGCCATTT...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGAGGAGGTCAGCAATTaGCAAATTCAAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAEEVSN*QIQKEH
Trigger: ATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAAACTTTTAGGGCTTTGTaGTTGGAAGACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CYNLPAQAMERHCHHTKETFRAL*LEDFLA
Trigger: AGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGT...TTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGACCAACAGACTTTGGATaGCTTGTGGGTGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRPTDFG*LVGVVS
Trigger: ACTGACCACACCCACAAGGCATCCAAAGTCTGTTGG...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATGGACCCAAAGCAAGTaGCACTCAACAGAACAAGCC +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRWTQSK*HSTEQA
Trigger: GGCTTGTTCTGTTGAGTGGCACTTGCTTTGGGTCCA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCGAGCCAGTACAAGGGTaGGAGGAAATGGCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSEPVQG*EEMARK
Trigger: TTTGCGAGCCATTTCCTCCCACCCTTGTACTGGCTC...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGGGTAAATGGCTCGCAAACTaGCTGACATTGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FSRDPGGISHPQKHREQGKWLAN*LTLFFS
Trigger: TGAGAAAAACAATGTCAGGCAGTTTGCGAGCCATTT...ACCCTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp GCAGCTGCCAATACCCAGATGGTAAAGCAAACCATTTTGCTGTACAAAAGCCTTTGGTCTTCACTCTTGTaGAGTACCAGTAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: AAANTQMVKQTILLYKSLWSSLL*STSRQG
Trigger: TCCTTGTCTACTGGTACTGCACAAGAGTGAAGACCA...AAGGCTTTTGTACAGCAAAATGGTTTGCTTTACCATCTGGGTATTGGCAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGAGATGCAGAGAGCAGCTaGCAATACCCAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRDAESS*QYPDGK
Trigger: TTTACCATCTGGGTATTGGCAGCTGCTCTCTGCATC...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AGAAAGAGGAGGTCAGCAATTGCCAAATTCAAAAGGAACATGTCGGTCATGGTCGCTTGGAAGACTTCTTaGCTTGTATCAGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RKRRSAIAKFKRNMSVMVAWKTS*LVSGCE
Trigger: TTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGC...GACCATGACCGACATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCCTCTTTCACTCTCTCTaGTCCCATCAGTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSLFHSL*SHQWGN
Trigger: GTTTCCCCACTGATGGGACCAGAGAGAGTGAAAGAG...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCGAAGCCAACAGACTTTaGATGCCTTGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSEANRL*MPCGCG
Trigger: ACCACACCCACAAGGCATCCAAAGTCTGTTGGCTTC...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TCACTTTTAGGGCTTTGTGCTTGGAAGACTTCTTGGCTTGTATCAGGGTGTGAAACTTTTAGGGCTTTGTaGTTGGAAGACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLGLCAWKTSWLVSGCETFRAL*LEDFLA
Trigger: AGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGT...TTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCTTCCTCAGAATAAAGTaGGCCTCAGAAAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFFLRIK*ASERRG
Trigger: CCCTCTTCTTTCTGAGGCCCACTTTATTCTGAGGAA...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR TCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCTGCCGGATTCCTCCTTaGTTTGGCTGTATAAGATTT +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFCRIPP*FGCIRF
