RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCR7 (Homo sapiens)

Ensembl gene IDs: ENSG00000126353

Ensembl transcript IDs: ENST00000246657.2, ENST00000578085.1, ENST00000579344.1

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGGAGCCCAGAGTGTGGCTTTGATCACGCGGAGGCAGCTGGCCTaGCCTGCAGGAAACACCACACTCTCCCCTGTTGAGAGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: SGAQSVALITRRQLA*PAGNTTLSPVESLG
Trigger: TCCCAGGCTCTCAACAGGGGAGAGTGTGGTGTTTCCTGCAGGCCAGGCCAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 90 bp CCCATCCCAGTGGAGCCAAGAGCTGAGTGCATGTCATCCCCACTCTaGAGCCCAGAGTGTGGCTTTGATCACGCGGAGGCAGCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: PIPVEPRAECMSSPL*SPECGFDHAEAAGL
Trigger: CAGGCCAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACATGCACTCAGCTCTTGGCTCCACTGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR GCA 90 bp CAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTaGACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAG +
Preference number: 1 (lower is better)
Translates to: QKVHSEDSSGHSHAP*THPPWPLHSSRWEQ
Trigger: CTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR GCA 90 bp TTTCCCTTGTCCTCTCCTCCCATCCCAGTGGAGCCAAGAGCTGAGTaGATGTCATCCCCACTCTGGAGCCCAGAGTGTGGCTTTGATCAC +
Preference number: 1 (lower is better)
Translates to: FPLSSPPIPVEPRAE*MSSPLWSPECGFDH
Trigger: GTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACATGCACTCAGCTCTTGGCTCCACTGGGATGGGAGGAGAGGACAAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR TCA 90 bp ATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCTaGGCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: ISGLGDKAWFSEELV*AFESVGGQKVHSED
Trigger: GTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 90 bp CCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTaGTCTGAGCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAG +
Preference number: 1 (lower is better)
Translates to: PLSLVLEIRPGFRKS*SEHLSLWEARRFIQ
Trigger: CTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CAA 90 bp GGCCTTGGGCGGCCACTGTCACCCTCCCCGCCCCTGACATTTCCCTaGTCCTCTCCTCCCATCCCAGTGGAGCCAAGAGCTGAGTGCATG +
Preference number: 2 (lower is better)
Translates to: GLGRPLSPSPPLTFP*SSPPIPVEPRAECM
Trigger: CATGCACTCAGCTCTTGGCTCCACTGGGATGGGAGGAGAGGACAAGGGAAATGTCAGGGGCGGGGAGGGTGACAGTGGCCGCCCAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CAA 90 bp CCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTaGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACA +
Preference number: 2 (lower is better)
Translates to: PEGSFRGLFRPLPRP*HSPSLAPSLQQVGT
Trigger: TGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR-3UTR TCA 90 bp ATGTCATCCCCACTCTGGAGCCCAGAGTGTGGCTTTGATCACGCGGAGGCAGCTTGGCTTGGAGGACAGTaGAGAAAACGATGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: MSSPLWSPECGFDHAEAAWLGGQ*RKRWRE
Trigger: CTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCA...AGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR-3UTR GCA 90 bp ATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTTCAGAGGATGTCCTGAGTCATTaGATCTGCTCCCTATCCCCA +
Preference number: 2 (lower is better)
Translates to: IPAGLEDSEENDGGRGSEDVLSH*ICSLSP
Trigger: TGGGGATAGGGAGCAGATGCAATGACTCAGGACATC...CTCTGAACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR-3UTR TCA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTCACCCTCCCCGCCCCTaGCATTTCCCTTGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: EHEERFSVPVTKNKEQARHPPRP*HFPCPL
Trigger: GAGAGGACAAGGGAAATGTCAGGGGCGGGGAGGGTG...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR-3UTR CCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGGGTGGGAACAGTTTCTaGACTTTCACTTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLGGNSF*TFTFSF
Trigger: AAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACC...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR CAA 90 bp GTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCTGAGCATTaGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: VLEIRPGFRKSWSEH*SLWEARRFIQRTLQ
Trigger: CTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR-3UTR GCA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGGATGTCCTGAGTCATTaGATCTGCTCCCTATCCCCA +
Preference number: 2 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWDVLSH*ICSLSP
Trigger: TGGGGATAGGGAGCAGATGCAATGACTCAGGACATC...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR TCA 72 bp CATGTCATCCCCACTCTGGAGCCCAGAGTGTGGCTTTaGTCACGCGGAGGCAGCTGGCCTGGCCTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: HVIPTLEPRVWL*SRGGSWPGLQE
Trigger: TTCCTGCAGGCCAGGCCAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp CAGAGTGTGGCTTTGATCACGCGGAGGCAGCTGGCCTaGCCTGCAGGAAACACCACACTCTCCCCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: QSVALITRRQLA*PAGNTTLSPVE
Trigger: CTCAACAGGGGAGAGTGTGGTGTTTCCTGCAGGCCAGGCCAGCTGCCTCCGCGTGATCAAAGCCACACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp TTTAGGGCGGCGTGGCAGCTGCCATTCCCGCTGGCTTaGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTT +
Preference number: 3 (lower is better)
Translates to: FRAAWQLPFPLA*RTVKKTMEGGV
Trigger: AACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAATGGCAGCTGCCACGCCGCCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp GTGGAGCCAAGAGCTGAGTGCATGTCATCCCCACTCTaGAGCCCAGAGTGTGGCTTTGATCACGCGGAGGCA +
Preference number: 3 (lower is better)
Translates to: VEPRAECMSSPL*SPECGFDHAEA
Trigger: TGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACATGCACTCAGCTCTTGGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp CCTGTGACAAAGAACAAAGAACAAGCTCGTGGGCCTTaGGCGGCCACTGTCACCCTCCCCGCCCCTGACATT +
Preference number: 3 (lower is better)
Translates to: PVTKNKEQARGP*AATVTLPAPDI
Trigger: AATGTCAGGGGCGGGGAGGGTGACAGTGGCCGCCCAAGGCCCACGAGCTTGTTCTTTGTTCTTTGTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR-3UTR CAA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGAGGATGTCCTGAGTCATaGCATCTGCTCCCTATCCCC +
Preference number: 3 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGGCPES*HLLPIP
Trigger: GGGGATAGGGAGCAGATGCAATGACTCAGGACATCC...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR-3UTR CAA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCGGATGTCCTGAGTCATaGCATCTGCTCCCTATCCCC +
Preference number: 3 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACGCPES*HLLPIP
Trigger: GGGGATAGGGAGCAGATGCAATGACTCAGGACATCC...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR-3UTR CAA 90 bp ATGTCATCCCCACTCTGGAGCCCAGAGTGTGGCTTTGATCACGCGGAGGCAGCTAGGGGTTCAGAGAGTTaGTTTGACCAGCTGATGTCC +
Preference number: 3 (lower is better)
Translates to: MSSPLWSPECGFDHAEAARGSES*FDQLMS
Trigger: GGACATCAGCTGGTCAAACAAACTCTCTGAACCCCT...AGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp CTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTaGTCTGAGCATTTGAGTCTGTGGGAGGCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LVLEIRPGFRKS*SEHLSLWEARR
Trigger: CCTTCTGGCCTCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR TCA 72 bp CTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCTaGGCATTTGAGTCTGTGGGAGGCCAGAAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: LGDKAWFSEELV*AFESVGGQKVH
Trigger: ATGAACCTTCTGGCCTCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR TCA 72 bp ATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTaGTGTCCGCTTTTCCTCACCAAGCCAAGAAGTCTC +
Preference number: 3 (lower is better)
Translates to: MEGGVQRVCLTS*CPLFLTKPRSL
Trigger: GAGACTTCTTGGCTTGGTGAGGAAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CCA 72 bp TGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTaGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTG +
Preference number: 3 (lower is better)
Translates to: CTHPPWPLHSSR*EQFLDFHFQFL
Trigger: CAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR GCA 72 bp TCAAGGGAAAACTTTATCTGTGTGTGGGTAAAATGTTaGTCTCTTAACGAATCGAAAGCAGAACATGAGGAG +
Preference number: 3 (lower is better)
Translates to: SRENFICVWVKC*SLNESKAEHEE
Trigger: CTCCTCATGTTCTGCTTTCGATTCGTTAAGAGAGCAACATTTTACCCACACACAGATAAAGTTTTCCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCGGGCACGGTGGCGGTaGGCTGAGACAGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLRARWR*AETAWT
Trigger: CGTCCAGGCTGTCTCAGCTCACCGCCACCGTGCCCG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TGGGAGGGCGACGCGGCAAGTGAGGGGATGAGTGTGCTTTTAGGGCGGCGTGGCTCACGCGGAGGCAGCTaGCCTGGCCTGCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: WEGDAASEGMSVLLGRRGSRGGS*PGLQET
Trigger: TGTTTCCTGCAGGCCAGGCCAGCTGCCTCCGCGTGA...GCCACGCCGCCCTAAAAGCACACTCATCCCCTCACTTGCCGCGTCGCCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp TGGGAGGGCGACGCGGCAAGTGAGGGGATGAGTGTGCTTTTAGGGCGGCGTGGCGCAGCTGGCCTGGCCTaGAGGAAACACCACACTCTC +
Preference number: 4 (lower is better)
Translates to: WEGDAASEGMSVLLGRRGAAGLA*RKHHTL
Trigger: GAGAGTGTGGTGTTTCCTGCAGGCCAGGCCAGCTGC...GCCACGCCGCCCTAAAAGCACACTCATCCCCTCACTTGCCGCGTCGCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
3UTR CAA 72 bp GCATGTCATCCCCACTCTGGAGCCCAGAGTGTGGCTTaGATCACGCGGAGGCAGCTGGCCTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ACHPHSGAQSVA*ITRRQLAWPAG
Trigger: TCCTGCAGGCCAGGCCAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGCTCCAGAGTGGGGATGACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACGGGCACGGTGGCGGTaGGCTGAGACAGCCTGGACG +
Preference number: 4 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGRARWR*AETAWT
Trigger: CGTCCAGGCTGTCTCAGCTCACCGCCACCGTGCCCG...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCACACAGGAAGGCTGTaGCCGGCCTCGCACTACCCC +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLHTGRL*PASHYP
Trigger: GGGGTAGTGCGAGGCCGGGCACAGCCTTCCTGTGTG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAGACCACTGCCGGAGCTaGTCCTGGCTGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLADHCRS*SWLRQP
Trigger: GGGCTGCCTCAGCCAGGAGCAGCTCCGGCAGTGGTC...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCGGCCTCCACACTCATaGAGGAGCGCCGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLRPPHS*RSAGCA
Trigger: GGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGGACCACTGCCGGAGCTaGTCCTGGCTGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLWEARRFIQRTLQATPTDHCRS*SWLRQP
Trigger: GGGCTGCCTCAGCCAGGAGCAGCTCCGGCAGTGGTC...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp CACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTGGGCGGCGTGGCAGCTaGCATTCCCGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HSPSLAPSLQQVGTVSGLGRRGS*HSRWLG
Trigger: TCCAAGCCAGCGGGAATGGCAGCTGCCACGCCGCCC...AAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp GACAAAGAACAAAGAACAAGCTCGTGGGCCTTGGGCGGCCACTGTCACCCTCCCCCCCTGTTGAGAGCCTaGGAGGGCGACGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: DKEQRTSSWALGGHCHPPPLLRA*EGDAAS
Trigger: ACTTGCCGCGTCGCCCTCCCAGGCTCTCAACAGGGG...GGGAGGGTGACAGTGGCCGCCCAAGGCCCACGAGCTTGTTCTTTGTTCTTTGTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCGTACAAGAAAGGGTTaGCGCAGCAGCGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLRTRKG*RSSGRR
Trigger: CCTGCGTCCGCTGCTGCGTCAACCCTTTCTTGTACG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp GCTGCCATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTGAGGAGCGCCGGATGTaGCGACAGGAAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: AAIPAGLEDSEENDGGRGEERRM*RQEDHC
Trigger: GCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTC...ACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAATGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTCGACAGGAAGACCACTaGCGGAGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSPSLAPSLQQVGTVSGLRQEDH*RSCSWL
Trigger: CAGCCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCG...AAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGGAGGAGCGCCGGATGTaGCGACAGGAAGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SLWEARRFIQRTLQATPTEERRM*RQEDHC
Trigger: GCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTC...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAGCGATTGGACCCTGTTaGAACAGAGCTCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLAAIGPC*NRAPHR
Trigger: GCGGTGGGGAGCTCTGTTGCAACAGGGTCCAATCGC...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR CCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGAGACAGCCTGGACGATaGCCACGTAGCGGTCAATGC +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLRQPGR*PRSGQC
Trigger: GCATTGACCGCTACGTGGCCATCGTCCAGGCTGTCT...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACGGCCTCCACACTCATaGAGGAGCGCCGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSRPPHS*RSAGCA
Trigger: GGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCG...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGGCTTTTAGGGCGGCGTaGCAGCTGCCATTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SLWEARRFIQRTLQATPTAFRAA*QLPFPL
Trigger: CAGCGGGAATGGCAGCTGCCACGCCGCCCTAAAAGC...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp CCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCACACTCTCCCCTGTTaGGAGCCTGGGAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: PPWPLHSSRWEQFLDFHFHTLPC*EPGRAT
Trigger: CGTCGCCCTCCCAGGCTCTCAACAGGGGAGAGTGTG...AAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGAAAGTTGGCCACCGTCTaGGCCAGGACCACCCCATTG +
Preference number: 4 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGKLATV*ARTTPL
Trigger: CAATGGGGTGGTCCTGGCCCAGACGGTGGCCAACTT...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACGGAGGCAGCTGGCCTaGCCTGCAGGAAACACCACA +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSRRQLA*PAGNTT
Trigger: TGTGGTGTTTCCTGCAGGCCAGGCCAGCTGCCTCCG...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACCAAGCTCGTGGGCCTTaGGCGGCCACTGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHQARGP*AATVTL
Trigger: GAGGGTGACAGTGGCCGCCCAAGGCCCACGAGCTTG...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp GACAAAGAACAAAGAACAAGCTCGTGGGCCTTGGGCGGCCACTGTCACCCTCCCCAAAGAACAAGCTCGTaGGCCTTGGGCGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: DKEQRTSSWALGGHCHPPQRTSS*ALGGHC
Trigger: ACAGTGGCCGCCCAAGGCCCACGAGCTTGTTCTTTG...GGGAGGGTGACAGTGGCCGCCCAAGGCCCACGAGCTTGTTCTTTGTTCTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTGCCACCGCCAGGTTaGGCAGGTAGGTATCGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSLPPPG*AGRYRS
