Pregenerated sensors for CCR8 (Homo sapiens)
Ensembl gene IDs: ENSG00000179934Ensembl transcript IDs: ENST00000326306.5, ENST00000414803.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTaGAAGGAAGTGAGGAAAAGAACCACGTTGAATGGGACCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VSCWLMLHPSKMCIL*KEVRKRTTLNGTQK Trigger: TTTCTGGGTCCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR GCA 90 bp | ACTTGTTCAACATCATCAATAAACACAATCACAGGCTTGATGTTGTaGCAGGCATGCACAACTATGTCTTTAGTCATTGTGTTCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TCSTSSINTITGLML*QACTTMSLVIVFQV Trigger: CACTTGGAACACAATGACTAAAGACATAGTTGTGCATGCCTGGCACAACATCAAGCCTGTGATTGTGTTTATTGATGATGTTGAACAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR-3UTR GCA 90 bp | TTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTGAGGAACGGGAGGAGTaGTGCTGGCAGGATGATGAC | + |
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Preference number: 2 (lower is better) Translates to: FTPTPLLTATSMPFKKMFEEREE*CWQDDD Trigger: GTCATCATCCTGCCAGCAGCACTCCTCCCGTTCCTC...AAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR CAA 90 bp | GACCACAATGAGCACCAACCTGATGGCCTTGGTCTTGTTGTGGTTTaGACACCTCTTCAGCTGGTGCAGGATTTTAATGTAGCAGAACAT | + |
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Preference number: 2 (lower is better) Translates to: DHNEHQPDGLGLVVV*TPLQLVQDFNVAEH Trigger: ATGTTCTGCTACATTAAAATCCTGCACCAGCTGAAGAGGTGTCAAAACCACAACAAGACCAAGGCCATCAGGTTGGTGCTCATTGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTACACAATCACAGGCTTaGTGTTGTGCCAGGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LSHPHLCSLLLACHSRKCTQSQA*CCARHA Trigger: TGCATGCCTGGCACAACATCAAGCCTGTGATTGTGT...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR-3UTR GCA 90 bp | GCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGTGAGGAAAAGTCACACCCACACCTTTaGTCACTGCTACTAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: AYATSIQDVHTVQGSEEKSHPHL*SLLLAC Trigger: GCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA...CTTTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR TCA 90 bp | TCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTTGTCTTGTTGTGGTTTTaGCACCTCTTCAGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SHPHLCSLLLACHSRKCFVLLWF*HLFSWC Trigger: GCACCAGCTGAAGAGGTGTCAAAACCACAACAAGAC...AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCTCACAAAATGTAGTCTACGCTGGAGGAACGGGAGGAGTGCTGCTGGCTCACTGCTACTAGCATaGCATTCAAGAAAATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LILTKCSLRWRNGRSAAGSLLLA*HSRKCF Trigger: AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGA...GCCAGCAGCACTCCTCCCGTTCCTCCAGCGTAGACTACATTTTGTGAGGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR CAA 90 bp | AGTAAAGGAAATGATTTCTGTGACATGGGTGGCATAAGTCAGCTGTaGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKGNDFCDMGGISQL*AYATSIQDVHTVQG Trigger: TCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGACTTATGCCACCCATGTCACAGAAATCATTTCCTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGTCACACCCACACCTTTaGTCACTGCTACTAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SLVIVFQVLATTYMASFMSHPHL*SLLLAC Trigger: GCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA...CATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR-3UTR GCA 90 bp | TTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTAAGATGTGCATACTGTaGAAGGAAGTGAGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: FTPTPLLTATSMPFKKMFKMCIL*KEVRKR Trigger: TCTTTTCCTCACTTCCTTGCACAGTATGCACATCTT...AAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR GCA 90 bp | CATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCTGAACTTTCACTGCTACTAGCATaGCATTCAAGAAAATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: HCVPSVGNNIYGILHAELSLLLA*HSRKCF Trigger: AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGA...AAGTTCAGCATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTGGTCTTGTTGTGGTTTaGACACCTCTTCAGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LSHPHLCSLLLACHSRKCGLVVV*TPLQLV Trigger: CACCAGCTGAAGAGGTGTCAAAACCACAACAAGACC...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR GCA 72 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTaGATACTGTGCAAGGAAGTGAGGAAAAGAACCACG | + |