Trigger: AAATCTTATACAGCCAAATCAAGGAGGAATCCGGCA...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCATAAGATTTCTGGGATaGAGAGAGCAGCTGCCAATA +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFIRFLG*REQLPI
Trigger: TATTGGCAGCTGCTCTCTGCATCCCAGAAATCTTAT...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGAATAAGATTTCTGGGATaGAGAGAGCAGCTGCCAATA +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRIRFLG*REQLPI
Trigger: TATTGGCAGCTGCTCTCTGCATCCCAGAAATCTTAT...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATCTGCACCAACAAAATaGAGTTGTAGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRSAPTK*SCRETE
Trigger: CTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATTCACTGGCAAGACCTaGAGATCGTTTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRFTGKT*RSFQNQ
Trigger: CTGATTTTGAAACGATCTGCAGGTCTTGCCAGTGAA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CCA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCCTCTGGTCCCATCAGTaGGGAAACTGTTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSLWSHQ*GNCFCI
Trigger: AATACAGAAACAGTTTCCCCACTGATGGGACCAGAG...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR GCA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCGAGGAGGTCAGCAATTaGCAAATTCAAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFEEVSN*QIQKEH
Trigger: ATGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTC...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS TCA 90 bp CTAAGGTCCTGGAAGGAGATGGATTCCTGGGCCAGCGAGGGAAGGTaGTCTGGAGCGGGGCCTGGAGGAGATGTGAAGTCTGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LRSWKEMDSWASEGR*SGAGPGGDVKSVGV
Trigger: GACACCCACAGACTTCACATCTCCTCCAGGCCCCGCTCCAGATCACCTTCCCTCGCTGGCCCAGGAATCCATCTCCTTCCAGGACCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS CCA 90 bp CAGTCAGATGCAAGCCTGCTCTGTGGAGGGCGATGCAACTCTCCCTaGGACAGCAGGCACCACCAGCTCTCAGTGTCTGGGGAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: QSDASLLCGGRCNSP*DSRHHQLSVSGERA
Trigger: AGCTCTTTCCCCAGACACTGAGAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGCATCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000422395.1
ENST00000463197.1
CDS CCA 90 bp GTCCTGGAAGGAGATGGATTCCTGGGCCAGCGAGGGAAGGTGATCTaGAGCGGGGCCTGGAGGAGATGTGAAGTCTGTGGGTGTCATGGT +
Preference number: 5 (lower is better)
Translates to: VLEGDGFLGQRGKVI*SGAWRRCEVCGCHG
Trigger: ACCATGACACCCACAGACTTCACATCTCCTCCAGGCCCCGCTCCAGATCACCTTCCCTCGCTGGCCCAGGAATCCATCTCCTTCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAACAGCTGACTTCAGTTaGGTGCTCTCATCGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTTADFS*VLSSLG
Trigger: CCCTAGCGATGAGAGCACCAAACTGAAGTCAGCTGT...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp CCAGAGGCAGCGGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACACAGACTTTGGATGCCTaGTGGGTGTGGTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: PEAAALMLRRVAKPGCSTQTLDA*WVWSVV
Trigger: GACAACTGACCACACCCACAAGGCATCCAAAGTCTG...TGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTATGCTGTTGACCACCTaGCACATGAAGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GIDAPASGKARVLHSAGPMLLTT*HMKVWN
Trigger: GTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCAT...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS CCA 90 bp AGCCATGTTAGGAATAGGGCTTGTGGAGGGCGATGCAACTCTCCCTaGGACAGCAGGCACCACCAGCTCTCAGTGTCTGGGGAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SHVRNRACGGRCNSP*DSRHHQLSVSGERA