Trigger: TGACCGATACCTACCTGCTCAACCTGGCGGTGGCAG...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp CTGATGTCCGCTTTTCCTCACCAAGCCAAGAAGTCTCCCCACTATCTCTGGTCTACGGTGGCGGTGAGCTaGGACAGCCTGGACGATGGC +
Preference number: 4 (lower is better)
Translates to: LMSAFPHQAKKSPHYLWSTVAVS*DSLDDG
Trigger: GCCATCGTCCAGGCTGTCTCAGCTCACCGCCACCGT...AGACCAGAGATAGTGGGGAGACTTCTTGGCTTGGTGAGGAAAAGCGGACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCCGTACAAGAAAGGGTTaGCGCAGCAGCGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACRTRKG*RSSGRR
Trigger: CCTGCGTCCGCTGCTGCGTCAACCCTTTCTTGTACG...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp TGGGAGGGCGACGCGGCAAGTGAGGGGATGAGTGTGCTTTTAGGGCGGCGTGGCTTCAGAGAGTTTGTTTaGCCAGCTGATGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: WEGDAASEGMSVLLGRRGFREFV*PADVRF
Trigger: AAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAA...GCCACGCCGCCCTAAAAGCACACTCATCCCCTCACTTGCCGCGTCGCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCGCGCTCAAAGTTGCGTaGCTGGAGCAGGGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACALKVA*LEQGAD
Trigger: ATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGC...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTCCCTCGTTCCCAGCCTaGGCTCGGGCATTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLPSFPA*ARAFVV
Trigger: GACTACAAATGCCCGAGCGCAGGCTGGGAACGAGGG...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR CCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCATCACTGCTGCTCCTCTaGAGGTCACTGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLASLLLL*RSLYRS
Trigger: GCTCCTGTACAGTGACCTCCAGAGGAGCAGCAGTGA...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCATCAAAGTTGCGTGCCTaGAGCAGGGTGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLASKLRA*SRVRMM
Trigger: CATCATCCGCACCCTGCTCCAGGCACGCAACTTTGA...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTAAGTTGGCCACCGTCTaGGCCAGGACCACCCCATTG +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLKLATV*ARTTPL
Trigger: CAATGGGGTGGTCCTGGCCCAGACGGTGGCCAACTT...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTCCTCACCAAGCCAAGTGCCGGAGCTGCTCCTaGCTGAGGCAGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSESLFDQLMSAFPHQAKCRSCS*LRQPRS
Trigger: GGACCTGGGCTGCCTCAGCCAGGAGCAGCTCCGGCA...CTTGGCTTGGTGAGGAAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAGGCATACCTGGAAAATaGCAAGGAGAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLAGIPGK*QGEPPP
Trigger: TGGTGGTGGCTCTCCTTGTCATTTTCCAGGTATGCC...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTACACGACCAGCCCATTaGCCAGTAGGCCCACGAAAC +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLTRPAH*PVGPRN
Trigger: GTTTCGTGGGCCTACTGGGCAATGGGCTGGTCGTGT...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTGCATCGCTTGCTCACTaGTGCTCCTCTGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLASLAH*CSSGGH
Trigger: GTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGATGC...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCTGTTGCGCTCAAAGTTaGGTGCCTGGAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACCCAQS*VPGAGC
Trigger: GCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACA...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTTGCCGGAGCTGCTCCTaGCTGAGGCAGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFCRSCS*LRQPRS
Trigger: GGACCTGGGCTGCCTCAGCCAGGAGCAGCTCCGGCA...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACATGGGGAGAAGGTGGTaGTGGTCTCGGCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHMGRRW*WSRPPH
Trigger: GTGTGGAGGCCGAGACCACCACCACCTTCTCCCCAT...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCTTGGAGATAAGGCCTaGTTTTCGGAAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLLGDKA*FSEELV
Trigger: GACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGAGGCATACCTGGAAAATaGCAAGGAGAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGGIPGK*QGEPPP
Trigger: TGGTGGTGGCTCTCCTTGTCATTTTCCAGGTATGCC...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAGTTTGTTTGACCAGCTaGTGTCCGCTTTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLAVCLTS*CPLFLT
Trigger: GGTGAGGAAAAGCGGACATCAGCTGGTCAAACAAAC...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCGCTTGCTCACTGCTaGTCCTCTGGAGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLSLAHC*SSGGHC
Trigger: ACAGTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGA...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACGAGCATCGCATCGCTTaGTCACTGCTGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHEHRIA*SLLLLW
Trigger: CCAGAGGAGCAGCAGTGAGCAAGCGATGCGATGCTC...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp AAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGCGACAGGAAGACCACTaGCGGAGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KPRSLPTISGLGDKAWFSRQEDH*RSCSWL
Trigger: CAGCCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCG...CGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTCGAAGACCCAGGACTTaGCCGCGCTGTAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LAPSLQQVGTVSGLSLSVRRPRT*PRCRPR
Trigger: TCTGGGCCTACAGCGCGGCCAAGTCCTGGGTCTTCG...AACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCTGCCATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTATGAGCTTGCAAAAGTaGACACCGAAGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AAIPAGLEDSEENDGGRGMSLQK*TPKTQD
Trigger: GTCCTGGGTCTTCGGTGTCCACTTTTGCAAGCTCAT...ACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAATGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp CTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCAGACAGCCTGGACGATaGCCACGTAGCGGTCAATGC +
Preference number: 4 (lower is better)
Translates to: LPTISGLGDKAWFSEELVRQPGR*PRSGQC
Trigger: GCATTGACCGCTACGTGGCCATCGTCCAGGCTGTCT...GACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCTCAAAGTTGCGTGCCTaGAGCAGGGTGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACSKLRA*SRVRMM
Trigger: CATCATCCGCACCCTGCTCCAGGCACGCAACTTTGA...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTATGGGGAGAAGGTGGTaGTGGTCTCGGCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: HLSLWEARRFIQRTLQATMGRRW*WSRPPH
Trigger: GTGTGGAGGCCGAGACCACCACCACCTTCTCCCCAT...AGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACAGAAGAGTCGCCTATaGGGAGAAGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSQKSRL*GEGGGG
Trigger: ACCACCACCACCTTCTCCCCATAGGCGACTCTTCTG...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTGCATTTTCTATTCTaGGGACAGGCAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGLHFLF*GQAAAV
Trigger: GACAGCGGCTGCCTGTCCCCAGAATAGAAAATGCAG...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR TCA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGTGTAGATGGCAAAGATaGGCTTGCAAAAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLCRWQR*ACKSGH
Trigger: GTGTCCACTTTTGCAAGCTCATCTTTGCCATCTACA...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGACGGTGGCGGTGAGCTaGGACAGCCTGGACGATGGC +
Preference number: 4 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWTVAVS*DSLDDG
Trigger: GCCATCGTCCAGGCTGTCTCAGCTCACCGCCACCGT...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCTCGGAAGAGCTGGTCTaGGCATTTGAGTCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACSEELV*AFESVG