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Preference number: 3 (lower is better) Translates to: VSCWLMLHPSKM*ILCKEVRKRTT Trigger: CGTGGTTCTTTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR GCA 72 bp | TGGCTTATGCTACATCCATCCAAGATGTGCATACTGTaGAAGGAAGTGAGGAAAAGAACCACGTTGAATGGG | + |
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Preference number: 3 (lower is better) Translates to: WLMLHPSKMCIL*KEVRKRTTLNG Trigger: CCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR CAA 90 bp | TTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTGGCATAAGTCAGCTGTaGGCTTATGCTACATCCATC | + |
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Preference number: 3 (lower is better) Translates to: FTPTPLLTATSMPFKKMFGISQL*AYATSI Trigger: GATGGATGTAGCATAAGCCAACAGCTGACTTATGCC...AAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATTTCACACCCACACCTTaGCTCACTGCTACTAGCATG | + |
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Preference number: 3 (lower is better) Translates to: VFSHCVPSVGNNIYGILHFTPTP*LTATSM Trigger: CATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA...ATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR-3UTR CAA 90 bp | TCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTTAGGAAAAGAACCACGTaGAATGGGACCCAGAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: SHPHLCSLLLACHSRKCFRKRTT*NGTQKS Trigger: ACTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCT...AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAATGTTCATTTTGAAGTaGGTGAAGATCTTCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: VSCWLMLHPSKMCILCKEMFILK*VKIFHF Trigger: GAAGTGGAAGATCTTCACCAACTTCAAAATGAACAT...TTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| 3UTR GCA 72 bp | ACATCATCAATAAACACAATCACAGGCTTGATGTTGTaGCAGGCATGCACAACTATGTCTTTAGTCATTGTG | + |
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Preference number: 3 (lower is better) Translates to: TSSINTITGLML*QACTTMSLVIV Trigger: CACAATGACTAAAGACATAGTTGTGCATGCCTGGCACAACATCAAGCCTGTGATTGTGTTTATTGATGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | GAACGGGAGGAGTGCTGCTGGCAGGATGATGACTTTTCACAGCTCTCCCTAGGCGGAAAAGAACCACGTTaGATGGGACCCAGAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: EREECCWQDDDFSQLSLGGKEPR*MGPRKV Trigger: TACTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCC...GCCTAGGGAGAGCTGTGAAAAGTCATCATCCTGCCAGCAGCACTCCTCCCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGCGTTGTGCCCATCCTaGTCGTCCTCACCTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: VSCWLMLHPSKMCILCKEALCPS*SSSPLG Trigger: CCCTAAAGGTGAGGACGATCAGGATGGGCACAACGC...TTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGAGGAACGGGAGGAGTaGTGCTGGCAGGATGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VSCWLMLHPSKMCILCKEEEREE*CWQDDD Trigger: GTCATCATCCTGCCAGCAGCACTCCTCCCGTTCCTC...TTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTGCGTTGTGCCCATCCTaGTCGTCCTCACCTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LSHPHLCSLLLACHSRKCALCPS*SSSPLG Trigger: CCCTAAAGGTGAGGACGATCAGGATGGGCACAACGC...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR CCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGACGGGAGGAGTGCTGCTaGCAGGATGATGACTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRREECC*QDDDFS Trigger: TGAAAAGTCATCATCCTGCCAGCAGCACTCCTCCCG...