Trigger: AGCTCTTTCCCCAGACACTGAGAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAAGCCCTATTCCTAACATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395963.2
CDS-3UTR CAA 90 bp CAGAACAAGCCTACAACAGGGCCAAGGCTGGCTCCTGCGAACCCAGCTGTTATAGATGAGGGGCAGGCTTaGTGGGTTCTGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QNKPTTGPRLAPANPAVIDEGQA*WVLSRQ
Trigger: CTGCCTGCTCAGAACCCACAAAGCCTGCCCCTCATC...TATAACAGCTGGGTTCGCAGGAGCCAGCCTTGGCCCTGTTGTAGGCTTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395963.2
CDS-3UTR CAA 90 bp GGCATTGATGCTCCGGCGAGTGGCAAAGCCAGGGTGCTCCACAGTGCCGGTCCTTTTAGGGCTTTGTGCTaGGAAGACTTCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: GIDAPASGKARVLHSAGPFRALC*EDFLAC
Trigger: ACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAA...AGGACCGGCACTGTGGAGCACCCTGGCTTTGCCACTCGCCGGAGCATCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGCCAGAGGCAGCGGCATaGATGCTCCGGCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWPEAAA*MLRRVA
Trigger: TGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS TCA 90 bp AGAACCATGCACCTCAGAGAAGACCCCTCAGAGGGAGAGTGCTCCTaGGGTTGTCTCCAGCAACATAGACGACAGCTTCAAGCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: RTMHLREDPSEGECS*GCLQQHRRQLQASL
Trigger: GAGGGAAGCTTGAAGCTGTCGTCTATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTCTGAGGGGTCTTCTCTGAGGTGCATGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAAGGATAACAAGACTGTaGCCCAAGGCACCCACGATG +
Preference number: 5 (lower is better)
Translates to: ASASVSPFGRGSMRTEATRITRL*PKAPTM
Trigger: CATCGTGGGTGCCTTGGGCAACAGTCTTGTTATCCT...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp AAGCCAGGGTGCTCCACAGTGCCGGTCCTTAGTCCTCCTTTGAGAATTGCGGGCGTCACTTTTAGGGCTTaGTGCTTGGAAGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: KPGCSTVPVLSPPLRIAGVTFRA*CLEDFL
Trigger: CAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGAC...GCCCGCAATTCTCAAAGGAGGACTAAGGACCGGCACTGTGGAGCACCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACACGAAACTTTCTGCTTTaGCGGTCTGTAGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASASVSPFGRGSMRTEATRNFLL*RSVAAA
Trigger: GGCTGCTGCTACAGACCGCAAAAGCAGAAAGTTTCG...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GGCTCCTGCGAACCCAGCTGTTATAATCTCCCTGCTCAGGCCATGGAGAGACACGGACACAGAAATGGATaGGAAGCCAACAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: GSCEPSCYNLPAQAMERHGHRNG*EANRLW
Trigger: CCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCC...GTGTCTCTCCATGGCCTGAGCAGGGAGATTATAACAGCTGGGTTCGCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS CCA 90 bp ACTGTTGCCCAAGGCACCCACGATGAACACGAGCCAGTACAAGGGTaGGAGGAAATGGCTCGCAAACTGCCTGACATTGTTTTTCTCACA +
Preference number: 5 (lower is better)
Translates to: TVAQGTHDEHEPVQG*EEMARKLPDIVFLT
Trigger: TGTGAGAAAAACAATGTCAGGCAGTTTGCGAGCCATTTCCTCCCACCCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTGGGCAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000395963.2
ENST00000422395.1
CDS-3UTR CAA 90 bp GCTGTTGACCACCTTGCACATGAAGGTCTGGAACTTCCACTGGTCAGCAGCAGCAAGCAGATGTCAATGTaGGTGGAAACGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: AVDHLAHEGLELPLVSSSKQMSM*VETAQL
Trigger: CAACTGTGCCGTTTCCACCAACATTGACATCTGCTT...GCTGCTGCTGACCAGTGGAAGTTCCAGACCTTCATGTGCAAGGTGGTCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATAGGATAACAAGACTGTaGCCCAAGGCACCCACGATG +