Trigger: TCCCACAGACTCAAATGCTCAGACCAGCTCTTCCGA...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp AAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGGGCGACGCGGCAAGTaGGGGGATGAGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KPRSLPTISGLGDKAWFSGRRGK*GDECAF
Trigger: AAAAGCACACTCATCCCCTCACTTGCCGCGTCGCCC...CGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp ATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTTCAGAGTGGCTAGTATCCAGATaGCCACACAGGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IPAGLEDSEENDGGRGSEWLVSR*PHRTAC
Trigger: GCAAGCTGTCCTGTGTGGGCATCTGGATACTAGCCA...CTCTGAACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTGGCTAGTATCCAGATaGCCACACAGGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLWLVSR*PHRTAC
Trigger: GCAAGCTGTCCTGTGTGGGCATCTGGATACTAGCCA...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp CGCTTTTCCTCACCAAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATAGCGCTCAAAGTTGCGTaGCTGGAGCAGGGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: RFSSPSQEVSPLSLVLEIALKVA*LEQGAD
Trigger: ATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGC...TATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTTGGTGAGGAAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGTCCGCACGTCCTTCTTaGAGCACAAAGACTCGAACA +
Preference number: 4 (lower is better)
Translates to: SLWEARRFIQRTLQATPTSARPS*STKTRT
Trigger: TGTTCGAGTCTTTGTGCTCCAAGAAGGACGTGCGGA...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTCGAAGACCCAGGACTTaGCCGCGCTGTAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFRRPRT*PRCRPR
Trigger: TCTGGGCCTACAGCGCGGCCAAGTCCTGGGTCTTCG...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACACTGTACAGGAGCTCTaGGATGGAGAGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHTVQEL*DGEHCG
Trigger: GCCACAGTGCTCTCCATCCCAGAGCTCCTGTACAGT...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCACCATCTGGGCCACCTaGATGGTGATAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPTISGLGDKAWFSEELVTIWAT*MVIKAS
Trigger: GGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGT...GACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCAAAGCCGATCACCATCTaGGCCACCTGGATGGTGATA +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSKPITI*ATWMVI
Trigger: TATCACCATCCAGGTGGCCCAGATGGTGATCGGCTT...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCAATGTCATCCCCACTCTaGAGCCCAGAGTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SPSLAPSLQQVGTVSGLSMSSPL*SPECGF
Trigger: AAAGCCACACTCTGGGCTCCAGAGTGGGGATGACAT...TGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTGAAGCCCCTGATGCTTaGCCTGGCAGTCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LAPSLQQVGTVSGLSLSVEAPDA*PGSPVL
Trigger: GAGGACTGGACTGCCAGGCCAAGCATCAGGGGCTTC...AACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR TCA 90 bp CACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTGTAGGAGCATGCCACTaGAGAAGCTCATCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HSPSLAPSLQQVGTVSGLVGACH*RSSSCR
Trigger: TCTACAAGATGAGCTTCTTCAGTGGCATGCTCCTAC...AAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTGCATCGCTTGCTCACTaGTGCTCCTCTGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFASLAH*CSSGGH
Trigger: GTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGATGC...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCATGAGCTTGCAAAAGTaGACACCGAAGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACMSLQK*TPKTQD
Trigger: GTCCTGGGTCTTCGGTGTCCACTTTTGCAAGCTCAT...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGCTGCCACCGCCAGGTTaGGCAGGTAGGTATCGGTCA +
Preference number: 4 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWLPPPG*AGRYRS
Trigger: TGACCGATACCTACCTGCTCAACCTGGCGGTGGCAG...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp TGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTGCAGCTGGAAGACTATaGAGACCACGACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: WPLHSSRWEQFLDFHFQFAAGRL*RPRPQR
Trigger: TCGCTGTGGTCGTGGTCTTCATAGTCTTCCAGCTGC...AAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTCCCAGAGTGTGGCTTTaGTCACGCGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EHEERFSVPVTKNKEQARPRVWL*SRGGSW
Trigger: CCAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGG...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTAGAGGGCTTCCTAGCTaGATTTTCTATTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLAPSLQQVGTVSGLSLRGLPS*IFYSGD
Trigger: GTCCCCAGAATAGAAAATGCAGCTAGGAAGCCCTCT...AAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR CCA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTGTCCATGACGCTCTCTaGGCGGTAAAACCACACAGG +
Preference number: 4 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFVHDAL*AVKPHR
Trigger: CCTGTGTGGTTTTACCGCCCAGAGAGCGTCATGGAC...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAAAGTGTAGTCCACTGTaGTGTTGTCTCCGATGTAAT +
Preference number: 4 (lower is better)
Translates to: EARRFIQRTLQATPTPLAKCSPL*CCLRCN
Trigger: ATTACATCGGAGACAACACCACAGTGGACTACACTT...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTGGATGGAGAGCACTGTaGCTAGTATCCAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: HLSLWEARRFIQRTLQATGWRAL*LVSRCP
Trigger: TGGGCATCTGGATACTAGCCACAGTGCTCTCCATCC...AGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTACTGTACAGGAGCTCTaGGATGGAGAGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LAPSLQQVGTVSGLSLSVTVQEL*DGEHCG
Trigger: GCCACAGTGCTCTCCATCCCAGAGCTCCTGTACAGT...AACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CGCTTTTCCTCACCAAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATATCACTGCTGCTCCTCTaGAGGTCACTGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: RFSSPSQEVSPLSLVLEISLLLL*RSLYRS
Trigger: GCTCCTGTACAGTGACCTCCAGAGGAGCAGCAGTGA...TATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTTGGTGAGGAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp CTGATGTCCGCTTTTCCTCACCAAGCCAAGAAGTCTCCCCACTATCTCTGGTCTCCATTCCCGCTGGCTTaGAGGACAGTGAAGAAAACG +
Preference number: 4 (lower is better)
Translates to: LMSAFPHQAKKSPHYLWSPFPLA*RTVKKT
Trigger: CGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAATGG...AGACCAGAGATAGTGGGGAGACTTCTTGGCTTGGTGAGGAAAAGCGGACATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCTGAGCATTTGAGTCTGCGATGTAATCGTCCGTaGCCTCATCTTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: VLEIRPGFRKSWSEHLSLRCNRP*PHLDTG
Trigger: GCCTGTGTCAAGATGAGGTCACGGACGATTACATCG...CAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGGAGCATCGCATCGCTTaGTCACTGCTGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWEHRIA*SLLLLW
Trigger: CCAGAGGAGCAGCAGTGAGCAAGCGATGCGATGCTC...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTGGATGGAGAGCACTGTaGCTAGTATCCAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LAPSLQQVGTVSGLSLSVGWRAL*LVSRCP
Trigger: TGGGCATCTGGATACTAGCCACAGTGCTCTCCATCC...AACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTACCATCTGGGCCACCTaGATGGTGATAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFTIWAT*MVIKAS