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | TTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTGTGAGTGCAGCTCAATaGGCAGCAGCCTCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FTPTPLLTATSMPFKKMFVSAAQ*AAASLE Trigger: CTCCAGAGAGGCTGCTGCTCATTGAGCTGCACTCAC...AAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAGTCTTGTTGTGGTTTTaGCACCTCTTCAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRVLLWF*HLFSWC Trigger: GCACCAGCTGAAGAGGTGTCAAAACCACAACAAGAC...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAGTATCCTCATGTGAGTaGAGCTCAATGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRVSSCE*SSMSSS Trigger: GCTGCTGCTCATTGAGCTGCACTCACATGAGGATAC...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | CATACTGTGCAAGGAAGTGAGGAAAAGAACCACGTTGAATGGGACCCAGAAAAGGAACGGGAGGAGTGCTaGTGGCAGGATGATGACTTT | + |
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Preference number: 4 (lower is better) Translates to: HTVQGSEEKNHVEWDPEKEREEC*WQDDDF Trigger: AAAGTCATCATCCTGCCAGCAGCACTCCTCCCGTTC...CTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTAGTCTACGCTaGAGGAACGGGAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRKCSLR*RNGRSA Trigger: AGCACTCCTCCCGTTCCTCCAGCGTAGACTACATTT...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAGAGGTATACATCTGTaGTGCTCCTCAGCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRRGIHL*CSSASC Trigger: GCAAGAAGCTGAGGAGCATCACAGATGTATACCTCT...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | GTGCCAGGCATGCACAACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACGTCTTGTTGTGGTTTTaGCACCTCTTCAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VPGMHNYVFSHCVPSVGNVLLWF*HLFSWC Trigger: GCACCAGCTGAAGAGGTGTCAAAACCACAACAAGAC...GTTGCCAACACTTGGAACACAATGACTAAAGACATAGTTGTGCATGCCTGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | TCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGTCACACCCACACCTTTaGTCACTGCTACTAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: SAVGLCYIHPRCAYCARKSHPHL*SLLLAC Trigger: GCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA...CTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAGCCAGACACCACTTTaGACATTACAGTCCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRSQTPL*TLQSQT Trigger: TGTTTGGGACTGTAATGTGCAAAGTGGTGTCTGGCT...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGAGGAACGGGAGGAGTaGTGCTGGCAGGATGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VFSHCVPSVGNNIYGILHEEREE*CWQDDD Trigger: GTCATCATCCTGCCAGCAGCACTCCTCCCGTTCCTC...ATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | TCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTTCGCATCACAGGGGCTTaGGAAGATATCAGGGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: SHPHLCSLLLACHSRKCFRITGA*EDIRVV Trigger: TACTACCCTGATATCTTCTCAAGCCCCTGTGATGCG...AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GTGCCAGGCATGCACAACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACGGAAAAGAACCACGTTaGATGGGACCCAGAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: VPGMHNYVFSHCVPSVGNGKEPR*MGPRKV Trigger: TACTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCC...GTTGCCAACACTTGGAACACAATGACTAAAGACATAGTTGTGCATGCCTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | CCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGCTGAGAGGTGTTTCTTaGACTTCTCCCCAACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: PFTPTPLLTATSMPFKKMLRGVS*TSPQQK Trigger: CTTTTGTTGGGGAGAAGTTCAAGAAACACCTCTCAG...CATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GGAAACCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAGTAGGTCATTTGTCTaGATAAGTTCCGCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: GNLSHPHLCSLLLACHSRSRSFV*ISSASQ Trigger: CTGTGATGCGGAACTTATTCAGACAAATGACCTACT...TCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGGTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | CATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCTGAACTTGAACGGGAGGAGTGCTaGTGGCAGGATGATGACTTT | + |