Preference number: 5 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNRITRL*PKAPTM
Trigger: CATCGTGGGTGCCTTGGGCAACAGTCTTGTTATCCT...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GGGTTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGAGGATAACAAGACTGTaGCCCAAGGCACCCACGATG +
Preference number: 5 (lower is better)
Translates to: GFSRDPGGISHPQKHREQRITRL*PKAPTM
Trigger: CATCGTGGGTGCCTTGGGCAACAGTCTTGTTATCCT...CTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp GGAAGGAAGAACCCCAGAATGACCTTCAGGGTCAAGACAGCTGACTTCAGTTTGACAGCTGACTTCAGTTaGGTGCTCTCATCGCTAGGG +
Preference number: 5 (lower is better)
Translates to: GRKNPRMTFRVKTADFSLTADFS*VLSSLG
Trigger: CCCTAGCGATGAGAGCACCAAACTGAAGTCAGCTGT...CAAACTGAAGTCAGCTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCCCAGAGGCAGCGGCATaGATGCTCCGGCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSPEAAA*MLRRVA
Trigger: TGCCACTCGCCGGAGCATCAATGCCGCTGCCTCTGG...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GTGTGGTCAGTTGTCCAGGGGTTCACTGGCAAGACCTGCAGATCGTTTCAAAATCGAAACTTTCTGCTTTaGCGGTCTGTAGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VWSVVQGFTGKTCRSFQNRNFLL*RSVAAA
Trigger: GGCTGCTGCTACAGACCGCAAAAGCAGAAAGTTTCG...ATTTTGAAACGATCTGCAGGTCTTGCCAGTGAACCCCTGGACAACTGACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAATGGATGCTGTTGACCACCTaGCACATGAAGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: CTKAFSPSKYVLSWPGQWMLLTT*HMKVWN
Trigger: GTTCCAGACCTTCATGTGCAAGGTGGTCAACAGCAT...CCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAAGAGGAGGTCAGCAATaGCCAAATTCAAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: ASASVSPFGRGSMRTEATRGGQQ*PNSKGT
Trigger: TGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCT...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGAAGCAGATGTCAATGTaGGTGGAAACGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWKQMSM*VETAQL
Trigger: CAACTGTGCCGTTTCCACCAACATTGACATCTGCTT...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGAAGTTAAGCAGATGTCAATGTaGGTGGAAACGGCACAGTTG +
Preference number: 5 (lower is better)
Translates to: ASVSPFGRGSMRTEATEVKQMSM*VETAQL
Trigger: CAACTGTGCCGTTTCCACCAACATTGACATCTGCTT...AACTTCTGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp AAAGGTTCTAGATCAGGAATCTATAAGACCTGGCATGGGTTATCAGGCTCAAGATGTGGGTGTGGTCAGTaGTCCAGGGGTTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KGSRSGIYKTWHGLSGSRCGCGQ*SRGSLA
Trigger: TGCCAGTGAACCCCTGGACAACTGACCACACCCACA...TCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATCTAGAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGGACACAGAAATGGATaGGAAGCCAACAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAGHRNG*EANRLW
Trigger: CCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TCCCTGCTCAGGCCATGGAGAGACACTGTCACCATACCAAGGAATAAGCGGAATAGAGGAGGTCAGCAATaGCCAAATTCAAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: SLLRPWRDTVTIPRNKRNRGGQQ*PNSKGT
Trigger: TGTTCCTTTTGAATTTGGCAATTGCTGACCTCCTCT...ATTCCGCTTATTCCTTGGTATGGTGACAGTGTCTCTCCATGGCCTGAGCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCTTTAGGGCTTTGTGCTaGGAAGACTTCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAFRALC*EDFLAC
Trigger: ACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAA...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GGTGACCTGGAAGCAGATGTCAATGTTGGTGGAAACGGCACAGTTGGAGATGAATTTAGGGCTTTGTGCTaGGAAGACTTCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: GDLEADVNVGGNGTVGDEFRALC*EDFLAC