Trigger: GGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGT...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp CCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGCAGAAGAGTCGCCTATaGGGAGAAGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PFTPAGGNSFWTFTFSFWQKSRL*GEGGGG
Trigger: ACCACCACCACCTTCTCCCCATAGGCGACTCTTCTG...CCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
3UTR CAA 72 bp TCACCAAGCCAAGAAGTCTCCCCACTATCTCTGGTCTaGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPSQEVSPLSLV*EIRPGFRKSWS
Trigger: AGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTTGTTGCGCTCAAAGTTaGGTGCCTGGAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVCCAQS*VPGAGC
Trigger: GCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACA...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp AAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGCAGCACGCTTTTCATTaGTTTCCCCAGGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: KPRSLPTISGLGDKAWFSQHAFH*FPQVHD
Trigger: GTCATGGACCTGGGGAAACCAATGAAAAGCGTGCTG...CGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGGGTGGGAACAGTTTCTaGACTTTCACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLWEARRFIQRTLQATPTGGNSF*TFTFSF
Trigger: AAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACC...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTGTAGGAGCATGCCACTaGAGAAGCTCATCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFVGACH*RSSSCR
Trigger: TCTACAAGATGAGCTTCTTCAGTGGCATGCTCCTAC...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTCGTAGCGGTCAATGCTaGTGCAAAGAAGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFRSGQC*CKEVGA
Trigger: TGCTCCTACTTCTTTGCATCAGCATTGACCGCTACG...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTGCAGCTGGAAGACTATaGAGACCACGACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVAAGRL*RPRPQR
Trigger: TCGCTGTGGTCGTGGTCTTCATAGTCTTCCAGCTGC...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTAGTGGAGCCAAGAGCTaGGTGCATGTCATCCCCACT +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVSGAKS*VHVIPT
Trigger: AGTGGGGATGACATGCACTCAGCTCTTGGCTCCACT...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp AAGCCAAGAAGTCTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGCTTCACTCCAGCAGGTaGGAACAGTTTCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: KPRSLPTISGLGDKAWFSLHSSR*EQFLDF
Trigger: AAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG...CGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAGACTTCTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACCAGCACGCTTTTCATTaGTTTCCCTTCCTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHQHAFH*FPFLLN
Trigger: ATTTAGGAGGAAGGGAAACCAATGAAAAGCGTGCTG...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR TCA 90 bp GTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCTGAGCATTTGAGTCTGTGTAGATGGCAAAGATaGGCTTGCAAAAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: VLEIRPGFRKSWSEHLSLCRWQR*ACKSGH
Trigger: GTGTCCACTTTTGCAAGCTCATCTTTGCCATCTACA...CAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTTGGCTTGGAGGACAGTaGAGAAAACGATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EHEERFSVPVTKNKEQARWLGGQ*RKRWRE
Trigger: CTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCA...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp ATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTTCAGAGGTGTGGGTAAAATGTTaGTCTCTTAACGAATCGAAA +
Preference number: 4 (lower is better)
Translates to: IPAGLEDSEENDGGRGSEVWVKC*SLNESK
Trigger: TTTCGATTCGTTAAGAGAGCAACATTTTACCCACAC...CTCTGAACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTAAGCCGATCACCATCTaGGCCACCTGGATGGTGATA +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVKPITI*ATWMVI
Trigger: TATCACCATCCAGGTGGCCCAGATGGTGATCGGCTT...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTTCCGTGACCTCATCTTaGCACAGGCATACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVSVTSS*HRHTWK
Trigger: TTTCCAGGTATGCCTGTGTCAAGATGAGGTCACGGA...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR TCA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTCGTAGCGGTCAATGCTaGTGCAAAGAAGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EHEERFSVPVTKNKEQARRSGQC*CKEVGA
Trigger: TGCTCCTACTTCTTTGCATCAGCATTGACCGCTACG...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTGATGTCCTGAGTCATTaGATCTGCTCCCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVDVLSH*ICSLSP
Trigger: TGGGGATAGGGAGCAGATGCAATGACTCAGGACATC...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTCCTCACCAAGCCAAGAAGTGTAGTCCACTGTaGTGTTGTCTCCGATGTAAT +
Preference number: 4 (lower is better)
Translates to: GSESLFDQLMSAFPHQAKKCSPL*CCLRCN
Trigger: ATTACATCGGAGACAACACCACAGTGGACTACACTT...CTTGGCTTGGTGAGGAAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp CATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTGGTGGGAACAGTTTCTaGACTTTCACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLSLWEARRFIQRTLQATGGNSF*TFTFSF
Trigger: AAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACC...AGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGCTTCACTCCAGCAGGTaGGAACAGTTTCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWLHSSR*EQFLDF
Trigger: AAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CCA 90 bp GTTGCTCTCTTAACGAATCGAAAGCAGAACATGAGGAGAGGTTTTCAGTCCCTGGGTTTTCGGAAGAGCTaGTCTGAGCATTTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VALLTNRKQNMRRGFQSLGFRKS*SEHLSL
Trigger: CAGACTCAAATGCTCAGACCAGCTCTTCCGAAAACC...CAGGGACTGAAAACCTCTCCTCATGTTCTGCTTTCGATTCGTTAAGAGAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR GCA 90 bp CTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTTAGGGATAAAGGCCTCCACATaGTCTGTGATGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LQQVGTVSGLSLSVFGLGIKAST*SVMREH
Trigger: ATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTAT...CCCTAAACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR GCA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTATAAAGGCCTCCACATaGTCTGTGATGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EHEERFSVPVTKNKEQARIKAST*SVMREH
Trigger: ATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTAT...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR TCA 90 bp TGTTGTTTCCTCAAGGGAAAACTTTATCTGTGTGTGGGTAAAATGTTGCTCTCTTCCGTGACCTCATCTTaGCACAGGCATACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CCFLKGKLYLCVGKMLLSSVTSS*HRHTWK
Trigger: TTTCCAGGTATGCCTGTGTCAAGATGAGGTCACGGA...AGAGAGCAACATTTTACCCACACACAGATAAAGTTTTCCCTTGAGGAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CCA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTAACTTTATCTGTGTGTaGGTAAAATGTTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFNFICV*VKCCSL
Trigger: AAGAGAGCAACATTTTACCCACACACAGATAAAGTT...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS GCA 90 bp GTGGTGGTGGTCTCGGCCTCCACACTCATGGAGGAGCGCCGGATGTaGCGACAGGAAGACCACTGCCGGAGCTGCTCCTGGCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VVVVSASTLMEERRM*RQEDHCRSCSWLRQ
Trigger: CTGCCTCAGCCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 90 bp TCCACACTCATGGAGGAGCGCCGGATGTGCCGACAGGAAGACCACTaGCGGAGCTGCTCCTGGCTGAGGCAGCCCAGGTCCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: STLMEERRMCRQEDH*RSCSWLRQPRSLKS