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Preference number: 4 (lower is better) Translates to: HCVPSVGNNIYGILHAELEREEC*WQDDDF Trigger: AAAGTCATCATCCTGCCAGCAGCACTCCTCCCGTTC...AAGTTCAGCATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | CATACTGTGCAAGGAAGTGAGGAAAAGAACCACGTTGAATGGGACCCAGAAAAGTCACTGTTGTCACACTaGGGTCAAGTGTATAATCCA | + |
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Preference number: 4 (lower is better) Translates to: HTVQGSEEKNHVEWDPEKSLLSH*GQVYNP Trigger: TGGATTATACACTTGACCTCAGTGTGACAACAGTGA...CTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GTGCCAGGCATGCACAACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACTGTTTCCCAGAAGACTaGATACAAACAGGAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VPGMHNYVFSHCVPSVGNCFPED*IQTGGN Trigger: ATTGCCTCCTGTTTGTATTCAGTCTTCTGGGAAACA...GTTGCCAACACTTGGAACACAATGACTAAAGACATAGTTGTGCATGCCTGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | GTGCCAGGCATGCACAACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACGTCTTCCTAGGTAGTTaGAGATTTGGCTGCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: VPGMHNYVFSHCVPSVGNVFLGS*RFGCNF Trigger: AAAGTTGCAGCCAAATCTTCAACTACCTAGGAAGAC...GTTGCCAACACTTGGAACACAATGACTAAAGACATAGTTGTGCATGCCTGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | CATACTGTGCAAGGAAGTGAGGAAAAGAACCACGTTGAATGGGACCCAGAAAAGGTCTTCCTAGGTAGTTaGAGATTTGGCTGCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: HTVQGSEEKNHVEWDPEKVFLGS*RFGCNF Trigger: AAAGTTGCAGCCAAATCTTCAACTACCTAGGAAGAC...CTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTAGCCAGACACCACTTTaGACATTACAGTCCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LSHPHLCSLLLACHSRKCSQTPL*TLQSQT Trigger: TGTTTGGGACTGTAATGTGCAAAGTGGTGTCTGGCT...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTCATCCATCCAAGATGTaGATACTGTGCAAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSHPHLCSLLLACHSRKCHPSKM*ILCKEV Trigger: CACTTCCTTGCACAGTATGCACATCTTGGATGGATG...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | CATACTGTGCAAGGAAGTGAGGAAAAGAACCACGTTGAATGGGACCCAGAAAAGTCAGCTGTTGGCTTATaGTACATCCATCCAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: HTVQGSEEKNHVEWDPEKSAVGL*YIHPRC Trigger: ACATCTTGGATGGATGTAGCATAAGCCAACAGCTGA...CTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCTCACTTCCTTGCACAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CCA 90 bp | TCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCGGGAGGAGTGCTGCTaGCAGGATGATGACTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLVIVFQVLATTYMASFMREECC*QDDDFS Trigger: TGAAAAGTCATCATCCTGCCAGCAGCACTCCTCCCG...CATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCGTCTGTATCCTCATGTaGGTGCAGCTCAATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLVIVFQVLATTYMASFVCILM*VQLNEQ Trigger: CTGCTCATTGAGCTGCACTCACATGAGGATACAGAC...GAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | TGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCTGAACTTTTTACACAATCACAGGCTTaGTGTTGTGCCAGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVPSVGNNIYGILHAELFTQSQA*CCARHA Trigger: TGCATGCCTGGCACAACATCAAGCCTGTGATTGTGT...AAAAAGTTCAGCATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATTCACACCCACACCTTTaGTCACTGCTACTAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: VFSHCVPSVGNNIYGILHSHPHL*SLLLAC Trigger: GCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA...ATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CCA 90 bp | ACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCAAATGTAGTCTACGCTaGAGGAACGGGAGGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSLVIVFQVLATTYMASKCSLR*RNGRSA Trigger: AGCACTCCTCCCGTTCCTCCAGCGTAGACTACATTT...GGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| 3UTR CAA 72 bp | AATGATTTCTGTGACATGGGTGGCATAAGTCAGCTGTaGGCTTATGCTACATCCATCCAAGATGTGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: NDFCDMGGISQL*AYATSIQDVHT Trigger: AGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGACTTATGCCACCCATGTCACAGAAATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | GCAGTGAGTAAAGGAAATGATTTCTGTGACATGGGTGGCATAAGTCAGCTGTTGTGGCTGCAACTTTTCTaGAATATTTCTGAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AVSKGNDFCDMGGISQLLWLQLF*NISERC Trigger: ACACCTCTCAGAAATATTTCAGAAAAGTTGCAGCCA...CAACAGCTGACTTATGCCACCCATGTCACAGAAATCATTTCCTTTACTCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR GCA 90 bp | GCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGTGAGGAAAAGAAGATGTGCATACTGTaGAAGGAAGTGAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYATSIQDVHTVQGSEEKKMCIL*KEVRKR Trigger: TCTTTTCCTCACTTCCTTGCACAGTATGCACATCTT...CTTTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCCTGAGAGGTGTTTCTTaGACTTCTCCCCAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLVIVFQVLATTYMASFLRGVS*TSPQQK Trigger: CTTTTGTTGGGGAGAAGTTCAAGAAACACCTCTCAG...GAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATCATCCATCCAAGATGTaGATACTGTGCAAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSHCVPSVGNNIYGILHHPSKM*ILCKEV Trigger: CACTTCCTTGCACAGTATGCACATCTTGGATGGATG...ATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | CCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTCACTGCTACTAGCATaGCATTCAAGAAAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFTPTPLLTATSMPFKKMSLLLA*HSRKCF Trigger: AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGA...CATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCTCACTGTTGTCACACTaGGGTCAAGTGTATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSLVIVFQVLATTYMASFSLLSH*GQVYNP Trigger: TGGATTATACACTTGACCTCAGTGTGACAACAGTGA...GAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | TCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGAACTTGCCATTTGTCTaGATAAGTTCCGCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVIVFQVLATTYMASFMNLPFV*ISSASQ Trigger: CTGTGATGCGGAACTTATTCAGACAAATGGCAAGTT...CATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | CATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCTGAACTTAAGATGTGCATACTGTaGAAGGAAGTGAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HCVPSVGNNIYGILHAELKMCIL*KEVRKR Trigger: TCTTTTCCTCACTTCCTTGCACAGTATGCACATCTT...AAGTTCAGCATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | GCAGTGAGTAAAGGAAATGATTTCTGTGACATGGGTGGCATAAGTCAGCTGTTGTCACTGCTACTAGCATaGCATTCAAGAAAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVSKGNDFCDMGGISQLLSLLLA*HSRKCF Trigger: AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGA...CAACAGCTGACTTATGCCACCCATGTCACAGAAATCATTTCCTTTACTCACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CCA 90 bp | TTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTTTGTGTTCCAAGTGTTaGCAACAACATATATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTPTPLLTATSMPFKKMFLCSKC*QQHIWH Trigger: ATGCCATATATGTTGTTGCCAACACTTGGAACACAA...AAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR TCA 90 bp | ACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTGGCTGCAACTTTTCTaGAATATTTCTGAGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TMSLVIVFQVLATTYMASWLQLF*NISERC Trigger: ACACCTCTCAGAAATATTTCAGAAAAGTTGCAGCCA...GGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR GCA 90 bp | AACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCTCAGCTGTTGGCTTATaGTACATCCATCCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NYVFSHCVPSVGNNIYGISAVGL*YIHPRC Trigger: ACATCTTGGATGGATGTAGCATAAGCCAACAGCTGA...GATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | TTGATCCTCACAAAATGTAGTCTACGCTGGAGGAACGGGAGGAGTGCTGCTGGCGGTCTTGTTGTGGTTTaGACACCTCTTCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LILTKCSLRWRNGRSAAGGLVVV*TPLQLV Trigger: CACCAGCTGAAGAGGTGTCAAAACCACAACAAGACC...GCCAGCAGCACTCCTCCCGTTCCTCCAGCGTAGACTACATTTTGTGAGGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | CCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGATGCTCCTCAGCTTCTaGCAGACCACAAGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFTPTPLLTATSMPFKKMMLLSF*QTTRTR Trigger: CCTGGTCCTTGTGGTCTGCAAGAAGCTGAGGAGCAT...CATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | GAACGGGAGGAGTGCTGCTGGCAGGATGATGACTTTTCACAGCTCTCCCTAGGCATGTTCATTTTGAAGTaGGTGAAGATCTTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: EREECCWQDDDFSQLSLGMFILK*VKIFHF Trigger: GAAGTGGAAGATCTTCACCAACTTCAAAATGAACAT...GCCTAGGGAGAGCTGTGAAAAGTCATCATCCTGCCAGCAGCACTCCTCCCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTCCGCATCACAGGGGCTaGAGAAGATATCAGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHPHLCSLLLACHSRKCPHHRG*RRYQGS Trigger: ACTACCCTGATATCTTCTCAAGCCCCTGTGATGCGG...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | TGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGTGAGGAAACCGCATCACAGGGGCTaGAGAAGATATCAGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: WLMLHPSKMCILCKEVRKPHHRG*RRYQGS Trigger: ACTACCCTGATATCTTCTCAAGCCCCTGTGATGCGG...TTTCCTCACTTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS TCA 90 bp | TTGAGAAGATATCAGGGTAGTAGTAGTCGGTCACTGTTGTCACACTaGGGTCAAGTGTATAATCCATCAAGGCAGCGGGACCTTAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRRYQGSSSRSLLSH*GQVYNPSRQRDLSD Trigger: GTCACTAAGGTCCCGCTGCCTTGATGGATTATACACTTGACCTCAGTGTGACAACAGTGACCGACTACTACTACCCTGATATCTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS TCA 90 bp | GAGCAACTTGCCATTTGTCTGAATAAGTTCCGCATCACAGGGGCTTaGGAAGATATCAGGGTAGTAGTAGTCGGTCACTGTTGTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: EQLAICLNKFRITGA*EDIRVVVVGHCCHT Trigger: AGTGTGACAACAGTGACCGACTACTACTACCCTGATATCTTCTCAAGCCCCTGTGATGCGGAACTTATTCAGACAAATGGCAAGTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | CCTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGAAGCCAGACACCACTTaGCACATTACAGTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFTPTPLLTATSMPFKKMKPDTT*HITVPN Trigger: GTTTGGGACTGTAATGTGCAAAGTGGTGTCTGGCTT...CATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAGGCATAAGTCAGCTGTaGGCTTATGCTACATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VSCWLMLHPSKMCILCKEGISQL*AYATSI Trigger: GATGGATGTAGCATAAGCCAACAGCTGACTTATGCC...TTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | CTTTCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTCACACCCACACCTTaGCTCACTGCTACTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSHPHLCSLLLACHSRKCFTPTP*LTATSM Trigger: CATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA...ACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | GTCAGCTGTTGGCTTATGCTACATCCATCCAAGATGTGCATACTGTGCAAGGAAAGGAAAAGAACCACGTaGAATGGGACCCAGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSCWLMLHPSKMCILCKERKRTT*NGTQKS Trigger: ACTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCT...TTCCTTGCACAGTATGCACATCTTGGATGGATGTAGCATAAGCCAACAGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS-3UTR CAA 90 bp | ACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCGGTCTTGTTGTGGTTTaGACACCTCTTCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TMSLVIVFQVLATTYMASGLVVV*TPLQLV Trigger: CACCAGCTGAAGAGGTGTCAAAACCACAACAAGACC...GGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | ATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCTTCACACCCACACCTTaGCTCACTGCTACTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MSLVIVFQVLATTYMASFFTPTP*LTATSM Trigger: CATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGAA...GAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | ACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCAAGCCAGACACCACTTaGCACATTACAGTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TMSLVIVFQVLATTYMASKPDTT*HITVPN Trigger: GTTTGGGACTGTAATGTGCAAAGTGGTGTCTGGCTT...GGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | CATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCTTCATGCTGAACTTAGGAAAAGAACCACGTaGAATGGGACCCAGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCVPSVGNNIYGILHAELRKRTT*NGTQKS Trigger: ACTTTTCTGGGTCCCATTCAACGTGGTTCTTTTCCT...AAGTTCAGCATGAAGGATGCCATATATGTTGTTGCCAACACTTGGAACACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | AACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCGGCATAAGTCAGCTGTaGGCTTATGCTACATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NYVFSHCVPSVGNNIYGIGISQL*AYATSI Trigger: GATGGATGTAGCATAAGCCAACAGCTGACTTATGCC...GATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | TCACACCCACACCTTTGCTCACTGCTACTAGCATGCCATTCAAGAAAATGTTTTATTGTGTTCCAAGTGTaGGCAACAACATATATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPHLCSLLLACHSRKCFIVFQV*ATTYMA Trigger: TGCCATATATGTTGTTGCCAACACTTGGAACACAAT...AAAACATTTTCTTGAATGGCATGCTAGTAGCAGTGAGCAAAGGTGTGGGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS-3UTR CAA 90 bp | ACTATGTCTTTAGTCATTGTGTTCCAAGTGTTGGCAACAACATATATGGCATCCATGTTCATTTTGAAGTaGGTGAAGATCTTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TMSLVIVFQVLATTYMASMFILK*VKIFHF Trigger: GAAGTGGAAGATCTTCACCAACTTCAAAATGAACAT...GGATGCCATATATGTTGTTGCCAACACTTGGAACACAATGACTAAAGACATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS TCA 72 bp | TTAGCCATACTGCCAGGCACAGCGTTGTGCCCATCCTaGTCGTCCTCACCTTTAGGGCATACACGGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAILPGTALCPS*SSSPLGHTRHG Trigger: TCCATGCCGTGTATGCCCTAAAGGTGAGGACGATCAGGATGGGCACAACGCTGTGCCTGGCAGTATGGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS TCA 72 bp | TATCAGGGTAGTAGTAGTCGGTCACTGTTGTCACACTaGGGTCAAGTGTATAATCCATCAAGGCAGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YQGSSSRSLLSH*GQVYNPSRQRD Trigger: GTCCCGCTGCCTTGATGGATTATACACTTGACCTCAGTGTGACAACAGTGACCGACTACTACTACCCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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| CDS TCA 72 bp | GCCATTTGTCTGAATAAGTTCCGCATCACAGGGGCTTaGGAAGATATCAGGGTAGTAGTAGTCGGTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: AICLNKFRITGA*EDIRVVVVGHC Trigger: ACAGTGACCGACTACTACTACCCTGATATCTTCTCAAGCCCCTGTGATGCGGAACTTATTCAGACAAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326306.5 |
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| CDS TCA 72 bp | GTCATTTGTCTGAATAAGTTCCGCATCACAGGGGCTTaGGAAGATATCAGGGTAGTAGTAGTCGGTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: VICLNKFRITGA*EDIRVVVVGHC Trigger: ACAGTGACCGACTACTACTACCCTGATATCTTCTCAAGCCCCTGTGATGCGGAACTTATTCAGACAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414803.1 |
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| CDS GCA 72 bp | TGTAGAAGCCAATGTAATAAAAGCCAGACACCACTTTaGACATTACAGTCCCAAACACCCACTGGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CRSQCNKSQTPL*TLQSQTPTGPA Trigger: TGCTGGACCAGTGGGTGTTTGGGACTGTAATGTGCAAAGTGGTGTCTGGCTTTTATTACATTGGCTTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326306.5 ENST00000414803.1 |
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