Trigger: ACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAA...TTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp TTGCTGTACAAAAGCCTTTTCTCCCTCCAAGTATGTGCTCTCATGGCCTGGGCAGTCACTTTTAGGGCTTaGTGCTTGGAAGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLYKSLFSLQVCALMAWAVTFRA*CLEDFL
Trigger: CAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGAC...TGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGTACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp AATTTCCCAAAGATGGACATTTTCACGAAACTTTCTGCTTTTGCGGTCTGTAGCTGTGGGTGTGGTCAGTaGTCCAGGGGTTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: NFPKMDIFTKLSAFAVCSCGCGQ*SRGSLA
Trigger: TGCCAGTGAACCCCTGGACAACTGACCACACCCACA...GCTACAGACCGCAAAAGCAGAAAGTTTCGTGAAAATGTCCATCTTTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp GCCAGTGCTTCTGTGTCCCCTTTTGGAAGAGGCAGCATGAGAACTGAAGCCACAGTAAAGCAAACCATTTaGCTGTACAAAAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ASASVSPFGRGSMRTEATVKQTI*LYKSLF
Trigger: GAAAAGGCTTTTGTACAGCAAAATGGTTTGCTTTAC...TGTGGCTTCAGTTCTCATGCTGCCTCTTCCAAAAGGGGACACAGAAGCACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TTCAGGCAACTGTGGAAGAAGGCGATGGTCTGGGTGACCTGGAAGCAGATGTCAGTAAAGCAAACCATTTaGCTGTACAAAAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FRQLWKKAMVWVTWKQMSVKQTI*LYKSLF
Trigger: GAAAAGGCTTTTGTACAGCAAAATGGTTTGCTTTAC...TGACATCTGCTTCCAGGTCACCCAGACCATCGCCTTCTTCCACAGTTGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp TCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGGATGCCGGATTCCTCCTaGATTTGGCTGTATAAGATT +
Preference number: 5 (lower is better)
Translates to: SSRTQKWIGSQQTLDALWMPDSS*IWLYKI
Trigger: AATCTTATACAGCCAAATCAAGGAGGAATCCGGCAT...CCACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp CTCCAGCAGGACACAGAAATGGATTGGAAGCCAACAGACTTTGGATGCCTTGTGATGCCGGATTCCTCCTaGATTTGGCTGTATAAGATT +
Preference number: 5 (lower is better)
Translates to: LQQDTEMDWKPTDFGCLVMPDSS*IWLYKI
Trigger: AATCTTATACAGCCAAATCAAGGAGGAATCCGGCAT...CACAAGGCATCCAAAGTCTGTTGGCTTCCAATCCATTTCTGTGTCCTGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCACAGCTGACTTCAGTTaGGTGCTCTCATCGCTAGGG +
Preference number: 5 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFTADFS*VLSSLG
Trigger: CCCTAGCGATGAGAGCACCAAACTGAAGTCAGCTGT...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TTTTCACGAGATCCCGGCGGAATCTCTCACCCACAAAAACATAGAGAACAGGGTATGCCGGATTCCTCCTaGATTTGGCTGTATAAGATT +
Preference number: 5 (lower is better)
Translates to: FSRDPGGISHPQKHREQGMPDSS*IWLYKI
Trigger: AATCTTATACAGCCAAATCAAGGAGGAATCCGGCAT...ACCCTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGATCTCGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS-3UTR CAA 90 bp CTTAGTCCTCCTTTGAGAATTGCGGGCATCACAGTCAAGAGCCAATCAACAGCCGTAAAGCAAACCATTTaGCTGTACAAAAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSPPLRIAGITVKSQSTAVKQTI*LYKSLF
Trigger: GAAAAGGCTTTTGTACAGCAAAATGGTTTGCTTTAC...GGCTGTTGATTGGCTCTTGACTGTGATGCCCGCAATTCTCAAAGGAGGACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS-3UTR CAA 90 bp TTTCACTCTCTCTGGTCCCATCAGTGGGGAAACTGTTTCTGTATTTCTCATTTCGTCACTTTTAGGGCTTaGTGCTTGGAAGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: FHSLWSHQWGNCFCISHFVTFRA*CLEDFL