Trigger: GCTCTTCAAGGACCTGGGCTGCCTCAGCCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTCCATGAGTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 90 bp TCGCCTATGGGGAGAAGGTGGTGGTGGTCTCGGCCTCCACACTCATaGAGGAGCGCCGGATGTGCCGACAGGAAGACCACTGCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPMGRRWWWSRPPHS*RSAGCADRKTTAGA
Trigger: AGCTCCGGCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCCACTCCCACGCCCCTaGCACTCACCCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLPLPRP*HSPSLA
Trigger: GGCCAAGGAGGGTGAGTGCAAGGGGCGTGGGAGTGG...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 90 bp CCTCTAGTCCAGGCAGAAGAGTCGCCTATGGGGAGAAGGTGGTGGTaGTCTCGGCCTCCACACTCATGGAGGAGCGCCGGATGTGCCGAC +
Preference number: 5 (lower is better)
Translates to: PLVQAEESPMGRRWW*SRPPHSWRSAGCAD
Trigger: GTCGGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTGGACTAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 90 bp GTCCCTCTAGTCCAGGCAGAAGAGTCGCCTATGGGGAGAAGGTGGTaGTGGTCTCGGCCTCCACACTCATGGAGGAGCGCCGGATGTGCC +
Preference number: 5 (lower is better)
Translates to: VPLVQAEESPMGRRW*WSRPPHSWRSAGCA
Trigger: GGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTGGACTAGAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 90 bp GAGGTCCCTCTAGTCCAGGCAGAAGAGTCGCCTATGGGGAGAAGGTaGTGGTGGTCTCGGCCTCCACACTCATGGAGGAGCGCCGGATGT +
Preference number: 5 (lower is better)
Translates to: EVPLVQAEESPMGRR*WWSRPPHSWRSAGC
Trigger: ACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTGGACTAGAGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 90 bp TCCTCAGGGGCTCTAACCGGCCCTGAGGATGAAGCCCCTGATGCTTaGCCTGGCAGTCCAGTCCTCCGCTGTCCACTCAAAGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SSGALTGPEDEAPDA*PGSPVLRCPLKEGF
Trigger: GAAGCCCTCTTTGAGTGGACAGCGGAGGACTGGACTGCCAGGCCAAGCATCAGGGGCTTCATCCTCAGGGCCGGTTAGAGCCCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR CAA 90 bp GAGGGCGACGCGGCAAGTGAGGGGATGAGTGTGCTTTTAGGGCGGCGTGGCAGCAGATCGTTGCGGAACTaGACGCCGATGAAGGCGTAC +
Preference number: 5 (lower is better)
Translates to: EGDAASEGMSVLLGRRGSRSLRN*TPMKAY
Trigger: GTACGCCTTCATCGGCGTCAAGTTCCGCAACGATCT...GCTGCCACGCCGCCCTAAAAGCACACTCATCCCCTCACTTGCCGCGTCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACCACTCCCACGCCCCTaGCACTCACCCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGPLPRP*HSPSLA
Trigger: GGCCAAGGAGGGTGAGTGCAAGGGGCGTGGGAGTGG...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCACCCACACAGGACAGCTaGCTGATGAGAAGGACGCGG +
Preference number: 5 (lower is better)
Translates to: EARRFIQRTLQATPTPLAPTQDS*LMRRTR
Trigger: CCGCGTCCTTCTCATCAGCAAGCTGTCCTGTGTGGG...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp AGAACAAAGAACAAGCTCGTGGGCCTTGGGCGGCCACTGTCACCCTCCCCGCCCATCACCTTGATGGCCTaGTTGCGCTCAAAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: RTKNKLVGLGRPLSPSPPITLMA*LRSKLR
Trigger: ACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGAT...GGGCGGGGAGGGTGACAGTGGCCGCCCAAGGCCCACGAGCTTGTTCTTTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGGTGCTACTGGTGATGTaGAAGTTGGCCACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLVLLVM*KLATVW
Trigger: CCAGACGGTGGCCAACTTCAACATCACCAGTAGCAC...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGGGATGTCCTGAGTCATaGCATCTGCTCCCTATCCCC +
Preference number: 5 (lower is better)
Translates to: GRPEGSFRGLFRPLPRPLGCPES*HLLPIP
Trigger: GGGGATAGGGAGCAGATGCAATGACTCAGGACATCC...CAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGAAACACGACCAGCCCATaGCCCAGTAGGCCCACGAAA +
Preference number: 5 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGNTTSP*PSRPTK
Trigger: TTTCGTGGGCCTACTGGGCAATGGGCTGGTCGTGTT...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 90 bp CCGATCACCATCTGGGCCACCTGGATGGTGATAAAGGCCTCCACATaGTCTGTGATGAGAGAGCATCGCATCGCTTGCTCACTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PITIWATWMVIKAST*SVMREHRIACSLLL
Trigger: GAGCAGCAGTGAGCAAGCGATGCGATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGTGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS CCA 90 bp TCTGTGATGAGAGAGCATCGCATCGCTTGCTCACTGCTGCTCCTCTaGAGGTCACTGTACAGGAGCTCTGGGATGGAGAGCACTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SVMREHRIACSLLLL*RSLYRSSGMESTVA
Trigger: AGCCACAGTGCTCTCCATCCCAGAGCTCCTGTACAGTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGATGCGATGCTCTCTCATCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS CCA 90 bp ATGGCCAGCAGGGGGACCAGAAAGCCGATCACCATCTGGGCCACCTaGATGGTGATAAAGGCCTCCACATGCTCTGTGATGAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: MASRGTRKPITIWAT*MVIKASTCSVMREH
Trigger: ATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGTGATCGGCTTTCTGGTCCCCCTGCTGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS-3UTR CAA 90 bp TTGGTTGAGGTAGCTGGGATTGGGGTGAAGCTATCTTCTGGAGCAGGGGCTTGCTTGTTGCGCTCAAAGTaGCGTGCCTGGAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LVEVAGIGVKLSSGAGACLLRSK*RAWSRV
Trigger: CACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAA...GCAAGCCCCTGCTCCAGAAGATAGCTTCACCCCAATCCCAGCTACCTCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGCCCCTTGCAAGCTTGAAGAGATCGTaGCGGAACTTGACGCCGATG +
Preference number: 5 (lower is better)
Translates to: EARRFIQRTLQATPTPLASLKRS*RNLTPM
Trigger: CATCGGCGTCAAGTTCCGCAACGATCTCTTCAAGCT...TGCAAGGGGCGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 90 bp ATAAAGGCCTCCACATGCTCTGTGATGAGAGAGCATCGCATCGCTTaGTCACTGCTGCTCCTCTGGAGGTCACTGTACAGGAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: IKASTCSVMREHRIA*SLLLLWRSLYRSSG
Trigger: CCCAGAGCTCCTGTACAGTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGATGCGATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS-3UTR CAA 90 bp CACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTACAGCGATGATCACCTaGATGGCCTTGTTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: HSPSLAPSLQQVGTVSGLTAMIT*MALLRS
Trigger: TGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGT...AAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp ATTCCCGCTGGCTTGGAGGACAGTGAAGAAAACGATGGAGGGAGGGGTTCAGAGGTGCTACTGGTGATGTaGAAGTTGGCCACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: IPAGLEDSEENDGGRGSEVLLVM*KLATVW
Trigger: CCAGACGGTGGCCAACTTCAACATCACCAGTAGCAC...CTCTGAACCCCTCCCTCCATCGTTTTCTTCACTGTCCTCCAAGCCAGCGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp CATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTGCGTACAAGAAAGGGTaGACGCAGCAGCGGACGCAG +
Preference number: 5 (lower is better)
Translates to: HLSLWEARRFIQRTLQATAYKKG*TQQRTQ
Trigger: CTGCGTCCGCTGCTGCGTCAACCCTTTCTTGTACGC...AGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTGCCCAGAGTGTGGCTTaGATCACGCGGAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WPLHSSRWEQFLDFHFQFAQSVA*ITRRQL
Trigger: CAGCTGCCTCCGCGTGATCAAAGCCACACTCTGGGC...AAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp AGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTCCCACGATCACCTTGATGGCCTaGTTGCGCTCAAAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: SLWEARRFIQRTLQATPTITLMA*LRSKLR
Trigger: ACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGAT...CGTGGGAGTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTCTGGTGATGTTGAAGTaGGCCACCGTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WPLHSSRWEQFLDFHFQFLVMLK*ATVWAR
Trigger: CCTGGCCCAGACGGTGGCCAACTTCAACATCACCAG...AAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTCTGGTGATGTTGAAGTaGGCCACCGTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAPSLQQVGTVSGLSLSVLVMLK*ATVWAR
Trigger: CCTGGCCCAGACGGTGGCCAACTTCAACATCACCAG...AACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TTGCACTCACCCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGAGTAGGCGATGTTGAGTaGCTTACTGAGCTCACAGGT +
Preference number: 5 (lower is better)
Translates to: LHSPSLAPSLQQVGTVSGVGDVE*LTELTG
Trigger: ACCTGTGAGCTCAGTAAGCAACTCAACATCGCCTAC...TCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGGGTGAGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTGCGTACAAGAAAGGGTaGACGCAGCAGCGGACGCAG +
Preference number: 5 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFAYKKG*TQQRTQ
Trigger: CTGCGTCCGCTGCTGCGTCAACCCTTTCTTGTACGC...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS GCA 90 bp CACAGCGATGATCACCTTGATGGCCTTGTTGCGCTCAAAGTTGCGTaGCTGGAGCAGGGTGCGGATGATGACAAGGTAACAGAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: HSDDHLDGLVALKVA*LEQGADDDKVTEAH
Trigger: ATGAGCTTCTGTTACCTTGTCATCATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GCATTTGAGTCTGTGGGAGGCCAGAAGGTTCATTCAGAGGACTCTTCAGGCCACTTCCGCACGTCCTTCTaGGAGCACAAAGACTCGAAC +
Preference number: 5 (lower is better)
Translates to: AFESVGGQKVHSEDSSGHFRTSF*EHKDSN
Trigger: GTTCGAGTCTTTGTGCTCCAAGAAGGACGTGCGGAA...GTGGCCTGAAGAGTCCTCTGAATGAACCTTCTGGCCTCCCACAGACTCAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp CCTCCTTGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTACAGCGATGATCACCTaGATGGCCTTGTTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: PPWPLHSSRWEQFLDFHFTAMIT*MALLRS
Trigger: TGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGT...AAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TGGCCCCTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTGTCCGTGACCTCATCTaGACACAGGCATACCTGGAA +
Preference number: 5 (lower is better)
Translates to: WPLHSSRWEQFLDFHFQFVRDLI*TQAYLE
Trigger: TTCCAGGTATGCCTGTGTCAAGATGAGGTCACGGAC...AAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp CTCCCCACTATCTCTGGTCTTGGAGATAAGGCCTGGTTTTCGGAAGAGCTGGTCATGGCAAAGATGAGCTaGCAAAAGTGGACACCGAAG +
Preference number: 5 (lower is better)
Translates to: LPTISGLGDKAWFSEELVMAKMS*QKWTPK
Trigger: CTTCGGTGTCCACTTTTGCAAGCTCATCTTTGCCAT...GACCAGCTCTTCCGAAAACCAGGCCTTATCTCCAAGACCAGAGATAGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp GAACATGAGGAGAGGTTTTCAGTCCCTGTGACAAAGAACAAAGAACAAGCTCGTCCCACACAGGACAGCTaGCTGATGAGAAGGACGCGG +
Preference number: 5 (lower is better)
Translates to: EHEERFSVPVTKNKEQARPTQDS*LMRRTR
Trigger: CCGCGTCCTTCTCATCAGCAAGCTGTCCTGTGTGGG...ACGAGCTTGTTCTTTGTTCTTTGTCACAGGGACTGAAAACCTCTCCTCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGTTGTTGCGCTCAAAGTaGCGTGCCTGGAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWLLRSK*RAWSRV
Trigger: CACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAA...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTAGATCGTTGCGGAACTaGACGCCGATGAAGGCGTAC +
Preference number: 5 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFRSLRN*TPMKAY
Trigger: GTACGCCTTCATCGGCGTCAAGTTCCGCAACGATCT...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp AACGATGGAGGGAGGGGTTCAGAGAGTTTGTTTGACCAGCTGATGTCCGCTTTTAGCTTGAAGAGATCGTaGCGGAACTTGACGCCGATG +
Preference number: 5 (lower is better)
Translates to: NDGGRGSESLFDQLMSAFSLKRS*RNLTPM
Trigger: CATCGGCGTCAAGTTCCGCAACGATCTCTTCAAGCT...AAAAGCGGACATCAGCTGGTCAAACAAACTCTCTGAACCCCTCCCTCCATCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTGTAGTCCTGCTGCGATaGGACCCTGTTGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFVVLLR*DPVATE
Trigger: CTCTGTTGCAACAGGGTCCAATCGCAGCAGGACTAC...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS-3UTR CAA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTGTCCGTGACCTCATCTaGACACAGGCATACCTGGAA +
Preference number: 5 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFVRDLI*TQAYLE
Trigger: TTCCAGGTATGCCTGTGTCAAGATGAGGTCACGGAC...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTTTCCGCACGTCCTTCTaGGAGCACAAAGACTCGAAC +
Preference number: 5 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFFRTSF*EHKDSN
Trigger: GTTCGAGTCTTTGTGCTCCAAGAAGGACGTGCGGAA...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGGGATGTCCTGAGTCATaGCATCTGCTCCCTATCCCC +
Preference number: 5 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWGCPES*HLLPIP
Trigger: GGGGATAGGGAGCAGATGCAATGACTCAGGACATCC...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp CTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTTAGGGGCCATTCCCGCTGGCTaGGAGGACAGTGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LQQVGTVSGLSLSVFGLGAIPAG*EDSEEN
Trigger: GTTTTCTTCACTGTCCTCCAAGCCAGCGGGAATGGC...CCCTAAACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp GCCTCTGTTTCCCAGTGTTGTCTGTCTGGTGTTAGCTTATCAGCCCTGTCTTTTAGGTCCTTGAAGAGCTaGAAGAGATCGTTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: ASVSQCCLSGVSLSALSFRSLKS*KRSLRN
Trigger: GTTCCGCAACGATCTCTTCAAGCTCTTCAAGGACCT...AAAAGACAGGGCTGATAAGCTAACACCAGACAGACAACACTGGGAAACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp CTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTTAGGGGTAGGCGATGTTGAGTaGCTTACTGAGCTCACAGGT +
Preference number: 5 (lower is better)
Translates to: LQQVGTVSGLSLSVFGLGVGDVE*LTELTG
Trigger: ACCTGTGAGCTCAGTAAGCAACTCAACATCGCCTAC...CCCTAAACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TCAGTTTTTGGTTTAGGGGACAATAGCCTCTGTTTCCCAGTGTTGTCTGTCTGGAGGTCCTTGAAGAGCTaGAAGAGATCGTTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: SVFGLGDNSLCFPVLSVWRSLKS*KRSLRN
Trigger: GTTCCGCAACGATCTCTTCAAGCTCTTCAAGGACCT...CCAGACAGACAACACTGGGAAACAGAGGCTATTGTCCCCTAAACCAAAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp TGTTGTTTCCTCAAGGGAAAACTTTATCTGTGTGTGGGTAAAATGTTGCTCTCTCCCCTGACATTTCCCTaGTCCTCTCCTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: CCFLKGKLYLCVGKMLLSPLTFP*SSPPIP
Trigger: TGGGATGGGAGGAGAGGACAAGGGAAATGTCAGGGG...AGAGAGCAACATTTTACCCACACACAGATAAAGTTTTCCCTTGAGGAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS-3UTR CAA 90 bp CTTCACTCCAGCAGGTGGGAACAGTTTCTGGACTTTCACTTTCAGTTTTTGGTTATGGCAAAGATGAGCTaGCAAAAGTGGACACCGAAG +
Preference number: 5 (lower is better)
Translates to: LHSSRWEQFLDFHFQFLVMAKMS*QKWTPK
Trigger: CTTCGGTGTCCACTTTTGCAAGCTCATCTTTGCCAT...AACCAAAAACTGAAAGTGAAAGTCCAGAAACTGTTCCCACCTGCTGGAGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS-3UTR CAA 90 bp GTTTCCTCAAGGGAAAACTTTATCTGTGTGTGGGTAAAATGTTGCTCTCTTAACAGGGGTTCAGAGAGTTaGTTTGACCAGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: VSSRENFICVWVKCCSLNRGSES*FDQLMS
Trigger: GGACATCAGCTGGTCAAACAAACTCTCTGAACCCCT...GTTAAGAGAGCAACATTTTACCCACACACAGATAAAGTTTTCCCTTGAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246657.2
CDS GCA 72 bp CGCCGGATGTGCCGACAGGAAGACCACTGCCGGAGCTaGTCCTGGCTGAGGCAGCCCAGGTCCTTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RRMCRQEDHCRS*SWLRQPRSLKS