Trigger: CAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGAC...GAAATGAGAAATACAGAAACAGTTTCCCCACTGATGGGACCAGAGAGAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS CCA 72 bp GCAAGCCTGCTCTGTGGAGGGCGATGCAACTCTCCCTaGGACAGCAGGCACCACCAGCTCTCAGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASLLCGGRCNSP*DSRHHQLSVSG
Trigger: CCCAGACACTGAGAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000422395.1
ENST00000463197.1
CDS GCA 72 bp GGTCAGTCAGATGCAAGCCTGCTCTGTGGAGGGCGATaGAACTCTCCCTGGGACAGCAGGCACCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: GQSDASLLCGGR*NSPWDSRHHQL
Trigger: GAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGCATCTGACTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000422395.1
ENST00000463197.1
CDS CCA 72 bp GGAGATGGATTCCTGGGCCAGCGAGGGAAGGTGATCTaGAGCGGGGCCTGGAGGAGATGTGAAGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GDGFLGQRGKVI*SGAWRRCEVCG
Trigger: CCCACAGACTTCACATCTCCTCCAGGCCCCGCTCCAGATCACCTTCCCTCGCTGGCCCAGGAATCCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS TCA 72 bp GTCTGGGGAAAGAGCTGGGTTGCTCTCTGCCTGGGATaGGGGGCAGGCTTTGTGGGTTCTGAGCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: VWGKSWVALCLG*GAGFVGSEQAA
Trigger: AGCTGCCTGCTCAGAACCCACAAAGCCTGCCCCTCATCCCAGGCAGAGAGCAACCCAGCTCTTTCCCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395963.2
ENST00000463197.1
CDS CCA 72 bp AGGAATAGGGCTTGTGGAGGGCGATGCAACTCTCCCTaGGACAGCAGGCACCACCAGCTCTCAGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: RNRACGGRCNSP*DSRHHQLSVSG
Trigger: CCCAGACACTGAGAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAAGCCCTATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395963.2
CDS GCA 72 bp ATCAGCCATGTTAGGAATAGGGCTTGTGGAGGGCGATaGAACTCTCCCTGGGACAGCAGGCACCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: ISHVRNRACGGR*NSPWDSRHHQL
Trigger: GAGCTGGTGGTGCCTGCTGTCCCAGGGAGAGTTGCATCGCCCTCCACAAGCCCTATTCCTAACATGGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395963.2
CDS GCA 72 bp TGTGAAGTCTGTGGGTGTCATGGTGGGTCAGTCAGATaGAAGCCTGCTCTGTGGAGGGCGATGCAACTCTCC +
Preference number: 6 (lower is better)
Translates to: CEVCGCHGGSVR*KPALWRAMQLS
Trigger: GGAGAGTTGCATCGCCCTCCACAGAGCAGGCTTGCATCTGACTGACCCACCATGACACCCACAGACTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000422395.1
ENST00000463197.1
CDS CCA 72 bp AGGAATAGGGCTTGTGTTAGTCCTGGGCTAAGGTCCTaGAAGGAGATGGATTCCTGGGCCAGCGAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: RNRACVSPGLRS*KEMDSWASEGR
Trigger: CCTTCCCTCGCTGGCCCAGGAATCCATCTCCTTCCAGGACCTTAGCCCAGGACTAACACAAGCCCTATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422395.1
CDS TCA 72 bp CACCTCAGAGAAGACCCCTCAGAGGGAGAGTGCTCCTaGGGTTGTCTCCAGCAACATAGACGACAGCTTCAA +
Preference number: 6 (lower is better)
Translates to: HLREDPSEGECS*GCLQQHRRQLQ
Trigger: TTGAAGCTGTCGTCTATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTCTGAGGGGTCTTCTCTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357632.7
ENST00000395963.2
CDS CCA 72 bp CAAGGCACCCACGATGAACACGAGCCAGTACAAGGGTaGGAGGAAATGGCTCGCAAACTGCCTGACATTGTT +
Preference number: 6 (lower is better)
Translates to: QGTHDEHEPVQG*EEMARKLPDIV
Trigger: AACAATGTCAGGCAGTTTGCGAGCCATTTCCTCCCACCCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357632.7
ENST00000395963.2
ENST00000422395.1