Trigger: GCTCTTCAAGGACCTGGGCTGCCTCAGCCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCGGCACATCCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 72 bp GTCTCGGCCTCCACACTCATGGAGGAGCGCCGGATGTaGCGACAGGAAGACCACTGCCGGAGCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSASTLMEERRM*RQEDHCRSCSW
Trigger: CCAGGAGCAGCTCCGGCAGTGGTCTTCCTGTCGGCACATCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 72 bp CAGGCAGAAGAGTCGCCTATGGGGAGAAGGTGGTGGTaGTCTCGGCCTCCACACTCATGGAGGAGCGCCGGA +
Preference number: 6 (lower is better)
Translates to: QAEESPMGRRWW*SRPPHSWRSAG
Trigger: TCCGGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 72 bp GTCCAGGCAGAAGAGTCGCCTATGGGGAGAAGGTGGTaGTGGTCTCGGCCTCCACACTCATGGAGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: VQAEESPMGRRW*WSRPPHSWRSA
Trigger: GGCGCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 72 bp CTAGTCCAGGCAGAAGAGTCGCCTATGGGGAGAAGGTaGTGGTGGTCTCGGCCTCCACACTCATGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LVQAEESPMGRR*WWSRPPHSWRS
Trigger: GCTCCTCCATGAGTGTGGAGGCCGAGACCACCACCACCTTCTCCCCATAGGCGACTCTTCTGCCTGGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CCA 72 bp GCTCTAACCGGCCCTGAGGATGAAGCCCCTGATGCTTaGCCTGGCAGTCCAGTCCTCCGCTGTCCACTCAAA +
Preference number: 6 (lower is better)
Translates to: ALTGPEDEAPDA*PGSPVLRCPLK
Trigger: TTTGAGTGGACAGCGGAGGACTGGACTGCCAGGCCAAGCATCAGGGGCTTCATCCTCAGGGCCGGTTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS CAA 72 bp CCAGCCTGCGCTCGGGCATTTGTAGTCCTGCTGCGATaGGACCCTGTTGCAACAGAGCTCCCCACCGCTCAT +
Preference number: 6 (lower is better)
Translates to: PACARAFVVLLR*DPVATELPTAH
Trigger: ATGAGCGGTGGGGAGCTCTGTTGCAACAGGGTCCAATCGCAGCAGGACTACAAATGCCCGAGCGCAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS CAA 90 bp CCCTCGTTCCCAGCCTGCGCTCGGGCATTTGTAGTCCTGCTGCGATaGGACCCTGTTGCAACAGAGCTCCCCACCGCTCATTCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: PSFPACARAFVVLLR*DPVATELPTAHSPF
Trigger: AAAAGGGGAATGAGCGGTGGGGAGCTCTGTTGCAACAGGGTCCAATCGCAGCAGGACTACAAATGCCCGAGCGCAGGCTGGGAACGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS CCA 72 bp ATGGCCAGCAGGGGGACCAGAAAGCCGATCACCATCTaGGCCACCTGGATGGTGATAAAGGCCTCCACATGC +
Preference number: 6 (lower is better)
Translates to: MASRGTRKPITI*ATWMVIKASTC
Trigger: GCATGTGGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGTGATCGGCTTTCTGGTCCCCCTGCTGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS CAA 72 bp ACCACGACCACAGCGATGATCACCTTGATGGCCTTGTaGCGCTCAAAGTTGCGTGCCTGGAGCAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: TTTTAMITLMAL*RSKLRAWSRVR
Trigger: CCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 90 bp GGCAGCTGGAAGACTATGAAGACCACGACCACAGCGATGATCACCTaGATGGCCTTGTTGCGCTCAAAGTTGCGTGCCTGGAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GSWKTMKTTTTAMIT*MALLRSKLRAWSRV
Trigger: CACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGTCTTCATAGTCTTCCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 90 bp GCGGACGCAGGCCAGGCTGTAGGTGACGTCGTAGGCGATGTTGAGTaGCTTACTGAGCTCACAGGTGCTACTGGTGATGTTGAAGTTGGC +
Preference number: 6 (lower is better)
Translates to: ADAGQAVGDVVGDVE*LTELTGATGDVEVG
Trigger: GCCAACTTCAACATCACCAGTAGCACCTGTGAGCTCAGTAAGCAACTCAACATCGCCTACGACGTCACCTACAGCCTGGCCTGCGTCCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 72 bp AGTCCTCCGCTGTCCACTCAAAGAGGGCTTCCTAGCTaGATTTTCTATTCTGGGGACAGGCAGCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SPPLSTQRGLPS*IFYSGDRQPLS
Trigger: GGACAGCGGCTGCCTGTCCCCAGAATAGAAAATGCAGCTAGGAAGCCCTCTTTGAGTGGACAGCGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579344.1
CDS CCA 72 bp AGGGGGACCAGAAAGCCGATCACCATCTGGGCCACCTaGATGGTGATAAAGGCCTCCACATGCTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: RGTRKPITIWAT*MVIKASTCSVM
Trigger: CATCACAGAGCATGTGGAGGCCTTTATCACCATCCAGGTGGCCCAGATGGTGATCGGCTTTCTGGTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS CAA 72 bp GCGATGATCACCTTGATGGCCTTGTTGCGCTCAAAGTaGCGTGCCTGGAGCAGGGTGCGGATGATGACAAGG +
Preference number: 6 (lower is better)
Translates to: AMITLMALLRSK*RAWSRVRMMTR
Trigger: CCTTGTCATCATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 72 bp AAGACCACGACCACAGCGATGATCACCTTGATGGCCTaGTTGCGCTCAAAGTTGCGTGCCTGGAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: KTTTTAMITLMA*LRSKLRAWSRV
Trigger: CACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 72 bp TCCACATGCTCTGTGATGAGAGAGCATCGCATCGCTTaGTCACTGCTGCTCCTCTGGAGGTCACTGTACAGG +
Preference number: 6 (lower is better)
Translates to: STCSVMREHRIA*SLLLLWRSLYR
Trigger: CCTGTACAGTGACCTCCAGAGGAGCAGCAGTGAGCAAGCGATGCGATGCTCTCTCATCACAGAGCATGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS CAA 90 bp ACTATGAAGACCACGACCACAGCGATGATCACCTTGATGGCCTTGTaGCGCTCAAAGTTGCGTGCCTGGAGCAGGGTGCGGATGATGACA +
Preference number: 6 (lower is better)
Translates to: TMKTTTTAMITLMAL*RSKLRAWSRVRMMT
Trigger: TGTCATCATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGTCTTCATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 90 bp AAGACTATGAAGACCACGACCACAGCGATGATCACCTTGATGGCCTaGTTGCGCTCAAAGTTGCGTGCCTGGAGCAGGGTGCGGATGATG +
Preference number: 6 (lower is better)
Translates to: KTMKTTTTAMITLMA*LRSKLRAWSRVRMM
Trigger: CATCATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGTCTTCATAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS GCA 72 bp ATCTGGGCCACCTGGATGGTGATAAAGGCCTCCACATaGTCTGTGATGAGAGAGCATCGCATCGCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: IWATWMVIKAST*SVMREHRIACS
Trigger: TGAGCAAGCGATGCGATGCTCTCTCATCACAGAGCATGTGGAGGCCTTTATCACCATCCAGGTGGCCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246657.2
ENST00000578085.1
ENST00000579344.1
CDS GCA 72 bp GATCACCTTGATGGCCTTGTTGCGCTCAAAGTTGCGTaGCTGGAGCAGGGTGCGGATGATGACAAGGTAACA +
Preference number: 6 (lower is better)
Translates to: DHLDGLVALKVA*LEQGADDDKVT
Trigger: TGTTACCTTGTCATCATCCGCACCCTGCTCCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS TCA 72 bp AGTCCACTGTGGTGTTGTCTCCGATGTAATCGTCCGTaGCCTCATCTTGACACAGGCATACCCAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: SPLWCCLRCNRP*PHLDTGIPRSM
Trigger: CATGGACCTGGGTATGCCTGTGTCAAGATGAGGTCACGGACGATTACATCGGAGACAACACCACAGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578085.1
CDS CAA 72 bp AAGACTATGAAGACCACGACCACAGCGATGATCACCTaGATGGCCTTGTTGCGCTCAAAGTTGCGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: KTMKTTTTAMIT*MALLRSKLRAW
Trigger: CCAGGCACGCAACTTTGAGCGCAACAAGGCCATCAAGGTGATCATCGCTGTGGTCGTGGTCTTCATAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 72 bp AGGTCCTTGAAGAGCTTGAAGAGATCGTTGCGGAACTaGACGCCGATGAAGGCGTACAAGAAAGGGTTGACG +
Preference number: 6 (lower is better)
Translates to: RSLKSLKRSLRN*TPMKAYKKGLT
Trigger: CGTCAACCCTTTCTTGTACGCCTTCATCGGCGTCAAGTTCCGCAACGATCTCTTCAAGCTCTTCAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1
CDS CAA 72 bp GGTGTTGTCTCCGATGTAATCGTCCGTGACCTCATCTaGACACAGGCATACCTGGAAAATGACAAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GVVSDVIVRDLI*TQAYLENDKES
Trigger: GCTCTCCTTGTCATTTTCCAGGTATGCCTGTGTCAAGATGAGGTCACGGACGATTACATCGGAGACAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246657.2
ENST00000579344.1